hipsycl: add missing c dependency (#50294 )

dlb: add v3.5.1 and v3.5.2 (#50288 )
rmgdft: add v6.2.0 (#50291 )
2025-05-05 08:26:32 +02:00 · 2025-05-04 20:53:57 -07:00 · 2025-05-04 19:59:30 -07:00 · 2025-05-04 19:58:49 -07:00 · 2025-05-04 11:58:02 +02:00 · 2025-05-04 11:31:42 +02:00
11 changed files with 49 additions and 13 deletions
--- a/share/spack/gitlab/cloud_pipelines/stacks/e4s-oneapi/spack.yaml
+++ b/share/spack/gitlab/cloud_pipelines/stacks/e4s-oneapi/spack.yaml
@@ -173,11 +173,11 @@ spack:
  - vtk-m ~openmp                   # +openmp: https://github.com/spack/spack/issues/31830
  - zfp
  # --
-  # - paraview +qt                  # llvm-17.0.6: https://github.com/spack/spack/issues/49625
-  # - py-cinemasci                  # llvm-14.0.6: https://github.com/spack/spack/issues/49625
-  # - visit                         # llvm-17.0.6: https://github.com/spack/spack/issues/49625
+  # - paraview +qt                  # concretize: paraview: Qt support requires GLX on non Windows; llvm-17.0.6: https://github.com/spack/spack/issues/49625
+  # - py-cinemasci                  # py-maturin-1.8.3: rust-lld: error: undefined symbol: _intel_fast_memcpy
+  # - visit                         # vtk-9.2.6: ??
  # --
-  # - chapel ~cuda ~rocm            # llvm-19.1.7: https://github.com/spack/spack/issues/49625
+  # - chapel ~cuda ~rocm            # chapel-2.4.0: KeyError: 'intel-oneapi-compilers': /builds/spack/spack/var/spack/repos/builtin/packages/chapel/package.py:602, in setup_chpl_compilers: env.set("CHPL_HOST_COMPILER", self.compiler_map[self.spec.compiler.name])
  # - cp2k +mpi                     # dbcsr-2.8.0: FAILED: src/CMakeFiles/dbcsr.dir/dbcsr_api.F-pp.f src/CMakeFiles/dbcsr.dir/dbcsr_api.F.o.ddi: 
  # - dealii                        # taskflow@3.7.0: cmake: Taskflow currently supports the following compilers: g++ v7.0 or above, clang++ v6.0 or above
  # - exago +mpi ~ipopt +hiop ~python +raja ^hiop+raja~sparse # raja-0.14.0: RAJA/pattern/kernel/Tile.hpp:174:30: error: no member named 'block_id' in 'IterableTiler<Iterable>'
@@ -185,8 +185,8 @@ spack:
  # - fftx                          # fftx-1.2.0: https://github.com/spack/spack/issues/49621
  # - fpm                           # fpm-0.10.0: /tmp/ifx1305151083OkWTRB/ifxqBG60i.i90: error #6405: The same named entity from different modules and/or program units cannot be referenced.   [TOML_TABLE]; fpm.F90(32048): error #7002: Error in opening the compiled module file.  Check INCLUDE paths.   [FPM_MANIFEST_PREPROCESS]
  # - geopm-runtime                 # concretize: c-blosc2: conflicts with '%oneapi';
-  # - glvis                         # llvm-17.0.6: https://github.com/spack/spack/issues/49625
-  # - gptune ~mpispawn              # llvm-14.0.6: https://github.com/spack/spack/issues/49625
+  - glvis                         # llvm-17.0.6: https://github.com/spack/spack/issues/49625
+  # - gptune ~mpispawn              # py-maturin-1.8.3: rust-lld: error: undefined symbol: __intel_cpu_feature_indicator_x
  # - lbann                         # lbann-0.104: https://github.com/spack/spack/issues/49619
  # - libpressio +bitgrooming +bzip2 ~cuda ~cusz +fpzip +hdf5 +libdistributed +lua +openmp +python +sz +sz3 +unix +zfp # concretize: c-blosc2: conflicts with '%oneapi';
  # - nek5000 +mpi ~visit           # nek5000-19.0: RuntimeError: Cannot build example: short_tests/eddy.
@@ -209,8 +209,8 @@ spack:
  # --
  # - py-jupyterlab                 # py-maturin: rust-lld: error: undefined symbol: _intel_fast_memcpy
  # - py-notebook                   # py-maturin: rust-lld: error: undefined symbol: _intel_fast_memcpy
-  # - py-numba                      # llvm-14.0.6: https://github.com/spack/spack/issues/49625
-  # - py-pandas                     # llvm-14.0.6: https://github.com/spack/spack/issues/49625
+  - py-numba                      # llvm-14.0.6: https://github.com/spack/spack/issues/49625
+  - py-pandas                     # llvm-14.0.6: https://github.com/spack/spack/issues/49625
  # - py-plotly                     # py-maturin: rust-lld: error: undefined symbol: _intel_fast_memcpy

