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98 Commits

Author SHA1 Message Date
Harmen Stoppels
6467ddefa3 Set version to v0.21.3 2024-10-02 20:05:46 +02:00
Massimiliano Culpo
f0fee0c223 Add compatibility of sequoia with previous macOS versions (#45127)
* Add compatibility of sequoia with previous macOS versions

* Add compatibility of sequoia with previous macOS versions
2024-10-02 20:05:46 +02:00
Massimiliano Culpo
4668616f55 ASP-based solver: update os compatibility for macOS (#43862) 2024-10-02 20:05:46 +02:00
Adam J. Stewart
280a77424d Add support for macOS Sequoia (#45018) 2024-10-02 20:05:46 +02:00
Harmen Stoppels
71fc3e74bd archspec: revert f2c8cdd1bc532f6e55209ef8112f79c5565f082d 2024-10-02 20:05:46 +02:00
Massimiliano Culpo
80fbef84bd Bump archspec to latest commit (#46445)
This should fix an issue with Neoverse XX detection

Signed-off-by: Massimiliano Culpo <massimiliano.culpo@gmail.com>
2024-10-02 20:05:46 +02:00
Massimiliano Culpo
bd9186038a Update archspec to v0.2.5-dev (7e6740012b897ae4a950f0bba7e9726b767e921f) (#45721) 2024-10-02 20:05:46 +02:00
Massimiliano Culpo
4da21d8f60 Update vendored archspec to v0.2.4 (#44005) 2024-10-02 20:05:46 +02:00
Massimiliano Culpo
581a339cf9 Update archspec to v0.2.3 (#42854) 2024-10-02 20:05:46 +02:00
Harmen Stoppels
45f673b822 remove macos-11: it no longer exists 2024-10-02 20:05:46 +02:00
Harmen Stoppels
4a9a5b6eed Unit tests: skip tests that intermittently fail on Windows (#42909) 2024-10-02 20:05:46 +02:00
Massimiliano Culpo
a2b92822d4 Add macos-14 as a runner (Apple M1) (#42728)
* Add macos-14 as a runner (Apple M1)

* Mark a test xfail

We need to check later if this test needs modifications
on Apple Silicon chips.

---------

Co-authored-by: Harmen Stoppels <me@harmenstoppels.nl>
Co-authored-by: alalazo <alalazo@users.noreply.github.com>
2024-10-02 20:05:46 +02:00
Harmen Stoppels
0b79ead099 tests: fix wrong install name (#46711) 2024-10-02 20:05:46 +02:00
Todd Gamblin
8fe02b8d50 bugfix: make test_requires_directive work on more platforms (#41943)
Literal compiler config in `test_requires_directive` specifically lists `target:
x86_64`, but it doesn't need to, and the unnecessary target makes the test fail on
non-`x86_64` machines.

- [x] Remove target from config yaml in `test_requires_directive`
2024-10-02 20:05:46 +02:00
Harmen Stoppels
3530e44c02 url join: fix oci scheme (#46483)
* url.py: also special case oci scheme in join

* avoid fetching keys from oci mirror
2024-10-02 20:05:46 +02:00
Harmen Stoppels
532d844f26 spack.util.url: fix join breakage in python 3.12.6 (#46453) 2024-10-02 20:05:46 +02:00
Harmen Stoppels
907238a7e8 directives: forward compat for c, cxx, fortran deps 2024-10-02 20:05:46 +02:00
Harmen Stoppels
ed816d3f0c Add pkg- prefix to builtin.mock a b c d ... (#45205) 2024-10-02 20:05:46 +02:00
Massimiliano Culpo
d2096e8fc1 Allow unit test to work on Apple M1/M2 (#43363) 2024-10-02 20:05:46 +02:00
Harmen Stoppels
0c766f2e9b Set version to v0.21.3.dev0 2024-10-02 20:05:46 +02:00
Massimiliano Culpo
89319413d5
Update CHANGELOG and set version to v0.21.2 2024-03-03 16:02:50 +01:00
Axel Huebl
a6ef73f7f2
Fix mgard: OpenMP on AppleClang (#42933)
macOS AppleClang does not provide OpenMP by default with XCode.
Use LLVM's OpenMP to fix compile errors of mgard with OpenMP (default).
2024-03-03 16:02:49 +01:00
Adam J. Stewart
4a84039795
py-transformers: add v4.35.2 (#41266) 2024-03-02 21:09:49 +01:00
Alec Scott
e5f4c6ad75
rust: add v1.75.0 & v1.74.0, merge related variants into +dev, add rust-analyzer (#41903)
* Add rust-analyzer as variant to rust build

* Expose cargo module only when +cargo

* rust: add v1.74.0 and v1.75.0 and remove variants in favor of +dev

* [@spackbot] updating style on behalf of alecbcs

* Fix variant typo

---------

Co-authored-by: alecbcs <alecbcs@users.noreply.github.com>
2024-03-01 21:01:52 +01:00
Alec Scott
c0c66a0fed
rust: add v1.73.0 and add support for external openssl certs (#41161)
Co-authored-by: Tom Scogland <scogland1@llnl.gov>
2024-03-01 21:01:51 +01:00
Massimiliano Culpo
3d73193ecc Fix style tests for backports 2024-02-29 11:35:38 +01:00
Massimiliano Culpo
eb27ee7ae8 ASP-based solver: fix issue with conditional requirements and trigger conditions (#42566)
The lack of a rule to avoid enforcing requirements on multi-valued variants, when the condition activating the environment was not met, resulted in multiple optimal solutions. The fix is to prevent imposing a requirement if the when= rule activating it is not met.
2024-02-29 11:35:38 +01:00
Harmen Stoppels
2883559b49 compilers: fixup order of arguments to satisfies (#42682) 2024-02-29 11:35:38 +01:00
Massimiliano Culpo
7ce9f621d9 Fix copyright year for CI 2024-02-29 11:35:38 +01:00
Matthew Whitlock
0616290c7f Update packages_yaml.rst (#42438)
Fix an incorrect example.
2024-02-29 11:35:38 +01:00
Greg Becker
9963e2a20c Fix using sticky variants in externals (#42253) 2024-02-29 11:35:38 +01:00
Harmen Stoppels
cb4312996c repo.py: pass package name not fully qualified package name (#42217) 2024-02-29 11:35:38 +01:00
Harmen Stoppels
b107de072b oci: use pickleable errors (#42160) 2024-02-29 11:35:38 +01:00
Harmen Stoppels
dd58e922e7 oci: only push in parallel when forking (#42143) 2024-02-29 11:35:38 +01:00
Massimiliano Culpo
b23a829c4c Fix a bug when a required provider is requested for multiple virtuals (#42088) 2024-02-29 11:35:38 +01:00
Massimiliano Culpo
9af5eca9ec Fix using fully-qualified namespaces from root specs (#41957)
Explicitly requested namespaces are annotated during
the setup phase, and used to retrieve the correct package
class.

An attribute for the namespace has been added for each node.

Currently, a single namespace per package is allowed
during concretization.
2024-02-29 11:35:38 +01:00
Jordan Galby
2489b137d9 Fix setup-env when going back and forth between instances (#40924)
* setup-env: Fix back and forth between two instances

* setup-env.csh: Fix SPACK_ROOT when switch to a different instance

i.e. Always look for the current SPACK_ROOT

* setup-env: Update comments
2024-02-29 11:35:38 +01:00
Owen Solberg
64d046100a Containerize: accommodate nested or pre-existing spack-env paths (#41558)
The current `mkdir {{ paths.environment }}` will generate an error if:
* `{{ paths.environment }}` already exists, or
* `{{ paths.environment }}` is nested in non-existing dirs.

Adding `-p` to the command will make this robust to both possibilities.

Set noclobber bash option when writing manifest.
2024-02-29 11:35:38 +01:00
Massimiliano Culpo
000fe1b5a1 Set version to 0.21.2.dev0 2024-02-29 11:35:38 +01:00
Massimiliano Culpo
e30fedab10 Update CHANGELOG and version 2024-01-12 10:16:58 +01:00
eugeneswalker
a7c6df1b5a e4s ci: disable gpu test stack (#41296) 2024-01-12 10:16:58 +01:00
Harmen Stoppels
19e86088cd binary_distribution.py: support build cache layout 2 (#41773)
Add forward compatibility for tarballs created by Spack 0.22, which
use build cache layout version 2.

Spack 0.21 continues to produce build cache layout version 1 tarballs.

Build cache layout version 2 also lists parent directories of the
package prefix in the tarball, which is required for certain container
runtimes.
2024-01-11 09:40:22 +01:00
Harmen Stoppels
0295b466d7 Dont expect __qualname__ to exist (#41989) 2024-01-11 09:40:22 +01:00
Harmen Stoppels
68e9547615 installer.py: do not tty.die when cache only fails (#41990) 2024-01-11 09:40:22 +01:00
Harmen Stoppels
0ab9c8b904 installer.py: don't dereference stage before installing from binaries (#41986)
This fixes an issue where pkg.stage throws because a patch cannot be found,
but the patch is redundant because the spec is reused from a build cache and
will be installed from existing binaries.
2024-01-11 09:40:22 +01:00
Miguel Dias Costa
dd768bb6c3 update BerkeleyGW source urls (#38218)
* update url for BerkeleyGW version 3.0.1
* update source urls and add version 3.1.0 to berkeleygw package
2024-01-11 09:40:22 +01:00
Harmen Stoppels
b15f9d011c Spec.format: error on old style format strings (#41934) 2024-01-11 09:40:22 +01:00
Massimiliano Culpo
4f7cce68b8 ASP-based solver: don't error for type mismatch on preferences (#41138)
This commit discards type mismatches or failures to validate a package preference during concretization. The values discarded are logged as debug level messages. It also adds a config audit to help users spot misconfigurations in packages.yaml preferences.
2024-01-11 09:40:22 +01:00
Massimiliano Culpo
f39a1e5fc8 Fix an issue with deconcretization/reconcretization of environments (#41294) 2024-01-11 09:40:22 +01:00
Massimiliano Culpo
df2a3bd531 ASP-based solver: use a unique ID counter (#41290)
* solver: use a unique counter for condition, triggers and effects

* Do not reset counters when re-running setup

  What we need is just a unique ID, it doesn't need
  to start from zero every time.
2024-01-11 09:40:22 +01:00
Todd Gamblin
e29049d9c0 bugfix: sort variants in spack info --variants-by-name (#41389)
This was missed while backporting the new `spack info` command from #40326.

Variants should be sorted by name when invoking `spack info --variants-by-name`.
2024-01-11 09:40:22 +01:00
Stephen Sachs
de2249c334 clingo-bootstrap: use new Spack API for environment modifications (#41574) 2024-01-11 09:40:22 +01:00
Harmen Stoppels
03d7643480 tests: fix more cases of env variables (#41226) 2024-01-11 09:40:22 +01:00
Massimiliano Culpo
9f2b8eef7a Refactor a test to not use the "working_env" fixture (#41308)
Co-authored-by: Harmen Stoppels <me@harmenstoppels.nl>
2024-01-11 09:40:22 +01:00
Harmen Stoppels
f57ac8d2da tests: fix issue with os.environ binding (#41342) 2024-01-11 09:40:22 +01:00
Harmen Stoppels
539fa5c39a test_variant_propagation_with_unify_false: missing fixture (#41345) 2024-01-11 09:40:22 +01:00
Harmen Stoppels
50710c2b6e tests: fix side effects of default_config fixture (#41361)
* tests: default_config drop scope

* use default_config elsewhere

* use parse_install_tree for missing defaults in default config
2024-01-11 09:40:22 +01:00
Harmen Stoppels
f1b2515ce1 tests: add missing mutable db (#41359) 2024-01-11 09:40:22 +01:00
Harmen Stoppels
37f65e769c unit tests: replace /bin/bash with /bin/sh (#41495) 2024-01-11 09:40:22 +01:00
Harmen Stoppels
16b600c193 tests: use temporary_store (#41369) 2024-01-11 09:40:22 +01:00
Harmen Stoppels
bb62f71aa0 asp.py: remove "CLI" reference (#41718)
Can also be an environment root, or programatically
`Spec("x").concretized()`.
2024-01-11 09:40:22 +01:00
Juan Miguel Carceller
fff8e16cdd Add a webgui patch (#41404)
Co-authored-by: jmcarcell <jmcarcell@users.noreply.github.com>
2024-01-11 09:40:22 +01:00
Dave Keeshan
33c287eed8 Fix filter_compiler_wrapper where compiler is None (#41502)
Fix filer_compiler_wrapper for cases where the compiler returned in None, this happens on some installed gcc systems that do not have fortran built into them as standard, e.g. gcc@11.4.0 on ubuntu 22.04
2024-01-11 09:40:22 +01:00
Robert Cohn
2d5ccd3068 handle use of an unconfigured compiler (#41213) 2024-01-10 20:28:14 +01:00
Michael Kuhn
125085c580 Fix multi-word aliases (#41126)
PR #40929 reverted the argument parsing to make `spack --verbose
install` work again. It looks like `--verbose` is the only instance
where this kind of argument inheritance is used since all other commands
override arguments with the same name instead. For instance, `spack
--bootstrap clean` does not invoke `spack clean --bootstrap`.

Therefore, fix multi-line aliases again by parsing the resolved
arguments and instead explicitly pass down `args.verbose` to commands.
2024-01-10 20:28:14 +01:00
Massimiliano Culpo
e70e401be1 spack graph: fix coloring with environments (#41240)
If we use all specs, we won't color correctly build-only dependencies
2024-01-10 20:28:14 +01:00
John W. Parent
e8bbd7763c MSVC preview version breaks clingo build (#41185)
Co-authored-by: Harmen Stoppels <harmenstoppels@gmail.com>
2024-01-10 20:28:14 +01:00
Harmen Stoppels
712db8c85c setup_platform_environment before package env mods (#41205)
This roughly restores the order of operation from Spack 0.20,
where where `AutotoolsPackage.setup_build_environment` would
override the env variable set in `setup_platform_environment` on
macOS.
2024-01-10 20:28:14 +01:00
Massimiliano Culpo
47c560d526 ASP-based solver: don't emit spurious debug output (#41218)
When improving the error message, we started #showing in the
answer set a lot more symbols - but we forgot to suppress the
debug messages warning about UNKNOWN SYMBOLs
2024-01-10 20:28:14 +01:00
Harmen Stoppels
5b386cf9b1 test_which: do not mutate os.environ 2024-01-10 20:28:14 +01:00
Harmen Stoppels
2cbe84b1ee docs: document how spack picks a version / variant (#41070) 2024-01-10 20:28:14 +01:00
Massimiliano Culpo
e1f98fd206 Improve the error message for deprecated preferences (#41075)
Improves the warning for deprecated preferences, and adds a configuration
audit to get files:lines details of the issues.

Co-authored-by: Tamara Dahlgren <35777542+tldahlgren@users.noreply.github.com>
2024-01-10 20:28:14 +01:00
Massimiliano Culpo
d5ef4f8c83 Add audit check to spot when= arguments using wrong named specs (#41107)
* Add audit check to spot when= arguments using named specs

* Fix package issues caught by the new audit
2024-01-10 20:28:14 +01:00
Harmen Stoppels
b49022822d docs: packages config on separate page, demote bootstrapping (#41085) 2024-01-10 20:28:14 +01:00
Massimiliano Culpo
198bd87914 Fix infinite recursion when computing concretization errors (#41061) 2024-01-10 20:28:14 +01:00
Harmen Stoppels
080a781b81 Set version to 0.21.1.dev0 2024-01-10 20:28:14 +01:00
Todd Gamblin
65d3221a9c Update version and CHANGELOG.md for v0.21.0
Co-authored-by: Harmen Stoppels <me@harmenstoppels.nl>
2023-11-11 03:32:22 -08:00
Todd Gamblin
f6b17f6329 update release branch for tutorial command 2023-11-11 03:32:22 -08:00
Greg Becker
09e9bb5c3d spack deconcretize command (#38803)
We have two ways to concretize now:
* `spack concretize` concretizes only the root specs that are not concrete in the environment.
* `spack concretize -f` eliminates all cached concretization data and reconcretizes the *entire* environment.

This PR adds `spack deconcretize`, which eliminates cached concretization data for a spec.  This allows
users greater control over what is preserved from their `spack.lock` file and what is reused when not
using `spack concretize -f`.  If you want to update a spec installed in your environment, you can call
`spack deconcretize` on it, and that spec and any relevant dependents will be removed from the lock file.

`spack concretize` has two options:
* `--root`: limits deconcretized specs to *specific* roots in the environment. You can use this to
  deconcretize exactly one root in a `unify: false` environment.  i.e., if `foo` root is a dependent
  of `bar`, both roots, `spack deconcretize bar` will *not* deconcretize `foo`.
* `--all`: deconcretize *all* specs that match the input spec. By default `spack deconcretize`
  will complain about multiple matches, like `spack uninstall`.
2023-11-11 03:32:22 -08:00
Massimiliano Culpo
f6dc557764 builtin.repo: fix ^mkl pattern in minor packages (#41003)
Co-authored-by: Harmen Stoppels <harmenstoppels@gmail.com>
2023-11-11 03:32:22 -08:00
Massimiliano Culpo
74172fb9d2 gromacs et al: fix ^mkl pattern (#41002)
The ^mkl pattern was used to refer to three packages
even though none of software using it was depending
on "mkl".

This pattern, which follows Hyrum's law, is now being
removed in favor of a more explicit one.

In this PR gromacs, abinit, lammps, and quantum-espresso
are modified.

Intel packages are also modified to provide "lapack"
and "blas" together.
2023-11-11 03:32:22 -08:00
Harmen Stoppels
c266e69cde env: compute env mods only for installed roots (#40997)
And improve the error message (load vs unload).

Of course you could have some uninstalled dependency too, but as long as
it doesn't implement `setup_run_environment` etc, I don't think it hurts
to attempt to load the root anyways, given that failure to do so is a
warning, not a fatal error.
2023-11-11 03:32:22 -08:00
Todd Gamblin
fe57ec2ab7 info: rework spack info command to display variants better (#40998)
This changes variant display to use a much more legible format, and to use screen space
much better (particularly on narrow terminals). It also adds color the variant display
to match other parts of `spack info`.

Descriptions and variant value lists that were frequently squished into a tiny column
before now have closer to the full terminal width.

This change also preserves any whitespace formatting present in `package.py`, so package
maintainers can make easer-to-read descriptions of variant values if they want. For
example, `gasnet` has had a nice description of the `conduits` variant for a while, but
it was wrapped and made illegible by `spack info`. That is now fixed and the original
newlines are kept.

Conditional variants are grouped by their when clauses by default, but if you do not
like the grouping, you can display all the variants in order with `--variants-by-name`.
I'm not sure when people will prefer this, but it makes it easier to tell that a
particular variant is/isn't there. I do think grouping by `when` is the better default.
2023-11-11 03:32:22 -08:00
Adam J. Stewart
3c3476a176 py-black: add v23.10: (#40959) 2023-11-11 03:32:22 -08:00
Scott Wittenburg
67f20c3e5c buildcache: skip unrecognized metadata files (#40941)
This commit improves forward compatibility of Spack with newer build cache metadata formats.

Before this commit, invalid or unrecognized metadata would be fatal errors, now they just cause
a mirror to be skipped.

Co-authored-by: Harmen Stoppels <me@harmenstoppels.nl>
2023-11-11 03:32:22 -08:00
Satish Balay
1baf712b87 intel-oneapi-mkl: do not set __INTEL_POST_CFLAGS env variable (#40947)
This triggers warnings from icx compiler - that breaks petsc configure

$ I_MPI_CC=icx /opt/intel/oneapi/mpi/2021.7.0/bin/mpiicc -E a.c > /dev/null
$ __INTEL_POST_CFLAGS=-Wl,-rpath,/opt/intel/oneapi/mkl/2022.2.0/lib/intel64 I_MPI_CC=icx /opt/intel/oneapi/mpi/2021.7.0/bin/mpiicc -E a.c > /dev/null
icx: warning: -Wl,-rpath,/opt/intel/oneapi/mkl/2022.2.0/lib/intel64: 'linker' input unused [-Wunused-command-line-argument]
2023-11-09 11:44:57 +01:00
Massimiliano Culpo
c73ec0b36d modules: remove deprecated code and test data (#40966)
This removes a few deprecated attributes from the
schema of the "modules" section. Test data for
deprecated options is removed as well.
2023-11-09 11:44:57 +01:00
Harmen Stoppels
9d58d5e645 modules: restore exclude_implicits (#40958) 2023-11-09 11:44:57 +01:00
Massimiliano Culpo
fc5fd7fc60 tcl: filter compiler wrappers to avoid pointing to Spack (#40946) 2023-11-09 11:44:57 +01:00
Tom Vander Aa
efa59510a8 libevent: always autogen.sh (#40945)
The libevent release tarballs ship with a `configure` script generated by an old `libtool`. The `libtool` generated by `configure` is not compatible with `MACOSX_DEPLOYMENT_VERSION` > 10. Regeneration of the `configure` scripts fixes build on macOS. 

Original configure contains:
```
    case $host_os in
    rhapsody* | darwin1.[012])
      _lt_dar_allow_undefined='$wl-undefined ${wl}suppress' ;;
    darwin1.*)
      _lt_dar_allow_undefined='$wl-flat_namespace $wl-undefined ${wl}suppress' ;;
    darwin*) # darwin 5.x on
      # if running on 10.5 or later, the deployment target defaults
      # to the OS version, if on x86, and 10.4, the deployment
      # target defaults to 10.4. Don't you love it?
      case ${MACOSX_DEPLOYMENT_TARGET-10.0},$host in
        10.0,*86*-darwin8*|10.0,*-darwin[91]*)
          _lt_dar_allow_undefined='$wl-undefined ${wl}dynamic_lookup' ;;
        10.[012][,.]*)
          _lt_dar_allow_undefined='$wl-flat_namespace $wl-undefined ${wl}suppress' ;;
        10.*)
          _lt_dar_allow_undefined='$wl-undefined ${wl}dynamic_lookup' ;;
      esac
```

After re-running `autogen.sh`:
```
    case $host_os in
    rhapsody* | darwin1.[012])
      _lt_dar_allow_undefined='$wl-undefined ${wl}suppress' ;;
    darwin1.*)
      _lt_dar_allow_undefined='$wl-flat_namespace $wl-undefined ${wl}suppress' ;;
    darwin*)
      case $MACOSX_DEPLOYMENT_TARGET,$host in
        10.[012],*|,*powerpc*-darwin[5-8]*)
          _lt_dar_allow_undefined='$wl-flat_namespace $wl-undefined ${wl}suppress' ;;
        *)
          _lt_dar_allow_undefined='$wl-undefined ${wl}dynamic_lookup' ;;
      esac
```
2023-11-09 11:44:57 +01:00
Harmen Stoppels
6094ee5eae Revert "defaults/modules.yaml: hide implicits (#40906)" (#40955)
This reverts commit a2f00886e9.
2023-11-09 11:44:57 +01:00
Greg Becker
f7cacdbf40 tutorial stack: update for changes to the basics section for SC23 (#40942) 2023-11-08 08:56:33 +01:00
Harmen Stoppels
5152738084 tutorial: use lmod@8.7.18 because @8.7.19: has bugs (#40939) 2023-11-08 08:56:33 +01:00
Richarda Butler
9ba8d60789 Propagate variant across nodes that don't have that variant (#38512)
Before this PR, variant were not propagated to leaf nodes that could accept 
the propagated value, if some intermediate node couldn't accept it.

This PR fixes that issue by marking nodes as "candidate" for propagation
and by setting the variant only if it can be accepted by the node.

Co-authored-by: Massimiliano Culpo <massimiliano.culpo@gmail.com>
2023-11-08 08:56:33 +01:00
Harmen Stoppels
3c8cd8d30c Ensure global command line arguments end up in args like before (#40929) 2023-11-08 08:56:33 +01:00
Harmen Stoppels
53a31bbbbf tutorial pipeline: force gcc@12.3.0 (#40937) 2023-11-08 08:56:33 +01:00
Harmen Stoppels
bac314a4f1 spack tutorial: use backports/v0.21.0 branch 2023-11-08 08:56:33 +01:00
Harmen Stoppels
10ba172611 catch exceptions in which_string (#40935) 2023-11-08 08:56:33 +01:00
210 changed files with 6068 additions and 2990 deletions

View File

@ -176,7 +176,7 @@ jobs:
runs-on: ${{ matrix.macos-version }}
strategy:
matrix:
macos-version: ['macos-11', 'macos-12']
macos-version: ['macos-12']
steps:
- name: Install dependencies
run: |

View File

@ -1,3 +1,345 @@
# v0.21.3 (2024-10-02)
## Bugfixes
- Forward compatibility with Spack 0.23 packages with language dependencies (#45205, #45191)
- Forward compatibility with `urllib` from Python 3.12.6+ (#46453, #46483)
- Bump `archspec` to 0.2.5-dev for better aarch64 and Windows support (#42854, #44005,
#45721, #46445)
- Support macOS Sequoia (#45018, #45127, #43862)
- CI and test maintenance (#42909, #42728, #46711, #41943, #43363)
# v0.21.2 (2024-03-01)
## Bugfixes
- Containerize: accommodate nested or pre-existing spack-env paths (#41558)
- Fix setup-env script, when going back and forth between instances (#40924)
- Fix using fully-qualified namespaces from root specs (#41957)
- Fix a bug when a required provider is requested for multiple virtuals (#42088)
- OCI buildcaches:
- only push in parallel when forking (#42143)
- use pickleable errors (#42160)
- Fix using sticky variants in externals (#42253)
- Fix a rare issue with conditional requirements and multi-valued variants (#42566)
## Package updates
- rust: add v1.75, rework a few variants (#41161,#41903)
- py-transformers: add v4.35.2 (#41266)
- mgard: fix OpenMP on AppleClang (#42933)
# v0.21.1 (2024-01-11)
## New features
- Add support for reading buildcaches created by Spack v0.22 (#41773)
## Bugfixes
- spack graph: fix coloring with environments (#41240)
- spack info: sort variants in --variants-by-name (#41389)
- Spec.format: error on old style format strings (#41934)
- ASP-based solver:
- fix infinite recursion when computing concretization errors (#41061)
- don't error for type mismatch on preferences (#41138)
- don't emit spurious debug output (#41218)
- Improve the error message for deprecated preferences (#41075)
- Fix MSVC preview version breaking clingo build on Windows (#41185)
- Fix multi-word aliases (#41126)
- Add a warning for unconfigured compiler (#41213)
- environment: fix an issue with deconcretization/reconcretization of specs (#41294)
- buildcache: don't error if a patch is missing, when installing from binaries (#41986)
- Multiple improvements to unit-tests (#41215,#41369,#41495,#41359,#41361,#41345,#41342,#41308,#41226)
## Package updates
- root: add a webgui patch to address security issue (#41404)
- BerkeleyGW: update source urls (#38218)
# v0.21.0 (2023-11-11)
`v0.21.0` is a major feature release.
## Features in this release
1. **Better error messages with condition chaining**
In v0.18, we added better error messages that could tell you what problem happened,
but they couldn't tell you *why* it happened. `0.21` adds *condition chaining* to the
solver, and Spack can now trace back through the conditions that led to an error and
build a tree of causes potential causes and where they came from. For example:
```console
$ spack solve hdf5 ^cmake@3.0.1
==> Error: concretization failed for the following reasons:
1. Cannot satisfy 'cmake@3.0.1'
2. Cannot satisfy 'cmake@3.0.1'
required because hdf5 ^cmake@3.0.1 requested from CLI
3. Cannot satisfy 'cmake@3.18:' and 'cmake@3.0.1
required because hdf5 ^cmake@3.0.1 requested from CLI
required because hdf5 depends on cmake@3.18: when @1.13:
required because hdf5 ^cmake@3.0.1 requested from CLI
4. Cannot satisfy 'cmake@3.12:' and 'cmake@3.0.1
required because hdf5 depends on cmake@3.12:
required because hdf5 ^cmake@3.0.1 requested from CLI
required because hdf5 ^cmake@3.0.1 requested from CLI
```
More details in #40173.
2. **OCI build caches**
You can now use an arbitrary [OCI](https://opencontainers.org) registry as a build
cache:
```console
$ spack mirror add my_registry oci://user/image # Dockerhub
$ spack mirror add my_registry oci://ghcr.io/haampie/spack-test # GHCR
$ spack mirror set --push --oci-username ... --oci-password ... my_registry # set login creds
$ spack buildcache push my_registry [specs...]
```
And you can optionally add a base image to get *runnable* images:
```console
$ spack buildcache push --base-image ubuntu:23.04 my_registry python
Pushed ... as [image]:python-3.11.2-65txfcpqbmpawclvtasuog4yzmxwaoia.spack
$ docker run --rm -it [image]:python-3.11.2-65txfcpqbmpawclvtasuog4yzmxwaoia.spack
```
This creates a container image from the Spack installations on the host system,
without the need to run `spack install` from a `Dockerfile` or `sif` file. It also
addresses the inconvenience of losing binaries of dependencies when `RUN spack
install` fails inside `docker build`.
Further, the container image layers and build cache tarballs are the same files. This
means that `spack install` and `docker pull` use the exact same underlying binaries.
If you previously used `spack install` inside of `docker build`, this feature helps
you save storage by a factor two.
More details in #38358.
3. **Multiple versions of build dependencies**
Increasingly, complex package builds require multiple versions of some build
dependencies. For example, Python packages frequently require very specific versions
of `setuptools`, `cython`, and sometimes different physics packages require different
versions of Python to build. The concretizer enforced that every solve was *unified*,
i.e., that there only be one version of every package. The concretizer now supports
"duplicate" nodes for *build dependencies*, but enforces unification through
transitive link and run dependencies. This will allow it to better resolve complex
dependency graphs in ecosystems like Python, and it also gets us very close to
modeling compilers as proper dependencies.
This change required a major overhaul of the concretizer, as well as a number of
performance optimizations. See #38447, #39621.
4. **Cherry-picking virtual dependencies**
You can now select only a subset of virtual dependencies from a spec that may provide
more. For example, if you want `mpich` to be your `mpi` provider, you can be explicit
by writing:
```
hdf5 ^[virtuals=mpi] mpich
```
Or, if you want to use, e.g., `intel-parallel-studio` for `blas` along with an external
`lapack` like `openblas`, you could write:
```
strumpack ^[virtuals=mpi] intel-parallel-studio+mkl ^[virtuals=lapack] openblas
```
The `virtuals=mpi` is an edge attribute, and dependency edges in Spack graphs now
track which virtuals they satisfied. More details in #17229 and #35322.
Note for packaging: in Spack 0.21 `spec.satisfies("^virtual")` is true if and only if
the package specifies `depends_on("virtual")`. This is different from Spack 0.20,
where depending on a provider implied depending on the virtual provided. See #41002
for an example where `^mkl` was being used to test for several `mkl` providers in a
package that did not depend on `mkl`.
5. **License directive**
Spack packages can now have license metadata, with the new `license()` directive:
```python
license("Apache-2.0")
```
Licenses use [SPDX identifiers](https://spdx.org/licenses), and you can use SPDX
expressions to combine them:
```python
license("Apache-2.0 OR MIT")
```
Like other directives in Spack, it's conditional, so you can handle complex cases like
Spack itself:
```python
license("LGPL-2.1", when="@:0.11")
license("Apache-2.0 OR MIT", when="@0.12:")
```
More details in #39346, #40598.
6. **`spack deconcretize` command**
We are getting close to having a `spack update` command for environments, but we're
not quite there yet. This is the next best thing. `spack deconcretize` gives you
control over what you want to update in an already concrete environment. If you have
an environment built with, say, `meson`, and you want to update your `meson` version,
you can run:
```console
spack deconcretize meson
```
and have everything that depends on `meson` rebuilt the next time you run `spack
concretize`. In a future Spack version, we'll handle all of this in a single command,
but for now you can use this to drop bits of your lockfile and resolve your
dependencies again. More in #38803.
7. **UI Improvements**
The venerable `spack info` command was looking shabby compared to the rest of Spack's
UI, so we reworked it to have a bit more flair. `spack info` now makes much better
use of terminal space and shows variants, their values, and their descriptions much
more clearly. Conditional variants are grouped separately so you can more easily
understand how packages are structured. More in #40998.
`spack checksum` now allows you to filter versions from your editor, or by version
range. It also notifies you about potential download URL changes. See #40403.
8. **Environments can include definitions**
Spack did not previously support using `include:` with The
[definitions](https://spack.readthedocs.io/en/latest/environments.html#spec-list-references)
section of an environment, but now it does. You can use this to curate lists of specs
and more easily reuse them across environments. See #33960.
9. **Aliases**
You can now add aliases to Spack commands in `config.yaml`, e.g. this might enshrine
your favorite args to `spack find` as `spack f`:
```yaml
config:
aliases:
f: find -lv
```
See #17229.
10. **Improved autoloading of modules**
Spack 0.20 was the first release to enable autoloading of direct dependencies in
module files.
The downside of this was that `module avail` and `module load` tab completion would
show users too many modules to choose from, and many users disabled generating
modules for dependencies through `exclude_implicits: true`. Further, it was
necessary to keep hashes in module names to avoid file name clashes.
In this release, you can start using `hide_implicits: true` instead, which exposes
only explicitly installed packages to the user, while still autoloading
dependencies. On top of that, you can safely use `hash_length: 0`, as this config
now only applies to the modules exposed to the user -- you don't have to worry about
file name clashes for hidden dependencies.
Note: for `tcl` this feature requires Modules 4.7 or higher
11. **Updated container labeling**
Nightly Docker images from the `develop` branch will now be tagged as `:develop` and
`:nightly`. The `:latest` tag is no longer associated with `:develop`, but with the
latest stable release. Releases will be tagged with `:{major}`, `:{major}.{minor}`
and `:{major}.{minor}.{patch}`. `ubuntu:18.04` has also been removed from the list of
generated Docker images, as it is no longer supported. See #40593.
## Other new commands and directives
* `spack env activate` without arguments now loads a `default` environment that you do
not have to create (#40756).
* `spack find -H` / `--hashes`: a new shortcut for piping `spack find` output to
other commands (#38663)
* Add `spack checksum --verify`, fix `--add` (#38458)
* New `default_args` context manager factors out common args for directives (#39964)
* `spack compiler find --[no]-mixed-toolchain` lets you easily mix `clang` and
`gfortran` on Linux (#40902)
## Performance improvements
* `spack external find` execution is now much faster (#39843)
* `spack location -i` now much faster on success (#40898)
* Drop redundant rpaths post install (#38976)
* ASP-based solver: avoid cycles in clingo using hidden directive (#40720)
* Fix multiple quadratic complexity issues in environments (#38771)
## Other new features of note
* archspec: update to v0.2.2, support for Sapphire Rapids, Power10, Neoverse V2 (#40917)
* Propagate variants across nodes that don't have that variant (#38512)
* Implement fish completion (#29549)
* Can now distinguish between source/binary mirror; don't ping mirror.spack.io as much (#34523)
* Improve status reporting on install (add [n/total] display) (#37903)
## Windows
This release has the best Windows support of any Spack release yet, with numerous
improvements and much larger swaths of tests passing:
* MSVC and SDK improvements (#37711, #37930, #38500, #39823, #39180)
* Windows external finding: update default paths; treat .bat as executable on Windows (#39850)
* Windows decompression: fix removal of intermediate file (#38958)
* Windows: executable/path handling (#37762)
* Windows build systems: use ninja and enable tests (#33589)
* Windows testing (#36970, #36972, #36973, #36840, #36977, #36792, #36834, #34696, #36971)
* Windows PowerShell support (#39118, #37951)
* Windows symlinking and libraries (#39933, #38599, #34701, #38578, #34701)
## Notable refactors
* User-specified flags take precedence over others in Spack compiler wrappers (#37376)
* Improve setup of build, run, and test environments (#35737, #40916)
* `make` is no longer a required system dependency of Spack (#40380)
* Support Python 3.12 (#40404, #40155, #40153)
* docs: Replace package list with packages.spack.io (#40251)
* Drop Python 2 constructs in Spack (#38720, #38718, #38703)
## Binary cache and stack updates
* e4s arm stack: duplicate and target neoverse v1 (#40369)
* Add macOS ML CI stacks (#36586)
* E4S Cray CI Stack (#37837)
* e4s cray: expand spec list (#38947)
* e4s cray sles ci: expand spec list (#39081)
## Removals, deprecations, and syntax changes
* ASP: targets, compilers and providers soft-preferences are only global (#31261)
* Parser: fix ambiguity with whitespace in version ranges (#40344)
* Module file generation is disabled by default; you'll need to enable it to use it (#37258)
* Remove deprecated "extra_instructions" option for containers (#40365)
* Stand-alone test feature deprecation postponed to v0.22 (#40600)
* buildcache push: make `--allow-root` the default and deprecate the option (#38878)
## Notable Bugfixes
* Bugfix: propagation of multivalued variants (#39833)
* Allow `/` in git versions (#39398)
* Fetch & patch: actually acquire stage lock, and many more issues (#38903)
* Environment/depfile: better escaping of targets with Git versions (#37560)
* Prevent "spack external find" to error out on wrong permissions (#38755)
* lmod: allow core compiler to be specified with a version range (#37789)
## Spack community stats
* 7,469 total packages, 303 new since `v0.20.0`
* 150 new Python packages
* 34 new R packages
* 353 people contributed to this release
* 336 committers to packages
* 65 committers to core
# v0.20.3 (2023-10-31)
## Bugfixes

View File

@ -46,12 +46,10 @@ modules:
tcl:
all:
autoload: direct
hide_implicits: true
# Default configurations if lmod is enabled
lmod:
all:
autoload: direct
hide_implicits: true
hierarchy:
- mpi