  - aml +level_zero
--- a/var/spack/repos/builtin/packages/binutils/package.py
+++ b/var/spack/repos/builtin/packages/binutils/package.py
@@ -25,7 +25,7 @@ class Binutils(AutotoolsPackage, GNUMirrorPackage):
        "GPL-2.0-or-later AND LGPL-2.1-or-later AND GPL-3.0-or-later AND LGPL-3.0-or-later",
        checked_by="tgamblin",
    )
-
+    version("2.44", sha256="f66390a661faa117d00fab2e79cf2dc9d097b42cc296bf3f8677d1e7b452dc3a")
    version("2.43.1", sha256="becaac5d295e037587b63a42fad57fe3d9d7b83f478eb24b67f9eec5d0f1872f")
    version("2.43", sha256="fed3c3077f0df7a4a1aa47b080b8c53277593ccbb4e5e78b73ffb4e3f265e750")
    version("2.42", sha256="aa54850ebda5064c72cd4ec2d9b056c294252991486350d9a97ab2a6dfdfaf12")
--- a/var/spack/repos/builtin/packages/dlb/package.py
+++ b/var/spack/repos/builtin/packages/dlb/package.py
@@ -21,6 +21,8 @@ class Dlb(AutotoolsPackage):
    license("LGPL-3.0-or-later")

    version("main", branch="main")
+    version("3.5.2", sha256="ec81284f77aa07c1589a91f75ed1c88501beb6c8340f5bcad603c210f5c446d4")
+    version("3.5.1", sha256="32ec884c90220478f9873bf37eb11b536bfc3739d108ba6b29edefb651a10c34")
    version("3.5.0", sha256="df7fe979059998c2199dc4ee3775d623287fcce728be07e2f6657da2314daf6b")
    version("3.4.1", sha256="7c071b75c126f8e77c1a30369348751624d5636edcbd663bf3d41fa04733c894")
    version("3.4", sha256="6091d032c11a094a3ce0bec11c0a164783fdff83cb4ec870c9d8e192410c353a")
--- a/var/spack/repos/builtin/packages/hipsycl/package.py
+++ b/var/spack/repos/builtin/packages/hipsycl/package.py
@@ -38,6 +38,7 @@ class Hipsycl(CMakePackage, ROCmPackage):
    variant("cuda", default=False, description="Enable CUDA backend for SYCL kernels")
    variant("rocm", default=False, description="Enable ROCM backend for SYCL kernels")

+    depends_on("c", type="build")
    depends_on("cxx", type="build")

    depends_on("cmake@3.5:", type="build")
--- a/var/spack/repos/builtin/packages/libiconv/package.py
+++ b/var/spack/repos/builtin/packages/libiconv/package.py
@@ -14,6 +14,7 @@ class Libiconv(AutotoolsPackage, GNUMirrorPackage):

    license("LGPL-2.1-or-later")

+    version("1.18", sha256="3b08f5f4f9b4eb82f151a7040bfd6fe6c6fb922efe4b1659c66ea933276965e8")
    version("1.17", sha256="8f74213b56238c85a50a5329f77e06198771e70dd9a739779f4c02f65d971313")
    version("1.16", sha256="e6a1b1b589654277ee790cce3734f07876ac4ccfaecbee8afa0b649cf529cc04")
    version("1.15", sha256="ccf536620a45458d26ba83887a983b96827001e92a13847b45e4925cc8913178")
--- a/var/spack/repos/builtin/packages/linaro-forge/package.py
+++ b/var/spack/repos/builtin/packages/linaro-forge/package.py
@@ -22,6 +22,9 @@ class LinaroForge(Package):
    maintainers("kenche-linaro")

    if platform.machine() == "aarch64":
+        version(
+            "24.1.3", sha256="e79975611ae17b17481ec6626e9932bd0901cffcc6919bed523e3dc58dddefcd"
+        )
        version(
            "24.1.2", sha256="c3821b2e792d07b1b09f1ca81d1a27590b1bef62d5c48d6f7271debef62b6398"
        )
@@ -100,6 +103,9 @@ class LinaroForge(Package):
            "22.0.4", sha256="f4cb5bcbaa67f9209299fe4653186a2829760b8b16a2883913aa43766375b04c"
        )
    elif platform.machine() == "x86_64":
+        version(
+            "24.1.3", sha256="94ac68bbde8b56897d507c1ed27ff113bc8bf5167a2c513510a7ac7aed139d50"
+        )
        version(
            "24.1.2", sha256="794fed7cb60dd96fd68f0f414f6a8d15920cd2bd5a8795978150ca27c55a547d"
        )
--- a/var/spack/repos/builtin/packages/llvm/package.py
+++ b/var/spack/repos/builtin/packages/llvm/package.py
@@ -55,6 +55,7 @@ class Llvm(CMakePackage, CudaPackage, LlvmDetection, CompilerPackage):
    version("main", branch="main")

    # Latest stable
+    version("20.1.4", sha256="65e3a582c4c684fa707a56ff643427bce3633eceaceae3295d81c0e830f44b89")
    version("20.1.3", sha256="b40c0d185b98c2ee3c0cb2f14cde65a06008b33dfb471cc7ad868f8ca3f7f897")
    version("20.1.2", sha256="9ee597456405ddf4809bcf66a4765137a68a85361347ca2a4bb13d9176e932ab")
    version("20.1.1", sha256="edde69aa3e48a3892a8f01332ff79cfb6179151b42503c4ba77d2cd408b013bf")
@@ -951,6 +952,12 @@ def setup_build_environment(self, env: EnvironmentModifications) -> None:
            # set the SDKROOT so the bootstrap compiler finds its C++ headers
            env.set("SDKROOT", macos_sdk_path())

+        if self.spec.satisfies("%intel-oneapi-compilers"):
+            intel_libs = find_libraries(
+                ["libsvml", "libimf", "libirc"], self.spec["intel-oneapi-runtime"].prefix.lib
+            )
+            env.append_flags("LDFLAGS", intel_libs.ld_flags)
+
    def setup_run_environment(self, env: EnvironmentModifications) -> None:
        if self.spec.satisfies("+clang"):
            env.set("CC", join_path(self.spec.prefix.bin, "clang"))
--- a/var/spack/repos/builtin/packages/mpl/package.py
+++ b/var/spack/repos/builtin/packages/mpl/package.py
@@ -10,12 +10,13 @@ class Mpl(CMakePackage):

    homepage = "https://rabauke.github.io/mpl/html/"
    git = "https://github.com/rabauke/mpl.git"
-    url = "https://github.com/rabauke/mpl/archive/refs/tags/v0.3.0.tar.gz"
+    url = "https://github.com/rabauke/mpl/archive/refs/tags/v0.4.0.tar.gz"
    maintainers("rabauke")

    license("BSD-3-Clause")