View File

@ -37,7 +37,11 @@ to enable reuse for a single installation, and you can use:
spack install --fresh <spec>
to do a fresh install if ``reuse`` is enabled by default.
``reuse: true`` is the default.
``reuse: dependencies`` is the default.
.. seealso::
FAQ: :ref:`Why does Spack pick particular versions and variants? <faq-concretizer-precedence>`
------------------------------------------
Selection of the target microarchitectures
@ -99,547 +103,3 @@ while `py-numpy` still needs an older version:
Up to Spack v0.20 ``duplicates:strategy:none`` was the default (and only) behavior. From Spack v0.21 the
default behavior is ``duplicates:strategy:minimal``.
.. _build-settings:
================================
Package Settings (packages.yaml)
================================
Spack allows you to customize how your software is built through the
``packages.yaml`` file. Using it, you can make Spack prefer particular
implementations of virtual dependencies (e.g., MPI or BLAS/LAPACK),
or you can make it prefer to build with particular compilers. You can
also tell Spack to use *external* software installations already
present on your system.
At a high level, the ``packages.yaml`` file is structured like this:
.. code-block:: yaml
packages:
package1:
# settings for package1
package2:
# settings for package2
# ...
all:
# settings that apply to all packages.
So you can either set build preferences specifically for *one* package,
or you can specify that certain settings should apply to *all* packages.
The types of settings you can customize are described in detail below.
Spack's build defaults are in the default
``etc/spack/defaults/packages.yaml`` file. You can override them in
``~/.spack/packages.yaml`` or ``etc/spack/packages.yaml``. For more
details on how this works, see :ref:`configuration-scopes`.
.. _sec-external-packages:
-----------------
External Packages
-----------------
Spack can be configured to use externally-installed
packages rather than building its own packages. This may be desirable
if machines ship with system packages, such as a customized MPI
that should be used instead of Spack building its own MPI.
External packages are configured through the ``packages.yaml`` file.
Here's an example of an external configuration:
.. code-block:: yaml
packages:
openmpi:
externals:
- spec: "openmpi@1.4.3%gcc@4.4.7 arch=linux-debian7-x86_64"
prefix: /opt/openmpi-1.4.3
- spec: "openmpi@1.4.3%gcc@4.4.7 arch=linux-debian7-x86_64+debug"
prefix: /opt/openmpi-1.4.3-debug
- spec: "openmpi@1.6.5%intel@10.1 arch=linux-debian7-x86_64"
prefix: /opt/openmpi-1.6.5-intel
This example lists three installations of OpenMPI, one built with GCC,
one built with GCC and debug information, and another built with Intel.
If Spack is asked to build a package that uses one of these MPIs as a
dependency, it will use the pre-installed OpenMPI in
the given directory. Note that the specified path is the top-level
install prefix, not the ``bin`` subdirectory.
``packages.yaml`` can also be used to specify modules to load instead
of the installation prefixes. The following example says that module
``CMake/3.7.2`` provides cmake version 3.7.2.
.. code-block:: yaml
cmake:
externals:
- spec: cmake@3.7.2
modules:
- CMake/3.7.2
Each ``packages.yaml`` begins with a ``packages:`` attribute, followed
by a list of package names. To specify externals, add an ``externals:``
attribute under the package name, which lists externals.
Each external should specify a ``spec:`` string that should be as
well-defined as reasonably possible. If a
package lacks a spec component, such as missing a compiler or
package version, then Spack will guess the missing component based
on its most-favored packages, and it may guess incorrectly.
Each package version and compiler listed in an external should
have entries in Spack's packages and compiler configuration, even
though the package and compiler may not ever be built.
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
Prevent packages from being built from sources
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
Adding an external spec in ``packages.yaml`` allows Spack to use an external location,
but it does not prevent Spack from building packages from sources. In the above example,
Spack might choose for many valid reasons to start building and linking with the
latest version of OpenMPI rather than continue using the pre-installed OpenMPI versions.
To prevent this, the ``packages.yaml`` configuration also allows packages
to be flagged as non-buildable. The previous example could be modified to
be:
.. code-block:: yaml
packages:
openmpi:
externals:
- spec: "openmpi@1.4.3%gcc@4.4.7 arch=linux-debian7-x86_64"
prefix: /opt/openmpi-1.4.3
- spec: "openmpi@1.4.3%gcc@4.4.7 arch=linux-debian7-x86_64+debug"
prefix: /opt/openmpi-1.4.3-debug
- spec: "openmpi@1.6.5%intel@10.1 arch=linux-debian7-x86_64"
prefix: /opt/openmpi-1.6.5-intel
buildable: False
The addition of the ``buildable`` flag tells Spack that it should never build
its own version of OpenMPI from sources, and it will instead always rely on a pre-built
OpenMPI.
.. note::
If ``concretizer:reuse`` is on (see :ref:`concretizer-options` for more information on that flag)
pre-built specs include specs already available from a local store, an upstream store, a registered
buildcache or specs marked as externals in ``packages.yaml``. If ``concretizer:reuse`` is off, only
external specs in ``packages.yaml`` are included in the list of pre-built specs.
If an external module is specified as not buildable, then Spack will load the
external module into the build environment which can be used for linking.
The ``buildable`` does not need to be paired with external packages.
It could also be used alone to forbid packages that may be
buggy or otherwise undesirable.
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
Non-buildable virtual packages
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
Virtual packages in Spack can also be specified as not buildable, and
external implementations can be provided. In the example above,
OpenMPI is configured as not buildable, but Spack will often prefer
other MPI implementations over the externally available OpenMPI. Spack
can be configured with every MPI provider not buildable individually,
but more conveniently:
.. code-block:: yaml
packages:
mpi:
buildable: False
openmpi:
externals:
- spec: "openmpi@1.4.3%gcc@4.4.7 arch=linux-debian7-x86_64"
prefix: /opt/openmpi-1.4.3
- spec: "openmpi@1.4.3%gcc@4.4.7 arch=linux-debian7-x86_64+debug"
prefix: /opt/openmpi-1.4.3-debug
- spec: "openmpi@1.6.5%intel@10.1 arch=linux-debian7-x86_64"
prefix: /opt/openmpi-1.6.5-intel
Spack can then use any of the listed external implementations of MPI
to satisfy a dependency, and will choose depending on the compiler and
architecture.
In cases where the concretizer is configured to reuse specs, and other ``mpi`` providers
(available via stores or buildcaches) are not wanted, Spack can be configured to require
specs matching only the available externals:
.. code-block:: yaml
packages:
mpi:
buildable: False
require:
- one_of: [
"openmpi@1.4.3%gcc@4.4.7 arch=linux-debian7-x86_64",
"openmpi@1.4.3%gcc@4.4.7 arch=linux-debian7-x86_64+debug",
"openmpi@1.6.5%intel@10.1 arch=linux-debian7-x86_64"
]
openmpi:
externals:
- spec: "openmpi@1.4.3%gcc@4.4.7 arch=linux-debian7-x86_64"
prefix: /opt/openmpi-1.4.3
- spec: "openmpi@1.4.3%gcc@4.4.7 arch=linux-debian7-x86_64+debug"
prefix: /opt/openmpi-1.4.3-debug
- spec: "openmpi@1.6.5%intel@10.1 arch=linux-debian7-x86_64"
prefix: /opt/openmpi-1.6.5-intel
This configuration prevents any spec using MPI and originating from stores or buildcaches to be reused,
unless it matches the requirements under ``packages:mpi:require``. For more information on requirements see
:ref:`package-requirements`.
.. _cmd-spack-external-find:
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
Automatically Find External Packages
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
You can run the :ref:`spack external find <spack-external-find>` command
to search for system-provided packages and add them to ``packages.yaml``.
After running this command your ``packages.yaml`` may include new entries:
.. code-block:: yaml
packages:
cmake:
externals:
- spec: cmake@3.17.2
prefix: /usr
Generally this is useful for detecting a small set of commonly-used packages;
for now this is generally limited to finding build-only dependencies.
Specific limitations include:
* Packages are not discoverable by default: For a package to be
discoverable with ``spack external find``, it needs to add special
logic. See :ref:`here <make-package-findable>` for more details.
* The logic does not search through module files, it can only detect
packages with executables defined in ``PATH``; you can help Spack locate
externals which use module files by loading any associated modules for
packages that you want Spack to know about before running
``spack external find``.
* Spack does not overwrite existing entries in the package configuration:
If there is an external defined for a spec at any configuration scope,
then Spack will not add a new external entry (``spack config blame packages``
can help locate all external entries).
.. _package-requirements:
--------------------
Package Requirements
--------------------
Spack can be configured to always use certain compilers, package
versions, and variants during concretization through package
requirements.
Package requirements are useful when you find yourself repeatedly
specifying the same constraints on the command line, and wish that
Spack respects these constraints whether you mention them explicitly
or not. Another use case is specifying constraints that should apply
to all root specs in an environment, without having to repeat the
constraint everywhere.
Apart from that, requirements config is more flexible than constraints
on the command line, because it can specify constraints on packages
*when they occur* as a dependency. In contrast, on the command line it
is not possible to specify constraints on dependencies while also keeping
those dependencies optional.
^^^^^^^^^^^^^^^^^^^
Requirements syntax
^^^^^^^^^^^^^^^^^^^
The package requirements configuration is specified in ``packages.yaml``,
keyed by package name and expressed using the Spec syntax. In the simplest
case you can specify attributes that you always want the package to have
by providing a single spec string to ``require``:
.. code-block:: yaml
packages:
libfabric:
require: "@1.13.2"
In the above example, ``libfabric`` will always build with version 1.13.2. If you
need to compose multiple configuration scopes ``require`` accepts a list of
strings:
.. code-block:: yaml
packages:
libfabric:
require:
- "@1.13.2"
- "%gcc"
In this case ``libfabric`` will always build with version 1.13.2 **and** using GCC
as a compiler.
For more complex use cases, require accepts also a list of objects. These objects
must have either a ``any_of`` or a ``one_of`` field, containing a list of spec strings,
and they can optionally have a ``when`` and a ``message`` attribute:
.. code-block:: yaml
packages:
openmpi:
require:
- any_of: ["@4.1.5", "%gcc"]
message: "in this example only 4.1.5 can build with other compilers"
``any_of`` is a list of specs. One of those specs must be satisfied
and it is also allowed for the concretized spec to match more than one.
In the above example, that means you could build ``openmpi@4.1.5%gcc``,
``openmpi@4.1.5%clang`` or ``openmpi@3.9%gcc``, but
not ``openmpi@3.9%clang``.
If a custom message is provided, and the requirement is not satisfiable,
Spack will print the custom error message:
.. code-block:: console
$ spack spec openmpi@3.9%clang
==> Error: in this example only 4.1.5 can build with other compilers
We could express a similar requirement using the ``when`` attribute:
.. code-block:: yaml
packages:
openmpi:
require:
- any_of: ["%gcc"]
when: "@:4.1.4"
message: "in this example only 4.1.5 can build with other compilers"
In the example above, if the version turns out to be 4.1.4 or less, we require the compiler to be GCC.
For readability, Spack also allows a ``spec`` key accepting a string when there is only a single
constraint:
.. code-block:: yaml
packages:
openmpi:
require:
- spec: "%gcc"
when: "@:4.1.4"
message: "in this example only 4.1.5 can build with other compilers"
This code snippet and the one before it are semantically equivalent.
Finally, instead of ``any_of`` you can use ``one_of`` which also takes a list of specs. The final
concretized spec must match one and only one of them:
.. code-block:: yaml
packages:
mpich:
require:
- one_of: ["+cuda", "+rocm"]
In the example above, that means you could build ``mpich+cuda`` or ``mpich+rocm`` but not ``mpich+cuda+rocm``.
.. note::
For ``any_of`` and ``one_of``, the order of specs indicates a
preference: items that appear earlier in the list are preferred
(note that these preferences can be ignored in favor of others).
.. note::
When using a conditional requirement, Spack is allowed to actively avoid the triggering
condition (the ``when=...`` spec) if that leads to a concrete spec with better scores in
the optimization criteria. To check the current optimization criteria and their
priorities you can run ``spack solve zlib``.
^^^^^^^^^^^^^^^^^^^^^^^^^^^^
Setting default requirements
^^^^^^^^^^^^^^^^^^^^^^^^^^^^
You can also set default requirements for all packages under ``all``
like this:
.. code-block:: yaml
packages:
all:
require: '%clang'
which means every spec will be required to use ``clang`` as a compiler.
Note that in this case ``all`` represents a *default set of requirements* -
if there are specific package requirements, then the default requirements
under ``all`` are disregarded. For example, with a configuration like this:
.. code-block:: yaml
packages:
all:
require: '%clang'
cmake:
require: '%gcc'
Spack requires ``cmake`` to use ``gcc`` and all other nodes (including ``cmake``
dependencies) to use ``clang``.
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
Setting requirements on virtual specs
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
A requirement on a virtual spec applies whenever that virtual is present in the DAG.
This can be useful for fixing which virtual provider you want to use:
.. code-block:: yaml
packages:
mpi:
require: 'mvapich2 %gcc'
With the configuration above the only allowed ``mpi`` provider is ``mvapich2 %gcc``.
Requirements on the virtual spec and on the specific provider are both applied, if
present. For instance with a configuration like:
.. code-block:: yaml
packages:
mpi:
require: 'mvapich2 %gcc'
mvapich2:
require: '~cuda'
you will use ``mvapich2~cuda %gcc`` as an ``mpi`` provider.
.. _package-preferences:
-------------------
Package Preferences
-------------------
In some cases package requirements can be too strong, and package
preferences are the better option. Package preferences do not impose
constraints on packages for particular versions or variants values,
they rather only set defaults. The concretizer is free to change
them if it must, due to other constraints, and also prefers reusing
installed packages over building new ones that are a better match for
preferences.
Most package preferences (``compilers``, ``target`` and ``providers``)
can only be set globally under the ``all`` section of ``packages.yaml``:
.. code-block:: yaml
packages:
all:
compiler: [gcc@12.2.0, clang@12:, oneapi@2023:]
target: [x86_64_v3]
providers:
mpi: [mvapich2, mpich, openmpi]
These preferences override Spack's default and effectively reorder priorities
when looking for the best compiler, target or virtual package provider. Each
preference takes an ordered list of spec constraints, with earlier entries in
the list being preferred over later entries.
In the example above all packages prefer to be compiled with ``gcc@12.2.0``,
to target the ``x86_64_v3`` microarchitecture and to use ``mvapich2`` if they
depend on ``mpi``.
The ``variants`` and ``version`` preferences can be set under
package specific sections of the ``packages.yaml`` file:
.. code-block:: yaml
packages:
opencv:
variants: +debug
gperftools:
version: [2.2, 2.4, 2.3]
In this case, the preference for ``opencv`` is to build with debug options, while
``gperftools`` prefers version 2.2 over 2.4.
Any preference can be overwritten on the command line if explicitly requested.
Preferences cannot overcome explicit constraints, as they only set a preferred
ordering among homogeneous attribute values. Going back to the example, if
``gperftools@2.3:`` was requested, then Spack will install version 2.4
since the most preferred version 2.2 is prohibited by the version constraint.
.. _package_permissions:
-------------------
Package Permissions
-------------------
Spack can be configured to assign permissions to the files installed
by a package.
In the ``packages.yaml`` file under ``permissions``, the attributes
``read``, ``write``, and ``group`` control the package
permissions. These attributes can be set per-package, or for all
packages under ``all``. If permissions are set under ``all`` and for a
specific package, the package-specific settings take precedence.
The ``read`` and ``write`` attributes take one of ``user``, ``group``,
and ``world``.
.. code-block:: yaml
packages:
all:
permissions:
write: group
group: spack
my_app:
permissions:
read: group
group: my_team
The permissions settings describe the broadest level of access to
installations of the specified packages. The execute permissions of
the file are set to the same level as read permissions for those files
that are executable. The default setting for ``read`` is ``world``,
and for ``write`` is ``user``. In the example above, installations of
``my_app`` will be installed with user and group permissions but no
world permissions, and owned by the group ``my_team``. All other
packages will be installed with user and group write privileges, and
world read privileges. Those packages will be owned by the group
``spack``.
The ``group`` attribute assigns a Unix-style group to a package. All
files installed by the package will be owned by the assigned group,
and the sticky group bit will be set on the install prefix and all
directories inside the install prefix. This will ensure that even
manually placed files within the install prefix are owned by the
assigned group. If no group is assigned, Spack will allow the OS
default behavior to go as expected.
----------------------------
Assigning Package Attributes
----------------------------
You can assign class-level attributes in the configuration:
.. code-block:: yaml
packages:
mpileaks:
# Override existing attributes
url: http://www.somewhereelse.com/mpileaks-1.0.tar.gz
# ... or add new ones
x: 1
Attributes set this way will be accessible to any method executed
in the package.py file (e.g. the ``install()`` method). Values for these
attributes may be any value parseable by yaml.
These can only be applied to specific packages, not "all" or
virtual packages.

View File

@ -392,7 +392,7 @@ See section
:ref:`Configuration Scopes <configuration-scopes>`
for an explanation about the different files
and section
:ref:`Build customization <build-settings>`
:ref:`Build customization <packages-config>`
for specifics and examples for ``packages.yaml`` files.
.. If your system administrator did not provide modules for pre-installed Intel

View File

@ -17,7 +17,7 @@ case you want to skip directly to specific docs:
* :ref:`config.yaml <config-yaml>`
* :ref:`mirrors.yaml <mirrors>`
* :ref:`modules.yaml <modules>`
* :ref:`packages.yaml <build-settings>`
* :ref:`packages.yaml <packages-config>`
* :ref:`repos.yaml <repositories>`
You can also add any of these as inline configuration in the YAML

View File

@ -0,0 +1,77 @@
.. Copyright 2013-2023 Lawrence Livermore National Security, LLC and other
Spack Project Developers. See the top-level COPYRIGHT file for details.
SPDX-License-Identifier: (Apache-2.0 OR MIT)
==========================
Frequently Asked Questions
==========================
This page contains answers to frequently asked questions about Spack.
If you have questions that are not answered here, feel free to ask on
`Slack <https://slack.spack.io>`_ or `GitHub Discussions
<https://github.com/spack/spack/discussions>`_. If you've learned the
answer to a question that you think should be here, please consider
contributing to this page.
.. _faq-concretizer-precedence:
-----------------------------------------------------
Why does Spack pick particular versions and variants?
-----------------------------------------------------
This question comes up in a variety of forms:
1. Why does Spack seem to ignore my package preferences from ``packages.yaml`` config?
2. Why does Spack toggle a variant instead of using the default from the ``package.py`` file?
The short answer is that Spack always picks an optimal configuration
based on a complex set of criteria\ [#f1]_. These criteria are more nuanced
than always choosing the latest versions or default variants.
.. note::
As a rule of thumb: requirements + constraints > reuse > preferences > defaults.
The following set of criteria (from lowest to highest precedence) explain
common cases where concretization output may seem surprising at first.
1. :ref:`Package preferences <package-preferences>` configured in ``packages.yaml``
override variant defaults from ``package.py`` files, and influence the optimal
ordering of versions. Preferences are specified as follows:
.. code-block:: yaml
packages:
foo:
version: [1.0, 1.1]
variants: ~mpi
2. :ref:`Reuse concretization <concretizer-options>` configured in ``concretizer.yaml``
overrides preferences, since it's typically faster to reuse an existing spec than to
build a preferred one from sources. When build caches are enabled, specs may be reused
from a remote location too. Reuse concretization is configured as follows:
.. code-block:: yaml
concretizer:
reuse: dependencies # other options are 'true' and 'false'
3. :ref:`Package requirements <package-requirements>` configured in ``packages.yaml``,
and constraints from the command line as well as ``package.py`` files override all
of the above. Requirements are specified as follows:
.. code-block:: yaml
packages:
foo:
require:
- "@1.2: +mpi"
Requirements and constraints restrict the set of possible solutions, while reuse
behavior and preferences influence what an optimal solution looks like.
.. rubric:: Footnotes
.. [#f1] The exact list of criteria can be retrieved with the ``spack solve`` command

View File

@ -55,6 +55,7 @@ or refer to the full manual below.
getting_started
basic_usage
replace_conda_homebrew
frequently_asked_questions
.. toctree::
:maxdepth: 2
@ -70,7 +71,7 @@ or refer to the full manual below.
configuration
config_yaml
bootstrapping
packages_yaml
build_settings
environments
containers
@ -78,6 +79,7 @@ or refer to the full manual below.
module_file_support
repositories
binary_caches
bootstrapping
command_index
chain
extensions

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@ -0,0 +1,560 @@
.. Copyright 2013-2023 Lawrence Livermore National Security, LLC and other
Spack Project Developers. See the top-level COPYRIGHT file for details.
SPDX-License-Identifier: (Apache-2.0 OR MIT)
.. _packages-config:
================================
Package Settings (packages.yaml)
================================
Spack allows you to customize how your software is built through the
``packages.yaml`` file. Using it, you can make Spack prefer particular
implementations of virtual dependencies (e.g., MPI or BLAS/LAPACK),
or you can make it prefer to build with particular compilers. You can
also tell Spack to use *external* software installations already
present on your system.
At a high level, the ``packages.yaml`` file is structured like this:
.. code-block:: yaml
packages:
package1:
# settings for package1
package2:
# settings for package2
# ...
all:
# settings that apply to all packages.
So you can either set build preferences specifically for *one* package,
or you can specify that certain settings should apply to *all* packages.
The types of settings you can customize are described in detail below.
Spack's build defaults are in the default
``etc/spack/defaults/packages.yaml`` file. You can override them in
``~/.spack/packages.yaml`` or ``etc/spack/packages.yaml``. For more
details on how this works, see :ref:`configuration-scopes`.
.. _sec-external-packages:
-----------------
External Packages
-----------------
Spack can be configured to use externally-installed
packages rather than building its own packages. This may be desirable
if machines ship with system packages, such as a customized MPI
that should be used instead of Spack building its own MPI.
External packages are configured through the ``packages.yaml`` file.
Here's an example of an external configuration:
.. code-block:: yaml
packages:
openmpi:
externals:
- spec: "openmpi@1.4.3%gcc@4.4.7 arch=linux-debian7-x86_64"
prefix: /opt/openmpi-1.4.3
- spec: "openmpi@1.4.3%gcc@4.4.7 arch=linux-debian7-x86_64+debug"
prefix: /opt/openmpi-1.4.3-debug
- spec: "openmpi@1.6.5%intel@10.1 arch=linux-debian7-x86_64"
prefix: /opt/openmpi-1.6.5-intel
This example lists three installations of OpenMPI, one built with GCC,
one built with GCC and debug information, and another built with Intel.
If Spack is asked to build a package that uses one of these MPIs as a
dependency, it will use the pre-installed OpenMPI in
the given directory. Note that the specified path is the top-level
install prefix, not the ``bin`` subdirectory.
``packages.yaml`` can also be used to specify modules to load instead
of the installation prefixes. The following example says that module
``CMake/3.7.2`` provides cmake version 3.7.2.
.. code-block:: yaml
cmake:
externals:
- spec: cmake@3.7.2
modules:
- CMake/3.7.2
Each ``packages.yaml`` begins with a ``packages:`` attribute, followed
by a list of package names. To specify externals, add an ``externals:``
attribute under the package name, which lists externals.
Each external should specify a ``spec:`` string that should be as
well-defined as reasonably possible. If a
package lacks a spec component, such as missing a compiler or
package version, then Spack will guess the missing component based
on its most-favored packages, and it may guess incorrectly.
Each package version and compiler listed in an external should
have entries in Spack's packages and compiler configuration, even
though the package and compiler may not ever be built.
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
Prevent packages from being built from sources
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
Adding an external spec in ``packages.yaml`` allows Spack to use an external location,
but it does not prevent Spack from building packages from sources. In the above example,
Spack might choose for many valid reasons to start building and linking with the
latest version of OpenMPI rather than continue using the pre-installed OpenMPI versions.
To prevent this, the ``packages.yaml`` configuration also allows packages
to be flagged as non-buildable. The previous example could be modified to
be:
.. code-block:: yaml
packages:
openmpi:
externals:
- spec: "openmpi@1.4.3%gcc@4.4.7 arch=linux-debian7-x86_64"
prefix: /opt/openmpi-1.4.3
- spec: "openmpi@1.4.3%gcc@4.4.7 arch=linux-debian7-x86_64+debug"
prefix: /opt/openmpi-1.4.3-debug
- spec: "openmpi@1.6.5%intel@10.1 arch=linux-debian7-x86_64"
prefix: /opt/openmpi-1.6.5-intel
buildable: False
The addition of the ``buildable`` flag tells Spack that it should never build
its own version of OpenMPI from sources, and it will instead always rely on a pre-built
OpenMPI.
.. note::
If ``concretizer:reuse`` is on (see :ref:`concretizer-options` for more information on that flag)
pre-built specs include specs already available from a local store, an upstream store, a registered
buildcache or specs marked as externals in ``packages.yaml``. If ``concretizer:reuse`` is off, only
external specs in ``packages.yaml`` are included in the list of pre-built specs.
If an external module is specified as not buildable, then Spack will load the
external module into the build environment which can be used for linking.
The ``buildable`` does not need to be paired with external packages.
It could also be used alone to forbid packages that may be
buggy or otherwise undesirable.
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
Non-buildable virtual packages
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
Virtual packages in Spack can also be specified as not buildable, and
external implementations can be provided. In the example above,
OpenMPI is configured as not buildable, but Spack will often prefer
other MPI implementations over the externally available OpenMPI. Spack
can be configured with every MPI provider not buildable individually,
but more conveniently:
.. code-block:: yaml
packages:
mpi:
buildable: False
openmpi:
externals:
- spec: "openmpi@1.4.3%gcc@4.4.7 arch=linux-debian7-x86_64"
prefix: /opt/openmpi-1.4.3
- spec: "openmpi@1.4.3%gcc@4.4.7 arch=linux-debian7-x86_64+debug"
prefix: /opt/openmpi-1.4.3-debug
- spec: "openmpi@1.6.5%intel@10.1 arch=linux-debian7-x86_64"
prefix: /opt/openmpi-1.6.5-intel
Spack can then use any of the listed external implementations of MPI
to satisfy a dependency, and will choose depending on the compiler and
architecture.
In cases where the concretizer is configured to reuse specs, and other ``mpi`` providers
(available via stores or buildcaches) are not wanted, Spack can be configured to require
specs matching only the available externals:
.. code-block:: yaml
packages:
mpi:
buildable: False
require:
- one_of: [
"openmpi@1.4.3%gcc@4.4.7 arch=linux-debian7-x86_64",
"openmpi@1.4.3%gcc@4.4.7 arch=linux-debian7-x86_64+debug",
"openmpi@1.6.5%intel@10.1 arch=linux-debian7-x86_64"
]
openmpi:
externals:
- spec: "openmpi@1.4.3%gcc@4.4.7 arch=linux-debian7-x86_64"
prefix: /opt/openmpi-1.4.3
- spec: "openmpi@1.4.3%gcc@4.4.7 arch=linux-debian7-x86_64+debug"
prefix: /opt/openmpi-1.4.3-debug
- spec: "openmpi@1.6.5%intel@10.1 arch=linux-debian7-x86_64"
prefix: /opt/openmpi-1.6.5-intel
This configuration prevents any spec using MPI and originating from stores or buildcaches to be reused,
unless it matches the requirements under ``packages:mpi:require``. For more information on requirements see
:ref:`package-requirements`.
.. _cmd-spack-external-find:
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
Automatically Find External Packages
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
You can run the :ref:`spack external find <spack-external-find>` command
to search for system-provided packages and add them to ``packages.yaml``.
After running this command your ``packages.yaml`` may include new entries:
.. code-block:: yaml
packages:
cmake:
externals:
- spec: cmake@3.17.2
prefix: /usr
Generally this is useful for detecting a small set of commonly-used packages;
for now this is generally limited to finding build-only dependencies.
Specific limitations include:
* Packages are not discoverable by default: For a package to be
discoverable with ``spack external find``, it needs to add special
logic. See :ref:`here <make-package-findable>` for more details.
* The logic does not search through module files, it can only detect
packages with executables defined in ``PATH``; you can help Spack locate
externals which use module files by loading any associated modules for
packages that you want Spack to know about before running
``spack external find``.
* Spack does not overwrite existing entries in the package configuration:
If there is an external defined for a spec at any configuration scope,
then Spack will not add a new external entry (``spack config blame packages``
can help locate all external entries).
.. _package-requirements:
--------------------
Package Requirements
--------------------
Spack can be configured to always use certain compilers, package
versions, and variants during concretization through package
requirements.
Package requirements are useful when you find yourself repeatedly
specifying the same constraints on the command line, and wish that
Spack respects these constraints whether you mention them explicitly
or not. Another use case is specifying constraints that should apply
to all root specs in an environment, without having to repeat the
constraint everywhere.
Apart from that, requirements config is more flexible than constraints
on the command line, because it can specify constraints on packages
*when they occur* as a dependency. In contrast, on the command line it
is not possible to specify constraints on dependencies while also keeping
those dependencies optional.
.. seealso::
FAQ: :ref:`Why does Spack pick particular versions and variants? <faq-concretizer-precedence>`
^^^^^^^^^^^^^^^^^^^
Requirements syntax
^^^^^^^^^^^^^^^^^^^
The package requirements configuration is specified in ``packages.yaml``,
keyed by package name and expressed using the Spec syntax. In the simplest
case you can specify attributes that you always want the package to have
by providing a single spec string to ``require``:
.. code-block:: yaml
packages:
libfabric:
require: "@1.13.2"
In the above example, ``libfabric`` will always build with version 1.13.2. If you
need to compose multiple configuration scopes ``require`` accepts a list of
strings:
.. code-block:: yaml
packages:
libfabric:
require:
- "@1.13.2"
- "%gcc"
In this case ``libfabric`` will always build with version 1.13.2 **and** using GCC
as a compiler.
For more complex use cases, require accepts also a list of objects. These objects
must have either a ``any_of`` or a ``one_of`` field, containing a list of spec strings,
and they can optionally have a ``when`` and a ``message`` attribute:
.. code-block:: yaml
packages:
openmpi:
require:
- any_of: ["@4.1.5", "%gcc"]
message: "in this example only 4.1.5 can build with other compilers"
``any_of`` is a list of specs. One of those specs must be satisfied
and it is also allowed for the concretized spec to match more than one.
In the above example, that means you could build ``openmpi@4.1.5%gcc``,
``openmpi@4.1.5%clang`` or ``openmpi@3.9%gcc``, but
not ``openmpi@3.9%clang``.
If a custom message is provided, and the requirement is not satisfiable,
Spack will print the custom error message:
.. code-block:: console
$ spack spec openmpi@3.9%clang
==> Error: in this example only 4.1.5 can build with other compilers
We could express a similar requirement using the ``when`` attribute:
.. code-block:: yaml
packages:
openmpi:
require:
- any_of: ["%gcc"]
when: "@:4.1.4"
message: "in this example only 4.1.5 can build with other compilers"
In the example above, if the version turns out to be 4.1.4 or less, we require the compiler to be GCC.
For readability, Spack also allows a ``spec`` key accepting a string when there is only a single
constraint:
.. code-block:: yaml
packages:
openmpi:
require:
- spec: "%gcc"
when: "@:4.1.4"
message: "in this example only 4.1.5 can build with other compilers"
This code snippet and the one before it are semantically equivalent.
Finally, instead of ``any_of`` you can use ``one_of`` which also takes a list of specs. The final
concretized spec must match one and only one of them:
.. code-block:: yaml
packages:
mpich:
require:
- one_of: ["+cuda", "+rocm"]
In the example above, that means you could build ``mpich+cuda`` or ``mpich+rocm`` but not ``mpich+cuda+rocm``.
.. note::
For ``any_of`` and ``one_of``, the order of specs indicates a
preference: items that appear earlier in the list are preferred
(note that these preferences can be ignored in favor of others).
.. note::
When using a conditional requirement, Spack is allowed to actively avoid the triggering
condition (the ``when=...`` spec) if that leads to a concrete spec with better scores in
the optimization criteria. To check the current optimization criteria and their
priorities you can run ``spack solve zlib``.
^^^^^^^^^^^^^^^^^^^^^^^^^^^^
Setting default requirements
^^^^^^^^^^^^^^^^^^^^^^^^^^^^
You can also set default requirements for all packages under ``all``
like this:
.. code-block:: yaml
packages:
all:
require: '%clang'
which means every spec will be required to use ``clang`` as a compiler.
Note that in this case ``all`` represents a *default set of requirements* -
if there are specific package requirements, then the default requirements
under ``all`` are disregarded. For example, with a configuration like this:
.. code-block:: yaml
packages:
all:
require: '%clang'
cmake:
require: '%gcc'
Spack requires ``cmake`` to use ``gcc`` and all other nodes (including ``cmake``
dependencies) to use ``clang``.
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
Setting requirements on virtual specs
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
A requirement on a virtual spec applies whenever that virtual is present in the DAG.
This can be useful for fixing which virtual provider you want to use:
.. code-block:: yaml
packages:
mpi:
require: 'mvapich2 %gcc'
With the configuration above the only allowed ``mpi`` provider is ``mvapich2 %gcc``.
Requirements on the virtual spec and on the specific provider are both applied, if
present. For instance with a configuration like:
.. code-block:: yaml
packages:
mpi:
require: 'mvapich2 %gcc'
mvapich2:
require: '~cuda'
you will use ``mvapich2~cuda %gcc`` as an ``mpi`` provider.
.. _package-preferences:
-------------------
Package Preferences
-------------------
In some cases package requirements can be too strong, and package
preferences are the better option. Package preferences do not impose
constraints on packages for particular versions or variants values,
they rather only set defaults. The concretizer is free to change
them if it must, due to other constraints, and also prefers reusing
installed packages over building new ones that are a better match for
preferences.
.. seealso::
FAQ: :ref:`Why does Spack pick particular versions and variants? <faq-concretizer-precedence>`
Most package preferences (``compilers``, ``target`` and ``providers``)
can only be set globally under the ``all`` section of ``packages.yaml``:
.. code-block:: yaml
packages:
all:
compiler: [gcc@12.2.0, clang@12:, oneapi@2023:]
target: [x86_64_v3]
providers:
mpi: [mvapich2, mpich, openmpi]
These preferences override Spack's default and effectively reorder priorities
when looking for the best compiler, target or virtual package provider. Each
preference takes an ordered list of spec constraints, with earlier entries in
the list being preferred over later entries.
In the example above all packages prefer to be compiled with ``gcc@12.2.0``,
to target the ``x86_64_v3`` microarchitecture and to use ``mvapich2`` if they
depend on ``mpi``.
The ``variants`` and ``version`` preferences can be set under
package specific sections of the ``packages.yaml`` file:
.. code-block:: yaml
packages:
opencv:
variants: +debug
gperftools:
version: [2.2, 2.4, 2.3]
In this case, the preference for ``opencv`` is to build with debug options, while
``gperftools`` prefers version 2.2 over 2.4.
Any preference can be overwritten on the command line if explicitly requested.
Preferences cannot overcome explicit constraints, as they only set a preferred
ordering among homogeneous attribute values. Going back to the example, if
``gperftools@2.3:`` was requested, then Spack will install version 2.4
since the most preferred version 2.2 is prohibited by the version constraint.
.. _package_permissions:
-------------------
Package Permissions
-------------------
Spack can be configured to assign permissions to the files installed
by a package.
In the ``packages.yaml`` file under ``permissions``, the attributes
``read``, ``write``, and ``group`` control the package
permissions. These attributes can be set per-package, or for all
packages under ``all``. If permissions are set under ``all`` and for a
specific package, the package-specific settings take precedence.
The ``read`` and ``write`` attributes take one of ``user``, ``group``,
and ``world``.
.. code-block:: yaml
packages:
all:
permissions:
write: group
group: spack
my_app:
permissions:
read: group
group: my_team
The permissions settings describe the broadest level of access to
installations of the specified packages. The execute permissions of
the file are set to the same level as read permissions for those files
that are executable. The default setting for ``read`` is ``world``,
and for ``write`` is ``user``. In the example above, installations of
``my_app`` will be installed with user and group permissions but no
world permissions, and owned by the group ``my_team``. All other
packages will be installed with user and group write privileges, and
world read privileges. Those packages will be owned by the group
``spack``.
The ``group`` attribute assigns a Unix-style group to a package. All
files installed by the package will be owned by the assigned group,
and the sticky group bit will be set on the install prefix and all
directories inside the install prefix. This will ensure that even
manually placed files within the install prefix are owned by the
assigned group. If no group is assigned, Spack will allow the OS
default behavior to go as expected.
----------------------------
Assigning Package Attributes
----------------------------
You can assign class-level attributes in the configuration:
.. code-block:: yaml
packages:
mpileaks:
package_attributes:
# Override existing attributes
url: http://www.somewhereelse.com/mpileaks-1.0.tar.gz
# ... or add new ones
x: 1
Attributes set this way will be accessible to any method executed
in the package.py file (e.g. the ``install()`` method). Values for these
attributes may be any value parseable by yaml.
These can only be applied to specific packages, not "all" or
virtual packages.

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@ -18,7 +18,7 @@
* Homepage: https://pypi.python.org/pypi/archspec
* Usage: Labeling, comparison and detection of microarchitectures
* Version: 0.2.2 (commit 1dc58a5776dd77e6fc6e4ba5626af5b1fb24996e)
* Version: 0.2.5-dev (commit cbb1fd5eb397a70d466e5160b393b87b0dbcc78f)
astunparse
----------------

View File

@ -1,2 +1,3 @@
"""Init file to avoid namespace packages"""
__version__ = "0.2.2"
__version__ = "0.2.4"

View File

@ -3,6 +3,7 @@
"""
import sys
from .cli import main
sys.exit(main())

View File

@ -46,7 +46,11 @@ def _make_parser() -> argparse.ArgumentParser:
def cpu() -> int:
"""Run the `archspec cpu` subcommand."""
print(archspec.cpu.host())
try:
print(archspec.cpu.host())
except FileNotFoundError as exc:
print(exc)
return 1
return 0

View File

@ -5,10 +5,14 @@
"""The "cpu" package permits to query and compare different
CPU microarchitectures.
"""
from .microarchitecture import Microarchitecture, UnsupportedMicroarchitecture
from .microarchitecture import TARGETS, generic_microarchitecture
from .microarchitecture import version_components
from .detect import host
from .detect import brand_string, host
from .microarchitecture import (
TARGETS,
Microarchitecture,
UnsupportedMicroarchitecture,
generic_microarchitecture,
version_components,
)
__all__ = [
"Microarchitecture",
@ -17,4 +21,5 @@
"generic_microarchitecture",
"host",
"version_components",
"brand_string",
]

View File

@ -4,15 +4,17 @@
# SPDX-License-Identifier: (Apache-2.0 OR MIT)
"""Detection of CPU microarchitectures"""
import collections
import functools
import os
import platform
import re
import struct
import subprocess
import warnings
from typing import Dict, List, Optional, Set, Tuple, Union
from .microarchitecture import generic_microarchitecture, TARGETS
from .schema import TARGETS_JSON
from ..vendor.cpuid.cpuid import CPUID
from .microarchitecture import TARGETS, Microarchitecture, generic_microarchitecture
from .schema import CPUID_JSON, TARGETS_JSON
#: Mapping from operating systems to chain of commands
#: to obtain a dictionary of raw info on the current cpu
@ -22,43 +24,51 @@
#: functions checking the compatibility of the host with a given target
COMPATIBILITY_CHECKS = {}
# Constants for commonly used architectures
X86_64 = "x86_64"
AARCH64 = "aarch64"
PPC64LE = "ppc64le"
PPC64 = "ppc64"
RISCV64 = "riscv64"
def info_dict(operating_system):
"""Decorator to mark functions that are meant to return raw info on
the current cpu.
def detection(operating_system: str):
"""Decorator to mark functions that are meant to return partial information on the current cpu.
Args:
operating_system (str or tuple): operating system for which the marked
function is a viable factory of raw info dictionaries.
operating_system: operating system where this function can be used.
"""
def decorator(factory):
INFO_FACTORY[operating_system].append(factory)
@functools.wraps(factory)
def _impl():
info = factory()
# Check that info contains a few mandatory fields
msg = 'field "{0}" is missing from raw info dictionary'
assert "vendor_id" in info, msg.format("vendor_id")
assert "flags" in info, msg.format("flags")
assert "model" in info, msg.format("model")
assert "model_name" in info, msg.format("model_name")
return info
return _impl
return factory
return decorator
@info_dict(operating_system="Linux")
def proc_cpuinfo():
"""Returns a raw info dictionary by parsing the first entry of
``/proc/cpuinfo``
"""
info = {}
def partial_uarch(
name: str = "",
vendor: str = "",
features: Optional[Set[str]] = None,
generation: int = 0,
cpu_part: str = "",
) -> Microarchitecture:
"""Construct a partial microarchitecture, from information gathered during system scan."""
return Microarchitecture(
name=name,
parents=[],
vendor=vendor,
features=features or set(),
compilers={},
generation=generation,
cpu_part=cpu_part,
)
@detection(operating_system="Linux")
def proc_cpuinfo() -> Microarchitecture:
"""Returns a partial Microarchitecture, obtained from scanning ``/proc/cpuinfo``"""
data = {}
with open("/proc/cpuinfo") as file: # pylint: disable=unspecified-encoding
for line in file:
key, separator, value = line.partition(":")
@ -70,11 +80,122 @@ def proc_cpuinfo():
#
# we are on a blank line separating two cpus. Exit early as
# we want to read just the first entry in /proc/cpuinfo
if separator != ":" and info:
if separator != ":" and data:
break
info[key.strip()] = value.strip()
return info
data[key.strip()] = value.strip()
architecture = _machine()
if architecture == X86_64:
return partial_uarch(
vendor=data.get("vendor_id", "generic"), features=_feature_set(data, key="flags")
)
if architecture == AARCH64:
return partial_uarch(
vendor=_canonicalize_aarch64_vendor(data),
features=_feature_set(data, key="Features"),
cpu_part=data.get("CPU part", ""),
)
if architecture in (PPC64LE, PPC64):
generation_match = re.search(r"POWER(\d+)", data.get("cpu", ""))
try:
generation = int(generation_match.group(1))
except AttributeError:
# There might be no match under emulated environments. For instance
# emulating a ppc64le with QEMU and Docker still reports the host
# /proc/cpuinfo and not a Power
generation = 0
return partial_uarch(generation=generation)
if architecture == RISCV64:
if data.get("uarch") == "sifive,u74-mc":
data["uarch"] = "u74mc"
return partial_uarch(name=data.get("uarch", RISCV64))
return generic_microarchitecture(architecture)
class CpuidInfoCollector:
"""Collects the information we need on the host CPU from cpuid"""
# pylint: disable=too-few-public-methods
def __init__(self):
self.cpuid = CPUID()
registers = self.cpuid.registers_for(**CPUID_JSON["vendor"]["input"])
self.highest_basic_support = registers.eax
self.vendor = struct.pack("III", registers.ebx, registers.edx, registers.ecx).decode(
"utf-8"
)
registers = self.cpuid.registers_for(**CPUID_JSON["highest_extension_support"]["input"])
self.highest_extension_support = registers.eax
self.features = self._features()
def _features(self):
result = set()
def check_features(data):
registers = self.cpuid.registers_for(**data["input"])
for feature_check in data["bits"]:
current = getattr(registers, feature_check["register"])
if self._is_bit_set(current, feature_check["bit"]):
result.add(feature_check["name"])
for call_data in CPUID_JSON["flags"]:
if call_data["input"]["eax"] > self.highest_basic_support:
continue
check_features(call_data)
for call_data in CPUID_JSON["extension-flags"]:
if call_data["input"]["eax"] > self.highest_extension_support:
continue
check_features(call_data)
return result
def _is_bit_set(self, register: int, bit: int) -> bool:
mask = 1 << bit
return register & mask > 0
def brand_string(self) -> Optional[str]:
"""Returns the brand string, if available."""
if self.highest_extension_support < 0x80000004:
return None
r1 = self.cpuid.registers_for(eax=0x80000002, ecx=0)
r2 = self.cpuid.registers_for(eax=0x80000003, ecx=0)
r3 = self.cpuid.registers_for(eax=0x80000004, ecx=0)
result = struct.pack(
"IIIIIIIIIIII",
r1.eax,
r1.ebx,
r1.ecx,
r1.edx,
r2.eax,
r2.ebx,
r2.ecx,
r2.edx,
r3.eax,
r3.ebx,
r3.ecx,
r3.edx,
).decode("utf-8")
return result.strip("\x00")
@detection(operating_system="Windows")
def cpuid_info():
"""Returns a partial Microarchitecture, obtained from running the cpuid instruction"""
architecture = _machine()
if architecture == X86_64:
data = CpuidInfoCollector()
return partial_uarch(vendor=data.vendor, features=data.features)
return generic_microarchitecture(architecture)
def _check_output(args, env):
@ -83,14 +204,25 @@ def _check_output(args, env):
return str(output.decode("utf-8"))
WINDOWS_MAPPING = {
"AMD64": X86_64,
"ARM64": AARCH64,
}
def _machine():
""" "Return the machine architecture we are on"""
"""Return the machine architecture we are on"""
operating_system = platform.system()
# If we are not on Darwin, trust what Python tells us
if operating_system != "Darwin":
# If we are not on Darwin or Windows, trust what Python tells us
if operating_system not in ("Darwin", "Windows"):
return platform.machine()
# Normalize windows specific names
if operating_system == "Windows":
platform_machine = platform.machine()
return WINDOWS_MAPPING.get(platform_machine, platform_machine)
# On Darwin it might happen that we are on M1, but using an interpreter
# built for x86_64. In that case "platform.machine() == 'x86_64'", so we
# need to fix that.
@ -103,54 +235,47 @@ def _machine():
if "Apple" in output:
# Note that a native Python interpreter on Apple M1 would return
# "arm64" instead of "aarch64". Here we normalize to the latter.
return "aarch64"
return AARCH64
return "x86_64"
return X86_64
@info_dict(operating_system="Darwin")
def sysctl_info_dict():
@detection(operating_system="Darwin")
def sysctl_info() -> Microarchitecture:
"""Returns a raw info dictionary parsing the output of sysctl."""
child_environment = _ensure_bin_usrbin_in_path()
def sysctl(*args):
def sysctl(*args: str) -> str:
return _check_output(["sysctl"] + list(args), env=child_environment).strip()
if _machine() == "x86_64":
flags = (
sysctl("-n", "machdep.cpu.features").lower()
+ " "
+ sysctl("-n", "machdep.cpu.leaf7_features").lower()
if _machine() == X86_64:
features = (
f'{sysctl("-n", "machdep.cpu.features").lower()} '
f'{sysctl("-n", "machdep.cpu.leaf7_features").lower()}'
)
info = {
"vendor_id": sysctl("-n", "machdep.cpu.vendor"),
"flags": flags,
"model": sysctl("-n", "machdep.cpu.model"),
"model name": sysctl("-n", "machdep.cpu.brand_string"),
}
else:
model = "unknown"
model_str = sysctl("-n", "machdep.cpu.brand_string").lower()
if "m2" in model_str:
model = "m2"
elif "m1" in model_str:
model = "m1"
elif "apple" in model_str:
model = "m1"
features = set(features.split())
info = {
"vendor_id": "Apple",
"flags": [],
"model": model,
"CPU implementer": "Apple",
"model name": sysctl("-n", "machdep.cpu.brand_string"),
}
return info
# Flags detected on Darwin turned to their linux counterpart
for darwin_flag, linux_flag in TARGETS_JSON["conversions"]["darwin_flags"].items():
if darwin_flag in features:
features.update(linux_flag.split())
return partial_uarch(vendor=sysctl("-n", "machdep.cpu.vendor"), features=features)
model = "unknown"
model_str = sysctl("-n", "machdep.cpu.brand_string").lower()
if "m2" in model_str:
model = "m2"
elif "m1" in model_str:
model = "m1"
elif "apple" in model_str:
model = "m1"
return partial_uarch(name=model, vendor="Apple")
def _ensure_bin_usrbin_in_path():
# Make sure that /sbin and /usr/sbin are in PATH as sysctl is
# usually found there
# Make sure that /sbin and /usr/sbin are in PATH as sysctl is usually found there
child_environment = dict(os.environ.items())
search_paths = child_environment.get("PATH", "").split(os.pathsep)
for additional_path in ("/sbin", "/usr/sbin"):
@ -160,22 +285,10 @@ def _ensure_bin_usrbin_in_path():
return child_environment
def adjust_raw_flags(info):
"""Adjust the flags detected on the system to homogenize
slightly different representations.
"""
# Flags detected on Darwin turned to their linux counterpart
flags = info.get("flags", [])
d2l = TARGETS_JSON["conversions"]["darwin_flags"]
for darwin_flag, linux_flag in d2l.items():
if darwin_flag in flags:
info["flags"] += " " + linux_flag
def adjust_raw_vendor(info):
"""Adjust the vendor field to make it human readable"""
if "CPU implementer" not in info:
return
def _canonicalize_aarch64_vendor(data: Dict[str, str]) -> str:
"""Adjust the vendor field to make it human-readable"""
if "CPU implementer" not in data:
return "generic"
# Mapping numeric codes to vendor (ARM). This list is a merge from
# different sources:
@ -185,43 +298,37 @@ def adjust_raw_vendor(info):
# https://github.com/gcc-mirror/gcc/blob/master/gcc/config/aarch64/aarch64-cores.def
# https://patchwork.kernel.org/patch/10524949/
arm_vendors = TARGETS_JSON["conversions"]["arm_vendors"]
arm_code = info["CPU implementer"]
if arm_code in arm_vendors:
info["CPU implementer"] = arm_vendors[arm_code]
arm_code = data["CPU implementer"]
return arm_vendors.get(arm_code, arm_code)
def raw_info_dictionary():
"""Returns a dictionary with information on the cpu of the current host.
def _feature_set(data: Dict[str, str], key: str) -> Set[str]:
return set(data.get(key, "").split())
This function calls all the viable factories one after the other until
there's one that is able to produce the requested information.
def detected_info() -> Microarchitecture:
"""Returns a partial Microarchitecture with information on the CPU of the current host.
This function calls all the viable factories one after the other until there's one that is
able to produce the requested information. Falls-back to a generic microarchitecture, if none
of the calls succeed.
"""
# pylint: disable=broad-except
info = {}
for factory in INFO_FACTORY[platform.system()]:
try:
info = factory()
return factory()
except Exception as exc:
warnings.warn(str(exc))
if info:
adjust_raw_flags(info)
adjust_raw_vendor(info)
break
return info
return generic_microarchitecture(_machine())
def compatible_microarchitectures(info):
"""Returns an unordered list of known micro-architectures that are
compatible with the info dictionary passed as argument.
Args:
info (dict): dictionary containing information on the host cpu
def compatible_microarchitectures(info: Microarchitecture) -> List[Microarchitecture]:
"""Returns an unordered list of known micro-architectures that are compatible with the
partial Microarchitecture passed as input.
"""
architecture_family = _machine()
# If a tester is not registered, be conservative and assume no known
# target is compatible with the host
# If a tester is not registered, assume no known target is compatible with the host
tester = COMPATIBILITY_CHECKS.get(architecture_family, lambda x, y: False)
return [x for x in TARGETS.values() if tester(info, x)] or [
generic_microarchitecture(architecture_family)
@ -230,8 +337,8 @@ def compatible_microarchitectures(info):
def host():
"""Detects the host micro-architecture and returns it."""
# Retrieve a dictionary with raw information on the host's cpu
info = raw_info_dictionary()
# Retrieve information on the host's cpu
info = detected_info()
# Get a list of possible candidates for this micro-architecture
candidates = compatible_microarchitectures(info)
@ -244,6 +351,10 @@ def sorting_fn(item):
generic_candidates = [c for c in candidates if c.vendor == "generic"]
best_generic = max(generic_candidates, key=sorting_fn)
# Relevant for AArch64. Filter on "cpu_part" if we have any match
if info.cpu_part != "" and any(c for c in candidates if info.cpu_part == c.cpu_part):
candidates = [c for c in candidates if info.cpu_part == c.cpu_part]
# Filter the candidates to be descendant of the best generic candidate.
# This is to avoid that the lack of a niche feature that can be disabled
# from e.g. BIOS prevents detection of a reasonably performant architecture
@ -258,16 +369,15 @@ def sorting_fn(item):
return max(candidates, key=sorting_fn)
def compatibility_check(architecture_family):
def compatibility_check(architecture_family: Union[str, Tuple[str, ...]]):
"""Decorator to register a function as a proper compatibility check.
A compatibility check function takes the raw info dictionary as a first
argument and an arbitrary target as the second argument. It returns True
if the target is compatible with the info dictionary, False otherwise.
A compatibility check function takes a partial Microarchitecture object as a first argument,
and an arbitrary target Microarchitecture as the second argument. It returns True if the
target is compatible with first argument, False otherwise.
Args:
architecture_family (str or tuple): architecture family for which
this test can be used, e.g. x86_64 or ppc64le etc.
architecture_family: architecture family for which this test can be used
"""
# Turn the argument into something iterable
if isinstance(architecture_family, str):
@ -280,86 +390,70 @@ def decorator(func):
return decorator
@compatibility_check(architecture_family=("ppc64le", "ppc64"))
@compatibility_check(architecture_family=(PPC64LE, PPC64))
def compatibility_check_for_power(info, target):
"""Compatibility check for PPC64 and PPC64LE architectures."""
basename = platform.machine()
generation_match = re.search(r"POWER(\d+)", info.get("cpu", ""))
try:
generation = int(generation_match.group(1))
except AttributeError:
# There might be no match under emulated environments. For instance
# emulating a ppc64le with QEMU and Docker still reports the host
# /proc/cpuinfo and not a Power
generation = 0
# We can use a target if it descends from our machine type and our
# generation (9 for POWER9, etc) is at least its generation.
arch_root = TARGETS[basename]
arch_root = TARGETS[_machine()]
return (
target == arch_root or arch_root in target.ancestors
) and target.generation <= generation
) and target.generation <= info.generation
@compatibility_check(architecture_family="x86_64")
@compatibility_check(architecture_family=X86_64)
def compatibility_check_for_x86_64(info, target):
"""Compatibility check for x86_64 architectures."""
basename = "x86_64"
vendor = info.get("vendor_id", "generic")
features = set(info.get("flags", "").split())
# We can use a target if it descends from our machine type, is from our
# vendor, and we have all of its features
arch_root = TARGETS[basename]
arch_root = TARGETS[X86_64]
return (
(target == arch_root or arch_root in target.ancestors)
and target.vendor in (vendor, "generic")
and target.features.issubset(features)
and target.vendor in (info.vendor, "generic")
and target.features.issubset(info.features)
)
@compatibility_check(architecture_family="aarch64")
@compatibility_check(architecture_family=AARCH64)
def compatibility_check_for_aarch64(info, target):
"""Compatibility check for AARCH64 architectures."""
basename = "aarch64"
features = set(info.get("Features", "").split())
vendor = info.get("CPU implementer", "generic")
# At the moment it's not clear how to detect compatibility with
# At the moment, it's not clear how to detect compatibility with
# a specific version of the architecture
if target.vendor == "generic" and target.name != "aarch64":
if target.vendor == "generic" and target.name != AARCH64:
return False
arch_root = TARGETS[basename]
arch_root = TARGETS[AARCH64]
arch_root_and_vendor = arch_root == target.family and target.vendor in (
vendor,
info.vendor,
"generic",
)
# On macOS it seems impossible to get all the CPU features
# with syctl info, but for ARM we can get the exact model
if platform.system() == "Darwin":
model_key = info.get("model", basename)
model = TARGETS[model_key]
model = TARGETS[info.name]
return arch_root_and_vendor and (target == model or target in model.ancestors)
return arch_root_and_vendor and target.features.issubset(features)
return arch_root_and_vendor and target.features.issubset(info.features)
@compatibility_check(architecture_family="riscv64")
@compatibility_check(architecture_family=RISCV64)
def compatibility_check_for_riscv64(info, target):
"""Compatibility check for riscv64 architectures."""
basename = "riscv64"
uarch = info.get("uarch")
# sifive unmatched board
if uarch == "sifive,u74-mc":
uarch = "u74mc"
# catch-all for unknown uarchs
else:
uarch = "riscv64"
arch_root = TARGETS[basename]
arch_root = TARGETS[RISCV64]
return (target == arch_root or arch_root in target.ancestors) and (
target == uarch or target.vendor == "generic"
target.name == info.name or target.vendor == "generic"
)
def brand_string() -> Optional[str]:
"""Returns the brand string of the host, if detected, or None."""
if platform.system() == "Darwin":
return _check_output(
["sysctl", "-n", "machdep.cpu.brand_string"], env=_ensure_bin_usrbin_in_path()
).strip()
if host().family == X86_64:
return CpuidInfoCollector().brand_string()
return None

View File

@ -2,9 +2,7 @@
# Archspec Project Developers. See the top-level COPYRIGHT file for details.
#
# SPDX-License-Identifier: (Apache-2.0 OR MIT)
"""Types and functions to manage information
on CPU microarchitectures.
"""
"""Types and functions to manage information on CPU microarchitectures."""
import functools
import platform
import re
@ -13,6 +11,7 @@
import archspec
import archspec.cpu.alias
import archspec.cpu.schema
from .alias import FEATURE_ALIASES
from .schema import LazyDictionary
@ -47,7 +46,7 @@ class Microarchitecture:
which has "broadwell" as a parent, supports running binaries
optimized for "broadwell".
vendor (str): vendor of the micro-architecture
features (list of str): supported CPU flags. Note that the semantic
features (set of str): supported CPU flags. Note that the semantic
of the flags in this field might vary among architectures, if
at all present. For instance x86_64 processors will list all
the flags supported by a given CPU while Arm processors will
@ -64,21 +63,24 @@ class Microarchitecture:
passed in as argument above.
* versions: versions that support this micro-architecture.
generation (int): generation of the micro-architecture, if
relevant.
generation (int): generation of the micro-architecture, if relevant.
cpu_part (str): cpu part of the architecture, if relevant.
"""
# pylint: disable=too-many-arguments
# pylint: disable=too-many-arguments,too-many-instance-attributes
#: Aliases for micro-architecture's features
feature_aliases = FEATURE_ALIASES
def __init__(self, name, parents, vendor, features, compilers, generation=0):
def __init__(self, name, parents, vendor, features, compilers, generation=0, cpu_part=""):
self.name = name
self.parents = parents
self.vendor = vendor
self.features = features
self.compilers = compilers
# Only relevant for PowerPC
self.generation = generation
# Only relevant for AArch64
self.cpu_part = cpu_part
# Cache the ancestor computation
self._ancestors = None
@ -110,6 +112,7 @@ def __eq__(self, other):
and self.parents == other.parents # avoid ancestors here
and self.compilers == other.compilers
and self.generation == other.generation
and self.cpu_part == other.cpu_part
)
@coerce_target_names
@ -142,7 +145,8 @@ def __repr__(self):
cls_name = self.__class__.__name__
fmt = (
cls_name + "({0.name!r}, {0.parents!r}, {0.vendor!r}, "
"{0.features!r}, {0.compilers!r}, {0.generation!r})"
"{0.features!r}, {0.compilers!r}, generation={0.generation!r}, "
"cpu_part={0.cpu_part!r})"
)
return fmt.format(self)
@ -180,24 +184,30 @@ def generic(self):
generics = [x for x in [self] + self.ancestors if x.vendor == "generic"]
return max(generics, key=lambda x: len(x.ancestors))
def to_dict(self, return_list_of_items=False):
"""Returns a dictionary representation of this object.
def to_dict(self):
"""Returns a dictionary representation of this object."""
return {
"name": str(self.name),
"vendor": str(self.vendor),
"features": sorted(str(x) for x in self.features),
"generation": self.generation,
"parents": [str(x) for x in self.parents],
"compilers": self.compilers,
"cpupart": self.cpu_part,
}
Args:
return_list_of_items (bool): if True returns an ordered list of
items instead of the dictionary
"""
list_of_items = [
("name", str(self.name)),
("vendor", str(self.vendor)),
("features", sorted(str(x) for x in self.features)),
("generation", self.generation),
("parents", [str(x) for x in self.parents]),
]
if return_list_of_items:
return list_of_items
return dict(list_of_items)
@staticmethod
def from_dict(data) -> "Microarchitecture":
"""Construct a microarchitecture from a dictionary representation."""
return Microarchitecture(
name=data["name"],
parents=[TARGETS[x] for x in data["parents"]],
vendor=data["vendor"],
features=set(data["features"]),
compilers=data.get("compilers", {}),
generation=data.get("generation", 0),
cpu_part=data.get("cpupart", ""),
)
def optimization_flags(self, compiler, version):
"""Returns a string containing the optimization flags that needs
@ -271,9 +281,7 @@ def tuplify(ver):
flags = flags_fmt.format(**compiler_entry)
return flags
msg = (
"cannot produce optimized binary for micro-architecture '{0}' with {1}@{2}"
)
msg = "cannot produce optimized binary for micro-architecture '{0}' with {1}@{2}"
if compiler_info:
versions = [x["versions"] for x in compiler_info]
msg += f' [supported compiler versions are {", ".join(versions)}]'
@ -289,9 +297,7 @@ def generic_microarchitecture(name):
Args:
name (str): name of the micro-architecture
"""
return Microarchitecture(
name, parents=[], vendor="generic", features=[], compilers={}
)
return Microarchitecture(name, parents=[], vendor="generic", features=set(), compilers={})
def version_components(version):
@ -344,9 +350,10 @@ def fill_target_from_dict(name, data, targets):
features = set(values["features"])
compilers = values.get("compilers", {})
generation = values.get("generation", 0)
cpu_part = values.get("cpupart", "")
targets[name] = Microarchitecture(
name, parents, vendor, features, compilers, generation
name, parents, vendor, features, compilers, generation=generation, cpu_part=cpu_part
)
known_targets = {}

View File

@ -7,7 +7,9 @@
"""
import collections.abc
import json
import os.path
import os
import pathlib
from typing import Tuple
class LazyDictionary(collections.abc.MutableMapping):
@ -46,21 +48,65 @@ def __len__(self):
return len(self.data)
def _load_json_file(json_file):
json_dir = os.path.join(os.path.dirname(__file__), "..", "json", "cpu")
json_dir = os.path.abspath(json_dir)
#: Environment variable that might point to a directory with a user defined JSON file
DIR_FROM_ENVIRONMENT = "ARCHSPEC_CPU_DIR"
def _factory():
filename = os.path.join(json_dir, json_file)
with open(filename, "r", encoding="utf-8") as file:
return json.load(file)
#: Environment variable that might point to a directory with extensions to JSON files
EXTENSION_DIR_FROM_ENVIRONMENT = "ARCHSPEC_EXTENSION_CPU_DIR"
return _factory
def _json_file(filename: str, allow_custom: bool = False) -> Tuple[pathlib.Path, pathlib.Path]:
"""Given a filename, returns the absolute path for the main JSON file, and an
optional absolute path for an extension JSON file.
Args:
filename: filename for the JSON file
allow_custom: if True, allows overriding the location where the file resides
"""
json_dir = pathlib.Path(__file__).parent / ".." / "json" / "cpu"
if allow_custom and DIR_FROM_ENVIRONMENT in os.environ:
json_dir = pathlib.Path(os.environ[DIR_FROM_ENVIRONMENT])
json_dir = json_dir.absolute()
json_file = json_dir / filename
extension_file = None
if allow_custom and EXTENSION_DIR_FROM_ENVIRONMENT in os.environ:
extension_dir = pathlib.Path(os.environ[EXTENSION_DIR_FROM_ENVIRONMENT])
extension_dir.absolute()
extension_file = extension_dir / filename
return json_file, extension_file
def _load(json_file: pathlib.Path, extension_file: pathlib.Path):
with open(json_file, "r", encoding="utf-8") as file:
data = json.load(file)
if not extension_file or not extension_file.exists():
return data
with open(extension_file, "r", encoding="utf-8") as file:
extension_data = json.load(file)
top_level_sections = list(data.keys())
for key in top_level_sections:
if key not in extension_data:
continue
data[key].update(extension_data[key])
return data
#: In memory representation of the data in microarchitectures.json,
#: loaded on first access
TARGETS_JSON = LazyDictionary(_load_json_file("microarchitectures.json"))
TARGETS_JSON = LazyDictionary(_load, *_json_file("microarchitectures.json", allow_custom=True))
#: JSON schema for microarchitectures.json, loaded on first access
SCHEMA = LazyDictionary(_load_json_file("microarchitectures_schema.json"))
TARGETS_JSON_SCHEMA = LazyDictionary(_load, *_json_file("microarchitectures_schema.json"))
#: Information on how to call 'cpuid' to get information on the HOST CPU
CPUID_JSON = LazyDictionary(_load, *_json_file("cpuid.json", allow_custom=True))
#: JSON schema for cpuid.json, loaded on first access
CPUID_JSON_SCHEMA = LazyDictionary(_load, *_json_file("cpuid_schema.json"))

View File

@ -9,11 +9,11 @@ language specific APIs.
Currently the repository contains the following JSON files:
```console
.
├── COPYRIGHT
└── cpu
   ├── microarchitectures.json # Contains information on CPU microarchitectures
   └── microarchitectures_schema.json # Schema for the file above
cpu/
├── cpuid.json # Contains information on CPUID calls to retrieve vendor and features on x86_64
├── cpuid_schema.json # Schema for the file above
├── microarchitectures.json # Contains information on CPU microarchitectures
└── microarchitectures_schema.json # Schema for the file above
```

File diff suppressed because it is too large Load Diff

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@ -0,0 +1,134 @@
{
"$schema": "http://json-schema.org/draft-07/schema#",
"title": "Schema for microarchitecture definitions and feature aliases",
"type": "object",
"additionalProperties": false,
"properties": {
"vendor": {
"type": "object",
"additionalProperties": false,
"properties": {
"description": {
"type": "string"
},
"input": {
"type": "object",
"additionalProperties": false,
"properties": {
"eax": {
"type": "integer"
},
"ecx": {
"type": "integer"
}
}
}
}
},
"highest_extension_support": {
"type": "object",
"additionalProperties": false,
"properties": {
"description": {
"type": "string"
},
"input": {
"type": "object",
"additionalProperties": false,
"properties": {
"eax": {
"type": "integer"
},
"ecx": {
"type": "integer"
}
}
}
}
},
"flags": {
"type": "array",
"items": {
"type": "object",
"additionalProperties": false,
"properties": {
"description": {
"type": "string"
},
"input": {
"type": "object",
"additionalProperties": false,
"properties": {
"eax": {
"type": "integer"
},
"ecx": {
"type": "integer"
}
}
},
"bits": {
"type": "array",
"items": {
"type": "object",
"additionalProperties": false,
"properties": {
"name": {
"type": "string"
},
"register": {
"type": "string"
},
"bit": {
"type": "integer"
}
}
}
}
}
}
},
"extension-flags": {
"type": "array",
"items": {
"type": "object",
"additionalProperties": false,
"properties": {
"description": {
"type": "string"
},
"input": {
"type": "object",
"additionalProperties": false,
"properties": {
"eax": {
"type": "integer"
},
"ecx": {
"type": "integer"
}
}
},
"bits": {
"type": "array",
"items": {
"type": "object",
"additionalProperties": false,
"properties": {
"name": {
"type": "string"
},
"register": {
"type": "string"
},
"bit": {
"type": "integer"
}
}
}
}
}
}
}
}
}

View File

@ -2225,10 +2225,14 @@
],
"nvhpc": [
{
"versions": "21.11:",
"versions": "21.11:23.8",
"name": "zen3",
"flags": "-tp {name}",
"warnings": "zen4 is not fully supported by nvhpc yet, falling back to zen3"
"warnings": "zen4 is not fully supported by nvhpc versions < 23.9, falling back to zen3"
},
{
"versions": "23.9:",
"flags": "-tp {name}"
}
]
}
@ -2711,7 +2715,8 @@
"flags": "-mcpu=thunderx2t99"
}
]
}
},
"cpupart": "0x0af"
},
"a64fx": {
"from": ["armv8.2a"],
@ -2779,7 +2784,8 @@
"flags": "-march=armv8.2-a+crc+crypto+fp16+sve"
}
]
}
},
"cpupart": "0x001"
},
"cortex_a72": {
"from": ["aarch64"],
@ -2816,7 +2822,8 @@
"flags" : "-mcpu=cortex-a72"
}
]
}
},
"cpupart": "0xd08"
},
"neoverse_n1": {
"from": ["cortex_a72", "armv8.2a"],
@ -2837,8 +2844,7 @@
"asimdrdm",
"lrcpc",
"dcpop",
"asimddp",
"ssbs"
"asimddp"
],
"compilers" : {
"gcc": [
@ -2902,7 +2908,8 @@
"flags": "-tp {name}"
}
]
}
},
"cpupart": "0xd0c"
},
"neoverse_v1": {
"from": ["neoverse_n1", "armv8.4a"],
@ -2926,8 +2933,6 @@
"lrcpc",
"dcpop",
"sha3",
"sm3",
"sm4",
"asimddp",
"sha512",
"sve",
@ -2936,9 +2941,6 @@
"uscat",
"ilrcpc",
"flagm",
"ssbs",
"paca",
"pacg",
"dcpodp",
"svei8mm",
"svebf16",
@ -3006,7 +3008,7 @@
},
{
"versions": "11:",
"flags" : "-march=armv8.4-a+sve+ssbs+fp16+bf16+crypto+i8mm+rng"
"flags" : "-march=armv8.4-a+sve+fp16+bf16+crypto+i8mm+rng"
},
{
"versions": "12:",
@ -3030,7 +3032,8 @@
"flags": "-tp {name}"
}
]
}
},
"cpupart": "0xd40"
},
"neoverse_v2": {
"from": ["neoverse_n1", "armv9.0a"],
@ -3054,35 +3057,22 @@
"lrcpc",
"dcpop",
"sha3",
"sm3",
"sm4",
"asimddp",
"sha512",
"sve",
"asimdfhm",
"dit",
"uscat",
"ilrcpc",
"flagm",
"ssbs",
"sb",
"paca",
"pacg",
"dcpodp",
"sve2",
"sveaes",
"svepmull",
"svebitperm",
"svesha3",
"svesm4",
"flagm2",
"frint",
"svei8mm",
"svebf16",
"i8mm",
"bf16",
"dgh",
"bti"
"bf16"
],
"compilers" : {
"gcc": [
@ -3107,15 +3097,19 @@
"flags" : "-march=armv8.5-a+sve -mtune=cortex-a76"
},
{
"versions": "10.0:11.99",
"versions": "10.0:11.3.99",
"flags" : "-march=armv8.5-a+sve+sve2+i8mm+bf16 -mtune=cortex-a77"
},
{
"versions": "11.4:11.99",
"flags" : "-mcpu=neoverse-v2"
},
{
"versions": "12.0:12.99",
"versions": "12.0:12.2.99",
"flags" : "-march=armv9-a+i8mm+bf16 -mtune=cortex-a710"
},
{
"versions": "13.0:",
"versions": "12.3:",
"flags" : "-mcpu=neoverse-v2"
}
],
@ -3150,7 +3144,112 @@
"flags": "-tp {name}"
}
]
}
},
"cpupart": "0xd4f"
},
"neoverse_n2": {
"from": ["neoverse_n1", "armv9.0a"],
"vendor": "ARM",
"features": [
"fp",
"asimd",
"evtstrm",
"aes",
"pmull",
"sha1",
"sha2",
"crc32",
"atomics",
"fphp",
"asimdhp",
"cpuid",
"asimdrdm",
"jscvt",
"fcma",
"lrcpc",
"dcpop",
"sha3",
"asimddp",
"sha512",
"sve",
"asimdfhm",
"uscat",
"ilrcpc",
"flagm",
"sb",
"dcpodp",
"sve2",
"flagm2",
"frint",
"svei8mm",
"svebf16",
"i8mm",
"bf16"
],
"compilers" : {
"gcc": [
{
"versions": "4.8:5.99",
"flags": "-march=armv8-a"
},
{
"versions": "6:6.99",
"flags" : "-march=armv8.1-a"
},
{
"versions": "7.0:7.99",
"flags" : "-march=armv8.2-a -mtune=cortex-a72"
},
{
"versions": "8.0:8.99",
"flags" : "-march=armv8.4-a+sve -mtune=cortex-a72"
},
{
"versions": "9.0:9.99",
"flags" : "-march=armv8.5-a+sve -mtune=cortex-a76"
},
{
"versions": "10.0:10.99",
"flags" : "-march=armv8.5-a+sve+sve2+i8mm+bf16 -mtune=cortex-a77"
},
{
"versions": "11.0:",
"flags" : "-mcpu=neoverse-n2"
}
],
"clang" : [
{
"versions": "9.0:10.99",
"flags" : "-march=armv8.5-a+sve"
},
{
"versions": "11.0:13.99",
"flags" : "-march=armv8.5-a+sve+sve2+i8mm+bf16"
},
{
"versions": "14.0:15.99",
"flags" : "-march=armv9-a+i8mm+bf16"
},
{
"versions": "16.0:",
"flags" : "-mcpu=neoverse-n2"
}
],
"arm" : [
{
"versions": "23.04.0:",
"flags" : "-mcpu=neoverse-n2"
}
],
"nvhpc" : [
{
"versions": "23.3:",
"name": "neoverse-n1",
"flags": "-tp {name}"
}
]
},
"cpupart": "0xd49"
},
"m1": {
"from": ["armv8.4a"],
@ -3216,7 +3315,8 @@
"flags" : "-mcpu=apple-m1"
}
]
}
},
"cpupart": "0x022"
},
"m2": {
"from": ["m1", "armv8.5a"],
@ -3294,7 +3394,8 @@
"flags" : "-mcpu=apple-m2"
}
]
}
},
"cpupart": "0x032"
},
"arm": {
"from": [],

View File

@ -52,6 +52,9 @@
}
}
}
},
"cpupart": {
"type": "string"
}
},
"required": [
@ -107,4 +110,4 @@
"additionalProperties": false
}
}
}
}

View File

@ -0,0 +1,20 @@
The MIT License (MIT)
Copyright (c) 2014 Anders Høst
Permission is hereby granted, free of charge, to any person obtaining a copy of
this software and associated documentation files (the "Software"), to deal in
the Software without restriction, including without limitation the rights to
use, copy, modify, merge, publish, distribute, sublicense, and/or sell copies of
the Software, and to permit persons to whom the Software is furnished to do so,
subject to the following conditions:
The above copyright notice and this permission notice shall be included in all
copies or substantial portions of the Software.
THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR
IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY, FITNESS
FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE AUTHORS OR
COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER LIABILITY, WHETHER
IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM, OUT OF OR IN
CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN THE SOFTWARE.

View File

@ -0,0 +1,76 @@
cpuid.py
========
Now, this is silly!
Pure Python library for accessing information about x86 processors
by querying the [CPUID](http://en.wikipedia.org/wiki/CPUID)
instruction. Well, not exactly pure Python...
It works by allocating a small piece of virtual memory, copying
a raw x86 function to that memory, giving the memory execute
permissions and then calling the memory as a function. The injected
function executes the CPUID instruction and copies the result back
to a ctypes.Structure where is can be read by Python.
It should work fine on both 32 and 64 bit versions of Windows and Linux
running x86 processors. Apple OS X and other BSD systems should also work,
not tested though...
Why?
----
For poops and giggles. Plus, having access to a low-level feature
without having to compile a C wrapper is pretty neat.
Examples
--------
Getting info with eax=0:
import cpuid
q = cpuid.CPUID()
eax, ebx, ecx, edx = q(0)
Running the files:
$ python example.py
Vendor ID : GenuineIntel
CPU name : Intel(R) Xeon(R) CPU W3550 @ 3.07GHz
Vector instructions supported:
SSE : Yes
SSE2 : Yes
SSE3 : Yes
SSSE3 : Yes
SSE4.1 : Yes
SSE4.2 : Yes
SSE4a : --
AVX : --
AVX2 : --
$ python cpuid.py
CPUID A B C D
00000000 0000000b 756e6547 6c65746e 49656e69
00000001 000106a5 00100800 009ce3bd bfebfbff
00000002 55035a01 00f0b2e4 00000000 09ca212c
00000003 00000000 00000000 00000000 00000000
00000004 00000000 00000000 00000000 00000000
00000005 00000040 00000040 00000003 00001120
00000006 00000003 00000002 00000001 00000000
00000007 00000000 00000000 00000000 00000000
00000008 00000000 00000000 00000000 00000000
00000009 00000000 00000000 00000000 00000000
0000000a 07300403 00000044 00000000 00000603
0000000b 00000000 00000000 00000095 00000000
80000000 80000008 00000000 00000000 00000000
80000001 00000000 00000000 00000001 28100800
80000002 65746e49 2952286c 6f655820 2952286e
80000003 55504320 20202020 20202020 57202020
80000004 30353533 20402020 37302e33 007a4847
80000005 00000000 00000000 00000000 00000000
80000006 00000000 00000000 01006040 00000000
80000007 00000000 00000000 00000000 00000100
80000008 00003024 00000000 00000000 00000000

View File

@ -0,0 +1,172 @@
# -*- coding: utf-8 -*-
#
# Copyright (c) 2024 Anders Høst
#
from __future__ import print_function
import platform
import os
import ctypes
from ctypes import c_uint32, c_long, c_ulong, c_size_t, c_void_p, POINTER, CFUNCTYPE
# Posix x86_64:
# Three first call registers : RDI, RSI, RDX
# Volatile registers : RAX, RCX, RDX, RSI, RDI, R8-11
# Windows x86_64:
# Three first call registers : RCX, RDX, R8
# Volatile registers : RAX, RCX, RDX, R8-11
# cdecl 32 bit:
# Three first call registers : Stack (%esp)
# Volatile registers : EAX, ECX, EDX
_POSIX_64_OPC = [
0x53, # push %rbx
0x89, 0xf0, # mov %esi,%eax
0x89, 0xd1, # mov %edx,%ecx
0x0f, 0xa2, # cpuid
0x89, 0x07, # mov %eax,(%rdi)
0x89, 0x5f, 0x04, # mov %ebx,0x4(%rdi)
0x89, 0x4f, 0x08, # mov %ecx,0x8(%rdi)
0x89, 0x57, 0x0c, # mov %edx,0xc(%rdi)
0x5b, # pop %rbx
0xc3 # retq
]
_WINDOWS_64_OPC = [
0x53, # push %rbx
0x89, 0xd0, # mov %edx,%eax
0x49, 0x89, 0xc9, # mov %rcx,%r9
0x44, 0x89, 0xc1, # mov %r8d,%ecx
0x0f, 0xa2, # cpuid
0x41, 0x89, 0x01, # mov %eax,(%r9)
0x41, 0x89, 0x59, 0x04, # mov %ebx,0x4(%r9)
0x41, 0x89, 0x49, 0x08, # mov %ecx,0x8(%r9)
0x41, 0x89, 0x51, 0x0c, # mov %edx,0xc(%r9)
0x5b, # pop %rbx
0xc3 # retq
]
_CDECL_32_OPC = [
0x53, # push %ebx
0x57, # push %edi
0x8b, 0x7c, 0x24, 0x0c, # mov 0xc(%esp),%edi
0x8b, 0x44, 0x24, 0x10, # mov 0x10(%esp),%eax
0x8b, 0x4c, 0x24, 0x14, # mov 0x14(%esp),%ecx
0x0f, 0xa2, # cpuid
0x89, 0x07, # mov %eax,(%edi)
0x89, 0x5f, 0x04, # mov %ebx,0x4(%edi)
0x89, 0x4f, 0x08, # mov %ecx,0x8(%edi)
0x89, 0x57, 0x0c, # mov %edx,0xc(%edi)
0x5f, # pop %edi
0x5b, # pop %ebx
0xc3 # ret
]
is_windows = os.name == "nt"
is_64bit = ctypes.sizeof(ctypes.c_voidp) == 8
class CPUID_struct(ctypes.Structure):
_register_names = ("eax", "ebx", "ecx", "edx")
_fields_ = [(r, c_uint32) for r in _register_names]
def __getitem__(self, item):
if item not in self._register_names:
raise KeyError(item)
return getattr(self, item)
def __repr__(self):
return "eax=0x{:x}, ebx=0x{:x}, ecx=0x{:x}, edx=0x{:x}".format(self.eax, self.ebx, self.ecx, self.edx)
class CPUID(object):
def __init__(self):
if platform.machine() not in ("AMD64", "x86_64", "x86", "i686"):
raise SystemError("Only available for x86")
if is_windows:
if is_64bit:
# VirtualAlloc seems to fail under some weird
# circumstances when ctypes.windll.kernel32 is
# used under 64 bit Python. CDLL fixes this.
self.win = ctypes.CDLL("kernel32.dll")
opc = _WINDOWS_64_OPC
else:
# Here ctypes.windll.kernel32 is needed to get the
# right DLL. Otherwise it will fail when running
# 32 bit Python on 64 bit Windows.
self.win = ctypes.windll.kernel32
opc = _CDECL_32_OPC
else:
opc = _POSIX_64_OPC if is_64bit else _CDECL_32_OPC
size = len(opc)
code = (ctypes.c_ubyte * size)(*opc)
if is_windows:
self.win.VirtualAlloc.restype = c_void_p
self.win.VirtualAlloc.argtypes = [ctypes.c_void_p, ctypes.c_size_t, ctypes.c_ulong, ctypes.c_ulong]
self.addr = self.win.VirtualAlloc(None, size, 0x1000, 0x40)
if not self.addr:
raise MemoryError("Could not allocate RWX memory")
ctypes.memmove(self.addr, code, size)
else:
from mmap import (
mmap,
MAP_PRIVATE,
MAP_ANONYMOUS,
PROT_WRITE,
PROT_READ,
PROT_EXEC,
)
self.mm = mmap(
-1,
size,
flags=MAP_PRIVATE | MAP_ANONYMOUS,
prot=PROT_WRITE | PROT_READ | PROT_EXEC,
)
self.mm.write(code)
self.addr = ctypes.addressof(ctypes.c_int.from_buffer(self.mm))
func_type = CFUNCTYPE(None, POINTER(CPUID_struct), c_uint32, c_uint32)
self.func_ptr = func_type(self.addr)
def __call__(self, eax, ecx=0):
struct = self.registers_for(eax=eax, ecx=ecx)
return struct.eax, struct.ebx, struct.ecx, struct.edx
def registers_for(self, eax, ecx=0):
"""Calls cpuid with eax and ecx set as the input arguments, and returns a structure
containing eax, ebx, ecx, and edx.
"""
struct = CPUID_struct()
self.func_ptr(struct, eax, ecx)
return struct
def __del__(self):
if is_windows:
self.win.VirtualFree.restype = c_long
self.win.VirtualFree.argtypes = [c_void_p, c_size_t, c_ulong]
self.win.VirtualFree(self.addr, 0, 0x8000)
else:
self.mm.close()
if __name__ == "__main__":
def valid_inputs():
cpuid = CPUID()
for eax in (0x0, 0x80000000):
highest, _, _, _ = cpuid(eax)
while eax <= highest:
regs = cpuid(eax)
yield (eax, regs)
eax += 1
print(" ".join(x.ljust(8) for x in ("CPUID", "A", "B", "C", "D")).strip())
for eax, regs in valid_inputs():
print("%08x" % eax, " ".join("%08x" % reg for reg in regs))

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@ -0,0 +1,62 @@
# -*- coding: utf-8 -*-
#
# Copyright (c) 2024 Anders Høst
#
from __future__ import print_function
import struct
import cpuid
def cpu_vendor(cpu):
_, b, c, d = cpu(0)
return struct.pack("III", b, d, c).decode("utf-8")
def cpu_name(cpu):
name = "".join((struct.pack("IIII", *cpu(0x80000000 + i)).decode("utf-8")
for i in range(2, 5)))
return name.split('\x00', 1)[0]
def is_set(cpu, leaf, subleaf, reg_idx, bit):
"""
@param {leaf} %eax
@param {sublead} %ecx, 0 in most cases
@param {reg_idx} idx of [%eax, %ebx, %ecx, %edx], 0-based
@param {bit} bit of reg selected by {reg_idx}, 0-based
"""
regs = cpu(leaf, subleaf)
if (1 << bit) & regs[reg_idx]:
return "Yes"
else:
return "--"
if __name__ == "__main__":
cpu = cpuid.CPUID()
print("Vendor ID : %s" % cpu_vendor(cpu))
print("CPU name : %s" % cpu_name(cpu))
print()
print("Vector instructions supported:")
print("SSE : %s" % is_set(cpu, 1, 0, 3, 25))
print("SSE2 : %s" % is_set(cpu, 1, 0, 3, 26))
print("SSE3 : %s" % is_set(cpu, 1, 0, 2, 0))
print("SSSE3 : %s" % is_set(cpu, 1, 0, 2, 9))
print("SSE4.1 : %s" % is_set(cpu, 1, 0, 2, 19))
print("SSE4.2 : %s" % is_set(cpu, 1, 0, 2, 20))
print("SSE4a : %s" % is_set(cpu, 0x80000001, 0, 2, 6))
print("AVX : %s" % is_set(cpu, 1, 0, 2, 28))
print("AVX2 : %s" % is_set(cpu, 7, 0, 1, 5))
print("BMI1 : %s" % is_set(cpu, 7, 0, 1, 3))
print("BMI2 : %s" % is_set(cpu, 7, 0, 1, 8))
# Intel RDT CMT/MBM
print("L3 Monitoring : %s" % is_set(cpu, 0xf, 0, 3, 1))
print("L3 Occupancy : %s" % is_set(cpu, 0xf, 1, 3, 0))
print("L3 Total BW : %s" % is_set(cpu, 0xf, 1, 3, 1))
print("L3 Local BW : %s" % is_set(cpu, 0xf, 1, 3, 2))

View File

@ -4,7 +4,7 @@
# SPDX-License-Identifier: (Apache-2.0 OR MIT)
#: PEP440 canonical <major>.<minor>.<micro>.<devN> string
__version__ = "0.21.0.dev0"
__version__ = "0.21.3"
spack_version = __version__