    version("develop", branch="master")
+    version("0.4.0", tag="v0.4.0", commit="a7469769a3e183104594252c45c8026d3d6f87ec")
    version("0.3.0", tag="v0.3.0", commit="e6bd4926914127f3609a14474aa4a9c4fabbff0b")
    version("0.2.1", tag="v0.2.1", commit="5bee297b453d7b66a803453bfc6884611a36c4d0")
    version("0.2.0", tag="v0.2.0", commit="f322352c93627c1b91d8efb1c4ee2e4873aed016")
--- a/var/spack/repos/builtin/packages/py-cupy/package.py
+++ b/var/spack/repos/builtin/packages/py-cupy/package.py
@@ -17,6 +17,9 @@ class PyCupy(PythonPackage, CudaPackage, ROCmPackage):
    homepage = "https://cupy.dev/"
    pypi = "cupy/cupy-8.0.0.tar.gz"

+    version("13.4.0", sha256="d4b60e5a1d3b89be40fad0845bb9fc467a653abe8660f752416fd38d24ab7fdb")
+    version("13.3.0", sha256="9a2a17af2b99cce91dd1366939c3805e3f51f9de5046df64f29ccbad3bdf78ed")
+    version("13.2.0", sha256="e4dbd2b2ed4159a5cc0c0f98a710a014950eb2c16eeb455e956128f3b3bd0d51")
    version("13.1.0", sha256="5caf62288481a27713384523623045380ff42e618be4245f478238ed1786f32d")
    version("12.1.0", sha256="f6d31989cdb2d96581da12822e28b102f29e254427195c2017eac327869b7320")
    version("12.0.0", sha256="61ddbbef73d50d606bd5087570645f3c91ec9176c2566784c1d486d6a3404545")
@@ -28,12 +31,16 @@ class PyCupy(PythonPackage, CudaPackage, ROCmPackage):

    variant("all", default=False, description="Enable optional py-scipy, optuna, and cython")

-    depends_on("cxx", type="build")  # generated
+    depends_on("c", type="build")
+    depends_on("cxx", type="build")

    depends_on("python@3.7:", when="@:11", type=("build", "run"))
    depends_on("python@3.8:", when="@12:", type=("build", "run"))
    depends_on("py-setuptools", type="build")
-    depends_on("py-cython@0.29.22:2", type="build")
+    depends_on("py-cython@0.29.22:2", type="build", when="@:13.3")
+    depends_on(
+        "py-cython@3:3.0.10,3.0.12:", type="build", when="@13.4:"
+    )  # 3.0.11 broken likely because of cython#6335, fixed in 3.0.12
    depends_on("py-fastrlock@0.5:", type=("build", "run"))
    depends_on("py-numpy@1.20:1.25", when="@:11", type=("build", "run"))
    depends_on("py-numpy@1.20:1.26", when="@12:", type=("build", "run"))
@@ -47,7 +54,10 @@ class PyCupy(PythonPackage, CudaPackage, ROCmPackage):
    # Based on https://github.com/cupy/cupy/releases
    depends_on("cuda@:11.9", when="@:11 +cuda")
    depends_on("cuda@:12.1", when="@12:12.1.0 +cuda")
-    depends_on("cuda@:12.4", when="@13: +cuda")
+    depends_on("cuda@:12.1", when="@13.0 +cuda")
+    depends_on("cuda@:12.4", when="@13.1:13.2 +cuda")
+    depends_on("cuda@:12.6", when="@13.3 +cuda")
+    depends_on("cuda@:12.8", when="@13.4: +cuda")

    for a in CudaPackage.cuda_arch_values:
        depends_on("nccl +cuda cuda_arch={0}".format(a), when="+cuda cuda_arch={0}".format(a))
--- a/var/spack/repos/builtin/packages/py-torch/package.py
+++ b/var/spack/repos/builtin/packages/py-torch/package.py
@@ -346,6 +346,13 @@ class PyTorch(PythonPackage, CudaPackage, ROCmPackage):
        when="@2.6:",
    )