View File

@ -40,6 +40,7 @@ def _search_duplicate_compilers(error_cls):
import collections.abc
import glob
import inspect
import io
import itertools
import pathlib
import pickle
@ -54,6 +55,7 @@ def _search_duplicate_compilers(error_cls):
import spack.repo
import spack.spec
import spack.util.crypto
import spack.util.spack_yaml as syaml
import spack.variant
#: Map an audit tag to a list of callables implementing checks
@ -250,6 +252,88 @@ def _search_duplicate_specs_in_externals(error_cls):
return errors
@config_packages
def _deprecated_preferences(error_cls):
"""Search package preferences deprecated in v0.21 (and slated for removal in v0.22)"""
# TODO (v0.22): remove this audit as the attributes will not be allowed in config
errors = []
packages_yaml = spack.config.CONFIG.get_config("packages")
def make_error(attribute_name, config_data, summary):
s = io.StringIO()
s.write("Occurring in the following file:\n")
dict_view = syaml.syaml_dict((k, v) for k, v in config_data.items() if k == attribute_name)
syaml.dump_config(dict_view, stream=s, blame=True)
return error_cls(summary=summary, details=[s.getvalue()])
if "all" in packages_yaml and "version" in packages_yaml["all"]:
summary = "Using the deprecated 'version' attribute under 'packages:all'"
errors.append(make_error("version", packages_yaml["all"], summary))
for package_name in packages_yaml:
if package_name == "all":
continue
package_conf = packages_yaml[package_name]
for attribute in ("compiler", "providers", "target"):
if attribute not in package_conf:
continue
summary = (
f"Using the deprecated '{attribute}' attribute " f"under 'packages:{package_name}'"
)
errors.append(make_error(attribute, package_conf, summary))
return errors
@config_packages
def _avoid_mismatched_variants(error_cls):
"""Warns if variant preferences have mismatched types or names."""
errors = []
packages_yaml = spack.config.CONFIG.get_config("packages")
def make_error(config_data, summary):
s = io.StringIO()
s.write("Occurring in the following file:\n")
syaml.dump_config(config_data, stream=s, blame=True)
return error_cls(summary=summary, details=[s.getvalue()])
for pkg_name in packages_yaml:
# 'all:' must be more forgiving, since it is setting defaults for everything
if pkg_name == "all" or "variants" not in packages_yaml[pkg_name]:
continue
preferences = packages_yaml[pkg_name]["variants"]
if not isinstance(preferences, list):
preferences = [preferences]
for variants in preferences:
current_spec = spack.spec.Spec(variants)
pkg_cls = spack.repo.PATH.get_pkg_class(pkg_name)
for variant in current_spec.variants.values():
# Variant does not exist at all
if variant.name not in pkg_cls.variants:
summary = (
f"Setting a preference for the '{pkg_name}' package to the "
f"non-existing variant '{variant.name}'"
)
errors.append(make_error(preferences, summary))
continue
# Variant cannot accept this value
s = spack.spec.Spec(pkg_name)
try:
s.update_variant_validate(variant.name, variant.value)
except Exception:
summary = (
f"Setting the variant '{variant.name}' of the '{pkg_name}' package "
f"to the invalid value '{str(variant)}'"
)
errors.append(make_error(preferences, summary))
return errors
#: Sanity checks on package directives
package_directives = AuditClass(
group="packages",
@ -776,7 +860,7 @@ def _version_constraints_are_satisfiable_by_some_version_in_repo(pkgs, error_cls
)
except Exception:
summary = (
"{0}: dependency on {1} cannot be satisfied " "by known versions of {1.name}"
"{0}: dependency on {1} cannot be satisfied by known versions of {1.name}"
).format(pkg_name, s)
details = ["happening in " + filename]
if dependency_pkg_cls is not None:
@ -818,6 +902,53 @@ def _analyze_variants_in_directive(pkg, constraint, directive, error_cls):
return errors
@package_directives
def _named_specs_in_when_arguments(pkgs, error_cls):
"""Reports named specs in the 'when=' attribute of a directive.
Note that 'conflicts' is the only directive allowing that.
"""
errors = []
for pkg_name in pkgs:
pkg_cls = spack.repo.PATH.get_pkg_class(pkg_name)
def _extracts_errors(triggers, summary):
_errors = []
for trigger in list(triggers):
when_spec = spack.spec.Spec(trigger)
if when_spec.name is not None and when_spec.name != pkg_name:
details = [f"using '{trigger}', should be '^{trigger}'"]
_errors.append(error_cls(summary=summary, details=details))
return _errors
for dname, triggers in pkg_cls.dependencies.items():
summary = f"{pkg_name}: wrong 'when=' condition for the '{dname}' dependency"
errors.extend(_extracts_errors(triggers, summary))
for vname, (variant, triggers) in pkg_cls.variants.items():
summary = f"{pkg_name}: wrong 'when=' condition for the '{vname}' variant"
errors.extend(_extracts_errors(triggers, summary))
for provided, triggers in pkg_cls.provided.items():
summary = f"{pkg_name}: wrong 'when=' condition for the '{provided}' virtual"
errors.extend(_extracts_errors(triggers, summary))
for _, triggers in pkg_cls.requirements.items():
triggers = [when_spec for when_spec, _, _ in triggers]
summary = f"{pkg_name}: wrong 'when=' condition in 'requires' directive"
errors.extend(_extracts_errors(triggers, summary))
triggers = list(pkg_cls.patches)
summary = f"{pkg_name}: wrong 'when=' condition in 'patch' directives"
errors.extend(_extracts_errors(triggers, summary))
triggers = list(pkg_cls.resources)
summary = f"{pkg_name}: wrong 'when=' condition in 'resource' directives"
errors.extend(_extracts_errors(triggers, summary))
return llnl.util.lang.dedupe(errors)
#: Sanity checks on package directives
external_detection = AuditClass(
group="externals",

View File

@ -66,8 +66,10 @@
from spack.stage import Stage
from spack.util.executable import which
_build_cache_relative_path = "build_cache"
_build_cache_keys_relative_path = "_pgp"
BUILD_CACHE_RELATIVE_PATH = "build_cache"
BUILD_CACHE_KEYS_RELATIVE_PATH = "_pgp"
CURRENT_BUILD_CACHE_LAYOUT_VERSION = 1
FORWARD_COMPAT_BUILD_CACHE_LAYOUT_VERSION = 2
class BuildCacheDatabase(spack_db.Database):
@ -481,7 +483,7 @@ def _fetch_and_cache_index(self, mirror_url, cache_entry={}):
scheme = urllib.parse.urlparse(mirror_url).scheme
if scheme != "oci" and not web_util.url_exists(
url_util.join(mirror_url, _build_cache_relative_path, "index.json")
url_util.join(mirror_url, BUILD_CACHE_RELATIVE_PATH, "index.json")
):
return False
@ -600,6 +602,10 @@ def __init__(self, msg):
super().__init__(msg)
class InvalidMetadataFile(spack.error.SpackError):
pass
class UnsignedPackageException(spack.error.SpackError):
"""
Raised if installation of unsigned package is attempted without
@ -614,11 +620,11 @@ def compute_hash(data):
def build_cache_relative_path():
return _build_cache_relative_path
return BUILD_CACHE_RELATIVE_PATH
def build_cache_keys_relative_path():
return _build_cache_keys_relative_path
return BUILD_CACHE_KEYS_RELATIVE_PATH
def build_cache_prefix(prefix):
@ -1401,7 +1407,7 @@ def _build_tarball_in_stage_dir(spec: Spec, out_url: str, stage_dir: str, option
spec_dict = sjson.load(content)
else:
raise ValueError("{0} not a valid spec file type".format(spec_file))
spec_dict["buildcache_layout_version"] = 1
spec_dict["buildcache_layout_version"] = CURRENT_BUILD_CACHE_LAYOUT_VERSION
spec_dict["binary_cache_checksum"] = {"hash_algorithm": "sha256", "hash": checksum}
with open(specfile_path, "w") as outfile:
@ -1560,6 +1566,42 @@ def _delete_staged_downloads(download_result):
download_result["specfile_stage"].destroy()
def _get_valid_spec_file(path: str, max_supported_layout: int) -> Tuple[Dict, int]:
"""Read and validate a spec file, returning the spec dict with its layout version, or raising
InvalidMetadataFile if invalid."""
try:
with open(path, "rb") as f:
binary_content = f.read()
except OSError:
raise InvalidMetadataFile(f"No such file: {path}")
# In the future we may support transparently decompressing compressed spec files.
if binary_content[:2] == b"\x1f\x8b":
raise InvalidMetadataFile("Compressed spec files are not supported")
try:
as_string = binary_content.decode("utf-8")
if path.endswith(".json.sig"):
spec_dict = Spec.extract_json_from_clearsig(as_string)
else:
spec_dict = json.loads(as_string)
except Exception as e:
raise InvalidMetadataFile(f"Could not parse {path} due to: {e}") from e
# Ensure this version is not too new.
try:
layout_version = int(spec_dict.get("buildcache_layout_version", 0))
except ValueError as e:
raise InvalidMetadataFile("Could not parse layout version") from e
if layout_version > max_supported_layout:
raise InvalidMetadataFile(
f"Layout version {layout_version} is too new for this version of Spack"
)
return spec_dict, layout_version
def download_tarball(spec, unsigned=False, mirrors_for_spec=None):
"""
Download binary tarball for given package into stage area, returning
@ -1652,6 +1694,18 @@ def download_tarball(spec, unsigned=False, mirrors_for_spec=None):
try:
local_specfile_stage.fetch()
local_specfile_stage.check()
try:
_get_valid_spec_file(
local_specfile_stage.save_filename,
FORWARD_COMPAT_BUILD_CACHE_LAYOUT_VERSION,
)
except InvalidMetadataFile as e:
tty.warn(
f"Ignoring binary package for {spec.name}/{spec.dag_hash()[:7]} "
f"from {mirror} due to invalid metadata file: {e}"
)
local_specfile_stage.destroy()
continue
except Exception:
continue
local_specfile_stage.cache_local()
@ -1674,14 +1728,26 @@ def download_tarball(spec, unsigned=False, mirrors_for_spec=None):
else:
ext = "json.sig" if try_signed else "json"
specfile_path = url_util.join(mirror, _build_cache_relative_path, specfile_prefix)
specfile_path = url_util.join(mirror, BUILD_CACHE_RELATIVE_PATH, specfile_prefix)
specfile_url = f"{specfile_path}.{ext}"
spackfile_url = url_util.join(mirror, _build_cache_relative_path, tarball)
spackfile_url = url_util.join(mirror, BUILD_CACHE_RELATIVE_PATH, tarball)
local_specfile_stage = try_fetch(specfile_url)
if local_specfile_stage:
local_specfile_path = local_specfile_stage.save_filename
signature_verified = False
try:
_get_valid_spec_file(
local_specfile_path, FORWARD_COMPAT_BUILD_CACHE_LAYOUT_VERSION
)
except InvalidMetadataFile as e:
tty.warn(
f"Ignoring binary package for {spec.name}/{spec.dag_hash()[:7]} "
f"from {mirror} due to invalid metadata file: {e}"
)
local_specfile_stage.destroy()
continue
if try_signed and not unsigned:
# If we found a signed specfile at the root, try to verify
# the signature immediately. We will not download the
@ -1961,11 +2027,12 @@ def _extract_inner_tarball(spec, filename, extract_to, unsigned, remote_checksum
def _tar_strip_component(tar: tarfile.TarFile, prefix: str):
"""Strip the top-level directory `prefix` from the member names in a tarfile."""
"""Yield all members of tarfile that start with given prefix, and strip that prefix (including
symlinks)"""
# Including trailing /, otherwise we end up with absolute paths.
regex = re.compile(re.escape(prefix) + "/*")
# Remove the top-level directory from the member (link)names.
# Only yield members in the package prefix.
# Note: when a tarfile is created, relative in-prefix symlinks are
# expanded to matching member names of tarfile entries. So, we have
# to ensure that those are updated too.
@ -1973,12 +2040,14 @@ def _tar_strip_component(tar: tarfile.TarFile, prefix: str):
# them.
for m in tar.getmembers():
result = regex.match(m.name)
assert result is not None
if not result:
continue
m.name = m.name[result.end() :]
if m.linkname:
result = regex.match(m.linkname)
if result:
m.linkname = m.linkname[result.end() :]
yield m
def extract_tarball(spec, download_result, unsigned=False, force=False, timer=timer.NULL_TIMER):
@ -2001,24 +2070,16 @@ def extract_tarball(spec, download_result, unsigned=False, force=False, timer=ti
)
specfile_path = download_result["specfile_stage"].save_filename
with open(specfile_path, "r") as inputfile:
content = inputfile.read()
if specfile_path.endswith(".json.sig"):
spec_dict = Spec.extract_json_from_clearsig(content)
else:
spec_dict = sjson.load(content)
spec_dict, layout_version = _get_valid_spec_file(
specfile_path, FORWARD_COMPAT_BUILD_CACHE_LAYOUT_VERSION
)
bchecksum = spec_dict["binary_cache_checksum"]
filename = download_result["tarball_stage"].save_filename
signature_verified = download_result["signature_verified"]
tmpdir = None
if (
"buildcache_layout_version" not in spec_dict
or int(spec_dict["buildcache_layout_version"]) < 1
):
if layout_version == 0:
# Handle the older buildcache layout where the .spack file
# contains a spec json, maybe an .asc file (signature),
# and another tarball containing the actual install tree.
@ -2029,7 +2090,7 @@ def extract_tarball(spec, download_result, unsigned=False, force=False, timer=ti
_delete_staged_downloads(download_result)
shutil.rmtree(tmpdir)
raise e
else:
elif 1 <= layout_version <= 2:
# Newer buildcache layout: the .spack file contains just
# in the install tree, the signature, if it exists, is
# wrapped around the spec.json at the root. If sig verify
@ -2053,12 +2114,13 @@ def extract_tarball(spec, download_result, unsigned=False, force=False, timer=ti
raise NoChecksumException(
tarfile_path, size, contents, "sha256", expected, local_checksum
)
try:
with closing(tarfile.open(tarfile_path, "r")) as tar:
# Remove install prefix from tarfil to extract directly into spec.prefix
_tar_strip_component(tar, prefix=_ensure_common_prefix(tar))
tar.extractall(path=spec.prefix)
tar.extractall(
path=spec.prefix,
members=_tar_strip_component(tar, prefix=_ensure_common_prefix(tar)),
)
except Exception:
shutil.rmtree(spec.prefix, ignore_errors=True)
_delete_staged_downloads(download_result)
@ -2093,20 +2155,47 @@ def extract_tarball(spec, download_result, unsigned=False, force=False, timer=ti
def _ensure_common_prefix(tar: tarfile.TarFile) -> str:
# Get the shortest length directory.
common_prefix = min((e.name for e in tar.getmembers() if e.isdir()), key=len, default=None)
# Find the lowest `binary_distribution` file (hard-coded forward slash is on purpose).
binary_distribution = min(
(
e.name
for e in tar.getmembers()
if e.isfile() and e.name.endswith(".spack/binary_distribution")
),
key=len,
default=None,
)
if common_prefix is None:
raise ValueError("Tarball does not contain a common prefix")
if binary_distribution is None:
raise ValueError("Tarball is not a Spack package, missing binary_distribution file")
# Validate that each file starts with the prefix
pkg_path = pathlib.PurePosixPath(binary_distribution).parent.parent
# Even the most ancient Spack version has required to list the dir of the package itself, so
# guard against broken tarballs where `path.parent.parent` is empty.
if pkg_path == pathlib.PurePosixPath():
raise ValueError("Invalid tarball, missing package prefix dir")
pkg_prefix = str(pkg_path)
# Ensure all tar entries are in the pkg_prefix dir, and if they're not, they should be parent
# dirs of it.
has_prefix = False
for member in tar.getmembers():
if not member.name.startswith(common_prefix):
raise ValueError(
f"Tarball contains file {member.name} outside of prefix {common_prefix}"
)
stripped = member.name.rstrip("/")
if not (
stripped.startswith(pkg_prefix) or member.isdir() and pkg_prefix.startswith(stripped)
):
raise ValueError(f"Tarball contains file {stripped} outside of prefix {pkg_prefix}")
if member.isdir() and stripped == pkg_prefix:
has_prefix = True
return common_prefix
# This is technically not required, but let's be defensive about the existence of the package
# prefix dir.
if not has_prefix:
raise ValueError(f"Tarball does not contain a common prefix {pkg_prefix}")
return pkg_prefix
def install_root_node(spec, unsigned=False, force=False, sha256=None):
@ -2184,10 +2273,10 @@ def try_direct_fetch(spec, mirrors=None):
for mirror in binary_mirrors:
buildcache_fetch_url_json = url_util.join(
mirror.fetch_url, _build_cache_relative_path, specfile_name
mirror.fetch_url, BUILD_CACHE_RELATIVE_PATH, specfile_name
)
buildcache_fetch_url_signed_json = url_util.join(
mirror.fetch_url, _build_cache_relative_path, signed_specfile_name
mirror.fetch_url, BUILD_CACHE_RELATIVE_PATH, signed_specfile_name
)
try:
_, _, fs = web_util.read_from_url(buildcache_fetch_url_signed_json)
@ -2291,8 +2380,11 @@ def get_keys(install=False, trust=False, force=False, mirrors=None):
for mirror in mirror_collection.values():
fetch_url = mirror.fetch_url
# TODO: oci:// does not support signing.
if fetch_url.startswith("oci://"):
continue
keys_url = url_util.join(
fetch_url, _build_cache_relative_path, _build_cache_keys_relative_path
fetch_url, BUILD_CACHE_RELATIVE_PATH, BUILD_CACHE_KEYS_RELATIVE_PATH
)
keys_index = url_util.join(keys_url, "index.json")
@ -2357,7 +2449,7 @@ def push_keys(*mirrors, **kwargs):
for mirror in mirrors:
push_url = getattr(mirror, "push_url", mirror)
keys_url = url_util.join(
push_url, _build_cache_relative_path, _build_cache_keys_relative_path
push_url, BUILD_CACHE_RELATIVE_PATH, BUILD_CACHE_KEYS_RELATIVE_PATH
)
keys_local = url_util.local_file_path(keys_url)
@ -2495,11 +2587,11 @@ def download_buildcache_entry(file_descriptions, mirror_url=None):
)
if mirror_url:
mirror_root = os.path.join(mirror_url, _build_cache_relative_path)
mirror_root = os.path.join(mirror_url, BUILD_CACHE_RELATIVE_PATH)
return _download_buildcache_entry(mirror_root, file_descriptions)
for mirror in spack.mirror.MirrorCollection(binary=True).values():
mirror_root = os.path.join(mirror.fetch_url, _build_cache_relative_path)
mirror_root = os.path.join(mirror.fetch_url, BUILD_CACHE_RELATIVE_PATH)
if _download_buildcache_entry(mirror_root, file_descriptions):
return True
@ -2590,7 +2682,7 @@ def __init__(self, url, local_hash, urlopen=web_util.urlopen):
def get_remote_hash(self):
# Failure to fetch index.json.hash is not fatal
url_index_hash = url_util.join(self.url, _build_cache_relative_path, "index.json.hash")
url_index_hash = url_util.join(self.url, BUILD_CACHE_RELATIVE_PATH, "index.json.hash")
try:
response = self.urlopen(urllib.request.Request(url_index_hash, headers=self.headers))
except urllib.error.URLError:
@ -2611,7 +2703,7 @@ def conditional_fetch(self) -> FetchIndexResult:
return FetchIndexResult(etag=None, hash=None, data=None, fresh=True)
# Otherwise, download index.json
url_index = url_util.join(self.url, _build_cache_relative_path, "index.json")
url_index = url_util.join(self.url, BUILD_CACHE_RELATIVE_PATH, "index.json")
try:
response = self.urlopen(urllib.request.Request(url_index, headers=self.headers))
@ -2655,7 +2747,7 @@ def __init__(self, url, etag, urlopen=web_util.urlopen):
def conditional_fetch(self) -> FetchIndexResult:
# Just do a conditional fetch immediately
url = url_util.join(self.url, _build_cache_relative_path, "index.json")
url = url_util.join(self.url, BUILD_CACHE_RELATIVE_PATH, "index.json")
headers = {
"User-Agent": web_util.SPACK_USER_AGENT,
"If-None-Match": '"{}"'.format(self.etag),

View File

@ -213,7 +213,8 @@ def _root_spec(spec_str: str) -> str:
if str(spack.platforms.host()) == "darwin":
spec_str += " %apple-clang"
elif str(spack.platforms.host()) == "windows":
spec_str += " %msvc"
# TODO (johnwparent): Remove version constraint when clingo patch is up
spec_str += " %msvc@:19.37"
else:
spec_str += " %gcc"

View File

@ -324,19 +324,29 @@ def set_compiler_environment_variables(pkg, env):
# ttyout, ttyerr, etc.
link_dir = spack.paths.build_env_path
# Set SPACK compiler variables so that our wrapper knows what to call
# Set SPACK compiler variables so that our wrapper knows what to
# call. If there is no compiler configured then use a default
# wrapper which will emit an error if it is used.
if compiler.cc:
env.set("SPACK_CC", compiler.cc)
env.set("CC", os.path.join(link_dir, compiler.link_paths["cc"]))
else:
env.set("CC", os.path.join(link_dir, "cc"))
if compiler.cxx:
env.set("SPACK_CXX", compiler.cxx)
env.set("CXX", os.path.join(link_dir, compiler.link_paths["cxx"]))
else:
env.set("CC", os.path.join(link_dir, "c++"))
if compiler.f77:
env.set("SPACK_F77", compiler.f77)
env.set("F77", os.path.join(link_dir, compiler.link_paths["f77"]))
else:
env.set("F77", os.path.join(link_dir, "f77"))
if compiler.fc:
env.set("SPACK_FC", compiler.fc)
env.set("FC", os.path.join(link_dir, compiler.link_paths["fc"]))
else:
env.set("FC", os.path.join(link_dir, "fc"))
# Set SPACK compiler rpath flags so that our wrapper knows what to use
env.set("SPACK_CC_RPATH_ARG", compiler.cc_rpath_arg)
@ -743,15 +753,16 @@ def setup_package(pkg, dirty, context: Context = Context.BUILD):
set_compiler_environment_variables(pkg, env_mods)
set_wrapper_variables(pkg, env_mods)
tty.debug("setup_package: grabbing modifications from dependencies")
env_mods.extend(setup_context.get_env_modifications())
tty.debug("setup_package: collected all modifications from dependencies")
# architecture specific setup
# Platform specific setup goes before package specific setup. This is for setting
# defaults like MACOSX_DEPLOYMENT_TARGET on macOS.
platform = spack.platforms.by_name(pkg.spec.architecture.platform)
target = platform.target(pkg.spec.architecture.target)
platform.setup_platform_environment(pkg, env_mods)
tty.debug("setup_package: grabbing modifications from dependencies")
env_mods.extend(setup_context.get_env_modifications())
tty.debug("setup_package: collected all modifications from dependencies")
if context == Context.TEST:
env_mods.prepend_path("PATH", ".")
elif context == Context.BUILD and not dirty and not env_mods.is_unset("CPATH"):
@ -778,7 +789,7 @@ def setup_package(pkg, dirty, context: Context = Context.BUILD):
for mod in ["cray-mpich", "cray-libsci"]:
module("unload", mod)
if target.module_name:
if target and target.module_name:
load_module(target.module_name)
load_external_modules(pkg)
@ -1322,7 +1333,7 @@ def make_stack(tb, stack=None):
# don't provide context if the code is actually in the base classes.
obj = frame.f_locals["self"]
func = getattr(obj, tb.tb_frame.f_code.co_name, "")
if func:
if func and hasattr(func, "__qualname__"):
typename, *_ = func.__qualname__.partition(".")
if isinstance(obj, CONTEXT_BASES) and typename not in basenames:
break

View File

@ -9,11 +9,10 @@
import shutil
from os.path import basename, dirname, isdir
from llnl.util.filesystem import find_headers, find_libraries, join_path
from llnl.util.filesystem import find_headers, find_libraries, join_path, mkdirp
from llnl.util.link_tree import LinkTree
from spack.directives import conflicts, variant
from spack.package import mkdirp
from spack.util.environment import EnvironmentModifications
from spack.util.executable import Executable
@ -212,3 +211,7 @@ def link_flags(self):
@property
def ld_flags(self):
return "{0} {1}".format(self.search_flags, self.link_flags)
#: Tuple of Intel math libraries, exported to packages
INTEL_MATH_LIBRARIES = ("intel-mkl", "intel-oneapi-mkl", "intel-parallel-studio")

View File

@ -2,6 +2,8 @@
# Spack Project Developers. See the top-level COPYRIGHT file for details.
#
# SPDX-License-Identifier: (Apache-2.0 OR MIT)
import warnings
import llnl.util.tty as tty
import llnl.util.tty.colify
import llnl.util.tty.color as cl
@ -52,8 +54,10 @@ def setup_parser(subparser):
def configs(parser, args):
reports = spack.audit.run_group(args.subcommand)
_process_reports(reports)
with warnings.catch_warnings():
warnings.simplefilter("ignore")
reports = spack.audit.run_group(args.subcommand)
_process_reports(reports)
def packages(parser, args):

View File

@ -7,13 +7,14 @@
import glob
import hashlib
import json
import multiprocessing
import multiprocessing.pool
import os
import shutil
import sys
import tempfile
import urllib.request
from typing import Dict, List, Optional, Tuple
from typing import Dict, List, Optional, Tuple, Union
import llnl.util.tty as tty
from llnl.string import plural
@ -307,8 +308,30 @@ def _progress(i: int, total: int):
return ""
def _make_pool():
return multiprocessing.pool.Pool(determine_number_of_jobs(parallel=True))
class NoPool:
def map(self, func, args):
return [func(a) for a in args]
def starmap(self, func, args):
return [func(*a) for a in args]
def __enter__(self):
return self
def __exit__(self, *args):
pass
MaybePool = Union[multiprocessing.pool.Pool, NoPool]
def _make_pool() -> MaybePool:
"""Can't use threading because it's unsafe, and can't use spawned processes because of globals.
That leaves only forking"""
if multiprocessing.get_start_method() == "fork":
return multiprocessing.pool.Pool(determine_number_of_jobs(parallel=True))
else:
return NoPool()
def push_fn(args):
@ -591,7 +614,7 @@ def _push_oci(
image_ref: ImageReference,
installed_specs_with_deps: List[Spec],
tmpdir: str,
pool: multiprocessing.pool.Pool,
pool: MaybePool,
) -> List[str]:
"""Push specs to an OCI registry
@ -692,11 +715,10 @@ def _config_from_tag(image_ref: ImageReference, tag: str) -> Optional[dict]:
return config if "spec" in config else None
def _update_index_oci(
image_ref: ImageReference, tmpdir: str, pool: multiprocessing.pool.Pool
) -> None:
response = spack.oci.opener.urlopen(urllib.request.Request(url=image_ref.tags_url()))
spack.oci.opener.ensure_status(response, 200)
def _update_index_oci(image_ref: ImageReference, tmpdir: str, pool: MaybePool) -> None:
request = urllib.request.Request(url=image_ref.tags_url())
response = spack.oci.opener.urlopen(request)
spack.oci.opener.ensure_status(request, response, 200)
tags = json.load(response)["tags"]
# Fetch all image config files in parallel

View File

@ -0,0 +1,30 @@
# Copyright 2013-2023 Lawrence Livermore National Security, LLC and other
# Spack Project Developers. See the top-level COPYRIGHT file for details.
#
# SPDX-License-Identifier: (Apache-2.0 OR MIT)
import sys
from typing import List
import llnl.util.tty as tty
import spack.cmd
display_args = {"long": True, "show_flags": False, "variants": False, "indent": 4}
def confirm_action(specs: List[spack.spec.Spec], participle: str, noun: str):
"""Display the list of specs to be acted on and ask for confirmation.
Args:
specs: specs to be removed
participle: action expressed as a participle, e.g. "uninstalled"
noun: action expressed as a noun, e.g. "uninstallation"
"""
tty.msg(f"The following {len(specs)} packages will be {participle}:\n")
spack.cmd.display_specs(specs, **display_args)
print("")
answer = tty.get_yes_or_no("Do you want to proceed?", default=False)
if not answer:
tty.msg(f"Aborting {noun}")
sys.exit(0)

View File

@ -0,0 +1,103 @@
# Copyright 2013-2023 Lawrence Livermore National Security, LLC and other
# Spack Project Developers. See the top-level COPYRIGHT file for details.
#
# SPDX-License-Identifier: (Apache-2.0 OR MIT)
import argparse
import sys
from typing import List
import llnl.util.tty as tty
import spack.cmd
import spack.cmd.common.arguments as arguments
import spack.cmd.common.confirmation as confirmation
import spack.environment as ev
import spack.spec
description = "remove specs from the concretized lockfile of an environment"
section = "environments"
level = "long"
# Arguments for display_specs when we find ambiguity
display_args = {"long": True, "show_flags": False, "variants": False, "indent": 4}
def setup_parser(subparser):
subparser.add_argument(
"--root", action="store_true", help="deconcretize only specific environment roots"
)
arguments.add_common_arguments(subparser, ["yes_to_all", "specs"])
subparser.add_argument(
"-a",
"--all",
action="store_true",
dest="all",
help="deconcretize ALL specs that match each supplied spec",
)
def get_deconcretize_list(
args: argparse.Namespace, specs: List[spack.spec.Spec], env: ev.Environment
) -> List[spack.spec.Spec]:
"""
Get list of environment roots to deconcretize
"""
env_specs = [s for _, s in env.concretized_specs()]
to_deconcretize = []
errors = []
for s in specs:
if args.root:
# find all roots matching given spec
to_deconc = [e for e in env_specs if e.satisfies(s)]
else:
# find all roots matching or depending on a matching spec
to_deconc = [e for e in env_specs if any(d.satisfies(s) for d in e.traverse())]
if len(to_deconc) < 1:
tty.warn(f"No matching specs to deconcretize for {s}")
elif len(to_deconc) > 1 and not args.all:
errors.append((s, to_deconc))
to_deconcretize.extend(to_deconc)
if errors:
for spec, matching in errors:
tty.error(f"{spec} matches multiple concrete specs:")
sys.stderr.write("\n")
spack.cmd.display_specs(matching, output=sys.stderr, **display_args)
sys.stderr.write("\n")
sys.stderr.flush()
tty.die("Use '--all' to deconcretize all matching specs, or be more specific")
return to_deconcretize
def deconcretize_specs(args, specs):
env = spack.cmd.require_active_env(cmd_name="deconcretize")
if args.specs:
deconcretize_list = get_deconcretize_list(args, specs, env)
else:
deconcretize_list = [s for _, s in env.concretized_specs()]
if not args.yes_to_all:
confirmation.confirm_action(deconcretize_list, "deconcretized", "deconcretization")
with env.write_transaction():
for spec in deconcretize_list:
env.deconcretize(spec)
env.write()
def deconcretize(parser, args):
if not args.specs and not args.all:
tty.die(
"deconcretize requires at least one spec argument.",
" Use `spack deconcretize --all` to deconcretize ALL specs.",
)
specs = spack.cmd.parse_specs(args.specs) if args.specs else [any]
deconcretize_specs(args, specs)

View File

@ -6,6 +6,7 @@
import llnl.util.tty as tty
import spack.cmd.common.arguments
import spack.cmd.common.confirmation
import spack.cmd.uninstall
import spack.environment as ev
import spack.store
@ -41,6 +42,6 @@ def gc(parser, args):
return
if not args.yes_to_all:
spack.cmd.uninstall.confirm_removal(specs)
spack.cmd.common.confirmation.confirm_action(specs, "uninstalled", "uninstallation")
spack.cmd.uninstall.do_uninstall(specs, force=False)

View File

@ -61,7 +61,7 @@ def graph(parser, args):
args.dot = True
env = ev.active_environment()
if env:
specs = env.all_specs()
specs = env.concrete_roots()
else:
specs = spack.store.STORE.db.query()

View File

@ -3,6 +3,7 @@
#
# SPDX-License-Identifier: (Apache-2.0 OR MIT)
import sys
import textwrap
from itertools import zip_longest
@ -16,6 +17,7 @@
import spack.install_test
import spack.repo
import spack.spec
import spack.version
from spack.package_base import preferred_version
description = "get detailed information on a particular package"
@ -53,6 +55,7 @@ def setup_parser(subparser):
("--tags", print_tags.__doc__),
("--tests", print_tests.__doc__),
("--virtuals", print_virtuals.__doc__),
("--variants-by-name", "list variants in strict name order; don't group by condition"),
]
for opt, help_comment in options:
subparser.add_argument(opt, action="store_true", help=help_comment)
@ -77,35 +80,10 @@ def license(s):
class VariantFormatter:
def __init__(self, variants):
self.variants = variants
def __init__(self, pkg):
self.variants = pkg.variants
self.headers = ("Name [Default]", "When", "Allowed values", "Description")
# Formats
fmt_name = "{0} [{1}]"
# Initialize column widths with the length of the
# corresponding headers, as they cannot be shorter
# than that
self.column_widths = [len(x) for x in self.headers]
# Expand columns based on max line lengths
for k, e in variants.items():
v, w = e
candidate_max_widths = (
len(fmt_name.format(k, self.default(v))), # Name [Default]
len(str(w)),
len(v.allowed_values), # Allowed values
len(v.description), # Description
)
self.column_widths = (
max(self.column_widths[0], candidate_max_widths[0]),
max(self.column_widths[1], candidate_max_widths[1]),
max(self.column_widths[2], candidate_max_widths[2]),
max(self.column_widths[3], candidate_max_widths[3]),
)
# Don't let name or possible values be less than max widths
_, cols = tty.terminal_size()
max_name = min(self.column_widths[0], 30)
@ -137,6 +115,8 @@ def default(self, v):
def lines(self):
if not self.variants:
yield " None"
return
else:
yield " " + self.fmt % self.headers
underline = tuple([w * "=" for w in self.column_widths])
@ -271,15 +251,165 @@ def print_tests(pkg):
color.cprint(" None")
def print_variants(pkg):
def _fmt_value(v):
if v is None or isinstance(v, bool):
return str(v).lower()
else:
return str(v)
def _fmt_name_and_default(variant):
"""Print colorized name [default] for a variant."""
return color.colorize(f"@c{{{variant.name}}} @C{{[{_fmt_value(variant.default)}]}}")
def _fmt_when(when, indent):
return color.colorize(f"{indent * ' '}@B{{when}} {color.cescape(when)}")
def _fmt_variant_description(variant, width, indent):
"""Format a variant's description, preserving explicit line breaks."""
return "\n".join(
textwrap.fill(
line, width=width, initial_indent=indent * " ", subsequent_indent=indent * " "
)
for line in variant.description.split("\n")
)
def _fmt_variant(variant, max_name_default_len, indent, when=None, out=None):
out = out or sys.stdout
_, cols = tty.terminal_size()
name_and_default = _fmt_name_and_default(variant)
name_default_len = color.clen(name_and_default)
values = variant.values
if not isinstance(variant.values, (tuple, list, spack.variant.DisjointSetsOfValues)):
values = [variant.values]
# put 'none' first, sort the rest by value
sorted_values = sorted(values, key=lambda v: (v != "none", v))
pad = 4 # min padding between 'name [default]' and values
value_indent = (indent + max_name_default_len + pad) * " " # left edge of values
# This preserves any formatting (i.e., newlines) from how the description was
# written in package.py, but still wraps long lines for small terminals.
# This allows some packages to provide detailed help on their variants (see, e.g., gasnet).
formatted_values = "\n".join(
textwrap.wrap(
f"{', '.join(_fmt_value(v) for v in sorted_values)}",
width=cols - 2,
initial_indent=value_indent,
subsequent_indent=value_indent,
)
)
formatted_values = formatted_values[indent + name_default_len + pad :]
# name [default] value1, value2, value3, ...
padding = pad * " "
color.cprint(f"{indent * ' '}{name_and_default}{padding}@c{{{formatted_values}}}", stream=out)
# when <spec>
description_indent = indent + 4
if when is not None and when != spack.spec.Spec():
out.write(_fmt_when(when, description_indent - 2))
out.write("\n")
# description, preserving explicit line breaks from the way it's written in the package file
out.write(_fmt_variant_description(variant, cols - 2, description_indent))
out.write("\n")
def _variants_by_name_when(pkg):
"""Adaptor to get variants keyed by { name: { when: { [Variant...] } }."""
# TODO: replace with pkg.variants_by_name(when=True) when unified directive dicts are merged.
variants = {}
for name, (variant, whens) in sorted(pkg.variants.items()):
for when in whens:
variants.setdefault(name, {}).setdefault(when, []).append(variant)
return variants
def _variants_by_when_name(pkg):
"""Adaptor to get variants keyed by { when: { name: Variant } }"""
# TODO: replace with pkg.variants when unified directive dicts are merged.
variants = {}
for name, (variant, whens) in pkg.variants.items():
for when in whens:
variants.setdefault(when, {})[name] = variant
return variants
def _print_variants_header(pkg):
"""output variants"""
if not pkg.variants:
print(" None")
return
color.cprint("")
color.cprint(section_title("Variants:"))
formatter = VariantFormatter(pkg.variants)
for line in formatter.lines:
color.cprint(color.cescape(line))
variants_by_name = _variants_by_name_when(pkg)
# Calculate the max length of the "name [default]" part of the variant display
# This lets us know where to print variant values.
max_name_default_len = max(
color.clen(_fmt_name_and_default(variant))
for name, when_variants in variants_by_name.items()
for variants in when_variants.values()
for variant in variants
)
return max_name_default_len, variants_by_name
def _unconstrained_ver_first(item):
"""sort key that puts specs with open version ranges first"""
spec, _ = item
return (spack.version.any_version not in spec.versions, spec)
def print_variants_grouped_by_when(pkg):
max_name_default_len, _ = _print_variants_header(pkg)
indent = 4
variants = _variants_by_when_name(pkg)
for when, variants_by_name in sorted(variants.items(), key=_unconstrained_ver_first):
padded_values = max_name_default_len + 4
start_indent = indent
if when != spack.spec.Spec():
sys.stdout.write("\n")
sys.stdout.write(_fmt_when(when, indent))
sys.stdout.write("\n")
# indent names slightly inside 'when', but line up values
padded_values -= 2
start_indent += 2
for name, variant in sorted(variants_by_name.items()):
_fmt_variant(variant, padded_values, start_indent, None, out=sys.stdout)
def print_variants_by_name(pkg):
max_name_default_len, variants_by_name = _print_variants_header(pkg)
max_name_default_len += 4
indent = 4
for name, when_variants in variants_by_name.items():
for when, variants in sorted(when_variants.items(), key=_unconstrained_ver_first):
for variant in variants:
_fmt_variant(variant, max_name_default_len, indent, when, out=sys.stdout)
sys.stdout.write("\n")
def print_variants(pkg):
"""output variants"""
print_variants_grouped_by_when(pkg)
def print_versions(pkg):
@ -300,18 +430,24 @@ def print_versions(pkg):
pad = padder(pkg.versions, 4)
preferred = preferred_version(pkg)
url = ""
if pkg.has_code:
url = fs.for_package_version(pkg, preferred)
def get_url(version):
try:
return fs.for_package_version(pkg, version)
except spack.fetch_strategy.InvalidArgsError:
return "No URL"
url = get_url(preferred) if pkg.has_code else ""
line = version(" {0}".format(pad(preferred))) + color.cescape(url)
color.cprint(line)
color.cwrite(line)
print()
safe = []
deprecated = []
for v in reversed(sorted(pkg.versions)):
if pkg.has_code:
url = fs.for_package_version(pkg, v)
url = get_url(v)
if pkg.versions[v].get("deprecated", False):
deprecated.append((v, url))
else:
@ -384,7 +520,12 @@ def info(parser, args):
else:
color.cprint(" None")
color.cprint(section_title("Homepage: ") + pkg.homepage)
if getattr(pkg, "homepage"):
color.cprint(section_title("Homepage: ") + pkg.homepage)
_print_variants = (
print_variants_by_name if args.variants_by_name else print_variants_grouped_by_when
)
# Now output optional information in expected order
sections = [
@ -392,7 +533,7 @@ def info(parser, args):
(args.all or args.detectable, print_detectable),
(args.all or args.tags, print_tags),
(args.all or not args.no_versions, print_versions),
(args.all or not args.no_variants, print_variants),
(args.all or not args.no_variants, _print_variants),
(args.all or args.phases, print_phases),
(args.all or not args.no_dependencies, print_dependencies),
(args.all or args.virtuals, print_virtuals),

View File

@ -23,7 +23,7 @@
# tutorial configuration parameters
tutorial_branch = "releases/v0.20"
tutorial_branch = "releases/v0.21"
tutorial_mirror = "file:///mirror"
tutorial_key = os.path.join(spack.paths.share_path, "keys", "tutorial.pub")

View File

@ -11,10 +11,9 @@
import spack.cmd
import spack.cmd.common.arguments as arguments
import spack.cmd.common.confirmation as confirmation
import spack.environment as ev
import spack.error
import spack.package_base
import spack.repo
import spack.spec
import spack.store
import spack.traverse as traverse
@ -278,7 +277,7 @@ def uninstall_specs(args, specs):
return
if not args.yes_to_all:
confirm_removal(uninstall_list)
confirmation.confirm_action(uninstall_list, "uninstalled", "uninstallation")
# Uninstall everything on the list
do_uninstall(uninstall_list, args.force)
@ -292,21 +291,6 @@ def uninstall_specs(args, specs):
env.regenerate_views()
def confirm_removal(specs: List[spack.spec.Spec]):
"""Display the list of specs to be removed and ask for confirmation.
Args:
specs: specs to be removed
"""
tty.msg("The following {} packages will be uninstalled:\n".format(len(specs)))
spack.cmd.display_specs(specs, **display_args)
print("")
answer = tty.get_yes_or_no("Do you want to proceed?", default=False)
if not answer:
tty.msg("Aborting uninstallation")
sys.exit(0)
def uninstall(parser, args):
if not args.specs and not args.all:
tty.die(