+    # Fixes 'FindBLAS.cmake' error: unknown command check_function_exists
+    patch(
+        "https://github.com/pytorch/pytorch/pull/145849.patch?full_index=1",
+        sha256="5675ab543b786b8f360de451b27b3eb5d3ce8499d6c1a207f4a854f0c473ab03",
+        when="@:2.6",
+    )
+
    # https://github.com/pytorch/pytorch/issues/90448
    patch(
        "https://github.com/pytorch/pytorch/pull/97270.patch?full_index=1",
--- a/var/spack/repos/builtin/packages/rmgdft/package.py
+++ b/var/spack/repos/builtin/packages/rmgdft/package.py
@@ -16,6 +16,7 @@ class Rmgdft(CMakePackage, CudaPackage):
    tags = ["ecp", "ecp-apps"]
    version("master", branch="master")
    version("develop", branch="develop")
+    version("6.2.0", tag="v6.2.0", commit="c00f21741c40aacebf4767adb1f274c52bfc82ea")
    version("6.1.0", tag="v6.1.0", commit="4dd5862725006b35d3118705197f89f13b24b858")
    version("5.4.0", tag="v5.4.0", commit="471251b191abb5f6ffdca4333c1fcb2add3c52f2")
    version("5.3.1", tag="v5.3.1", commit="dd6217ed82a8fe335acd0c030023b539d1be920a")
Author	SHA1	Message	Date
David--Cléris Timothée	fcbe8c50cd	hipsycl: add missing c dependency (#50294 )	2025-05-05 08:26:32 +02:00
Victor Lopez Herrero	37de90c98c	dlb: add v3.5.1 and v3.5.2 (#50288 )	2025-05-04 20:53:57 -07:00
Paul R. C. Kent	5ccd9dc64b	rmgdft: add v6.2.0 (#50291 )	2025-05-04 19:59:30 -07:00
Heiko Bauke	1f59ada2c2	mpl: add v0.4.0 (#50295 )	2025-05-04 19:58:49 -07:00
YI Zeping	a8a402115b	add binutils 2.44 (#50267 )	2025-05-04 11:58:02 +02:00
Paul R. C. Kent	c2f3539a5e	llvm: add v20.1.4 (#50283 )	2025-05-04 11:31:42 +02:00
RichardBuntLinaro	cdeb67ec02	linaro-forge: add v24.1.3 (#50268 )	2025-05-02 08:01:44 -07:00
Till Ehrengruber	2ddd8cd1aa	py-cupy: add v13.2.0, v13.3.0, v13.4.0 (#50076 ) * Add cupy 13.4.0, 13.3.0, 13.2.0 * [@spackbot] updating style on behalf of tehrengruber * Update var/spack/repos/builtin/packages/py-cupy/package.py Co-authored-by: Mikael Simberg <mikael.simberg@iki.fi> * Update var/spack/repos/builtin/packages/py-cupy/package.py Co-authored-by: Mikael Simberg <mikael.simberg@iki.fi> --------- Co-authored-by: tehrengruber <tehrengruber@users.noreply.github.com> Co-authored-by: Mikael Simberg <mikael.simberg@iki.fi>	2025-05-02 13:18:59 +02:00
Mike Nolta	5b352c3088	py-torch: patch FindBLAS.cmake (#50273 ) Pulls in the patch from https://github.com/pytorch/pytorch/pull/145849 to fix the following error: CMake Error at cmake/Modules/FindBLAS.cmake:85 (check_function_exists): Unknown CMake command "check_function_exists".	2025-05-02 10:39:19 +02:00
Veselin Dobrev	95c26245c1	Fix the LLVM build when using intel compilers (#50226 ) * [llvm] Fix the LLVM build when using intel compilers * [@spackbot] updating style on behalf of v-dobrev * e4s oneapi ci stack: re-enable specs disabled due to llvm%oneapi issue #49625 * disable paraview * disable failing oneapi specs * disable additional failing oneapi spec --------- Co-authored-by: eugeneswalker <eugenesunsetwalker@gmail.com>	2025-05-01 16:46:48 -07:00
YI Zeping	6a0e03b81c	update libiconv to make gcc-15 happy (#50270 )	2025-05-01 13:23:29 -07:00