View File

@ -112,16 +112,16 @@ def _to_dict(compiler):
def get_compiler_config(scope=None, init_config=True):
"""Return the compiler configuration for the specified architecture."""
config = spack.config.get("compilers", scope=scope) or []
config = spack.config.CONFIG.get("compilers", scope=scope) or []
if config or not init_config:
return config
merged_config = spack.config.get("compilers")
merged_config = spack.config.CONFIG.get("compilers")
if merged_config:
return config
_init_compiler_config(scope=scope)
config = spack.config.get("compilers", scope=scope)
config = spack.config.CONFIG.get("compilers", scope=scope)
return config
@ -154,6 +154,14 @@ def add_compilers_to_config(compilers, scope=None, init_config=True):
"""
compiler_config = get_compiler_config(scope, init_config)
for compiler in compilers:
if not compiler.cc:
tty.debug(f"{compiler.spec} does not have a C compiler")
if not compiler.cxx:
tty.debug(f"{compiler.spec} does not have a C++ compiler")
if not compiler.f77:
tty.debug(f"{compiler.spec} does not have a Fortran77 compiler")
if not compiler.fc:
tty.debug(f"{compiler.spec} does not have a Fortran compiler")
compiler_config.append(_to_dict(compiler))
spack.config.set("compilers", compiler_config, scope=scope)
@ -506,9 +514,10 @@ def get_compilers(config, cspec=None, arch_spec=None):
for items in config:
items = items["compiler"]
# NOTE: in principle this should be equality not satisfies, but config can still
# be written in old format gcc@10.1.0 instead of gcc@=10.1.0.
if cspec and not cspec.satisfies(items["spec"]):
# We might use equality here.
if cspec and not spack.spec.parse_with_version_concrete(
items["spec"], compiler=True
).satisfies(cspec):
continue
# If an arch spec is given, confirm that this compiler

View File

@ -9,6 +9,8 @@
import sys
from typing import Dict, List, Set
import archspec.cpu
import spack.compiler
import spack.operating_systems.windows_os
import spack.platforms
@ -185,6 +187,9 @@ def __init__(self, *args, **kwargs):
# get current platform architecture and format for vcvars argument
arch = spack.platforms.real_host().default.lower()
arch = arch.replace("-", "_")
if str(archspec.cpu.host().family) == "x86_64":
arch = "amd64"
self.vcvars_call = VCVarsInvocation(vcvars_script_path, arch, self.msvc_version)
env_cmds.append(self.vcvars_call)
# Below is a check for a valid fortran path

View File

@ -463,6 +463,8 @@ def _depends_on(pkg, spec, when=None, type=dt.DEFAULT_TYPES, patches=None):
dep_spec = spack.spec.Spec(spec)
if not dep_spec.name:
raise DependencyError("Invalid dependency specification in package '%s':" % pkg.name, spec)
elif dep_spec.name in ("c", "cxx", "fortran"): # forward compat for language deps
return
if pkg.name == dep_spec.name:
raise CircularReferenceError("Package '%s' cannot depend on itself." % pkg.name)

View File

@ -1358,7 +1358,7 @@ def concretize(self, force=False, tests=False):
# Remove concrete specs that no longer correlate to a user spec
for spec in set(self.concretized_user_specs) - set(self.user_specs):
self.deconcretize(spec)
self.deconcretize(spec, concrete=False)
# Pick the right concretization strategy
if self.unify == "when_possible":
@ -1373,15 +1373,36 @@ def concretize(self, force=False, tests=False):
msg = "concretization strategy not implemented [{0}]"
raise SpackEnvironmentError(msg.format(self.unify))
def deconcretize(self, spec):
def deconcretize(self, spec: spack.spec.Spec, concrete: bool = True):
"""
Remove specified spec from environment concretization
Arguments:
spec: Spec to deconcretize. This must be a root of the environment
concrete: If True, find all instances of spec as concrete in the environemnt.
If False, find a single instance of the abstract spec as root of the environment.
"""
# spec has to be a root of the environment
index = self.concretized_user_specs.index(spec)
dag_hash = self.concretized_order.pop(index)
del self.concretized_user_specs[index]
if concrete:
dag_hash = spec.dag_hash()
pairs = zip(self.concretized_user_specs, self.concretized_order)
filtered = [(spec, h) for spec, h in pairs if h != dag_hash]
# Cannot use zip and unpack two values; it fails if filtered is empty
self.concretized_user_specs = [s for s, _ in filtered]
self.concretized_order = [h for _, h in filtered]
else:
index = self.concretized_user_specs.index(spec)
dag_hash = self.concretized_order.pop(index)
del self.concretized_user_specs[index]
# If this was the only user spec that concretized to this concrete spec, remove it
if dag_hash not in self.concretized_order:
del self.specs_by_hash[dag_hash]
# if we deconcretized a dependency that doesn't correspond to a root, it
# won't be here.
if dag_hash in self.specs_by_hash:
del self.specs_by_hash[dag_hash]
def _get_specs_to_concretize(
self,
@ -1739,11 +1760,14 @@ def _env_modifications_for_view(
self, view: ViewDescriptor, reverse: bool = False
) -> spack.util.environment.EnvironmentModifications:
try:
mods = uenv.environment_modifications_for_specs(*self.concrete_roots(), view=view)
with spack.store.STORE.db.read_transaction():
installed_roots = [s for s in self.concrete_roots() if s.installed]
mods = uenv.environment_modifications_for_specs(*installed_roots, view=view)
except Exception as e:
# Failing to setup spec-specific changes shouldn't be a hard error.
tty.warn(
"couldn't load runtime environment due to {}: {}".format(e.__class__.__name__, e)
f"could not {'unload' if reverse else 'load'} runtime environment due "
f"to {e.__class__.__name__}: {e}"
)
return spack.util.environment.EnvironmentModifications()
return mods.reversed() if reverse else mods

View File

@ -380,14 +380,13 @@ def _print_timer(pre: str, pkg_id: str, timer: timer.BaseTimer) -> None:
def _install_from_cache(
pkg: "spack.package_base.PackageBase", cache_only: bool, explicit: bool, unsigned: bool = False
pkg: "spack.package_base.PackageBase", explicit: bool, unsigned: bool = False
) -> bool:
"""
Extract the package from binary cache
Install the package from binary cache
Args:
pkg: package to install from the binary cache
cache_only: only extract from binary cache
explicit: ``True`` if installing the package was explicitly
requested by the user, otherwise, ``False``
unsigned: ``True`` if binary package signatures to be checked,
@ -399,15 +398,11 @@ def _install_from_cache(
installed_from_cache = _try_install_from_binary_cache(
pkg, explicit, unsigned=unsigned, timer=t
)
pkg_id = package_id(pkg)
if not installed_from_cache:
pre = f"No binary for {pkg_id} found"
if cache_only:
tty.die(f"{pre} when cache-only specified")
tty.msg(f"{pre}: installing from source")
return False
t.stop()
pkg_id = package_id(pkg)
tty.debug(f"Successfully extracted {pkg_id} from binary cache")
_write_timer_json(pkg, t, True)
@ -1335,7 +1330,6 @@ def _prepare_for_install(self, task: BuildTask) -> None:
"""
install_args = task.request.install_args
keep_prefix = install_args.get("keep_prefix")
restage = install_args.get("restage")
# Make sure the package is ready to be locally installed.
self._ensure_install_ready(task.pkg)
@ -1367,10 +1361,6 @@ def _prepare_for_install(self, task: BuildTask) -> None:
else:
tty.debug(f"{task.pkg_id} is partially installed")
# Destroy the stage for a locally installed, non-DIYStage, package
if restage and task.pkg.stage.managed_by_spack:
task.pkg.stage.destroy()
if (
rec
and installed_in_db
@ -1671,11 +1661,16 @@ def _install_task(self, task: BuildTask, install_status: InstallStatus) -> None:
task.status = STATUS_INSTALLING
# Use the binary cache if requested
if use_cache and _install_from_cache(pkg, cache_only, explicit, unsigned):
self._update_installed(task)
if task.compiler:
self._add_compiler_package_to_config(pkg)
return
if use_cache:
if _install_from_cache(pkg, explicit, unsigned):
self._update_installed(task)
if task.compiler:
self._add_compiler_package_to_config(pkg)
return
elif cache_only:
raise InstallError("No binary found when cache-only was specified", pkg=pkg)
else:
tty.msg(f"No binary for {pkg_id} found: installing from source")
pkg.run_tests = tests if isinstance(tests, bool) else pkg.name in tests
@ -1691,6 +1686,10 @@ def _install_task(self, task: BuildTask, install_status: InstallStatus) -> None:
try:
self._setup_install_dir(pkg)
# Create stage object now and let it be serialized for the child process. That
# way monkeypatch in tests works correctly.
pkg.stage
# Create a child process to do the actual installation.
# Preserve verbosity settings across installs.
spack.package_base.PackageBase._verbose = spack.build_environment.start_build_process(
@ -2223,11 +2222,6 @@ def install(self) -> None:
if not keep_prefix and not action == InstallAction.OVERWRITE:
pkg.remove_prefix()
# The subprocess *may* have removed the build stage. Mark it
# not created so that the next time pkg.stage is invoked, we
# check the filesystem for it.
pkg.stage.created = False
# Perform basic task cleanup for the installed spec to
# include downgrading the write to a read lock
self._cleanup_task(pkg)
@ -2297,6 +2291,9 @@ def __init__(self, pkg: "spack.package_base.PackageBase", install_args: dict):
# whether to keep the build stage after installation
self.keep_stage = install_args.get("keep_stage", False)
# whether to restage
self.restage = install_args.get("restage", False)
# whether to skip the patch phase
self.skip_patch = install_args.get("skip_patch", False)
@ -2327,9 +2324,13 @@ def __init__(self, pkg: "spack.package_base.PackageBase", install_args: dict):
def run(self) -> bool:
"""Main entry point from ``build_process`` to kick off install in child."""
self.pkg.stage.keep = self.keep_stage
stage = self.pkg.stage
stage.keep = self.keep_stage
with self.pkg.stage:
if self.restage:
stage.destroy()
with stage:
self.timer.start("stage")
if not self.fake:

View File

@ -1016,14 +1016,16 @@ def _main(argv=None):
bootstrap_context = bootstrap.ensure_bootstrap_configuration()
with bootstrap_context:
return finish_parse_and_run(parser, cmd_name, args.command, env_format_error)
return finish_parse_and_run(parser, cmd_name, args, env_format_error)
def finish_parse_and_run(parser, cmd_name, cmd, env_format_error):
def finish_parse_and_run(parser, cmd_name, main_args, env_format_error):
"""Finish parsing after we know the command to run."""
# add the found command to the parser and re-run then re-parse
command = parser.add_command(cmd_name)
args, unknown = parser.parse_known_args(cmd)
args, unknown = parser.parse_known_args(main_args.command)
# we need to inherit verbose since the install command checks for it
args.verbose = main_args.verbose
# Now that we know what command this is and what its args are, determine
# whether we can continue with a bad environment and raise if not.

View File

@ -93,7 +93,7 @@ def _filter_compiler_wrappers_impl(pkg_or_builder):
replacements = []
for idx, (env_var, compiler_path) in enumerate(compiler_vars):
if env_var in os.environ:
if env_var in os.environ and compiler_path is not None:
# filter spack wrapper and links to spack wrapper in case
# build system runs realpath
wrapper = os.environ[env_var]

View File

@ -486,43 +486,35 @@ def excluded(self):
spec = self.spec
conf = self.module.configuration(self.name)
# Compute the list of include rules that match
include_rules = conf.get("include", [])
include_matches = [x for x in include_rules if spec.satisfies(x)]
# Compute the list of exclude rules that match
exclude_rules = conf.get("exclude", [])
exclude_matches = [x for x in exclude_rules if spec.satisfies(x)]
# Compute the list of matching include / exclude rules, and whether excluded as implicit
include_matches = [x for x in conf.get("include", []) if spec.satisfies(x)]
exclude_matches = [x for x in conf.get("exclude", []) if spec.satisfies(x)]
excluded_as_implicit = not self.explicit and conf.get("exclude_implicits", False)
def debug_info(line_header, match_list):
if match_list:
msg = "\t{0} : {1}".format(line_header, spec.cshort_spec)
tty.debug(msg)
tty.debug(f"\t{line_header} : {spec.cshort_spec}")
for rule in match_list:
tty.debug("\t\tmatches rule: {0}".format(rule))
tty.debug(f"\t\tmatches rule: {rule}")
debug_info("INCLUDE", include_matches)
debug_info("EXCLUDE", exclude_matches)
if not include_matches and exclude_matches:
return True
if excluded_as_implicit:
tty.debug(f"\tEXCLUDED_AS_IMPLICIT : {spec.cshort_spec}")
return False
return not include_matches and (exclude_matches or excluded_as_implicit)
@property
def hidden(self):
"""Returns True if the module has been hidden, False otherwise."""
# A few variables for convenience of writing the method
spec = self.spec
conf = self.module.configuration(self.name)
hidden_as_implicit = not self.explicit and conf.get(
"hide_implicits", conf.get("exclude_implicits", False)
)
hidden_as_implicit = not self.explicit and conf.get("hide_implicits", False)
if hidden_as_implicit:
tty.debug(f"\tHIDDEN_AS_IMPLICIT : {spec.cshort_spec}")
tty.debug(f"\tHIDDEN_AS_IMPLICIT : {self.spec.cshort_spec}")
return hidden_as_implicit

View File

@ -134,7 +134,7 @@ def upload_blob(
return True
# Otherwise, do another PUT request.
spack.oci.opener.ensure_status(response, 202)
spack.oci.opener.ensure_status(request, response, 202)
assert "Location" in response.headers
# Can be absolute or relative, joining handles both
@ -143,19 +143,16 @@ def upload_blob(
)
f.seek(0)
response = _urlopen(
Request(
url=upload_url,
method="PUT",
data=f,
headers={
"Content-Type": "application/octet-stream",
"Content-Length": str(file_size),
},
)
request = Request(
url=upload_url,
method="PUT",
data=f,
headers={"Content-Type": "application/octet-stream", "Content-Length": str(file_size)},
)
spack.oci.opener.ensure_status(response, 201)
response = _urlopen(request)
spack.oci.opener.ensure_status(request, response, 201)
# print elapsed time and # MB/s
_log_upload_progress(digest, file_size, time.time() - start)
@ -189,16 +186,16 @@ def upload_manifest(
if not tag:
ref = ref.with_digest(digest)
response = _urlopen(
Request(
url=ref.manifest_url(),
method="PUT",
data=data,
headers={"Content-Type": oci_manifest["mediaType"]},
)
request = Request(
url=ref.manifest_url(),
method="PUT",
data=data,
headers={"Content-Type": oci_manifest["mediaType"]},
)
spack.oci.opener.ensure_status(response, 201)
response = _urlopen(request)
spack.oci.opener.ensure_status(request, response, 201)
return digest, size

View File

@ -310,19 +310,15 @@ def http_error_401(self, req: Request, fp, code, msg, headers):
# Login failed, avoid infinite recursion where we go back and
# forth between auth server and registry
if hasattr(req, "login_attempted"):
raise urllib.error.HTTPError(
req.full_url, code, f"Failed to login to {req.full_url}: {msg}", headers, fp
raise spack.util.web.DetailedHTTPError(
req, code, f"Failed to login: {msg}", headers, fp
)
# On 401 Unauthorized, parse the WWW-Authenticate header
# to determine what authentication is required
if "WWW-Authenticate" not in headers:
raise urllib.error.HTTPError(
req.full_url,
code,
"Cannot login to registry, missing WWW-Authenticate header",
headers,
fp,
raise spack.util.web.DetailedHTTPError(
req, code, "Cannot login to registry, missing WWW-Authenticate header", headers, fp
)
header_value = headers["WWW-Authenticate"]
@ -330,8 +326,8 @@ def http_error_401(self, req: Request, fp, code, msg, headers):
try:
challenge = get_bearer_challenge(parse_www_authenticate(header_value))
except ValueError as e:
raise urllib.error.HTTPError(
req.full_url,
raise spack.util.web.DetailedHTTPError(
req,
code,
f"Cannot login to registry, malformed WWW-Authenticate header: {header_value}",
headers,
@ -340,8 +336,8 @@ def http_error_401(self, req: Request, fp, code, msg, headers):
# If there is no bearer challenge, we can't handle it
if not challenge:
raise urllib.error.HTTPError(
req.full_url,
raise spack.util.web.DetailedHTTPError(
req,
code,
f"Cannot login to registry, unsupported authentication scheme: {header_value}",
headers,
@ -356,8 +352,8 @@ def http_error_401(self, req: Request, fp, code, msg, headers):
timeout=req.timeout,
)
except ValueError as e:
raise urllib.error.HTTPError(
req.full_url,
raise spack.util.web.DetailedHTTPError(
req,
code,
f"Cannot login to registry, failed to obtain bearer token: {e}",
headers,
@ -412,13 +408,13 @@ def create_opener():
return opener
def ensure_status(response: HTTPResponse, status: int):
def ensure_status(request: urllib.request.Request, response: HTTPResponse, status: int):
"""Raise an error if the response status is not the expected one."""
if response.status == status:
return
raise urllib.error.HTTPError(
response.geturl(), response.status, response.reason, response.info(), None
raise spack.util.web.DetailedHTTPError(
request, response.status, response.reason, response.info(), None
)

View File

@ -143,6 +143,7 @@ def __init__(self):
"12": "monterey",
"13": "ventura",
"14": "sonoma",
"15": "sequoia",
}
version = macos_version()

View File

@ -49,6 +49,7 @@
from spack.build_systems.nmake import NMakePackage
from spack.build_systems.octave import OctavePackage
from spack.build_systems.oneapi import (
INTEL_MATH_LIBRARIES,
IntelOneApiLibraryPackage,
IntelOneApiPackage,
IntelOneApiStaticLibraryList,

View File

@ -24,8 +24,9 @@
import textwrap
import time
import traceback
import typing
import warnings
from typing import Any, Callable, Dict, Iterable, List, Optional, Tuple, Type, TypeVar
from typing import Any, Callable, Dict, Iterable, List, Optional, Set, Tuple, Type, TypeVar, Union
import llnl.util.filesystem as fsys
import llnl.util.tty as tty
@ -682,13 +683,13 @@ def __init__(self, spec):
@classmethod
def possible_dependencies(
cls,
transitive=True,
expand_virtuals=True,
transitive: bool = True,
expand_virtuals: bool = True,
depflag: dt.DepFlag = dt.ALL,
visited=None,
missing=None,
virtuals=None,
):
visited: Optional[dict] = None,
missing: Optional[dict] = None,
virtuals: Optional[set] = None,
) -> Dict[str, Set[str]]:
"""Return dict of possible dependencies of this package.
Args:
@ -2449,14 +2450,21 @@ def flatten_dependencies(spec, flat_dir):
dep_files.merge(flat_dir + "/" + name)
def possible_dependencies(*pkg_or_spec, **kwargs):
def possible_dependencies(
*pkg_or_spec: Union[str, spack.spec.Spec, typing.Type[PackageBase]],
transitive: bool = True,
expand_virtuals: bool = True,
depflag: dt.DepFlag = dt.ALL,
missing: Optional[dict] = None,
virtuals: Optional[set] = None,
) -> Dict[str, Set[str]]:
"""Get the possible dependencies of a number of packages.
See ``PackageBase.possible_dependencies`` for details.
"""
packages = []
for pos in pkg_or_spec:
if isinstance(pos, PackageMeta):
if isinstance(pos, PackageMeta) and issubclass(pos, PackageBase):
packages.append(pos)
continue
@ -2469,9 +2477,16 @@ def possible_dependencies(*pkg_or_spec, **kwargs):
else:
packages.append(pos.package_class)
visited = {}
visited: Dict[str, Set[str]] = {}
for pkg in packages:
pkg.possible_dependencies(visited=visited, **kwargs)
pkg.possible_dependencies(
visited=visited,
transitive=transitive,
expand_virtuals=expand_virtuals,
depflag=depflag,
missing=missing,
virtuals=virtuals,
)
return visited

View File

@ -490,7 +490,7 @@ def read(self, stream):
self.index = spack.tag.TagIndex.from_json(stream, self.repository)
def update(self, pkg_fullname):
self.index.update_package(pkg_fullname)
self.index.update_package(pkg_fullname.split(".")[-1])
def write(self, stream):
self.index.to_json(stream)

View File

@ -18,9 +18,7 @@
#: IS ADDED IMMEDIATELY BELOW THE MODULE TYPE ATTRIBUTE
spec_regex = (
r"(?!hierarchy|core_specs|verbose|hash_length|defaults|filter_hierarchy_specs|hide|"
r"whitelist|blacklist|" # DEPRECATED: remove in 0.20.
r"include|exclude|" # use these more inclusive/consistent options
r"projections|naming_scheme|core_compilers|all)(^\w[\w-]*)"
r"include|exclude|projections|naming_scheme|core_compilers|all)(^\w[\w-]*)"
)
#: Matches a valid name for a module set
@ -46,14 +44,7 @@
"default": {},
"additionalProperties": False,
"properties": {
# DEPRECATED: remove in 0.20.
"environment_blacklist": {
"type": "array",
"default": [],
"items": {"type": "string"},
},
# use exclude_env_vars instead
"exclude_env_vars": {"type": "array", "default": [], "items": {"type": "string"}},
"exclude_env_vars": {"type": "array", "default": [], "items": {"type": "string"}}
},
},
"template": {"type": "string"},
@ -80,11 +71,6 @@
"properties": {
"verbose": {"type": "boolean", "default": False},
"hash_length": {"type": "integer", "minimum": 0, "default": 7},
# DEPRECATED: remove in 0.20.
"whitelist": array_of_strings,
"blacklist": array_of_strings,
"blacklist_implicits": {"type": "boolean", "default": False},
# whitelist/blacklist have been replaced with include/exclude
"include": array_of_strings,
"exclude": array_of_strings,
"exclude_implicits": {"type": "boolean", "default": False},
@ -188,52 +174,3 @@
"additionalProperties": False,
"properties": properties,
}
# deprecated keys and their replacements
old_to_new_key = {"exclude_implicits": "hide_implicits"}
def update_keys(data, key_translations):
"""Change blacklist/whitelist to exclude/include.
Arguments:
data (dict): data from a valid modules configuration.
key_translations (dict): A dictionary of keys to translate to
their respective values.
Return:
(bool) whether anything was changed in data
"""
changed = False
if isinstance(data, dict):
keys = list(data.keys())
for key in keys:
value = data[key]
translation = key_translations.get(key)
if translation:
data[translation] = data.pop(key)
changed = True
changed |= update_keys(value, key_translations)
elif isinstance(data, list):
for elt in data:
changed |= update_keys(elt, key_translations)
return changed
def update(data):
"""Update the data in place to remove deprecated properties.
Args:
data (dict): dictionary to be updated
Returns:
True if data was changed, False otherwise
"""
# translate blacklist/whitelist to exclude/include
return update_keys(data, old_to_new_key)

View File

@ -69,6 +69,8 @@
"patternProperties": {r"\w+": {}},
}
REQUIREMENT_URL = "https://spack.readthedocs.io/en/latest/packages_yaml.html#package-requirements"
#: Properties for inclusion in other schemas
properties = {
"packages": {
@ -117,7 +119,7 @@
"properties": ["version"],
"message": "setting version preferences in the 'all' section of packages.yaml "
"is deprecated and will be removed in v0.22\n\n\tThese preferences "
"will be ignored by Spack. You can set them only in package specific sections "
"will be ignored by Spack. You can set them only in package-specific sections "
"of the same file.\n",
"error": False,
},
@ -162,10 +164,14 @@
},
"deprecatedProperties": {
"properties": ["target", "compiler", "providers"],
"message": "setting compiler, target or provider preferences in a package "
"specific section of packages.yaml is deprecated, and will be removed in "
"v0.22.\n\n\tThese preferences will be ignored by Spack. You "
"can set them only in the 'all' section of the same file.\n",
"message": "setting 'compiler:', 'target:' or 'provider:' preferences in "
"a package-specific section of packages.yaml is deprecated, and will be "
"removed in v0.22.\n\n\tThese preferences will be ignored by Spack, and "
"can be set only in the 'all' section of the same file. "
"You can run:\n\n\t\t$ spack audit configs\n\n\tto get better diagnostics, "
"including files:lines where the deprecated attributes are used.\n\n"
"\tUse requirements to enforce conditions on specific packages: "
f"{REQUIREMENT_URL}\n",
"error": False,
},
}

View File

@ -12,6 +12,7 @@
import pprint
import re
import types
import typing
import warnings
from typing import Callable, Dict, List, NamedTuple, Optional, Sequence, Set, Tuple, Union
@ -379,7 +380,7 @@ def check_packages_exist(specs):
for spec in specs:
for s in spec.traverse():
try:
check_passed = repo.exists(s.name) or repo.is_virtual(s.name)
check_passed = repo.repo_for_pkg(s).exists(s.name) or repo.is_virtual(s.name)
except Exception as e:
msg = "Cannot find package: {0}".format(str(e))
check_passed = False
@ -713,7 +714,7 @@ def _get_cause_tree(
(condition_id, set_id) in which the latter idea means that the condition represented by
the former held in the condition set represented by the latter.
"""
seen = set(seen) | set(cause)
seen.add(cause)
parents = [c for e, c in condition_causes if e == cause and c not in seen]
local = "required because %s " % conditions[cause[0]]
@ -812,7 +813,14 @@ def on_model(model):
errors = sorted(
[(int(priority), msg, args) for priority, msg, *args in error_args], reverse=True
)
msg = self.message(errors)
try:
msg = self.message(errors)
except Exception as e:
msg = (
f"unexpected error during concretization [{str(e)}]. "
f"Please report a bug at https://github.com/spack/spack/issues"
)
raise spack.error.SpackError(msg)
raise UnsatisfiableSpecError(msg)
@ -1006,14 +1014,6 @@ def on_model(model):
# record the possible dependencies in the solve
result.possible_dependencies = setup.pkgs
# print any unknown functions in the model
for sym in best_model:
if sym.name not in ("attr", "error", "opt_criterion"):
tty.debug(
"UNKNOWN SYMBOL: %s(%s)"
% (sym.name, ", ".join([str(s) for s in intermediate_repr(sym.arguments)]))
)
elif cores:
result.control = self.control
result.cores.extend(cores)
@ -1118,11 +1118,8 @@ def __init__(self, tests=False):
self.reusable_and_possible = ConcreteSpecsByHash()
# id for dummy variables
self._condition_id_counter = itertools.count()
self._trigger_id_counter = itertools.count()
self._id_counter = itertools.count()
self._trigger_cache = collections.defaultdict(dict)
self._effect_id_counter = itertools.count()
self._effect_cache = collections.defaultdict(dict)
# Caches to optimize the setup phase of the solver
@ -1136,6 +1133,7 @@ def __init__(self, tests=False):
# Set during the call to setup
self.pkgs = None
self.explicitly_required_namespaces = {}
def pkg_version_rules(self, pkg):
"""Output declared versions of a package.
@ -1148,7 +1146,9 @@ def key_fn(version):
# Origins are sorted by "provenance" first, see the Provenance enumeration above
return version.origin, version.idx
pkg = packagize(pkg)
if isinstance(pkg, str):
pkg = self.pkg_class(pkg)
declared_versions = self.declared_versions[pkg.name]
partially_sorted_versions = sorted(set(declared_versions), key=key_fn)
@ -1340,7 +1340,10 @@ def _rule_from_str(
)
def pkg_rules(self, pkg, tests):
pkg = packagize(pkg)
pkg = self.pkg_class(pkg)
# Namespace of the package
self.gen.fact(fn.pkg_fact(pkg.name, fn.namespace(pkg.namespace)))
# versions
self.pkg_version_rules(pkg)
@ -1518,7 +1521,7 @@ def condition(
# In this way, if a condition can't be emitted but the exception is handled in the caller,
# we won't emit partial facts.
condition_id = next(self._condition_id_counter)
condition_id = next(self._id_counter)
self.gen.fact(fn.pkg_fact(named_cond.name, fn.condition(condition_id)))
self.gen.fact(fn.condition_reason(condition_id, msg))
@ -1526,7 +1529,7 @@ def condition(
named_cond_key = (str(named_cond), transform_required)
if named_cond_key not in cache:
trigger_id = next(self._trigger_id_counter)
trigger_id = next(self._id_counter)
requirements = self.spec_clauses(named_cond, body=True, required_from=name)
if transform_required:
@ -1542,7 +1545,7 @@ def condition(
cache = self._effect_cache[named_cond.name]
imposed_spec_key = (str(imposed_spec), transform_imposed)
if imposed_spec_key not in cache:
effect_id = next(self._effect_id_counter)
effect_id = next(self._id_counter)
requirements = self.spec_clauses(imposed_spec, body=False, required_from=name)
if transform_imposed:
@ -1673,9 +1676,10 @@ def provider_requirements(self):
rules = self._rules_from_requirements(
virtual_str, requirements, kind=RequirementKind.VIRTUAL
)
self.emit_facts_from_requirement_rules(rules)
self.trigger_rules()
self.effect_rules()
if rules:
self.emit_facts_from_requirement_rules(rules)
self.trigger_rules()
self.effect_rules()
def emit_facts_from_requirement_rules(self, rules: List[RequirementRule]):
"""Generate facts to enforce requirements.
@ -1802,15 +1806,12 @@ def external_packages(self):
for local_idx, spec in enumerate(external_specs):
msg = "%s available as external when satisfying %s" % (spec.name, spec)
def external_imposition(input_spec, _):
return [fn.attr("external_conditions_hold", input_spec.name, local_idx)]
def external_imposition(input_spec, requirements):
return requirements + [
fn.attr("external_conditions_hold", input_spec.name, local_idx)
]
self.condition(
spec,
spack.spec.Spec(spec.name),
msg=msg,
transform_imposed=external_imposition,
)
self.condition(spec, spec, msg=msg, transform_imposed=external_imposition)
self.possible_versions[spec.name].add(spec.version)
self.gen.newline()
@ -1832,7 +1833,13 @@ def preferred_variants(self, pkg_name):
# perform validation of the variant and values
spec = spack.spec.Spec(pkg_name)
spec.update_variant_validate(variant_name, values)
try:
spec.update_variant_validate(variant_name, values)
except (spack.variant.InvalidVariantValueError, KeyError, ValueError) as e:
tty.debug(
f"[SETUP]: rejected {str(variant)} as a preference for {pkg_name}: {str(e)}"
)
continue
for value in values:
self.variant_values_from_specs.add((pkg_name, variant.name, value))
@ -1922,7 +1929,7 @@ class Head:
node_flag = fn.attr("node_flag_set")
node_flag_source = fn.attr("node_flag_source")
node_flag_propagate = fn.attr("node_flag_propagate")
variant_propagate = fn.attr("variant_propagate")
variant_propagation_candidate = fn.attr("variant_propagation_candidate")
class Body:
node = fn.attr("node")
@ -1936,7 +1943,7 @@ class Body:
node_flag = fn.attr("node_flag")
node_flag_source = fn.attr("node_flag_source")
node_flag_propagate = fn.attr("node_flag_propagate")
variant_propagate = fn.attr("variant_propagate")
variant_propagation_candidate = fn.attr("variant_propagation_candidate")
f = Body if body else Head
@ -1971,7 +1978,7 @@ class Body:
if not spec.concrete:
reserved_names = spack.directives.reserved_names
if not spec.virtual and vname not in reserved_names:
pkg_cls = spack.repo.PATH.get_pkg_class(spec.name)
pkg_cls = self.pkg_class(spec.name)
try:
variant_def, _ = pkg_cls.variants[vname]
except KeyError:
@ -1985,7 +1992,9 @@ class Body:
clauses.append(f.variant_value(spec.name, vname, value))
if variant.propagate:
clauses.append(f.variant_propagate(spec.name, vname, value, spec.name))
clauses.append(
f.variant_propagation_candidate(spec.name, vname, value, spec.name)
)
# Tell the concretizer that this is a possible value for the
# variant, to account for things like int/str values where we
@ -2088,7 +2097,7 @@ def define_package_versions_and_validate_preferences(
"""Declare any versions in specs not declared in packages."""
packages_yaml = spack.config.get("packages")
for pkg_name in possible_pkgs:
pkg_cls = spack.repo.PATH.get_pkg_class(pkg_name)
pkg_cls = self.pkg_class(pkg_name)
# All the versions from the corresponding package.py file. Since concepts
# like being a "develop" version or being preferred exist only at a
@ -2176,7 +2185,7 @@ def _supported_targets(self, compiler_name, compiler_version, targets):
try:
with warnings.catch_warnings():
warnings.simplefilter("ignore")
target.optimization_flags(compiler_name, compiler_version)
target.optimization_flags(compiler_name, str(compiler_version))
supported.append(target)
except archspec.cpu.UnsupportedMicroarchitecture:
continue
@ -2548,14 +2557,8 @@ def setup(
reuse: list of concrete specs that can be reused
allow_deprecated: if True adds deprecated versions into the solve
"""
self._condition_id_counter = itertools.count()
# preliminary checks
check_packages_exist(specs)
# get list of all possible dependencies
self.possible_virtuals = set(x.name for x in specs if x.virtual)
node_counter = _create_counter(specs, tests=self.tests)
self.possible_virtuals = node_counter.possible_virtuals()
self.pkgs = node_counter.possible_dependencies()
@ -2568,6 +2571,10 @@ def setup(
if missing_deps:
raise spack.spec.InvalidDependencyError(spec.name, missing_deps)
for node in spack.traverse.traverse_nodes(specs):
if node.namespace is not None:
self.explicitly_required_namespaces[node.name] = node.namespace
# driver is used by all the functions below to add facts and
# rules to generate an ASP program.
self.gen = driver
@ -2673,23 +2680,21 @@ def setup(
def literal_specs(self, specs):
for spec in specs:
self.gen.h2("Spec: %s" % str(spec))
condition_id = next(self._condition_id_counter)
trigger_id = next(self._trigger_id_counter)
condition_id = next(self._id_counter)
trigger_id = next(self._id_counter)
# Special condition triggered by "literal_solved"
self.gen.fact(fn.literal(trigger_id))
self.gen.fact(fn.pkg_fact(spec.name, fn.condition_trigger(condition_id, trigger_id)))
self.gen.fact(fn.condition_reason(condition_id, f"{spec} requested from CLI"))
self.gen.fact(fn.condition_reason(condition_id, f"{spec} requested explicitly"))
# Effect imposes the spec
imposed_spec_key = str(spec), None
cache = self._effect_cache[spec.name]
msg = (
"literal specs have different requirements. clear cache before computing literals"
)
assert imposed_spec_key not in cache, msg
effect_id = next(self._effect_id_counter)
requirements = self.spec_clauses(spec)
if imposed_spec_key in cache:
effect_id, requirements = cache[imposed_spec_key]
else:
effect_id = next(self._id_counter)
requirements = self.spec_clauses(spec)
root_name = spec.name
for clause in requirements:
clause_name = clause.args[0]
@ -2779,6 +2784,13 @@ def _specs_from_requires(self, pkg_name, section):
for s in spec_group[key]:
yield _spec_with_default_name(s, pkg_name)
def pkg_class(self, pkg_name: str) -> typing.Type["spack.package_base.PackageBase"]:
request = pkg_name
if pkg_name in self.explicitly_required_namespaces:
namespace = self.explicitly_required_namespaces[pkg_name]
request = f"{namespace}.{pkg_name}"
return spack.repo.PATH.get_pkg_class(request)
class SpecBuilder:
"""Class with actions to rebuild a spec from ASP results."""
@ -2790,9 +2802,11 @@ class SpecBuilder:
r"^.*_propagate$",
r"^.*_satisfies$",
r"^.*_set$",
r"^dependency_holds$",
r"^node_compiler$",
r"^package_hash$",
r"^root$",
r"^track_dependencies$",
r"^variant_default_value_from_cli$",
r"^virtual_node$",
r"^virtual_root$",
@ -2836,6 +2850,9 @@ def _arch(self, node):
self._specs[node].architecture = arch
return arch
def namespace(self, node, namespace):
self._specs[node].namespace = namespace
def node_platform(self, node, platform):
self._arch(node).platform = platform
@ -3050,14 +3067,6 @@ def build_specs(self, function_tuples):
action(*args)
# namespace assignment is done after the fact, as it is not
# currently part of the solve
for spec in self._specs.values():
if spec.namespace:
continue
repo = spack.repo.PATH.repo_for_pkg(spec)
spec.namespace = repo.namespace
# fix flags after all specs are constructed
self.reorder_flags()

View File

@ -45,6 +45,9 @@
:- attr("depends_on", node(min_dupe_id, Package), node(ID, _), "link"), ID != min_dupe_id, unification_set("root", node(min_dupe_id, Package)), internal_error("link dependency out of the root unification set").
:- attr("depends_on", node(min_dupe_id, Package), node(ID, _), "run"), ID != min_dupe_id, unification_set("root", node(min_dupe_id, Package)), internal_error("run dependency out of the root unification set").
% Namespaces are statically assigned by a package fact
attr("namespace", node(ID, Package), Namespace) :- attr("node", node(ID, Package)), pkg_fact(Package, namespace(Namespace)).
% Rules on "unification sets", i.e. on sets of nodes allowing a single configuration of any given package
unify(SetID, PackageName) :- unification_set(SetID, node(_, PackageName)).
:- 2 { unification_set(SetID, node(_, PackageName)) }, unify(SetID, PackageName).
@ -695,6 +698,26 @@ requirement_group_satisfied(node(ID, Package), X) :-
activate_requirement(node(ID, Package), X),
requirement_group(Package, X).
% Do not impose requirements, if the conditional requirement is not active
do_not_impose(EffectID, node(ID, Package)) :-
trigger_condition_holds(TriggerID, node(ID, Package)),
pkg_fact(Package, condition_trigger(ConditionID, TriggerID)),
pkg_fact(Package, condition_effect(ConditionID, EffectID)),
requirement_group_member(ConditionID , Package, RequirementID),
not activate_requirement(node(ID, Package), RequirementID).
% When we have a required provider, we need to ensure that the provider/2 facts respect
% the requirement. This is particularly important for packages that could provide multiple
% virtuals independently
required_provider(Provider, Virtual)
:- requirement_group_member(ConditionID, Virtual, RequirementID),
condition_holds(ConditionID, _),
virtual(Virtual),
pkg_fact(Virtual, condition_effect(ConditionID, EffectID)),
imposed_constraint(EffectID, "node", Provider).
:- provider(node(Y, Package), node(X, Virtual)), required_provider(Provider, Virtual), Package != Provider.
% TODO: the following two choice rules allow the solver to add compiler
% flags if their only source is from a requirement. This is overly-specific
% and should use a more-generic approach like in https://github.com/spack/spack/pull/37180
@ -757,23 +780,36 @@ node_has_variant(node(ID, Package), Variant) :-
pkg_fact(Package, variant(Variant)),
attr("node", node(ID, Package)).
attr("variant_propagate", PackageNode, Variant, Value, Source) :-
% Variant propagation is forwarded to dependencies
attr("variant_propagation_candidate", PackageNode, Variant, Value, Source) :-
attr("node", PackageNode),
depends_on(ParentNode, PackageNode),
attr("variant_propagate", ParentNode, Variant, Value, Source),
not attr("variant_set", PackageNode, Variant).
attr("variant_value", node(_, Source), Variant, Value),
attr("variant_propagation_candidate", ParentNode, Variant, _, Source).
attr("variant_value", node(ID, Package), Variant, Value) :-
attr("node", node(ID, Package)),
% If the node is a candidate, and it has the variant and value,
% then those variant and value should be propagated
attr("variant_propagate", node(ID, Package), Variant, Value, Source) :-
attr("variant_propagation_candidate", node(ID, Package), Variant, Value, Source),
node_has_variant(node(ID, Package), Variant),
attr("variant_propagate", node(ID, Package), Variant, Value, _),
pkg_fact(Package, variant_possible_value(Variant, Value)).
pkg_fact(Package, variant_possible_value(Variant, Value)),
not attr("variant_set", node(ID, Package), Variant).
% Propagate the value, if there is the corresponding attribute
attr("variant_value", PackageNode, Variant, Value) :- attr("variant_propagate", PackageNode, Variant, Value, _).
% If a variant is propagated, we cannot have extraneous values (this is for multi valued variants)
variant_is_propagated(PackageNode, Variant) :- attr("variant_propagate", PackageNode, Variant, _, _).
:- variant_is_propagated(PackageNode, Variant),
attr("variant_value", PackageNode, Variant, Value),
not attr("variant_propagate", PackageNode, Variant, Value, _).
% Cannot receive different values from different sources on the same variant
error(100, "{0} and {1} cannot both propagate variant '{2}' to package {3} with values '{4}' and '{5}'", Source1, Source2, Variant, Package, Value1, Value2) :-
attr("variant_propagate", node(X, Package), Variant, Value1, Source1),
attr("variant_propagate", node(X, Package), Variant, Value2, Source2),
node_has_variant(node(X, Package), Variant),
Value1 < Value2.
Value1 < Value2, Source1 < Source2.
% a variant cannot be set if it is not a variant on the package
error(100, "Cannot set variant '{0}' for package '{1}' because the variant condition cannot be satisfied for the given spec", Variant, Package)

View File

@ -10,6 +10,9 @@
%=============================================================================
% macOS
os_compatible("sequoia", "sonoma").
os_compatible("sonoma", "ventura").
os_compatible("ventura", "monterey").
os_compatible("monterey", "bigsur").
os_compatible("bigsur", "catalina").

View File

@ -213,6 +213,19 @@ def __call__(self, match):
return clr.colorize(re.sub(_SEPARATORS, insert_color(), str(spec)) + "@.")
OLD_STYLE_FMT_RE = re.compile(r"\${[A-Z]+}")
def ensure_modern_format_string(fmt: str) -> None:
"""Ensure that the format string does not contain old ${...} syntax."""
result = OLD_STYLE_FMT_RE.search(fmt)
if result:
raise SpecFormatStringError(
f"Format string `{fmt}` contains old syntax `{result.group(0)}`. "
"This is no longer supported."
)
@lang.lazy_lexicographic_ordering
class ArchSpec:
"""Aggregate the target platform, the operating system and the target microarchitecture."""
@ -4360,6 +4373,7 @@ def format(self, format_string=DEFAULT_FORMAT, **kwargs):
that accepts a string and returns another one
"""
ensure_modern_format_string(format_string)
color = kwargs.get("color", False)
transform = kwargs.get("transform", {})

View File

@ -102,7 +102,10 @@ def to_dict_or_value(self):
if self.microarchitecture.vendor == "generic":
return str(self)
return syaml.syaml_dict(self.microarchitecture.to_dict(return_list_of_items=True))
# Get rid of compiler flag information before turning the uarch into a dict
uarch_dict = self.microarchitecture.to_dict()
uarch_dict.pop("compilers", None)
return syaml.syaml_dict(uarch_dict.items())
def __repr__(self):
cls_name = self.__class__.__name__

View File

@ -8,13 +8,16 @@
import pytest
import archspec.cpu
import llnl.util.filesystem as fs
import spack.compilers
import spack.concretize
import spack.operating_systems
import spack.platforms
import spack.target
from spack.spec import ArchSpec, CompilerSpec, Spec
from spack.spec import ArchSpec, Spec
@pytest.fixture(scope="module")
@ -121,52 +124,60 @@ def test_arch_spec_container_semantic(item, architecture_str):
@pytest.mark.parametrize(
"compiler_spec,target_name,expected_flags",
[
# Check compilers with version numbers from a single toolchain
# Homogeneous compilers
("gcc@4.7.2", "ivybridge", "-march=core-avx-i -mtune=core-avx-i"),
# Check mixed toolchains
("clang@8.0.0", "broadwell", ""),
("clang@3.5", "x86_64", "-march=x86-64 -mtune=generic"),
# Check Apple's Clang compilers
("apple-clang@9.1.0", "x86_64", "-march=x86-64"),
# Mixed toolchain
("clang@8.0.0", "broadwell", ""),
],
)
@pytest.mark.filterwarnings("ignore:microarchitecture specific")
def test_optimization_flags(compiler_spec, target_name, expected_flags, config):
def test_optimization_flags(compiler_spec, target_name, expected_flags, compiler_factory):
target = spack.target.Target(target_name)
compiler = spack.compilers.compilers_for_spec(compiler_spec).pop()
compiler_dict = compiler_factory(spec=compiler_spec, operating_system="")["compiler"]
if compiler_spec == "clang@8.0.0":
compiler_dict["paths"] = {
"cc": "/path/to/clang-8",
"cxx": "/path/to/clang++-8",
"f77": "/path/to/gfortran-9",
"fc": "/path/to/gfortran-9",
}
compiler = spack.compilers.compiler_from_dict(compiler_dict)
opt_flags = target.optimization_flags(compiler)
assert opt_flags == expected_flags
@pytest.mark.parametrize(
"compiler,real_version,target_str,expected_flags",
"compiler_str,real_version,target_str,expected_flags",
[
(CompilerSpec("gcc@=9.2.0"), None, "haswell", "-march=haswell -mtune=haswell"),
("gcc@=9.2.0", None, "haswell", "-march=haswell -mtune=haswell"),
# Check that custom string versions are accepted
(
CompilerSpec("gcc@=10foo"),
"9.2.0",
"icelake",
"-march=icelake-client -mtune=icelake-client",
),
("gcc@=10foo", "9.2.0", "icelake", "-march=icelake-client -mtune=icelake-client"),
# Check that we run version detection (4.4.0 doesn't support icelake)
(
CompilerSpec("gcc@=4.4.0-special"),
"9.2.0",
"icelake",
"-march=icelake-client -mtune=icelake-client",
),
("gcc@=4.4.0-special", "9.2.0", "icelake", "-march=icelake-client -mtune=icelake-client"),
# Check that the special case for Apple's clang is treated correctly
# i.e. it won't try to detect the version again
(CompilerSpec("apple-clang@=9.1.0"), None, "x86_64", "-march=x86-64"),
("apple-clang@=9.1.0", None, "x86_64", "-march=x86-64"),
],
)
def test_optimization_flags_with_custom_versions(
compiler, real_version, target_str, expected_flags, monkeypatch, config
compiler_str,
real_version,
target_str,
expected_flags,
monkeypatch,
mutable_config,
compiler_factory,
):
target = spack.target.Target(target_str)
compiler_dict = compiler_factory(spec=compiler_str, operating_system="redhat6")
mutable_config.set("compilers", [compiler_dict])
if real_version:
monkeypatch.setattr(spack.compiler.Compiler, "get_real_version", lambda x: real_version)
compiler = spack.compilers.compiler_from_dict(compiler_dict["compiler"])
opt_flags = target.optimization_flags(compiler)
assert opt_flags == expected_flags
@ -201,13 +212,16 @@ def test_satisfy_strict_constraint_when_not_concrete(architecture_tuple, constra
)
@pytest.mark.usefixtures("mock_packages", "config")
@pytest.mark.only_clingo("Fixing the parser broke this test for the original concretizer.")
@pytest.mark.skipif(
str(archspec.cpu.host().family) != "x86_64", reason="tests are for x86_64 uarch ranges"
)
def test_concretize_target_ranges(root_target_range, dep_target_range, result, monkeypatch):
# Monkeypatch so that all concretization is done as if the machine is core2
monkeypatch.setattr(spack.platforms.test.Test, "default", "core2")
spec = Spec(f"a %gcc@10 foobar=bar target={root_target_range} ^b target={dep_target_range}")
spec = Spec(
f"pkg-a %gcc@10 foobar=bar target={root_target_range} ^pkg-b target={dep_target_range}"
)
with spack.concretize.disable_compiler_existence_check():
spec.concretize()
assert spec.target == spec["b"].target == result
assert spec.target == spec["pkg-b"].target == result
@pytest.mark.parametrize(

View File

@ -4,7 +4,9 @@
# SPDX-License-Identifier: (Apache-2.0 OR MIT)
import filecmp
import glob
import gzip
import io
import json
import os
import platform
import sys
@ -17,6 +19,8 @@
import py
import pytest
import archspec.cpu
from llnl.util.filesystem import join_path, visit_directory_tree
import spack.binary_distribution as bindist
@ -199,6 +203,9 @@ def dummy_prefix(tmpdir):
with open(data, "w") as f:
f.write("hello world")
with open(p.join(".spack", "binary_distribution"), "w") as f:
f.write("{}")
os.symlink("app", relative_app_link)
os.symlink(app, absolute_app_link)
@ -568,11 +575,20 @@ def test_update_sbang(tmpdir, test_mirror):
uninstall_cmd("-y", "/%s" % new_spec.dag_hash())
def test_install_legacy_buildcache_layout(install_mockery_mutable_config):
@pytest.mark.skipif(
str(archspec.cpu.host().family) != "x86_64",
reason="test data uses gcc 4.5.0 which does not support aarch64",
)
def test_install_legacy_buildcache_layout(
mutable_config, compiler_factory, install_mockery_mutable_config
):
"""Legacy buildcache layout involved a nested archive structure
where the .spack file contained a repeated spec.json and another
compressed archive file containing the install tree. This test
makes sure we can still read that layout."""
mutable_config.set(
"compilers", [compiler_factory(spec="gcc@4.5.0", operating_system="debian6")]
)
legacy_layout_dir = os.path.join(test_path, "data", "mirrors", "legacy_layout")
mirror_url = "file://{0}".format(legacy_layout_dir)
filename = (
@ -1022,7 +1038,9 @@ def test_tarball_common_prefix(dummy_prefix, tmpdir):
bindist._tar_strip_component(tar, common_prefix)
# Extract into prefix2
tar.extractall(path="prefix2")
tar.extractall(
path="prefix2", members=bindist._tar_strip_component(tar, common_prefix)
)
# Verify files are all there at the correct level.
assert set(os.listdir("prefix2")) == {"bin", "share", ".spack"}
@ -1042,13 +1060,30 @@ def test_tarball_common_prefix(dummy_prefix, tmpdir):
)
def test_tarfile_missing_binary_distribution_file(tmpdir):
"""A tarfile that does not contain a .spack/binary_distribution file cannot be
used to install."""
with tmpdir.as_cwd():
# An empty .spack dir.
with tarfile.open("empty.tar", mode="w") as tar:
tarinfo = tarfile.TarInfo(name="example/.spack")
tarinfo.type = tarfile.DIRTYPE
tar.addfile(tarinfo)
with pytest.raises(ValueError, match="missing binary_distribution file"):
bindist._ensure_common_prefix(tarfile.open("empty.tar", mode="r"))
def test_tarfile_without_common_directory_prefix_fails(tmpdir):
"""A tarfile that only contains files without a common package directory
should fail to extract, as we won't know where to put the files."""
with tmpdir.as_cwd():
# Create a broken tarball with just a file, no directories.
with tarfile.open("empty.tar", mode="w") as tar:
tar.addfile(tarfile.TarInfo(name="example/file"), fileobj=io.BytesIO(b"hello"))
tar.addfile(
tarfile.TarInfo(name="example/.spack/binary_distribution"),
fileobj=io.BytesIO(b"hello"),
)
with pytest.raises(ValueError, match="Tarball does not contain a common prefix"):
bindist._ensure_common_prefix(tarfile.open("empty.tar", mode="r"))
@ -1112,3 +1147,77 @@ def test_tarfile_of_spec_prefix(tmpdir):
assert tar.getmember(f"{expected_prefix}/b_directory/file").isreg()
assert tar.getmember(f"{expected_prefix}/c_directory").isdir()
assert tar.getmember(f"{expected_prefix}/c_directory/file").isreg()
@pytest.mark.parametrize("layout,expect_success", [(None, True), (1, True), (2, False)])
def test_get_valid_spec_file(tmp_path, layout, expect_success):
# Test reading a spec.json file that does not specify a layout version.
spec_dict = Spec("example").to_dict()
path = tmp_path / "spec.json"
effective_layout = layout or 0 # If not specified it should be 0
# Add a layout version
if layout is not None:
spec_dict["buildcache_layout_version"] = layout
# Save to file
with open(path, "w") as f:
json.dump(spec_dict, f)
try:
spec_dict_disk, layout_disk = bindist._get_valid_spec_file(
str(path), max_supported_layout=1
)
assert expect_success
assert spec_dict_disk == spec_dict
assert layout_disk == effective_layout
except bindist.InvalidMetadataFile:
assert not expect_success
def test_get_valid_spec_file_doesnt_exist(tmp_path):
with pytest.raises(bindist.InvalidMetadataFile, match="No such file"):
bindist._get_valid_spec_file(str(tmp_path / "no-such-file"), max_supported_layout=1)
def test_get_valid_spec_file_gzipped(tmp_path):
# Create a gzipped file, contents don't matter
path = tmp_path / "spec.json.gz"
with gzip.open(path, "wb") as f:
f.write(b"hello")
with pytest.raises(
bindist.InvalidMetadataFile, match="Compressed spec files are not supported"
):
bindist._get_valid_spec_file(str(path), max_supported_layout=1)
@pytest.mark.parametrize("filename", ["spec.json", "spec.json.sig"])
def test_get_valid_spec_file_no_json(tmp_path, filename):
tmp_path.joinpath(filename).write_text("not json")
with pytest.raises(bindist.InvalidMetadataFile):
bindist._get_valid_spec_file(str(tmp_path / filename), max_supported_layout=1)
def test_download_tarball_with_unsupported_layout_fails(tmp_path, mutable_config, capsys):
layout_version = bindist.FORWARD_COMPAT_BUILD_CACHE_LAYOUT_VERSION + 1
spec = Spec("gmake@4.4.1%gcc@13.1.0 arch=linux-ubuntu23.04-zen2")
spec._mark_concrete()
spec_dict = spec.to_dict()
spec_dict["buildcache_layout_version"] = layout_version
# Setup a basic local build cache structure
path = (
tmp_path / bindist.build_cache_relative_path() / bindist.tarball_name(spec, ".spec.json")
)
path.parent.mkdir(parents=True)
with open(path, "w") as f:
json.dump(spec_dict, f)
# Configure as a mirror.
mirror_cmd("add", "test-mirror", str(tmp_path))
# Shouldn't be able "download" this.
assert bindist.download_tarball(spec, unsigned=True) is None
# And there should be a warning about an unsupported layout version.
assert f"Layout version {layout_version} is too new" in capsys.readouterr().err

View File

@ -437,14 +437,14 @@ def test_parallel_false_is_not_propagating(default_mock_concretization):
# a foobar=bar (parallel = False)
# |
# b (parallel =True)
s = default_mock_concretization("a foobar=bar")
s = default_mock_concretization("pkg-a foobar=bar")
spack.build_environment.set_package_py_globals(s.package)
assert s["a"].package.module.make_jobs == 1
assert s["pkg-a"].package.module.make_jobs == 1
spack.build_environment.set_package_py_globals(s["b"].package)
assert s["b"].package.module.make_jobs == spack.build_environment.determine_number_of_jobs(
parallel=s["b"].package.parallel
spack.build_environment.set_package_py_globals(s["pkg-b"].package)
assert s["pkg-b"].package.module.make_jobs == spack.build_environment.determine_number_of_jobs(
parallel=s["pkg-b"].package.parallel
)
@ -540,7 +540,7 @@ def test_dirty_disable_module_unload(config, mock_packages, working_env, mock_mo
"""Test that on CRAY platform 'module unload' is not called if the 'dirty'
option is on.
"""
s = spack.spec.Spec("a").concretized()
s = spack.spec.Spec("pkg-a").concretized()
# If called with "dirty" we don't unload modules, so no calls to the
# `module` function on Cray

View File

@ -9,6 +9,8 @@
import py.path
import pytest
import archspec.cpu
import llnl.util.filesystem as fs
import spack.build_systems.autotools
@ -95,7 +97,7 @@ def test_negative_ninja_check(self, input_dir, test_dir, concretize_and_setup):
@pytest.mark.usefixtures("config", "mock_packages")
class TestAutotoolsPackage:
def test_with_or_without(self, default_mock_concretization):
s = default_mock_concretization("a")
s = default_mock_concretization("pkg-a")
options = s.package.with_or_without("foo")
# Ensure that values that are not representing a feature
@ -127,7 +129,7 @@ def activate(value):
assert "--without-lorem-ipsum" in options
def test_none_is_allowed(self, default_mock_concretization):
s = default_mock_concretization("a foo=none")
s = default_mock_concretization("pkg-a foo=none")
options = s.package.with_or_without("foo")
# Ensure that values that are not representing a feature
@ -209,6 +211,9 @@ def test_autotools_gnuconfig_replacement_disabled(
assert "gnuconfig version of config.guess" not in f.read()
@pytest.mark.disable_clean_stage_check
@pytest.mark.skipif(
str(archspec.cpu.host().family) != "x86_64", reason="test data is specific for x86_64"
)
def test_autotools_gnuconfig_replacement_no_gnuconfig(self, mutable_database, monkeypatch):
"""
Tests whether a useful error message is shown when patch_config_files is

View File

@ -25,7 +25,7 @@ def test_error_when_multiple_specs_are_given():
assert "only takes one spec" in output
@pytest.mark.parametrize("args", [("--", "/bin/bash", "-c", "echo test"), ("--",), ()])
@pytest.mark.parametrize("args", [("--", "/bin/sh", "-c", "echo test"), ("--",), ()])
@pytest.mark.usefixtures("config", "mock_packages", "working_env")
def test_build_env_requires_a_spec(args):
output = build_env(*args, fail_on_error=False)
@ -35,7 +35,7 @@ def test_build_env_requires_a_spec(args):
_out_file = "env.out"
@pytest.mark.parametrize("shell", ["pwsh", "bat"] if sys.platform == "win32" else ["bash"])
@pytest.mark.parametrize("shell", ["pwsh", "bat"] if sys.platform == "win32" else ["sh"])
@pytest.mark.usefixtures("config", "mock_packages", "working_env")
def test_dump(shell_as, shell, tmpdir):
with tmpdir.as_cwd():

View File

@ -102,24 +102,24 @@ def test_specs_staging(config, tmpdir):
"""
builder = repo.MockRepositoryBuilder(tmpdir)
builder.add_package("g")
builder.add_package("f")
builder.add_package("e")
builder.add_package("d", dependencies=[("f", None, None), ("g", None, None)])
builder.add_package("c")
builder.add_package("b", dependencies=[("d", None, None), ("e", None, None)])
builder.add_package("a", dependencies=[("b", None, None), ("c", None, None)])
builder.add_package("pkg-g")
builder.add_package("pkg-f")
builder.add_package("pkg-e")
builder.add_package("pkg-d", dependencies=[("pkg-f", None, None), ("pkg-g", None, None)])
builder.add_package("pkg-c")
builder.add_package("pkg-b", dependencies=[("pkg-d", None, None), ("pkg-e", None, None)])
builder.add_package("pkg-a", dependencies=[("pkg-b", None, None), ("pkg-c", None, None)])
with repo.use_repositories(builder.root):
spec_a = Spec("a").concretized()
spec_a = Spec("pkg-a").concretized()
spec_a_label = ci._spec_deps_key(spec_a)
spec_b_label = ci._spec_deps_key(spec_a["b"])
spec_c_label = ci._spec_deps_key(spec_a["c"])
spec_d_label = ci._spec_deps_key(spec_a["d"])
spec_e_label = ci._spec_deps_key(spec_a["e"])
spec_f_label = ci._spec_deps_key(spec_a["f"])
spec_g_label = ci._spec_deps_key(spec_a["g"])
spec_b_label = ci._spec_deps_key(spec_a["pkg-b"])
spec_c_label = ci._spec_deps_key(spec_a["pkg-c"])
spec_d_label = ci._spec_deps_key(spec_a["pkg-d"])
spec_e_label = ci._spec_deps_key(spec_a["pkg-e"])
spec_f_label = ci._spec_deps_key(spec_a["pkg-f"])
spec_g_label = ci._spec_deps_key(spec_a["pkg-g"])
spec_labels, dependencies, stages = ci.stage_spec_jobs([spec_a])
@ -1256,7 +1256,7 @@ def test_ci_generate_override_runner_attrs(
spack:
specs:
- flatten-deps
- a
- pkg-a
mirrors:
some-mirror: https://my.fake.mirror
ci:
@ -1273,12 +1273,12 @@ def test_ci_generate_override_runner_attrs(
- match:
- dependency-install
- match:
- a
- pkg-a
build-job:
tags:
- specific-a-2
- match:
- a
- pkg-a
build-job-remove:
tags:
- toplevel2
@ -1338,8 +1338,8 @@ def test_ci_generate_override_runner_attrs(
assert global_vars["SPACK_CHECKOUT_VERSION"] == git_version or "v0.20.0.test0"
for ci_key in yaml_contents.keys():
if ci_key.startswith("a"):
# Make sure a's attributes override variables, and all the
if ci_key.startswith("pkg-a"):
# Make sure pkg-a's attributes override variables, and all the
# scripts. Also, make sure the 'toplevel' tag doesn't
# appear twice, but that a's specific extra tag does appear
the_elt = yaml_contents[ci_key]
@ -1798,7 +1798,7 @@ def test_ci_generate_read_broken_specs_url(
tmpdir, mutable_mock_env_path, install_mockery, mock_packages, monkeypatch, ci_base_environment
):
"""Verify that `broken-specs-url` works as intended"""
spec_a = Spec("a")
spec_a = Spec("pkg-a")
spec_a.concretize()
a_dag_hash = spec_a.dag_hash()
@ -1824,7 +1824,7 @@ def test_ci_generate_read_broken_specs_url(
spack:
specs:
- flatten-deps
- a
- pkg-a
mirrors:
some-mirror: https://my.fake.mirror
ci:
@ -1832,9 +1832,9 @@ def test_ci_generate_read_broken_specs_url(
pipeline-gen:
- submapping:
- match:
- a
- pkg-a
- flatten-deps
- b
- pkg-b
- dependency-install
build-job:
tags:
@ -2000,7 +2000,7 @@ def test_ci_reproduce(
install_script = os.path.join(working_dir.strpath, "install.sh")
with open(install_script, "w") as fd:
fd.write("#!/bin/bash\n\n#fake install\nspack install blah\n")
fd.write("#!/bin/sh\n\n#fake install\nspack install blah\n")
spack_info_file = os.path.join(working_dir.strpath, "spack_info.txt")
with open(spack_info_file, "w") as fd:

View File

@ -81,14 +81,14 @@ def test_match_spec_env(mock_packages, mutable_mock_env_path):
"""
# Initial sanity check: we are planning on choosing a non-default
# value, so make sure that is in fact not the default.
check_defaults = spack.cmd.parse_specs(["a"], concretize=True)[0]
check_defaults = spack.cmd.parse_specs(["pkg-a"], concretize=True)[0]
assert not check_defaults.satisfies("foobar=baz")
e = ev.create("test")
e.add("a foobar=baz")
e.add("pkg-a foobar=baz")
e.concretize()
with e:
env_spec = spack.cmd.matching_spec_from_env(spack.cmd.parse_specs(["a"])[0])
env_spec = spack.cmd.matching_spec_from_env(spack.cmd.parse_specs(["pkg-a"])[0])
assert env_spec.satisfies("foobar=baz")
assert env_spec.concrete
@ -96,12 +96,12 @@ def test_match_spec_env(mock_packages, mutable_mock_env_path):
@pytest.mark.usefixtures("config")
def test_multiple_env_match_raises_error(mock_packages, mutable_mock_env_path):
e = ev.create("test")
e.add("a foobar=baz")
e.add("a foobar=fee")
e.add("pkg-a foobar=baz")
e.add("pkg-a foobar=fee")
e.concretize()
with e:
with pytest.raises(ev.SpackEnvironmentError) as exc_info:
spack.cmd.matching_spec_from_env(spack.cmd.parse_specs(["a"])[0])
spack.cmd.matching_spec_from_env(spack.cmd.parse_specs(["pkg-a"])[0])
assert "matches multiple specs" in exc_info.value.message
@ -109,16 +109,16 @@ def test_multiple_env_match_raises_error(mock_packages, mutable_mock_env_path):
@pytest.mark.usefixtures("config")
def test_root_and_dep_match_returns_root(mock_packages, mutable_mock_env_path):
e = ev.create("test")
e.add("b@0.9")
e.add("a foobar=bar") # Depends on b, should choose b@1.0
e.add("pkg-b@0.9")
e.add("pkg-a foobar=bar") # Depends on b, should choose b@1.0
e.concretize()
with e:
# This query matches the root b and b as a dependency of a. In that
# case the root instance should be preferred.
env_spec1 = spack.cmd.matching_spec_from_env(spack.cmd.parse_specs(["b"])[0])
env_spec1 = spack.cmd.matching_spec_from_env(spack.cmd.parse_specs(["pkg-b"])[0])
assert env_spec1.satisfies("@0.9")
env_spec2 = spack.cmd.matching_spec_from_env(spack.cmd.parse_specs(["b@1.0"])[0])
env_spec2 = spack.cmd.matching_spec_from_env(spack.cmd.parse_specs(["pkg-b@1.0"])[0])
assert env_spec2

View File

@ -111,10 +111,10 @@ def test_compiler_find_no_apple_gcc(no_compilers_yaml, working_env, mock_executa
@pytest.mark.regression("37996")
def test_compiler_remove(mutable_config, mock_packages):
"""Tests that we can remove a compiler from configuration."""
assert spack.spec.CompilerSpec("gcc@=4.5.0") in spack.compilers.all_compiler_specs()
args = spack.util.pattern.Bunch(all=True, compiler_spec="gcc@4.5.0", add_paths=[], scope=None)
assert spack.spec.CompilerSpec("gcc@=4.8.0") in spack.compilers.all_compiler_specs()
args = spack.util.pattern.Bunch(all=True, compiler_spec="gcc@4.8.0", add_paths=[], scope=None)
spack.cmd.compiler.compiler_remove(args)
assert spack.spec.CompilerSpec("gcc@=4.5.0") not in spack.compilers.all_compiler_specs()
assert spack.spec.CompilerSpec("gcc@=4.8.0") not in spack.compilers.all_compiler_specs()
@pytest.mark.regression("37996")
@ -123,10 +123,10 @@ def test_removing_compilers_from_multiple_scopes(mutable_config, mock_packages):
site_config = spack.config.get("compilers", scope="site")
spack.config.set("compilers", site_config, scope="user")
assert spack.spec.CompilerSpec("gcc@=4.5.0") in spack.compilers.all_compiler_specs()
args = spack.util.pattern.Bunch(all=True, compiler_spec="gcc@4.5.0", add_paths=[], scope=None)
assert spack.spec.CompilerSpec("gcc@=4.8.0") in spack.compilers.all_compiler_specs()
args = spack.util.pattern.Bunch(all=True, compiler_spec="gcc@4.8.0", add_paths=[], scope=None)
spack.cmd.compiler.compiler_remove(args)
assert spack.spec.CompilerSpec("gcc@=4.5.0") not in spack.compilers.all_compiler_specs()
assert spack.spec.CompilerSpec("gcc@=4.8.0") not in spack.compilers.all_compiler_specs()
@pytest.mark.not_on_windows("Cannot execute bash script on Windows")

View File

@ -51,8 +51,8 @@ def test_concretize_root_test_dependencies_are_concretized(unify, mutable_mock_e
with ev.read("test") as e:
e.unify = unify
add("a")
add("b")
add("pkg-a")
add("pkg-b")
concretize("--test", "root")
assert e.matching_spec("test-dependency")

View File

@ -0,0 +1,78 @@
# Copyright 2013-2023 Lawrence Livermore National Security, LLC and other
# Spack Project Developers. See the top-level COPYRIGHT file for details.
#
# SPDX-License-Identifier: (Apache-2.0 OR MIT)
import pytest
import spack.environment as ev
from spack.main import SpackCommand, SpackCommandError
deconcretize = SpackCommand("deconcretize")
@pytest.fixture(scope="function")
def test_env(mutable_mock_env_path, config, mock_packages):
ev.create("test")
with ev.read("test") as e:
e.add("pkg-a@2.0 foobar=bar ^pkg-b@1.0")
e.add("pkg-a@1.0 foobar=bar ^pkg-b@0.9")
e.concretize()
e.write()
def test_deconcretize_dep(test_env):
with ev.read("test") as e:
deconcretize("-y", "pkg-b@1.0")
specs = [s for s, _ in e.concretized_specs()]
assert len(specs) == 1
assert specs[0].satisfies("pkg-a@1.0")
def test_deconcretize_all_dep(test_env):
with ev.read("test") as e:
with pytest.raises(SpackCommandError):
deconcretize("-y", "pkg-b")
deconcretize("-y", "--all", "pkg-b")
specs = [s for s, _ in e.concretized_specs()]
assert len(specs) == 0
def test_deconcretize_root(test_env):
with ev.read("test") as e:
output = deconcretize("-y", "--root", "pkg-b@1.0")
assert "No matching specs to deconcretize" in output
assert len(e.concretized_order) == 2
deconcretize("-y", "--root", "pkg-a@2.0")
specs = [s for s, _ in e.concretized_specs()]
assert len(specs) == 1
assert specs[0].satisfies("pkg-a@1.0")
def test_deconcretize_all_root(test_env):
with ev.read("test") as e:
with pytest.raises(SpackCommandError):
deconcretize("-y", "--root", "pkg-a")
output = deconcretize("-y", "--root", "--all", "pkg-b")
assert "No matching specs to deconcretize" in output
assert len(e.concretized_order) == 2
deconcretize("-y", "--root", "--all", "pkg-a")
specs = [s for s, _ in e.concretized_specs()]
assert len(specs) == 0
def test_deconcretize_all(test_env):
with ev.read("test") as e:
with pytest.raises(SpackCommandError):
deconcretize()
deconcretize("-y", "--all")
specs = [s for s, _ in e.concretized_specs()]
assert len(specs) == 0

View File

@ -27,7 +27,9 @@
import spack.package_base
import spack.paths
import spack.repo
import spack.store
import spack.util.spack_json as sjson
import spack.util.spack_yaml
from spack.cmd.env import _env_create
from spack.main import SpackCommand, SpackCommandError
from spack.spec import Spec
@ -284,7 +286,7 @@ def setup_error(pkg, env):
_, err = capfd.readouterr()
assert "cmake-client had issues!" in err
assert "Warning: couldn't load runtime environment" in err
assert "Warning: could not load runtime environment" in err
def test_activate_adds_transitive_run_deps_to_path(install_mockery, mock_fetch, monkeypatch):
@ -346,7 +348,7 @@ def test_env_install_two_specs_same_dep(install_mockery, mock_fetch, tmpdir, cap
"""\
spack:
specs:
- a
- pkg-a
- depb
"""
)
@ -365,8 +367,8 @@ def test_env_install_two_specs_same_dep(install_mockery, mock_fetch, tmpdir, cap
depb = spack.store.STORE.db.query_one("depb", installed=True)
assert depb, "Expected depb to be installed"
a = spack.store.STORE.db.query_one("a", installed=True)
assert a, "Expected a to be installed"
a = spack.store.STORE.db.query_one("pkg-a", installed=True)
assert a, "Expected pkg-a to be installed"
def test_remove_after_concretize():
@ -502,12 +504,12 @@ def test_env_activate_broken_view(
# test that Spack detects the missing package and fails gracefully
with spack.repo.use_repositories(mock_custom_repository):
wrong_repo = env("activate", "--sh", "test")
assert "Warning: couldn't load runtime environment" in wrong_repo
assert "Warning: could not load runtime environment" in wrong_repo
assert "Unknown namespace: builtin.mock" in wrong_repo
# test replacing repo fixes it
normal_repo = env("activate", "--sh", "test")
assert "Warning: couldn't load runtime environment" not in normal_repo
assert "Warning: could not load runtime environment" not in normal_repo
assert "Unknown namespace: builtin.mock" not in normal_repo
@ -635,7 +637,7 @@ def test_env_view_external_prefix(tmp_path, mutable_database, mock_packages):
"""\
spack:
specs:
- a
- pkg-a
view: true
"""
)
@ -643,9 +645,9 @@ def test_env_view_external_prefix(tmp_path, mutable_database, mock_packages):
external_config = io.StringIO(
"""\
packages:
a:
pkg-a:
externals:
- spec: a@2.0
- spec: pkg-a@2.0
prefix: {a_prefix}
buildable: false
""".format(
@ -3538,7 +3540,7 @@ def test_environment_created_in_users_location(mutable_mock_env_path, tmp_path):
assert os.path.isdir(os.path.join(env_dir, dir_name))
def test_environment_created_from_lockfile_has_view(mock_packages, tmpdir):
def test_environment_created_from_lockfile_has_view(mock_packages, temporary_store, tmpdir):
"""When an env is created from a lockfile, a view should be generated for it"""
env_a = str(tmpdir.join("a"))
env_b = str(tmpdir.join("b"))

View File

@ -248,6 +248,7 @@ def _determine_variants(cls, exes, version_str):
assert gcc.external_path == os.path.sep + os.path.join("opt", "gcc", "bin")
@pytest.mark.not_on_windows("Fails spuriously on Windows")
def test_new_entries_are_reported_correctly(mock_executable, mutable_config, monkeypatch):
# Prepare an environment to detect a fake gcc
gcc_exe = mock_executable("gcc", output="echo 4.2.1")

View File

@ -43,7 +43,7 @@ def test_find_gpg(cmd_name, version, tmpdir, mock_gnupghome, monkeypatch):
f.write(TEMPLATE.format(version=version))
fs.set_executable(fname)
monkeypatch.setitem(os.environ, "PATH", str(tmpdir))
monkeypatch.setenv("PATH", str(tmpdir))
if version == "undetectable" or version.endswith("1.3.4"):
with pytest.raises(spack.util.gpg.SpackGPGError):
spack.util.gpg.init(force=True)
@ -54,7 +54,7 @@ def test_find_gpg(cmd_name, version, tmpdir, mock_gnupghome, monkeypatch):
def test_no_gpg_in_path(tmpdir, mock_gnupghome, monkeypatch, mutable_config):
monkeypatch.setitem(os.environ, "PATH", str(tmpdir))
monkeypatch.setenv("PATH", str(tmpdir))
bootstrap("disable")
with pytest.raises(RuntimeError):
spack.util.gpg.init(force=True)

View File

@ -25,7 +25,7 @@ def parser():
def print_buffer(monkeypatch):
buffer = []
def _print(*args):
def _print(*args, **kwargs):
buffer.extend(args)
monkeypatch.setattr(spack.cmd.info.color, "cprint", _print, raising=False)

View File

@ -88,7 +88,7 @@ def check(pkg):
assert pkg.run_tests
monkeypatch.setattr(spack.package_base.PackageBase, "unit_test_check", check)
install("--test=all", "a")
install("--test=all", "pkg-a")
def test_install_package_already_installed(
@ -570,61 +570,58 @@ def test_cdash_upload_build_error(tmpdir, mock_fetch, install_mockery, capfd):
@pytest.mark.disable_clean_stage_check
def test_cdash_upload_clean_build(tmpdir, mock_fetch, install_mockery, capfd):
# capfd interferes with Spack's capturing of e.g., Build.xml output
with capfd.disabled():
with tmpdir.as_cwd():
install("--log-file=cdash_reports", "--log-format=cdash", "a")
report_dir = tmpdir.join("cdash_reports")
assert report_dir in tmpdir.listdir()
report_file = report_dir.join("a_Build.xml")
assert report_file in report_dir.listdir()
content = report_file.open().read()
assert "</Build>" in content
assert "<Text>" not in content
with capfd.disabled(), tmpdir.as_cwd():
install("--log-file=cdash_reports", "--log-format=cdash", "pkg-a")
report_dir = tmpdir.join("cdash_reports")
assert report_dir in tmpdir.listdir()
report_file = report_dir.join("pkg-a_Build.xml")
assert report_file in report_dir.listdir()
content = report_file.open().read()
assert "</Build>" in content
assert "<Text>" not in content
@pytest.mark.disable_clean_stage_check
def test_cdash_upload_extra_params(tmpdir, mock_fetch, install_mockery, capfd):
# capfd interferes with Spack's capture of e.g., Build.xml output
with capfd.disabled():
with tmpdir.as_cwd():
install(
"--log-file=cdash_reports",
"--log-format=cdash",
"--cdash-build=my_custom_build",
"--cdash-site=my_custom_site",
"--cdash-track=my_custom_track",
"a",
)
report_dir = tmpdir.join("cdash_reports")
assert report_dir in tmpdir.listdir()
report_file = report_dir.join("a_Build.xml")
assert report_file in report_dir.listdir()
content = report_file.open().read()
assert 'Site BuildName="my_custom_build - a"' in content
assert 'Name="my_custom_site"' in content
assert "-my_custom_track" in content
with capfd.disabled(), tmpdir.as_cwd():
install(
"--log-file=cdash_reports",
"--log-format=cdash",
"--cdash-build=my_custom_build",
"--cdash-site=my_custom_site",
"--cdash-track=my_custom_track",
"pkg-a",
)
report_dir = tmpdir.join("cdash_reports")
assert report_dir in tmpdir.listdir()
report_file = report_dir.join("pkg-a_Build.xml")
assert report_file in report_dir.listdir()
content = report_file.open().read()
assert 'Site BuildName="my_custom_build - pkg-a"' in content
assert 'Name="my_custom_site"' in content
assert "-my_custom_track" in content
@pytest.mark.disable_clean_stage_check
def test_cdash_buildstamp_param(tmpdir, mock_fetch, install_mockery, capfd):
# capfd interferes with Spack's capture of e.g., Build.xml output
with capfd.disabled():
with tmpdir.as_cwd():
cdash_track = "some_mocked_track"
buildstamp_format = "%Y%m%d-%H%M-{0}".format(cdash_track)
buildstamp = time.strftime(buildstamp_format, time.localtime(int(time.time())))
install(
"--log-file=cdash_reports",
"--log-format=cdash",
"--cdash-buildstamp={0}".format(buildstamp),
"a",
)
report_dir = tmpdir.join("cdash_reports")
assert report_dir in tmpdir.listdir()
report_file = report_dir.join("a_Build.xml")
assert report_file in report_dir.listdir()
content = report_file.open().read()
assert buildstamp in content
with capfd.disabled(), tmpdir.as_cwd():
cdash_track = "some_mocked_track"
buildstamp_format = "%Y%m%d-%H%M-{0}".format(cdash_track)
buildstamp = time.strftime(buildstamp_format, time.localtime(int(time.time())))
install(
"--log-file=cdash_reports",
"--log-format=cdash",
"--cdash-buildstamp={0}".format(buildstamp),
"pkg-a",
)
report_dir = tmpdir.join("cdash_reports")
assert report_dir in tmpdir.listdir()
report_file = report_dir.join("pkg-a_Build.xml")
assert report_file in report_dir.listdir()
content = report_file.open().read()
assert buildstamp in content
@pytest.mark.disable_clean_stage_check
@ -632,38 +629,37 @@ def test_cdash_install_from_spec_json(
tmpdir, mock_fetch, install_mockery, capfd, mock_packages, mock_archive, config
):
# capfd interferes with Spack's capturing
with capfd.disabled():
with tmpdir.as_cwd():
spec_json_path = str(tmpdir.join("spec.json"))
with capfd.disabled(), tmpdir.as_cwd():
spec_json_path = str(tmpdir.join("spec.json"))
pkg_spec = Spec("a")
pkg_spec.concretize()
pkg_spec = Spec("pkg-a")
pkg_spec.concretize()
with open(spec_json_path, "w") as fd:
fd.write(pkg_spec.to_json(hash=ht.dag_hash))
with open(spec_json_path, "w") as fd:
fd.write(pkg_spec.to_json(hash=ht.dag_hash))
install(
"--log-format=cdash",
"--log-file=cdash_reports",
"--cdash-build=my_custom_build",
"--cdash-site=my_custom_site",
"--cdash-track=my_custom_track",
"-f",
spec_json_path,
)
install(
"--log-format=cdash",
"--log-file=cdash_reports",
"--cdash-build=my_custom_build",
"--cdash-site=my_custom_site",
"--cdash-track=my_custom_track",
"-f",
spec_json_path,
)
report_dir = tmpdir.join("cdash_reports")
assert report_dir in tmpdir.listdir()
report_file = report_dir.join("a_Configure.xml")
assert report_file in report_dir.listdir()
content = report_file.open().read()
install_command_regex = re.compile(
r"<ConfigureCommand>(.+)</ConfigureCommand>", re.MULTILINE | re.DOTALL
)
m = install_command_regex.search(content)
assert m
install_command = m.group(1)
assert "a@" in install_command
report_dir = tmpdir.join("cdash_reports")
assert report_dir in tmpdir.listdir()
report_file = report_dir.join("pkg-a_Configure.xml")
assert report_file in report_dir.listdir()
content = report_file.open().read()
install_command_regex = re.compile(
r"<ConfigureCommand>(.+)</ConfigureCommand>", re.MULTILINE | re.DOTALL
)
m = install_command_regex.search(content)
assert m
install_command = m.group(1)
assert "pkg-a@" in install_command
@pytest.mark.disable_clean_stage_check
@ -795,15 +791,15 @@ def test_install_no_add_in_env(tmpdir, mock_fetch, install_mockery, mutable_mock
# ^libdwarf
# ^mpich
# libelf@0.8.10
# a~bvv
# ^b
# a
# ^b
# pkg-a~bvv
# ^pkg-b
# pkg-a
# ^pkg-b
e = ev.create("test", with_view=False)
e.add("mpileaks")
e.add("libelf@0.8.10") # so env has both root and dep libelf specs
e.add("a")
e.add("a ~bvv")
e.add("pkg-a")
e.add("pkg-a ~bvv")
e.concretize()
e.write()
env_specs = e.all_specs()
@ -814,9 +810,9 @@ def test_install_no_add_in_env(tmpdir, mock_fetch, install_mockery, mutable_mock
# First find and remember some target concrete specs in the environment
for e_spec in env_specs:
if e_spec.satisfies(Spec("a ~bvv")):
if e_spec.satisfies(Spec("pkg-a ~bvv")):
a_spec = e_spec
elif e_spec.name == "b":
elif e_spec.name == "pkg-b":
b_spec = e_spec
elif e_spec.satisfies(Spec("mpi")):
mpi_spec = e_spec
@ -839,8 +835,8 @@ def test_install_no_add_in_env(tmpdir, mock_fetch, install_mockery, mutable_mock
assert "You can add specs to the environment with 'spack add " in inst_out
# Without --add, ensure that two packages "a" get installed
inst_out = install("a", output=str)
assert len([x for x in e.all_specs() if x.installed and x.name == "a"]) == 2
inst_out = install("pkg-a", output=str)
assert len([x for x in e.all_specs() if x.installed and x.name == "pkg-a"]) == 2
# Install an unambiguous dependency spec (that already exists as a dep
# in the environment) and make sure it gets installed (w/ deps),
@ -873,7 +869,7 @@ def test_install_no_add_in_env(tmpdir, mock_fetch, install_mockery, mutable_mock
# root of the environment as well as installed.
assert b_spec not in e.roots()
install("--add", "b")
install("--add", "pkg-b")
assert b_spec in e.roots()
assert b_spec not in e.uninstalled_specs()
@ -904,39 +900,37 @@ def test_install_help_cdash():
@pytest.mark.disable_clean_stage_check
def test_cdash_auth_token(tmpdir, mock_fetch, install_mockery, capfd):
def test_cdash_auth_token(tmpdir, mock_fetch, install_mockery, monkeypatch, capfd):
# capfd interferes with Spack's capturing
with tmpdir.as_cwd():
with capfd.disabled():
os.environ["SPACK_CDASH_AUTH_TOKEN"] = "asdf"
out = install("-v", "--log-file=cdash_reports", "--log-format=cdash", "a")
assert "Using CDash auth token from environment" in out
with tmpdir.as_cwd(), capfd.disabled():
monkeypatch.setenv("SPACK_CDASH_AUTH_TOKEN", "asdf")
out = install("-v", "--log-file=cdash_reports", "--log-format=cdash", "pkg-a")
assert "Using CDash auth token from environment" in out
@pytest.mark.not_on_windows("Windows log_output logs phase header out of order")
@pytest.mark.disable_clean_stage_check
def test_cdash_configure_warning(tmpdir, mock_fetch, install_mockery, capfd):
# capfd interferes with Spack's capturing of e.g., Build.xml output
with capfd.disabled():
with tmpdir.as_cwd():
# Test would fail if install raised an error.
with capfd.disabled(), tmpdir.as_cwd():
# Test would fail if install raised an error.
# Ensure that even on non-x86_64 architectures, there are no
# dependencies installed
spec = spack.spec.Spec("configure-warning").concretized()
spec.clear_dependencies()
specfile = "./spec.json"
with open(specfile, "w") as f:
f.write(spec.to_json())
# Ensure that even on non-x86_64 architectures, there are no
# dependencies installed
spec = Spec("configure-warning").concretized()
spec.clear_dependencies()
specfile = "./spec.json"
with open(specfile, "w") as f:
f.write(spec.to_json())
install("--log-file=cdash_reports", "--log-format=cdash", specfile)
# Verify Configure.xml exists with expected contents.
report_dir = tmpdir.join("cdash_reports")
assert report_dir in tmpdir.listdir()
report_file = report_dir.join("Configure.xml")
assert report_file in report_dir.listdir()
content = report_file.open().read()
assert "foo: No such file or directory" in content
install("--log-file=cdash_reports", "--log-format=cdash", specfile)
# Verify Configure.xml exists with expected contents.
report_dir = tmpdir.join("cdash_reports")
assert report_dir in tmpdir.listdir()
report_file = report_dir.join("Configure.xml")
assert report_file in report_dir.listdir()
content = report_file.open().read()
assert "foo: No such file or directory" in content
@pytest.mark.not_on_windows("ArchSpec gives test platform debian rather than windows")
@ -953,7 +947,7 @@ def test_compiler_bootstrap(
assert CompilerSpec("gcc@=12.0") not in compilers.all_compiler_specs()
# Test succeeds if it does not raise an error
install("a%gcc@=12.0")
install("pkg-a%gcc@=12.0")
@pytest.mark.not_on_windows("Binary mirrors not supported on windows")
@ -993,8 +987,8 @@ def test_compiler_bootstrap_from_binary_mirror(
# Now make sure that when the compiler is installed from binary mirror,
# it also gets configured as a compiler. Test succeeds if it does not
# raise an error
install("--no-check-signature", "--cache-only", "--only", "dependencies", "b%gcc@=10.2.0")
install("--no-cache", "--only", "package", "b%gcc@10.2.0")
install("--no-check-signature", "--cache-only", "--only", "dependencies", "pkg-b%gcc@=10.2.0")
install("--no-cache", "--only", "package", "pkg-b%gcc@10.2.0")
@pytest.mark.not_on_windows("ArchSpec gives test platform debian rather than windows")
@ -1014,7 +1008,7 @@ def test_compiler_bootstrap_already_installed(
# Test succeeds if it does not raise an error
install("gcc@=12.0")
install("a%gcc@=12.0")
install("pkg-a%gcc@=12.0")
def test_install_fails_no_args(tmpdir):
@ -1196,7 +1190,7 @@ def test_report_filename_for_cdash(install_mockery_mutable_config, mock_fetch):
parser = argparse.ArgumentParser()
spack.cmd.install.setup_parser(parser)
args = parser.parse_args(
["--cdash-upload-url", "https://blahblah/submit.php?project=debugging", "a"]
["--cdash-upload-url", "https://blahblah/submit.php?project=debugging", "pkg-a"]
)
specs = spack.cmd.install.concrete_specs_from_cli(args, {})
filename = spack.cmd.install.report_filename(args, specs)

View File

@ -133,7 +133,7 @@ def test_maintainers_list_packages(mock_packages, capfd):
def test_maintainers_list_fails(mock_packages, capfd):
out = maintainers("a", fail_on_error=False)
out = maintainers("pkg-a", fail_on_error=False)
assert not out
assert maintainers.returncode == 1

View File

@ -11,6 +11,7 @@
import spack.config
import spack.main
import spack.modules
import spack.spec
import spack.store
module = spack.main.SpackCommand("module")
@ -178,8 +179,8 @@ def test_setdefault_command(mutable_database, mutable_config):
}
}
spack.config.set("modules", data)
# Install two different versions of a package
other_spec, preferred = "a@1.0", "a@2.0"
# Install two different versions of pkg-a
other_spec, preferred = "pkg-a@1.0", "pkg-a@2.0"
spack.spec.Spec(other_spec).concretized().package.do_install(fake=True)
spack.spec.Spec(preferred).concretized().package.do_install(fake=True)

View File

@ -28,8 +28,8 @@ def install(self, spec, prefix):
pass
"""
abc = set(("pkg-a", "pkg-b", "pkg-c"))
abd = set(("pkg-a", "pkg-b", "pkg-d"))
abc = {"mockpkg-a", "mockpkg-b", "mockpkg-c"}
abd = {"mockpkg-a", "mockpkg-b", "mockpkg-d"}
# Force all tests to use a git repository *in* the mock packages repo.
@ -53,27 +53,33 @@ def mock_pkg_git_repo(git, tmpdir_factory):
git("config", "user.name", "Spack Testing")
git("-c", "commit.gpgsign=false", "commit", "-m", "initial mock repo commit")
# add commit with pkg-a, pkg-b, pkg-c packages
mkdirp("pkg-a", "pkg-b", "pkg-c")
with open("pkg-a/package.py", "w") as f:
# add commit with mockpkg-a, mockpkg-b, mockpkg-c packages
mkdirp("mockpkg-a", "mockpkg-b", "mockpkg-c")
with open("mockpkg-a/package.py", "w") as f:
f.write(pkg_template.format(name="PkgA"))
with open("pkg-b/package.py", "w") as f:
with open("mockpkg-b/package.py", "w") as f:
f.write(pkg_template.format(name="PkgB"))
with open("pkg-c/package.py", "w") as f:
with open("mockpkg-c/package.py", "w") as f:
f.write(pkg_template.format(name="PkgC"))
git("add", "pkg-a", "pkg-b", "pkg-c")
git("-c", "commit.gpgsign=false", "commit", "-m", "add pkg-a, pkg-b, pkg-c")
git("add", "mockpkg-a", "mockpkg-b", "mockpkg-c")
git("-c", "commit.gpgsign=false", "commit", "-m", "add mockpkg-a, mockpkg-b, mockpkg-c")
# remove pkg-c, add pkg-d
with open("pkg-b/package.py", "a") as f:
f.write("\n# change pkg-b")
git("add", "pkg-b")
mkdirp("pkg-d")
with open("pkg-d/package.py", "w") as f:
# remove mockpkg-c, add mockpkg-d
with open("mockpkg-b/package.py", "a") as f:
f.write("\n# change mockpkg-b")
git("add", "mockpkg-b")
mkdirp("mockpkg-d")
with open("mockpkg-d/package.py", "w") as f:
f.write(pkg_template.format(name="PkgD"))
git("add", "pkg-d")
git("rm", "-rf", "pkg-c")
git("-c", "commit.gpgsign=false", "commit", "-m", "change pkg-b, remove pkg-c, add pkg-d")
git("add", "mockpkg-d")
git("rm", "-rf", "mockpkg-c")
git(
"-c",
"commit.gpgsign=false",
"commit",
"-m",
"change mockpkg-b, remove mockpkg-c, add mockpkg-d",
)
with spack.repo.use_repositories(str(repo_path)):
yield mock_repo_packages
@ -86,12 +92,11 @@ def mock_pkg_names():
# Be sure to include virtual packages since packages with stand-alone
# tests may inherit additional tests from the virtuals they provide,
# such as packages that implement `mpi`.
names = set(
return {
name
for name in repo.all_package_names(include_virtuals=True)
if not name.startswith("pkg-")
)
return names
if not name.startswith("mockpkg-")
}
def split(output):
@ -113,17 +118,17 @@ def test_mock_packages_path(mock_packages):
def test_pkg_add(git, mock_pkg_git_repo):
with working_dir(mock_pkg_git_repo):
mkdirp("pkg-e")
with open("pkg-e/package.py", "w") as f:
mkdirp("mockpkg-e")
with open("mockpkg-e/package.py", "w") as f:
f.write(pkg_template.format(name="PkgE"))
pkg("add", "pkg-e")
pkg("add", "mockpkg-e")
with working_dir(mock_pkg_git_repo):
try:
assert "A pkg-e/package.py" in git("status", "--short", output=str)
assert "A mockpkg-e/package.py" in git("status", "--short", output=str)
finally:
shutil.rmtree("pkg-e")
shutil.rmtree("mockpkg-e")
# Removing a package mid-run disrupts Spack's caching
if spack.repo.PATH.repos[0]._fast_package_checker:
spack.repo.PATH.repos[0]._fast_package_checker.invalidate()
@ -138,10 +143,10 @@ def test_pkg_list(mock_pkg_git_repo, mock_pkg_names):
assert sorted(mock_pkg_names) == sorted(out)
out = split(pkg("list", "HEAD^"))
assert sorted(mock_pkg_names.union(["pkg-a", "pkg-b", "pkg-c"])) == sorted(out)
assert sorted(mock_pkg_names.union(["mockpkg-a", "mockpkg-b", "mockpkg-c"])) == sorted(out)
out = split(pkg("list", "HEAD"))
assert sorted(mock_pkg_names.union(["pkg-a", "pkg-b", "pkg-d"])) == sorted(out)
assert sorted(mock_pkg_names.union(["mockpkg-a", "mockpkg-b", "mockpkg-d"])) == sorted(out)
# test with three dots to make sure pkg calls `git merge-base`
out = split(pkg("list", "HEAD^^..."))
@ -151,25 +156,25 @@ def test_pkg_list(mock_pkg_git_repo, mock_pkg_names):
@pytest.mark.not_on_windows("stdout format conflict")
def test_pkg_diff(mock_pkg_git_repo, mock_pkg_names):
out = split(pkg("diff", "HEAD^^", "HEAD^"))
assert out == ["HEAD^:", "pkg-a", "pkg-b", "pkg-c"]
assert out == ["HEAD^:", "mockpkg-a", "mockpkg-b", "mockpkg-c"]
out = split(pkg("diff", "HEAD^^", "HEAD"))
assert out == ["HEAD:", "pkg-a", "pkg-b", "pkg-d"]
assert out == ["HEAD:", "mockpkg-a", "mockpkg-b", "mockpkg-d"]
out = split(pkg("diff", "HEAD^", "HEAD"))
assert out == ["HEAD^:", "pkg-c", "HEAD:", "pkg-d"]
assert out == ["HEAD^:", "mockpkg-c", "HEAD:", "mockpkg-d"]
@pytest.mark.not_on_windows("stdout format conflict")
def test_pkg_added(mock_pkg_git_repo):
out = split(pkg("added", "HEAD^^", "HEAD^"))
assert ["pkg-a", "pkg-b", "pkg-c"] == out
assert ["mockpkg-a", "mockpkg-b", "mockpkg-c"] == out
out = split(pkg("added", "HEAD^^", "HEAD"))
assert ["pkg-a", "pkg-b", "pkg-d"] == out
assert ["mockpkg-a", "mockpkg-b", "mockpkg-d"] == out
out = split(pkg("added", "HEAD^", "HEAD"))
assert ["pkg-d"] == out
assert ["mockpkg-d"] == out
out = split(pkg("added", "HEAD", "HEAD"))
assert out == []
@ -184,7 +189,7 @@ def test_pkg_removed(mock_pkg_git_repo):
assert out == []
out = split(pkg("removed", "HEAD^", "HEAD"))
assert out == ["pkg-c"]
assert out == ["mockpkg-c"]
@pytest.mark.not_on_windows("stdout format conflict")
@ -196,34 +201,34 @@ def test_pkg_changed(mock_pkg_git_repo):
assert out == []
out = split(pkg("changed", "--type", "a", "HEAD^^", "HEAD^"))
assert out == ["pkg-a", "pkg-b", "pkg-c"]
assert out == ["mockpkg-a", "mockpkg-b", "mockpkg-c"]
out = split(pkg("changed", "--type", "r", "HEAD^^", "HEAD^"))
assert out == []
out = split(pkg("changed", "--type", "ar", "HEAD^^", "HEAD^"))
assert out == ["pkg-a", "pkg-b", "pkg-c"]
assert out == ["mockpkg-a", "mockpkg-b", "mockpkg-c"]
out = split(pkg("changed", "--type", "arc", "HEAD^^", "HEAD^"))
assert out == ["pkg-a", "pkg-b", "pkg-c"]
assert out == ["mockpkg-a", "mockpkg-b", "mockpkg-c"]
out = split(pkg("changed", "HEAD^", "HEAD"))
assert out == ["pkg-b"]
assert out == ["mockpkg-b"]
out = split(pkg("changed", "--type", "c", "HEAD^", "HEAD"))
assert out == ["pkg-b"]
assert out == ["mockpkg-b"]
out = split(pkg("changed", "--type", "a", "HEAD^", "HEAD"))
assert out == ["pkg-d"]
assert out == ["mockpkg-d"]
out = split(pkg("changed", "--type", "r", "HEAD^", "HEAD"))
assert out == ["pkg-c"]
assert out == ["mockpkg-c"]
out = split(pkg("changed", "--type", "ar", "HEAD^", "HEAD"))
assert out == ["pkg-c", "pkg-d"]
assert out == ["mockpkg-c", "mockpkg-d"]
out = split(pkg("changed", "--type", "arc", "HEAD^", "HEAD"))
assert out == ["pkg-b", "pkg-c", "pkg-d"]
assert out == ["mockpkg-b", "mockpkg-c", "mockpkg-d"]
# invalid type argument
with pytest.raises(spack.main.SpackCommandError):
@ -289,7 +294,7 @@ def test_pkg_canonical_source(mock_packages):
def test_pkg_hash(mock_packages):
output = pkg("hash", "a", "b").strip().split()
output = pkg("hash", "pkg-a", "pkg-b").strip().split()
assert len(output) == 2 and all(len(elt) == 32 for elt in output)
output = pkg("hash", "multimethod").strip().split()

View File

@ -59,7 +59,7 @@ def test_spec_concretizer_args(mutable_config, mutable_database):
def test_spec_parse_dependency_variant_value():
"""Verify that we can provide multiple key=value variants to multiple separate
packages within a spec string."""
output = spec("multivalue-variant fee=barbaz ^ a foobar=baz")
output = spec("multivalue-variant fee=barbaz ^ pkg-a foobar=baz")
assert "fee=barbaz" in output
assert "foobar=baz" in output

View File

@ -10,10 +10,14 @@
from llnl.util.filesystem import copy_tree
import spack.cmd.common.arguments
import spack.cmd.install
import spack.cmd.test
import spack.config
import spack.install_test
import spack.package_base
import spack.paths
import spack.spec
import spack.store
from spack.install_test import TestStatus
from spack.main import SpackCommand

View File

@ -11,7 +11,7 @@
import llnl.util.filesystem as fs
import spack.compiler
import spack.compilers as compilers
import spack.compilers
import spack.spec
import spack.util.environment
from spack.compiler import Compiler
@ -25,12 +25,14 @@ class MockOs:
pass
compiler_name = "gcc"
compiler_cls = compilers.class_for_compiler_name(compiler_name)
compiler_cls = spack.compilers.class_for_compiler_name(compiler_name)
monkeypatch.setattr(compiler_cls, "cc_version", lambda x: version)
compiler_id = compilers.CompilerID(os=MockOs, compiler_name=compiler_name, version=None)
variation = compilers.NameVariation(prefix="", suffix="")
return compilers.DetectVersionArgs(
compiler_id = spack.compilers.CompilerID(
os=MockOs, compiler_name=compiler_name, version=None
)
variation = spack.compilers.NameVariation(prefix="", suffix="")
return spack.compilers.DetectVersionArgs(
id=compiler_id, variation=variation, language="cc", path=path
)
@ -56,15 +58,21 @@ def test_multiple_conflicting_compiler_definitions(mutable_config):
mutable_config.update_config("compilers", compiler_config)
arch_spec = spack.spec.ArchSpec(("test", "test", "test"))
cmp = compilers.compiler_for_spec("clang@=0.0.0", arch_spec)
cmp = spack.compilers.compiler_for_spec("clang@=0.0.0", arch_spec)
assert cmp.f77 == "f77"
def test_get_compiler_duplicates(config):
def test_get_compiler_duplicates(mutable_config, compiler_factory):
# In this case there is only one instance of the specified compiler in
# the test configuration (so it is not actually a duplicate), but the
# method behaves the same.
cfg_file_to_duplicates = compilers.get_compiler_duplicates(
cnl_compiler = compiler_factory(spec="gcc@4.5.0", operating_system="CNL")
# CNL compiler has no target attribute, and this is essential to make detection pass
del cnl_compiler["compiler"]["target"]
mutable_config.set(
"compilers", [compiler_factory(spec="gcc@4.5.0", operating_system="SuSE11"), cnl_compiler]
)
cfg_file_to_duplicates = spack.compilers.get_compiler_duplicates(
"gcc@4.5.0", spack.spec.ArchSpec("cray-CNL-xeon")
)
@ -73,13 +81,6 @@ def test_get_compiler_duplicates(config):
assert len(duplicates) == 1
def test_all_compilers(config):
all_compilers = compilers.all_compilers()
filtered = [x for x in all_compilers if str(x.spec) == "clang@=3.3"]
filtered = [x for x in filtered if x.operating_system == "SuSE11"]
assert len(filtered) == 1
@pytest.mark.parametrize(
"input_version,expected_version,expected_error",
[(None, None, "Couldn't get version for compiler /usr/bin/gcc"), ("4.9", "4.9", None)],
@ -88,7 +89,7 @@ def test_version_detection_is_empty(
make_args_for_version, input_version, expected_version, expected_error
):
args = make_args_for_version(version=input_version)
result, error = compilers.detect_version(args)
result, error = spack.compilers.detect_version(args)
if not error:
assert result.id.version == expected_version
@ -104,7 +105,7 @@ def test_compiler_flags_from_config_are_grouped():
"modules": None,
}
compiler = compilers.compiler_from_dict(compiler_entry)
compiler = spack.compilers.compiler_from_dict(compiler_entry)
assert any(x == "-foo-flag foo-val" for x in compiler.flags["cflags"])
@ -253,8 +254,8 @@ def test_get_compiler_link_paths_load_env(working_env, monkeypatch, tmpdir):
gcc = str(tmpdir.join("gcc"))
with open(gcc, "w") as f:
f.write(
"""#!/bin/bash
if [[ $ENV_SET == "1" && $MODULE_LOADED == "1" ]]; then
"""#!/bin/sh
if [ "$ENV_SET" = "1" ] && [ "$MODULE_LOADED" = "1" ]; then
echo '"""
+ no_flag_output
+ """'
@ -288,7 +289,7 @@ def flag_value(flag, spec):
else:
compiler_entry = copy(default_compiler_entry)
compiler_entry["spec"] = spec
compiler = compilers.compiler_from_dict(compiler_entry)
compiler = spack.compilers.compiler_from_dict(compiler_entry)
return getattr(compiler, flag)
@ -658,9 +659,27 @@ def test_xl_r_flags():
"compiler_spec,expected_result",
[("gcc@4.7.2", False), ("clang@3.3", False), ("clang@8.0.0", True)],
)
def test_detecting_mixed_toolchains(compiler_spec, expected_result, config):
compiler = compilers.compilers_for_spec(compiler_spec).pop()
assert compilers.is_mixed_toolchain(compiler) is expected_result
def test_detecting_mixed_toolchains(
compiler_spec, expected_result, mutable_config, compiler_factory
):
mixed_c = compiler_factory(spec="clang@8.0.0", operating_system="debian6")
mixed_c["compiler"]["paths"] = {
"cc": "/path/to/clang-8",
"cxx": "/path/to/clang++-8",
"f77": "/path/to/gfortran-9",
"fc": "/path/to/gfortran-9",
}
mutable_config.set(
"compilers",
[
compiler_factory(spec="gcc@4.7.2", operating_system="debian6"),
compiler_factory(spec="clang@3.3", operating_system="debian6"),
mixed_c,
],
)
compiler = spack.compilers.compilers_for_spec(compiler_spec).pop()
assert spack.compilers.is_mixed_toolchain(compiler) is expected_result
@pytest.mark.regression("14798,13733")
@ -701,8 +720,8 @@ def test_compiler_get_real_version(working_env, monkeypatch, tmpdir):
gcc = str(tmpdir.join("gcc"))
with open(gcc, "w") as f:
f.write(
"""#!/bin/bash
if [[ $CMP_ON == "1" ]]; then
"""#!/bin/sh
if [ "$CMP_ON" = "1" ]; then
echo "$CMP_VER"
fi
"""
@ -739,6 +758,49 @@ def module(*args):
assert version == test_version
@pytest.mark.regression("42679")
def test_get_compilers(config):
"""Tests that we can select compilers whose versions differ only for a suffix."""
common = {
"flags": {},
"operating_system": "ubuntu23.10",
"target": "x86_64",
"modules": [],
"environment": {},
"extra_rpaths": [],
}
with_suffix = {
"spec": "gcc@13.2.0-suffix",
"paths": {
"cc": "/usr/bin/gcc-13.2.0-suffix",
"cxx": "/usr/bin/g++-13.2.0-suffix",
"f77": "/usr/bin/gfortran-13.2.0-suffix",
"fc": "/usr/bin/gfortran-13.2.0-suffix",
},
**common,
}
without_suffix = {
"spec": "gcc@13.2.0",
"paths": {
"cc": "/usr/bin/gcc-13.2.0",
"cxx": "/usr/bin/g++-13.2.0",
"f77": "/usr/bin/gfortran-13.2.0",
"fc": "/usr/bin/gfortran-13.2.0",
},
**common,
}
compilers = [{"compiler": without_suffix}, {"compiler": with_suffix}]
assert spack.compilers.get_compilers(
compilers, cspec=spack.spec.CompilerSpec("gcc@=13.2.0-suffix")
) == [spack.compilers._compiler_from_config_entry(with_suffix)]
assert spack.compilers.get_compilers(
compilers, cspec=spack.spec.CompilerSpec("gcc@=13.2.0")
) == [spack.compilers._compiler_from_config_entry(without_suffix)]
def test_compiler_get_real_version_fails(working_env, monkeypatch, tmpdir):
# Test variables
test_version = "2.2.2"
@ -747,8 +809,8 @@ def test_compiler_get_real_version_fails(working_env, monkeypatch, tmpdir):
gcc = str(tmpdir.join("gcc"))
with open(gcc, "w") as f:
f.write(
"""#!/bin/bash
if [[ $CMP_ON == "1" ]]; then
"""#!/bin/sh
if [ "$CMP_ON" = "1" ]; then
echo "$CMP_VER"
fi
"""
@ -801,7 +863,7 @@ def test_compiler_flags_use_real_version(working_env, monkeypatch, tmpdir):
gcc = str(tmpdir.join("gcc"))
with open(gcc, "w") as f:
f.write(
"""#!/bin/bash
"""#!/bin/sh
echo "4.4.4"
"""
) # Version for which c++11 flag is -std=c++0x

View File

@ -23,6 +23,8 @@
import spack.platforms
import spack.repo
import spack.solver.asp
import spack.store
import spack.util.file_cache
import spack.variant as vt
from spack.concretize import find_spec
from spack.spec import CompilerSpec, Spec
@ -203,7 +205,9 @@ def change(self, changes=None):
# TODO: in case tests using this fixture start failing.
if sys.modules.get("spack.pkg.changing.changing"):
del sys.modules["spack.pkg.changing.changing"]
if sys.modules.get("spack.pkg.changing.root"):
del sys.modules["spack.pkg.changing.root"]
if sys.modules.get("spack.pkg.changing"):
del sys.modules["spack.pkg.changing"]
# Change the recipe
@ -222,6 +226,20 @@ def change(self, changes=None):
yield _changing_pkg
@pytest.fixture()
def clang12_with_flags(compiler_factory):
c = compiler_factory(spec="clang@12.2.0", operating_system="redhat6")
c["compiler"]["flags"] = {"cflags": "-O3", "cxxflags": "-O3"}
return c
@pytest.fixture()
def gcc11_with_flags(compiler_factory):
c = compiler_factory(spec="gcc@11.1.0", operating_system="redhat6")
c["compiler"]["flags"] = {"cflags": "-O0 -g", "cxxflags": "-O0 -g", "fflags": "-O0 -g"}
return c
# This must use the mutable_config fixture because the test
# adjusting_default_target_based_on_compiler uses the current_host fixture,
# which changes the config.
@ -314,18 +332,35 @@ def test_provides_handles_multiple_providers_of_same_version(self):
assert Spec("builtin.mock.multi-provider-mpi@1.10.0") in providers
assert Spec("builtin.mock.multi-provider-mpi@1.8.8") in providers
def test_different_compilers_get_different_flags(self):
def test_different_compilers_get_different_flags(
self, mutable_config, clang12_with_flags, gcc11_with_flags
):
"""Tests that nodes get the flags of the associated compiler."""
mutable_config.set("compilers", [clang12_with_flags, gcc11_with_flags])
client = Spec(
"cmake-client %gcc@11.1.0 platform=test os=fe target=fe"
+ " ^cmake %clang@12.2.0 platform=test os=fe target=fe"
)
client.concretize()
" ^cmake %clang@12.2.0 platform=test os=fe target=fe"
).concretized()
cmake = client["cmake"]
assert set(client.compiler_flags["cflags"]) == set(["-O0", "-g"])
assert set(cmake.compiler_flags["cflags"]) == set(["-O3"])
assert set(client.compiler_flags["fflags"]) == set(["-O0", "-g"])
assert set(client.compiler_flags["cflags"]) == {"-O0", "-g"}
assert set(cmake.compiler_flags["cflags"]) == {"-O3"}
assert set(client.compiler_flags["fflags"]) == {"-O0", "-g"}
assert not set(cmake.compiler_flags["fflags"])
@pytest.mark.regression("9908")
def test_spec_flags_maintain_order(self, mutable_config, gcc11_with_flags):
"""Tests that Spack assembles flags in a consistent way (i.e. with the same ordering),
for successive concretizations.
"""
mutable_config.set("compilers", [gcc11_with_flags])
spec_str = "libelf %gcc@11.1.0 os=redhat6"
for _ in range(3):
s = Spec(spec_str).concretized()
assert all(
s.compiler_flags[x] == ["-O0", "-g"] for x in ("cflags", "cxxflags", "fflags")
)
@pytest.mark.xfail(reason="Broken, needs to be fixed")
def test_compiler_flags_from_compiler_and_dependent(self):
client = Spec("cmake-client %clang@12.2.0 platform=test os=fe target=fe cflags==-g")
client.concretize()
@ -333,9 +368,10 @@ def test_compiler_flags_from_compiler_and_dependent(self):
for spec in [client, cmake]:
assert spec.compiler_flags["cflags"] == ["-O3", "-g"]
def test_compiler_flags_differ_identical_compilers(self):
def test_compiler_flags_differ_identical_compilers(self, mutable_config, clang12_with_flags):
mutable_config.set("compilers", [clang12_with_flags])
# Correct arch to use test compiler that has flags
spec = Spec("a %clang@12.2.0 platform=test os=fe target=fe")
spec = Spec("pkg-a %clang@12.2.0 platform=test os=fe target=fe")
# Get the compiler that matches the spec (
compiler = spack.compilers.compiler_for_spec("clang@=12.2.0", spec.architecture)
@ -349,6 +385,9 @@ def test_compiler_flags_differ_identical_compilers(self):
spec.concretize()
assert spec.satisfies("cflags=-O2")
@pytest.mark.only_clingo(
"Optional compiler propagation isn't deprecated for original concretizer"
)
def test_concretize_compiler_flag_propagate(self):
spec = Spec("hypre cflags=='-g' ^openblas")
spec.concretize()
@ -385,28 +424,23 @@ def test_compiler_inherited_upwards(self):
for dep in spec.traverse():
assert "%clang" in dep
def test_architecture_inheritance(self):
"""test_architecture_inheritance is likely to fail with an
UnavailableCompilerVersionError if the architecture is concretized
incorrectly.
"""
spec = Spec("cmake-client %gcc@11.1.0 os=fe ^ cmake")
spec.concretize()
assert spec["cmake"].architecture == spec.architecture
@pytest.mark.only_clingo("Fixing the parser broke this test for the original concretizer")
def test_architecture_deep_inheritance(self, mock_targets):
def test_architecture_deep_inheritance(self, mock_targets, compiler_factory):
"""Make sure that indirect dependencies receive architecture
information from the root even when partial architecture information
is provided by an intermediate dependency.
"""
spec_str = "mpileaks %gcc@4.5.0 os=CNL target=nocona" " ^dyninst os=CNL ^callpath os=CNL"
spec = Spec(spec_str).concretized()
for s in spec.traverse(root=False):
assert s.architecture.target == spec.architecture.target
cnl_compiler = compiler_factory(spec="gcc@4.5.0", operating_system="CNL")
# CNL compiler has no target attribute, and this is essential to make detection pass
del cnl_compiler["compiler"]["target"]
with spack.config.override("compilers", [cnl_compiler]):
spec_str = "mpileaks %gcc@4.5.0 os=CNL target=nocona ^dyninst os=CNL ^callpath os=CNL"
spec = Spec(spec_str).concretized()
for s in spec.traverse(root=False):
assert s.architecture.target == spec.architecture.target
def test_compiler_flags_from_user_are_grouped(self):
spec = Spec('a%gcc cflags="-O -foo-flag foo-val" platform=test')
spec = Spec('pkg-a%gcc cflags="-O -foo-flag foo-val" platform=test')
spec.concretize()
cflags = spec.compiler_flags["cflags"]
assert any(x == "-foo-flag foo-val" for x in cflags)
@ -458,19 +492,54 @@ def test_concretize_two_virtuals_with_dual_provider_and_a_conflict(self):
@pytest.mark.only_clingo(
"Optional compiler propagation isn't deprecated for original concretizer"
)
def test_concretize_propagate_disabled_variant(self):
"""Test a package variant value was passed from its parent."""
spec = Spec("hypre~~shared ^openblas")
spec.concretize()
assert spec.satisfies("^openblas~shared")
@pytest.mark.parametrize(
"spec_str,expected_propagation",
[
("hypre~~shared ^openblas+shared", [("hypre", "~shared"), ("openblas", "+shared")]),
# Propagates past a node that doesn't have the variant
("hypre~~shared ^openblas", [("hypre", "~shared"), ("openblas", "~shared")]),
(
"ascent~~shared +adios2",
[("ascent", "~shared"), ("adios2", "~shared"), ("bzip2", "~shared")],
),
# Propagates below a node that uses the other value explicitly
(
"ascent~~shared +adios2 ^adios2+shared",
[("ascent", "~shared"), ("adios2", "+shared"), ("bzip2", "~shared")],
),
(
"ascent++shared +adios2 ^adios2~shared",
[("ascent", "+shared"), ("adios2", "~shared"), ("bzip2", "+shared")],
),
],
)
def test_concretize_propagate_disabled_variant(self, spec_str, expected_propagation):
"""Tests various patterns of boolean variant propagation"""
spec = Spec(spec_str).concretized()
for key, expected_satisfies in expected_propagation:
spec[key].satisfies(expected_satisfies)
@pytest.mark.only_clingo(
"Optional compiler propagation isn't deprecated for original concretizer"
)
def test_concretize_propagated_variant_is_not_passed_to_dependent(self):
"""Test a package variant value was passed from its parent."""
spec = Spec("hypre~~shared ^openblas+shared")
spec = Spec("ascent~~shared +adios2 ^adios2+shared")
spec.concretize()
assert spec.satisfies("^openblas+shared")
assert spec.satisfies("^adios2+shared")
assert spec.satisfies("^bzip2~shared")
@pytest.mark.only_clingo(
"Optional compiler propagation isn't deprecated for original concretizer"
)
def test_concretize_propagate_specified_variant(self):
"""Test that only the specified variant is propagated to the dependencies"""
spec = Spec("parent-foo-bar ~~foo")
spec.concretize()
assert spec.satisfies("~foo") and spec.satisfies("^dependency-foo-bar~foo")
assert spec.satisfies("+bar") and not spec.satisfies("^dependency-foo-bar+bar")
@pytest.mark.only_clingo("Original concretizer is allowed to forego variant propagation")
def test_concretize_propagate_multivalue_variant(self):
@ -479,20 +548,20 @@ def test_concretize_propagate_multivalue_variant(self):
spec = Spec("multivalue-variant foo==baz,fee")
spec.concretize()
assert spec.satisfies("^a foo=baz,fee")
assert spec.satisfies("^b foo=baz,fee")
assert not spec.satisfies("^a foo=bar")
assert not spec.satisfies("^b foo=bar")
assert spec.satisfies("^pkg-a foo=baz,fee")
assert spec.satisfies("^pkg-b foo=baz,fee")
assert not spec.satisfies("^pkg-a foo=bar")
assert not spec.satisfies("^pkg-b foo=bar")
def test_no_matching_compiler_specs(self, mock_low_high_config):
# only relevant when not building compilers as needed
with spack.concretize.enable_compiler_existence_check():
s = Spec("a %gcc@=0.0.0")
s = Spec("pkg-a %gcc@=0.0.0")
with pytest.raises(spack.concretize.UnavailableCompilerVersionError):
s.concretize()
def test_no_compilers_for_arch(self):
s = Spec("a arch=linux-rhel0-x86_64")
s = Spec("pkg-a arch=linux-rhel0-x86_64")
with pytest.raises(spack.error.SpackError):
s.concretize()
@ -701,7 +770,7 @@ def test_regression_issue_7941(self):
# The string representation of a spec containing
# an explicit multi-valued variant and a dependency
# might be parsed differently than the originating spec
s = Spec("a foobar=bar ^b")
s = Spec("pkg-a foobar=bar ^pkg-b")
t = Spec(str(s))
s.concretize()
@ -803,9 +872,12 @@ def test_concretize_anonymous_dep(self, spec_str):
],
)
@pytest.mark.only_clingo("Original concretizer cannot work around conflicts")
def test_compiler_conflicts_in_package_py(self, spec_str, expected_str):
s = Spec(spec_str).concretized()
assert s.satisfies(expected_str)
def test_compiler_conflicts_in_package_py(
self, spec_str, expected_str, clang12_with_flags, gcc11_with_flags
):
with spack.config.override("compilers", [clang12_with_flags, gcc11_with_flags]):
s = Spec(spec_str).concretized()
assert s.satisfies(expected_str)
@pytest.mark.parametrize(
"spec_str,expected,unexpected",
@ -1070,14 +1142,14 @@ def test_conditional_provides_or_depends_on(self):
[
# Check that True is treated correctly and attaches test deps
# to all nodes in the DAG
("a", True, ["a"], []),
("a foobar=bar", True, ["a", "b"], []),
("pkg-a", True, ["pkg-a"], []),
("pkg-a foobar=bar", True, ["pkg-a", "pkg-b"], []),
# Check that a list of names activates the dependency only for
# packages in that list
("a foobar=bar", ["a"], ["a"], ["b"]),
("a foobar=bar", ["b"], ["b"], ["a"]),
("pkg-a foobar=bar", ["pkg-a"], ["pkg-a"], ["pkg-b"]),
("pkg-a foobar=bar", ["pkg-b"], ["pkg-b"], ["pkg-a"]),
# Check that False disregard test dependencies
("a foobar=bar", False, [], ["a", "b"]),
("pkg-a foobar=bar", False, [], ["pkg-a", "pkg-b"]),
],
)
def test_activating_test_dependencies(self, spec_str, tests_arg, with_dep, without_dep):
@ -1095,16 +1167,18 @@ def test_activating_test_dependencies(self, spec_str, tests_arg, with_dep, witho
@pytest.mark.regression("20019")
@pytest.mark.only_clingo("Use case not supported by the original concretizer")
def test_compiler_match_is_preferred_to_newer_version(self):
def test_compiler_match_is_preferred_to_newer_version(self, compiler_factory):
# This spec depends on openblas. Openblas has a conflict
# that doesn't allow newer versions with gcc@4.4.0. Check
# that an old version of openblas is selected, rather than
# a different compiler for just that node.
spec_str = "simple-inheritance+openblas %gcc@10.1.0 os=redhat6"
s = Spec(spec_str).concretized()
assert "openblas@0.2.15" in s
assert s["openblas"].satisfies("%gcc@10.1.0")
with spack.config.override(
"compilers", [compiler_factory(spec="gcc@10.1.0", operating_system="redhat6")]
):
spec_str = "simple-inheritance+openblas %gcc@10.1.0 os=redhat6"
s = Spec(spec_str).concretized()
assert "openblas@0.2.15" in s
assert s["openblas"].satisfies("%gcc@10.1.0")
@pytest.mark.regression("19981")
def test_target_ranges_in_conflicts(self):
@ -1129,8 +1203,12 @@ def test_variant_not_default(self):
@pytest.mark.regression("20055")
@pytest.mark.only_clingo("Use case not supported by the original concretizer")
def test_custom_compiler_version(self):
s = Spec("a %gcc@10foo os=redhat6").concretized()
def test_custom_compiler_version(self, mutable_config, compiler_factory, monkeypatch):
mutable_config.set(
"compilers", [compiler_factory(spec="gcc@10foo", operating_system="redhat6")]
)
monkeypatch.setattr(spack.compiler.Compiler, "real_version", "10.2.1")
s = Spec("pkg-a %gcc@10foo os=redhat6").concretized()
assert "%gcc@10foo" in s
def test_all_patches_applied(self):
@ -1255,10 +1333,10 @@ def test_reuse_installed_packages_when_package_def_changes(
@pytest.mark.only_clingo("Use case not supported by the original concretizer")
def test_reuse_with_flags(self, mutable_database, mutable_config):
spack.config.set("concretizer:reuse", True)
spec = Spec("a cflags=-g cxxflags=-g").concretized()
spec = Spec("pkg-a cflags=-g cxxflags=-g").concretized()
spack.store.STORE.db.add(spec, None)
testspec = Spec("a cflags=-g")
testspec = Spec("pkg-a cflags=-g")
testspec.concretize()
assert testspec == spec
@ -1329,11 +1407,16 @@ def test_external_with_non_default_variant_as_dependency(self):
("mpileaks%gcc@10.2.1 platform=test os=redhat6", "os=redhat6"),
],
)
def test_os_selection_when_multiple_choices_are_possible(self, spec_str, expected_os):
s = Spec(spec_str).concretized()
for node in s.traverse():
assert node.satisfies(expected_os)
def test_os_selection_when_multiple_choices_are_possible(
self, spec_str, expected_os, compiler_factory
):
# GCC 10.2.1 is defined both for debian and for redhat
with spack.config.override(
"compilers", [compiler_factory(spec="gcc@10.2.1", operating_system="redhat6")]
):
s = Spec(spec_str).concretized()
for node in s.traverse():
assert node.satisfies(expected_os)
@pytest.mark.regression("22718")
@pytest.mark.parametrize(
@ -1461,6 +1544,30 @@ def test_sticky_variant_in_package(self):
s = Spec("sticky-variant %clang").concretized()
assert s.satisfies("%clang") and s.satisfies("~allow-gcc")
@pytest.mark.regression("42172")
@pytest.mark.only_clingo("Original concretizer cannot use sticky variants")
@pytest.mark.parametrize(
"spec,allow_gcc",
[
("sticky-variant@1.0+allow-gcc", True),
("sticky-variant@1.0~allow-gcc", False),
("sticky-variant@1.0", False),
],
)
def test_sticky_variant_in_external(self, spec, allow_gcc):
# setup external for sticky-variant+allow-gcc
config = {"externals": [{"spec": spec, "prefix": "/fake/path"}], "buildable": False}
spack.config.set("packages:sticky-variant", config)
maybe = llnl.util.lang.nullcontext if allow_gcc else pytest.raises
with maybe(spack.error.SpackError):
s = Spec("sticky-variant-dependent%gcc").concretized()
if allow_gcc:
assert s.satisfies("%gcc")
assert s["sticky-variant"].satisfies("+allow-gcc")
assert s["sticky-variant"].external
@pytest.mark.only_clingo("Use case not supported by the original concretizer")
def test_do_not_invent_new_concrete_versions_unless_necessary(self):
# ensure we select a known satisfying version rather than creating
@ -1566,33 +1673,35 @@ def test_installed_version_is_selected_only_for_reuse(
assert not new_root["changing"].satisfies("@1.0")
@pytest.mark.regression("28259")
def test_reuse_with_unknown_namespace_dont_raise(self, mock_custom_repository):
def test_reuse_with_unknown_namespace_dont_raise(
self, temporary_store, mock_custom_repository
):
with spack.repo.use_repositories(mock_custom_repository, override=False):
s = Spec("c").concretized()
s = Spec("pkg-c").concretized()
assert s.namespace != "builtin.mock"
s.package.do_install(fake=True, explicit=True)
with spack.config.override("concretizer:reuse", True):
s = Spec("c").concretized()
s = Spec("pkg-c").concretized()
assert s.namespace == "builtin.mock"
@pytest.mark.regression("28259")
def test_reuse_with_unknown_package_dont_raise(self, tmpdir, monkeypatch):
builder = spack.repo.MockRepositoryBuilder(tmpdir, namespace="myrepo")
builder.add_package("c")
def test_reuse_with_unknown_package_dont_raise(self, tmpdir, temporary_store, monkeypatch):
builder = spack.repo.MockRepositoryBuilder(tmpdir.mkdir("mock.repo"), namespace="myrepo")
builder.add_package("pkg-c")
with spack.repo.use_repositories(builder.root, override=False):
s = Spec("c").concretized()
s = Spec("pkg-c").concretized()
assert s.namespace == "myrepo"
s.package.do_install(fake=True, explicit=True)
del sys.modules["spack.pkg.myrepo.c"]
del sys.modules["spack.pkg.myrepo.pkg-c"]
del sys.modules["spack.pkg.myrepo"]
builder.remove("c")
builder.remove("pkg-c")
with spack.repo.use_repositories(builder.root, override=False) as repos:
# TODO (INJECT CONFIGURATION): unclear why the cache needs to be invalidated explicitly
repos.repos[0]._pkg_checker.invalidate()
with spack.config.override("concretizer:reuse", True):
s = Spec("c").concretized()
s = Spec("pkg-c").concretized()
assert s.namespace == "builtin.mock"
@pytest.mark.parametrize(
@ -1704,20 +1813,20 @@ def test_misleading_error_message_on_version(self, mutable_database):
@pytest.mark.only_clingo("Use case not supported by the original concretizer")
def test_version_weight_and_provenance(self):
"""Test package preferences during coconcretization."""
reusable_specs = [Spec(spec_str).concretized() for spec_str in ("b@0.9", "b@1.0")]
root_spec = Spec("a foobar=bar")
reusable_specs = [Spec(spec_str).concretized() for spec_str in ("pkg-b@0.9", "pkg-b@1.0")]
root_spec = Spec("pkg-a foobar=bar")
with spack.config.override("concretizer:reuse", True):
solver = spack.solver.asp.Solver()
setup = spack.solver.asp.SpackSolverSetup()
result, _, _ = solver.driver.solve(setup, [root_spec], reuse=reusable_specs)
# The result here should have a single spec to build ('a')
# and it should be using b@1.0 with a version badness of 2
# The result here should have a single spec to build ('pkg-a')
# and it should be using pkg-b@1.0 with a version badness of 2
# The provenance is:
# version_declared("b","1.0",0,"package_py").
# version_declared("b","0.9",1,"package_py").
# version_declared("b","1.0",2,"installed").
# version_declared("b","0.9",3,"installed").
# version_declared("pkg-b","1.0",0,"package_py").
# version_declared("pkg-b","0.9",1,"package_py").
# version_declared("pkg-b","1.0",2,"installed").
# version_declared("pkg-b","0.9",3,"installed").
#
# Depending on the target, it may also use gnuconfig
result_spec = result.specs[0]
@ -1730,12 +1839,12 @@ def test_version_weight_and_provenance(self):
for criterion in criteria:
assert criterion in result.criteria
assert result_spec.satisfies("^b@1.0")
assert result_spec.satisfies("^pkg-b@1.0")
@pytest.mark.regression("31169")
@pytest.mark.only_clingo("Use case not supported by the original concretizer")
def test_not_reusing_incompatible_os_or_compiler(self):
root_spec = Spec("b")
root_spec = Spec("pkg-b")
s = root_spec.concretized()
wrong_compiler, wrong_os = s.copy(), s.copy()
wrong_compiler.compiler = spack.spec.CompilerSpec("gcc@12.1.0")
@ -1990,7 +2099,7 @@ def test_external_python_extension_find_unified_python(self):
"specs",
[
["mpileaks^ callpath ^dyninst@8.1.1:8 ^mpich2@1.3:1"],
["multivalue-variant ^a@2:2"],
["multivalue-variant ^pkg-a@2:2"],
["v1-consumer ^conditional-provider@1:1 +disable-v1"],
],
)
@ -2040,7 +2149,7 @@ def test_compiler_match_constraints_when_selected(self):
},
]
spack.config.set("compilers", compiler_configuration)
s = Spec("a %gcc@:11").concretized()
s = Spec("pkg-a %gcc@:11").concretized()
assert s.compiler.version == ver("=11.1.0"), s
@pytest.mark.regression("36339")
@ -2061,7 +2170,7 @@ def test_compiler_with_custom_non_numeric_version(self, mock_executable):
}
]
spack.config.set("compilers", compiler_configuration)
s = Spec("a %gcc@foo").concretized()
s = Spec("pkg-a %gcc@foo").concretized()
assert s.compiler.version == ver("=foo")
@pytest.mark.regression("36628")
@ -2087,7 +2196,7 @@ def test_concretization_with_compilers_supporting_target_any(self):
]
with spack.config.override("compilers", compiler_configuration):
s = spack.spec.Spec("a").concretized()
s = Spec("pkg-a").concretized()
assert s.satisfies("%gcc@12.1.0")
@pytest.mark.parametrize("spec_str", ["mpileaks", "mpileaks ^mpich"])
@ -2122,7 +2231,7 @@ def test_dont_define_new_version_from_input_if_checksum_required(self, working_e
with pytest.raises(spack.error.UnsatisfiableSpecError):
# normally spack concretizes to @=3.0 if it's not defined in package.py, except
# when checksums are required
Spec("a@=3.0").concretized()
Spec("pkg-a@=3.0").concretized()
@pytest.mark.regression("39570")
@pytest.mark.db
@ -2142,6 +2251,33 @@ def test_reuse_python_from_cli_and_extension_from_db(self, mutable_database):
assert with_reuse.dag_hash() == without_reuse.dag_hash()
@pytest.mark.regression("35536")
@pytest.mark.parametrize(
"spec_str,expected_namespaces",
[
# Single node with fully qualified namespace
("builtin.mock.gmake", {"gmake": "builtin.mock"}),
# Dependency with fully qualified namespace
("hdf5 ^builtin.mock.gmake", {"gmake": "builtin.mock", "hdf5": "duplicates.test"}),
("hdf5 ^gmake", {"gmake": "duplicates.test", "hdf5": "duplicates.test"}),
],
)
@pytest.mark.only_clingo("Uses specs requiring multiple gmake specs")
def test_select_lower_priority_package_from_repository_stack(
self, spec_str, expected_namespaces
):
"""Tests that a user can explicitly select a lower priority, fully qualified dependency
from cli.
"""
# 'builtin.mock" and "duplicates.test" share a 'gmake' package
additional_repo = os.path.join(spack.paths.repos_path, "duplicates.test")
with spack.repo.use_repositories(additional_repo, override=False):
s = Spec(spec_str).concretized()
for name, namespace in expected_namespaces.items():
assert s[name].concrete
assert s[name].namespace == namespace
@pytest.fixture()
def duplicates_test_repository():
@ -2320,7 +2456,9 @@ def test_drop_moving_targets(v_str, v_opts, checksummed):
class TestConcreteSpecsByHash:
"""Tests the container of concrete specs"""
@pytest.mark.parametrize("input_specs", [["a"], ["a foobar=bar", "b"], ["a foobar=baz", "b"]])
@pytest.mark.parametrize(
"input_specs", [["pkg-a"], ["pkg-a foobar=bar", "pkg-b"], ["pkg-a foobar=baz", "pkg-b"]]
)
def test_adding_specs(self, input_specs, default_mock_concretization):
"""Tests that concrete specs in the container are equivalent, but stored as different
objects in memory.

View File

@ -16,8 +16,8 @@
version_error_messages = [
"Cannot satisfy 'fftw@:1.0' and 'fftw@1.1:",
" required because quantum-espresso depends on fftw@:1.0",
" required because quantum-espresso ^fftw@1.1: requested from CLI",
" required because quantum-espresso ^fftw@1.1: requested from CLI",
" required because quantum-espresso ^fftw@1.1: requested explicitly",
" required because quantum-espresso ^fftw@1.1: requested explicitly",
]
external_error_messages = [
@ -30,15 +30,15 @@
" which was not satisfied"
),
" 'quantum-espresso+veritas' required",
" required because quantum-espresso+veritas requested from CLI",
" required because quantum-espresso+veritas requested explicitly",
]
variant_error_messages = [
"'fftw' required multiple values for single-valued variant 'mpi'",
" Requested '~mpi' and '+mpi'",
" required because quantum-espresso depends on fftw+mpi when +invino",
" required because quantum-espresso+invino ^fftw~mpi requested from CLI",
" required because quantum-espresso+invino ^fftw~mpi requested from CLI",
" required because quantum-espresso+invino ^fftw~mpi requested explicitly",
" required because quantum-espresso+invino ^fftw~mpi requested explicitly",
]
external_config = {

View File

@ -105,7 +105,7 @@ def test_preferred_variants_from_wildcard(self):
@pytest.mark.parametrize(
"compiler_str,spec_str",
[("gcc@=4.5.0", "mpileaks"), ("clang@=12.0.0", "mpileaks"), ("gcc@=4.5.0", "openmpi")],
[("gcc@=4.8.0", "mpileaks"), ("clang@=12.0.0", "mpileaks"), ("gcc@=4.8.0", "openmpi")],
)
def test_preferred_compilers(self, compiler_str, spec_str):
"""Test preferred compilers are applied correctly"""
@ -504,3 +504,13 @@ def test_sticky_variant_accounts_for_packages_yaml(self):
with spack.config.override("packages:sticky-variant", {"variants": "+allow-gcc"}):
s = Spec("sticky-variant %gcc").concretized()
assert s.satisfies("%gcc") and s.satisfies("+allow-gcc")
@pytest.mark.regression("41134")
@pytest.mark.only_clingo("Not backporting the fix to the old concretizer")
def test_default_preference_variant_different_type_does_not_error(self):
"""Tests that a different type for an existing variant in the 'all:' section of
packages.yaml doesn't fail with an error.
"""
with spack.config.override("packages:all", {"variants": "+foo"}):
s = Spec("pkg-a").concretized()
assert s.satisfies("foo=bar")

View File

@ -872,6 +872,8 @@ def test_skip_requirement_when_default_requirement_condition_cannot_be_met(
def test_requires_directive(concretize_scope, mock_packages):
compilers_yaml = pathlib.Path(concretize_scope) / "compilers.yaml"
# NOTE: target is omitted here so that the test works on aarch64, as well.
compilers_yaml.write_text(
"""
compilers::
@ -883,7 +885,6 @@ def test_requires_directive(concretize_scope, mock_packages):
f77: null
fc: null
operating_system: debian6
target: x86_64
modules: []
"""
)
@ -896,3 +897,69 @@ def test_requires_directive(concretize_scope, mock_packages):
# This package can only be compiled with clang
with pytest.raises(spack.error.SpackError, match="can only be compiled with Clang"):
Spec("requires_clang").concretized()
@pytest.mark.regression("42084")
def test_requiring_package_on_multiple_virtuals(concretize_scope, mock_packages):
update_packages_config(
"""
packages:
all:
providers:
scalapack: [netlib-scalapack]
blas:
require: intel-parallel-studio
lapack:
require: intel-parallel-studio
scalapack:
require: intel-parallel-studio
"""
)
s = Spec("dla-future").concretized()
assert s["blas"].name == "intel-parallel-studio"
assert s["lapack"].name == "intel-parallel-studio"
assert s["scalapack"].name == "intel-parallel-studio"
@pytest.mark.parametrize(
"spec_str,expected,not_expected",
[
(
"forward-multi-value +cuda cuda_arch=10 ^dependency-mv~cuda",
["cuda_arch=10", "^dependency-mv~cuda"],
["cuda_arch=11", "^dependency-mv cuda_arch=10", "^dependency-mv cuda_arch=11"],
),
(
"forward-multi-value +cuda cuda_arch=10 ^dependency-mv+cuda",
["cuda_arch=10", "^dependency-mv cuda_arch=10"],
["cuda_arch=11", "^dependency-mv cuda_arch=11"],
),
(
"forward-multi-value +cuda cuda_arch=11 ^dependency-mv+cuda",
["cuda_arch=11", "^dependency-mv cuda_arch=11"],
["cuda_arch=10", "^dependency-mv cuda_arch=10"],
),
(
"forward-multi-value +cuda cuda_arch=10,11 ^dependency-mv+cuda",
["cuda_arch=10,11", "^dependency-mv cuda_arch=10,11"],
[],
),
],
)
def test_forward_multi_valued_variant_using_requires(
spec_str, expected, not_expected, config, mock_packages
):
"""Tests that a package can forward multivalue variants to dependencies, using
`requires` directives of the form:
for _val in ("shared", "static"):
requires(f"^some-virtual-mv libs={_val}", when=f"libs={_val} ^some-virtual-mv")
"""
s = Spec(spec_str).concretized()
for constraint in expected:
assert s.satisfies(constraint)
for constraint in not_expected:
assert not s.satisfies(constraint)

View File

@ -1176,13 +1176,13 @@ def test_license_dir_config(mutable_config, mock_packages):
expected_dir = spack.paths.default_license_dir
assert spack.config.get("config:license_dir") == expected_dir
assert spack.package_base.PackageBase.global_license_dir == expected_dir
assert spack.repo.PATH.get_pkg_class("a").global_license_dir == expected_dir
assert spack.repo.PATH.get_pkg_class("pkg-a").global_license_dir == expected_dir
rel_path = os.path.join(os.path.sep, "foo", "bar", "baz")
spack.config.set("config:license_dir", rel_path)
assert spack.config.get("config:license_dir") == rel_path
assert spack.package_base.PackageBase.global_license_dir == rel_path
assert spack.repo.PATH.get_pkg_class("a").global_license_dir == rel_path
assert spack.repo.PATH.get_pkg_class("pkg-a").global_license_dir == rel_path
@pytest.mark.regression("22547")
@ -1239,11 +1239,11 @@ def test_user_config_path_is_default_when_env_var_is_empty(working_env):
assert os.path.expanduser("~%s.spack" % os.sep) == spack.paths._get_user_config_path()
def test_default_install_tree(monkeypatch):
def test_default_install_tree(monkeypatch, default_config):
s = spack.spec.Spec("nonexistent@x.y.z %none@a.b.c arch=foo-bar-baz")
monkeypatch.setattr(s, "dag_hash", lambda: "abc123")
projection = spack.config.get("config:install_tree:projections:all", scope="defaults")
assert s.format(projection) == "foo-bar-baz/none-a.b.c/nonexistent-x.y.z-abc123"
_, _, projections = spack.store.parse_install_tree(spack.config.get("config"))
assert s.format(projections["all"]) == "foo-bar-baz/none-a.b.c/nonexistent-x.y.z-abc123"
def test_local_config_can_be_disabled(working_env):

View File

@ -21,6 +21,7 @@
import py
import pytest
import archspec.cpu
import archspec.cpu.microarchitecture
import archspec.cpu.schema
@ -596,7 +597,7 @@ def mutable_mock_repo(mock_repo_path, request):
def mock_custom_repository(tmpdir, mutable_mock_repo):
"""Create a custom repository with a single package "c" and return its path."""
builder = spack.repo.MockRepositoryBuilder(tmpdir.mkdir("myrepo"))
builder.add_package("c")
builder.add_package("pkg-c")
return builder.root
@ -629,7 +630,7 @@ def platform_config():
spack.config.add_default_platform_scope(spack.platforms.real_host().name)
@pytest.fixture(scope="session")
@pytest.fixture
def default_config():
"""Isolates the default configuration from the user configs.
@ -708,14 +709,13 @@ def configuration_dir(tmpdir_factory, linux_os):
t.write(content)
compilers_yaml = test_config.join("compilers.yaml")
content = "".join(compilers_yaml.read()).format(linux_os)
content = "".join(compilers_yaml.read()).format(
linux_os=linux_os, target=str(archspec.cpu.host().family)
)
t = tmpdir.join("site", "compilers.yaml")
t.write(content)
yield tmpdir
# Once done, cleanup the directory
shutil.rmtree(str(tmpdir))
def _create_mock_configuration_scopes(configuration_dir):
"""Create the configuration scopes used in `config` and `mutable_config`."""
@ -1953,17 +1953,50 @@ def pytest_runtest_setup(item):
@pytest.fixture(scope="function")
def disable_parallel_buildcache_push(monkeypatch):
class MockPool:
def map(self, func, args):
return [func(a) for a in args]
"""Disable process pools in tests."""
monkeypatch.setattr(spack.cmd.buildcache, "_make_pool", spack.cmd.buildcache.NoPool)
def starmap(self, func, args):
return [func(*a) for a in args]
def __enter__(self):
return self
def create_test_repo(tmpdir, pkg_name_content_tuples):
repo_path = str(tmpdir)
repo_yaml = tmpdir.join("repo.yaml")
with open(str(repo_yaml), "w") as f:
f.write(
"""\
repo:
namespace: testcfgrequirements
"""
)
def __exit__(self, *args):
pass
packages_dir = tmpdir.join("packages")
for pkg_name, pkg_str in pkg_name_content_tuples:
pkg_dir = packages_dir.ensure(pkg_name, dir=True)
pkg_file = pkg_dir.join("package.py")
with open(str(pkg_file), "w") as f:
f.write(pkg_str)
monkeypatch.setattr(spack.cmd.buildcache, "_make_pool", MockPool)
return spack.repo.Repo(repo_path)
@pytest.fixture()
def compiler_factory():
"""Factory for a compiler dict, taking a spec and an OS as arguments."""
def _factory(*, spec, operating_system):
return {
"compiler": {
"spec": spec,
"operating_system": operating_system,
"paths": {"cc": "/path/to/cc", "cxx": "/path/to/cxx", "f77": None, "fc": None},
"modules": [],
"target": str(archspec.cpu.host().family),
}
}
return _factory
@pytest.fixture()
def host_architecture_str():
"""Returns the broad architecture family (x86_64, aarch64, etc.)"""
return str(archspec.cpu.host().family)

View File

@ -1,353 +1,41 @@
compilers:
- compiler:
spec: clang@3.3
operating_system: {0.name}{0.version}
spec: gcc@=4.8.0
operating_system: {linux_os.name}{linux_os.version}
paths:
cc: /path/to/gcc
cxx: /path/to/g++
f77: None
fc: None
modules: []
target: {target}
- compiler:
spec: gcc@=4.8.0
operating_system: redhat6
paths:
cc: /path/to/gcc
cxx: /path/to/g++
f77: None
fc: None
modules: []
target: {target}
- compiler:
spec: clang@=12.0.0
operating_system: {linux_os.name}{linux_os.version}
paths:
cc: /path/to/clang
cxx: /path/to/clang++
f77: None
fc: None
modules: 'None'
target: x86_64
modules: []
target: {target}
- compiler:
spec: gcc@4.5.0
operating_system: {0.name}{0.version}
spec: gcc@=10.2.1
operating_system: {linux_os.name}{linux_os.version}
paths:
cc: /path/to/gcc
cxx: /path/to/g++
f77: None
fc: None
modules: 'None'
target: x86_64
- compiler:
spec: gcc@4.5.0
operating_system: redhat6
paths:
cc: /path/to/gcc
cxx: /path/to/g++
f77: None
fc: None
modules: 'None'
target: x86_64
- compiler:
spec: clang@3.3
operating_system: CNL
paths:
cc: /path/to/clang
cxx: /path/to/clang++
f77: None
fc: None
modules: 'None'
- compiler:
spec: clang@3.3
operating_system: SuSE11
paths:
cc: /path/to/clang
cxx: /path/to/clang++
f77: None
fc: None
modules: 'None'
target: x86_64
- compiler:
spec: clang@3.3
operating_system: yosemite
paths:
cc: /path/to/clang
cxx: /path/to/clang++
f77: None
fc: None
modules: 'None'
target: x86_64
- compiler:
paths:
cc: /path/to/gcc
cxx: /path/to/g++
f77: /path/to/gfortran
fc: /path/to/gfortran
operating_system: CNL
spec: gcc@4.5.0
modules: 'None'
- compiler:
paths:
cc: /path/to/gcc
cxx: /path/to/g++
f77: /path/to/gfortran
fc: /path/to/gfortran
operating_system: SuSE11
spec: gcc@4.5.0
modules: 'None'
target: x86_64
- compiler:
paths:
cc: /path/to/gcc
cxx: /path/to/g++
f77: /path/to/gfortran
fc: /path/to/gfortran
operating_system: yosemite
spec: gcc@4.5.0
modules: 'None'
target: x86_64
- compiler:
paths:
cc: /path/to/gcc
cxx: /path/to/g++
f77: /path/to/gfortran
fc: /path/to/gfortran
operating_system: elcapitan
spec: gcc@4.5.0
modules: 'None'
target: x86_64
- compiler:
spec: clang@3.3
operating_system: elcapitan
paths:
cc: /path/to/clang
cxx: /path/to/clang++
f77: None
fc: None
modules: 'None'
target: x86_64
- compiler:
spec: gcc@4.7.2
operating_system: redhat6
paths:
cc: /path/to/gcc472
cxx: /path/to/g++472
f77: /path/to/gfortran472
fc: /path/to/gfortran472
flags:
cflags: -O0 -g
cxxflags: -O0 -g
fflags: -O0 -g
modules: 'None'
target: x86_64
- compiler:
spec: gcc@4.4.0
operating_system: redhat6
paths:
cc: /path/to/gcc440
cxx: /path/to/g++440
f77: /path/to/gfortran440
fc: /path/to/gfortran440
modules: 'None'
target: x86_64
- compiler:
spec: clang@3.5
operating_system: redhat6
paths:
cc: /path/to/clang35
cxx: /path/to/clang++35
f77: None
fc: None
flags:
cflags: -O3
cxxflags: -O3
modules: 'None'
target: x86_64
- compiler:
spec: clang@8.0.0
operating_system: redhat7
paths:
cc: /path/to/clang-8
cxx: /path/to/clang++-8
f77: /path/to/gfortran-9
fc: /path/to/gfortran-9
flags:
cflags: -O3
cxxflags: -O3
modules: 'None'
target: x86_64
- compiler:
spec: apple-clang@9.1.0
operating_system: elcapitan
paths:
cc: /path/to/clang
cxx: /path/to/clang++
f77: None
fc: None
modules: 'None'
target: x86_64
- compiler:
spec: gcc@10foo
operating_system: redhat6
paths:
cc: /path/to/gcc
cxx: /path/to/g++
f77: /path/to/gfortran
fc: /path/to/gfortran
modules: 'None'
target: x86_64
- compiler:
spec: gcc@4.4.0-special
operating_system: redhat6
paths:
cc: /path/to/gcc
cxx: /path/to/g++
f77: /path/to/gfortran
fc: /path/to/gfortran
modules: 'None'
target: x86_64
- compiler:
spec: clang@12.0.0
operating_system: {0.name}{0.version}
paths:
cc: /path/to/clang
cxx: /path/to/clang++
f77: None
fc: None
modules: 'None'
target: aarch64
- compiler:
spec: gcc@10.2.1
operating_system: {0.name}{0.version}
paths:
cc: /path/to/gcc
cxx: /path/to/g++
f77: None
fc: None
modules: 'None'
target: aarch64
- compiler:
spec: clang@12.0.0
operating_system: redhat6
paths:
cc: /path/to/clang
cxx: /path/to/clang++
f77: None
fc: None
modules: 'None'
target: aarch64
- compiler:
spec: gcc@10.2.1
operating_system: redhat6
paths:
cc: /path/to/gcc
cxx: /path/to/g++
f77: None
fc: None
modules: 'None'
target: aarch64
- compiler:
spec: gcc@10.1.0
operating_system: redhat6
paths:
cc: /path/to/gcc
cxx: /path/to/g++
f77: None
fc: None
modules: 'None'
target: aarch64
- compiler:
spec: gcc@11.1.0
operating_system: redhat6
paths:
cc: /path/to/gcc
cxx: /path/to/g++
f77: None
fc: None
flags:
cflags: -O0 -g
cxxflags: -O0 -g
fflags: -O0 -g
modules: 'None'
target: aarch64
- compiler:
spec: clang@12.2.0
operating_system: redhat6
paths:
cc: /path/to/clang35
cxx: /path/to/clang++35
f77: None
fc: None
flags:
cflags: -O3
cxxflags: -O3
modules: 'None'
target: aarch64
- compiler:
spec: gcc@10foo
operating_system: redhat6
paths:
cc: /path/to/gcc
cxx: /path/to/g++
f77: /path/to/gfortran
fc: /path/to/gfortran
modules: 'None'
target: aarch64
- compiler:
spec: clang@12.0.0
operating_system: {0.name}{0.version}
paths:
cc: /path/to/clang
cxx: /path/to/clang++
f77: None
fc: None
modules: 'None'
target: x86_64
- compiler:
spec: gcc@10.2.1
operating_system: {0.name}{0.version}
paths:
cc: /path/to/gcc
cxx: /path/to/g++
f77: None
fc: None
modules: 'None'
target: x86_64
- compiler:
spec: clang@12.0.0
operating_system: redhat6
paths:
cc: /path/to/clang
cxx: /path/to/clang++
f77: None
fc: None
modules: 'None'
target: x86_64
- compiler:
spec: gcc@10.2.1
operating_system: redhat6
paths:
cc: /path/to/gcc
cxx: /path/to/g++
f77: None
fc: None
modules: 'None'
target: x86_64
- compiler:
spec: gcc@10.1.0
operating_system: redhat6
paths:
cc: /path/to/gcc
cxx: /path/to/g++
f77: None
fc: None
modules: 'None'
target: x86_64
- compiler:
spec: gcc@11.1.0
operating_system: redhat6
paths:
cc: /path/to/gcc
cxx: /path/to/g++
f77: None
fc: None
flags:
cflags: -O0 -g
cxxflags: -O0 -g
fflags: -O0 -g
modules: 'None'
target: x86_64
- compiler:
spec: clang@12.2.0
operating_system: redhat6
paths:
cc: /path/to/clang35
cxx: /path/to/clang++35
f77: None
fc: None
flags:
cflags: -O3
cxxflags: -O3
modules: 'None'
target: x86_64
modules: []
target: {target}

View File

@ -1,14 +0,0 @@
# DEPRECATED: remove this in v0.20
# See `exclude.yaml` for the new syntax
enable:
- lmod
lmod:
core_compilers:
- 'clang@3.3'
hierarchy:
- mpi
blacklist:
- callpath
all:
autoload: direct

View File

@ -1,30 +0,0 @@
# DEPRECATED: remove this in v0.20
# See `alter_environment.yaml` for the new syntax
enable:
- lmod
lmod:
core_compilers:
- 'clang@3.3'
hierarchy:
- mpi
all:
autoload: none
filter:
environment_blacklist:
- CMAKE_PREFIX_PATH
environment:
set:
'{name}_ROOT': '{prefix}'
'platform=test target=x86_64':
environment:
set:
FOO: 'foo'
unset:
- BAR
'platform=test target=core2':
load:
- 'foo/bar'

View File

@ -1,12 +0,0 @@
# DEPRECATED: remove this in v0.20
# See `exclude.yaml` for the new syntax
enable:
- tcl
tcl:
whitelist:
- zmpi
blacklist:
- callpath
- mpi
all:
autoload: direct

View File

@ -1,25 +0,0 @@
# DEPRECATED: remove this in v0.20
# See `alter_environment.yaml` for the new syntax
enable:
- tcl
tcl:
all:
autoload: none
filter:
environment_blacklist:
- CMAKE_PREFIX_PATH
environment:
set:
'{name}_ROOT': '{prefix}'
'platform=test target=x86_64':
environment:
set:
FOO: 'foo'
OMPI_MCA_mpi_leave_pinned: '1'
unset:
- BAR
'platform=test target=core2':
load:
- 'foo/bar'

View File

@ -1,8 +0,0 @@
# DEPRECATED: remove this in v0.20
# See `exclude_implicits.yaml` for the new syntax
enable:
- tcl
tcl:
blacklist_implicits: true
all:
autoload: direct

View File

@ -4,7 +4,7 @@ tcl:
all:
autoload: none
filter:
environment_blacklist:
exclude_env_vars:
- CMAKE_PREFIX_PATH
environment:
set:

View File

@ -69,7 +69,7 @@ def test_spec_installed_upstream(
# a known installed spec should say that it's installed
with spack.repo.use_repositories(mock_custom_repository):
spec = spack.spec.Spec("c").concretized()
spec = spack.spec.Spec("pkg-c").concretized()
assert not spec.installed
assert not spec.installed_upstream
@ -813,7 +813,7 @@ def test_query_virtual_spec(database):
def test_failed_spec_path_error(database):
"""Ensure spec not concrete check is covered."""
s = spack.spec.Spec("a")
s = spack.spec.Spec("pkg-a")
with pytest.raises(AssertionError, match="concrete spec required"):
spack.store.STORE.failure_tracker.mark(s)
@ -828,7 +828,7 @@ def _is(self, spec):
# Pretend the spec has been failure locked
monkeypatch.setattr(spack.database.FailureTracker, "lock_taken", _is)
s = spack.spec.Spec("a").concretized()
s = spack.spec.Spec("pkg-a").concretized()
spack.store.STORE.failure_tracker.clear(s)
out = capfd.readouterr()[0]
assert "Retaining failure marking" in out
@ -846,7 +846,7 @@ def _is(self, spec):
# Ensure raise OSError when try to remove the non-existent marking
monkeypatch.setattr(spack.database.FailureTracker, "persistent_mark", _is)
s = default_mock_concretization("a")
s = spack.spec.Spec("pkg-a").concretized()
spack.store.STORE.failure_tracker.clear(s, force=True)
out = capfd.readouterr()[1]
assert "Removing failure marking despite lock" in out
@ -860,15 +860,16 @@ def test_mark_failed(default_mock_concretization, mutable_database, monkeypatch,
def _raise_exc(lock):
raise lk.LockTimeoutError("write", "/mock-lock", 1.234, 10)
# Ensure attempt to acquire write lock on the mark raises the exception
monkeypatch.setattr(lk.Lock, "acquire_write", _raise_exc)
with tmpdir.as_cwd():
s = default_mock_concretization("a")
s = spack.spec.Spec("pkg-a").concretized()
# Ensure attempt to acquire write lock on the mark raises the exception
monkeypatch.setattr(lk.Lock, "acquire_write", _raise_exc)
spack.store.STORE.failure_tracker.mark(s)
out = str(capsys.readouterr()[1])
assert "Unable to mark a as failed" in out
assert "Unable to mark pkg-a as failed" in out
spack.store.STORE.failure_tracker.clear_all()
@ -877,7 +878,7 @@ def _raise_exc(lock):
def test_prefix_failed(default_mock_concretization, mutable_database, monkeypatch):
"""Add coverage to failed operation."""
s = default_mock_concretization("a")
s = spack.spec.Spec("pkg-a").concretized()
# Confirm the spec is not already marked as failed
assert not spack.store.STORE.failure_tracker.has_failed(s)
@ -901,7 +902,7 @@ def test_prefix_write_lock_error(default_mock_concretization, mutable_database,
def _raise(db, spec):
raise lk.LockError("Mock lock error")
s = default_mock_concretization("a")
s = spack.spec.Spec("pkg-a").concretized()
# Ensure subsequent lock operations fail
monkeypatch.setattr(lk.Lock, "acquire_write", _raise)

View File

@ -30,7 +30,7 @@ def test_true_directives_exist(mock_packages):
assert cls.dependencies
assert spack.spec.Spec() in cls.dependencies["extendee"]
assert spack.spec.Spec() in cls.dependencies["b"]
assert spack.spec.Spec() in cls.dependencies["pkg-b"]
assert cls.resources
assert spack.spec.Spec() in cls.resources
@ -43,7 +43,7 @@ def test_constraints_from_context(mock_packages):
pkg_cls = spack.repo.PATH.get_pkg_class("with-constraint-met")
assert pkg_cls.dependencies
assert spack.spec.Spec("@1.0") in pkg_cls.dependencies["b"]
assert spack.spec.Spec("@1.0") in pkg_cls.dependencies["pkg-b"]
assert pkg_cls.conflicts
assert (spack.spec.Spec("+foo@1.0"), None) in pkg_cls.conflicts["%gcc"]
@ -54,7 +54,7 @@ def test_constraints_from_context_are_merged(mock_packages):
pkg_cls = spack.repo.PATH.get_pkg_class("with-constraint-met")
assert pkg_cls.dependencies
assert spack.spec.Spec("@0.14:15 ^b@3.8:4.0") in pkg_cls.dependencies["c"]
assert spack.spec.Spec("@0.14:15 ^pkg-b@3.8:4.0") in pkg_cls.dependencies["pkg-c"]
@pytest.mark.regression("27754")
@ -68,7 +68,7 @@ def test_extends_spec(config, mock_packages):
@pytest.mark.regression("34368")
def test_error_on_anonymous_dependency(config, mock_packages):
pkg = spack.repo.PATH.get_pkg_class("a")
pkg = spack.repo.PATH.get_pkg_class("pkg-a")
with pytest.raises(spack.directives.DependencyError):
spack.directives._depends_on(pkg, "@4.5")

View File

@ -377,10 +377,10 @@ def test_can_add_specs_to_environment_without_specs_attribute(tmp_path, mock_pac
"""
)
env = ev.Environment(tmp_path)
env.add("a")
env.add("pkg-a")
assert len(env.user_specs) == 1
assert env.manifest.pristine_yaml_content["spack"]["specs"] == ["a"]
assert env.manifest.pristine_yaml_content["spack"]["specs"] == ["pkg-a"]
@pytest.mark.parametrize(
@ -578,7 +578,7 @@ def test_conflicts_with_packages_that_are_not_dependencies(
spack:
specs:
- {spec_str}
- b
- pkg-b
concretizer:
unify: true
"""
@ -695,7 +695,7 @@ def test_removing_spec_from_manifest_with_exact_duplicates(
@pytest.mark.regression("35298")
@pytest.mark.only_clingo("Propagation not supported in the original concretizer")
def test_variant_propagation_with_unify_false(tmp_path, mock_packages):
def test_variant_propagation_with_unify_false(tmp_path, mock_packages, config):
"""Spack distributes concretizations to different processes, when unify:false is selected and
the number of roots is 2 or more. When that happens, the specs to be concretized need to be
properly reconstructed on the worker process, if variant propagation was requested.
@ -706,7 +706,7 @@ def test_variant_propagation_with_unify_false(tmp_path, mock_packages):
spack:
specs:
- parent-foo ++foo
- c
- pkg-c
concretizer:
unify: false
"""
@ -778,3 +778,32 @@ def test_env_with_include_def_missing(mutable_mock_env_path, mock_packages):
with e:
with pytest.raises(UndefinedReferenceError, match=r"which does not appear"):
e.concretize()
@pytest.mark.regression("41292")
def test_deconcretize_then_concretize_does_not_error(mutable_mock_env_path, mock_packages):
"""Tests that, after having deconcretized a spec, we can reconcretize an environment which
has 2 or more user specs mapping to the same concrete spec.
"""
mutable_mock_env_path.mkdir()
spack_yaml = mutable_mock_env_path / ev.manifest_name
spack_yaml.write_text(
"""spack:
specs:
# These two specs concretize to the same hash
- pkg-c
- pkg-c@1.0
# Spec used to trigger the bug
- pkg-a
concretizer:
unify: true
"""
)
e = ev.Environment(mutable_mock_env_path)
with e:
e.concretize()
e.deconcretize(spack.spec.Spec("pkg-a"), concrete=False)
e.concretize()
assert len(e.concrete_roots()) == 3
all_root_hashes = {x.dag_hash() for x in e.concrete_roots()}
assert len(all_root_hashes) == 2

View File

@ -12,10 +12,12 @@
import llnl.util.filesystem as fs
import spack.error
import spack.mirror
import spack.patch
import spack.repo
import spack.store
import spack.util.spack_json as sjson
from spack import binary_distribution
from spack.package_base import (
InstallError,
PackageBase,
@ -118,61 +120,28 @@ def remove_prefix(self):
self.wrapped_rm_prefix()
class MockStage:
def __init__(self, wrapped_stage):
self.wrapped_stage = wrapped_stage
self.test_destroyed = False
def __enter__(self):
self.create()
return self
def __exit__(self, exc_type, exc_val, exc_tb):
if exc_type is None:
self.destroy()
def destroy(self):
self.test_destroyed = True
self.wrapped_stage.destroy()
def create(self):
self.wrapped_stage.create()
def __getattr__(self, attr):
if attr == "wrapped_stage":
# This attribute may not be defined at some point during unpickling
raise AttributeError()
return getattr(self.wrapped_stage, attr)
def test_partial_install_delete_prefix_and_stage(install_mockery, mock_fetch, working_env):
s = Spec("canfail").concretized()
instance_rm_prefix = s.package.remove_prefix
try:
s.package.remove_prefix = mock_remove_prefix
with pytest.raises(MockInstallError):
s.package.do_install()
assert os.path.isdir(s.package.prefix)
rm_prefix_checker = RemovePrefixChecker(instance_rm_prefix)
s.package.remove_prefix = rm_prefix_checker.remove_prefix
s.package.remove_prefix = mock_remove_prefix
with pytest.raises(MockInstallError):
s.package.do_install()
assert os.path.isdir(s.package.prefix)
rm_prefix_checker = RemovePrefixChecker(instance_rm_prefix)
s.package.remove_prefix = rm_prefix_checker.remove_prefix
# must clear failure markings for the package before re-installing it
spack.store.STORE.failure_tracker.clear(s, True)
# must clear failure markings for the package before re-installing it
spack.store.STORE.failure_tracker.clear(s, True)
s.package.set_install_succeed()
s.package.stage = MockStage(s.package.stage)
s.package.do_install(restage=True)
assert rm_prefix_checker.removed
assert s.package.stage.test_destroyed
assert s.package.spec.installed
finally:
s.package.remove_prefix = instance_rm_prefix
s.package.set_install_succeed()
s.package.do_install(restage=True)
assert rm_prefix_checker.removed
assert s.package.spec.installed
@pytest.mark.not_on_windows("Fails spuriously on Windows")
@pytest.mark.disable_clean_stage_check
def test_failing_overwrite_install_should_keep_previous_installation(
mock_fetch, install_mockery, working_env
@ -357,10 +326,8 @@ def test_partial_install_keep_prefix(install_mockery, mock_fetch, monkeypatch, w
spack.store.STORE.failure_tracker.clear(s, True)
s.package.set_install_succeed()
s.package.stage = MockStage(s.package.stage)
s.package.do_install(keep_prefix=True)
assert s.package.spec.installed
assert not s.package.stage.test_destroyed
def test_second_install_no_overwrite_first(install_mockery, mock_fetch, monkeypatch):
@ -644,3 +611,48 @@ def test_empty_install_sanity_check_prefix(
spec = Spec("failing-empty-install").concretized()
with pytest.raises(spack.build_environment.ChildError, match="Nothing was installed"):
spec.package.do_install()
def test_install_from_binary_with_missing_patch_succeeds(
temporary_store: spack.store.Store, mutable_config, tmp_path, mock_packages
):
"""If a patch is missing in the local package repository, but was present when building and
pushing the package to a binary cache, installation from that binary cache shouldn't error out
because of the missing patch."""
# Create a spec s with non-existing patches
s = Spec("trivial-install-test-package").concretized()
patches = ["a" * 64]
s_dict = s.to_dict()
s_dict["spec"]["nodes"][0]["patches"] = patches
s_dict["spec"]["nodes"][0]["parameters"]["patches"] = patches
s = Spec.from_dict(s_dict)
# Create an install dir for it
os.makedirs(os.path.join(s.prefix, ".spack"))
with open(os.path.join(s.prefix, ".spack", "spec.json"), "w") as f:
s.to_json(f)
# And register it in the database
temporary_store.db.add(s, directory_layout=temporary_store.layout, explicit=True)
# Push it to a binary cache
build_cache = tmp_path / "my_build_cache"
binary_distribution.push_or_raise(
s,
build_cache.as_uri(),
binary_distribution.PushOptions(unsigned=True, regenerate_index=True),
)
# Now re-install it.
s.package.do_uninstall()
assert not temporary_store.db.query_local_by_spec_hash(s.dag_hash())
# Source install: fails, we don't have the patch.
with pytest.raises(spack.error.SpecError, match="Couldn't find patch for package"):
s.package.do_install()
# Binary install: succeeds, we don't need the patch.
spack.mirror.add(spack.mirror.Mirror.from_local_path(str(build_cache)))
s.package.do_install(package_cache_only=True, dependencies_cache_only=True, unsigned=True)
assert temporary_store.db.query_local_by_spec_hash(s.dag_hash())

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