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docker-ent
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develop-20
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2
.github/workflows/audit.yaml
vendored
2
.github/workflows/audit.yaml
vendored
@@ -23,7 +23,7 @@ jobs:
|
||||
operating_system: ["ubuntu-latest", "macos-latest"]
|
||||
steps:
|
||||
- uses: actions/checkout@b4ffde65f46336ab88eb53be808477a3936bae11 # @v2
|
||||
- uses: actions/setup-python@65d7f2d534ac1bc67fcd62888c5f4f3d2cb2b236 # @v2
|
||||
- uses: actions/setup-python@0a5c61591373683505ea898e09a3ea4f39ef2b9c # @v2
|
||||
with:
|
||||
python-version: ${{inputs.python_version}}
|
||||
- name: Install Python packages
|
||||
|
2
.github/workflows/bootstrap.yml
vendored
2
.github/workflows/bootstrap.yml
vendored
@@ -159,7 +159,7 @@ jobs:
|
||||
brew install cmake bison@2.7 tree
|
||||
- name: Checkout
|
||||
uses: actions/checkout@b4ffde65f46336ab88eb53be808477a3936bae11
|
||||
- uses: actions/setup-python@65d7f2d534ac1bc67fcd62888c5f4f3d2cb2b236 # @v2
|
||||
- uses: actions/setup-python@0a5c61591373683505ea898e09a3ea4f39ef2b9c # @v2
|
||||
with:
|
||||
python-version: "3.12"
|
||||
- name: Bootstrap clingo
|
||||
|
4
.github/workflows/build-containers.yml
vendored
4
.github/workflows/build-containers.yml
vendored
@@ -57,7 +57,7 @@ jobs:
|
||||
- name: Checkout
|
||||
uses: actions/checkout@b4ffde65f46336ab88eb53be808477a3936bae11 # @v2
|
||||
|
||||
- uses: docker/metadata-action@96383f45573cb7f253c731d3b3ab81c87ef81934
|
||||
- uses: docker/metadata-action@31cebacef4805868f9ce9a0cb03ee36c32df2ac4
|
||||
id: docker_meta
|
||||
with:
|
||||
images: |
|
||||
@@ -113,7 +113,7 @@ jobs:
|
||||
password: ${{ secrets.DOCKERHUB_TOKEN }}
|
||||
|
||||
- name: Build & Deploy ${{ matrix.dockerfile[0] }}
|
||||
uses: docker/build-push-action@0565240e2d4ab88bba5387d719585280857ece09
|
||||
uses: docker/build-push-action@4a13e500e55cf31b7a5d59a38ab2040ab0f42f56
|
||||
with:
|
||||
context: dockerfiles/${{ matrix.dockerfile[0] }}
|
||||
platforms: ${{ matrix.dockerfile[1] }}
|
||||
|
2
.github/workflows/nightly-win-builds.yml
vendored
2
.github/workflows/nightly-win-builds.yml
vendored
@@ -17,7 +17,7 @@ jobs:
|
||||
- uses: actions/checkout@b4ffde65f46336ab88eb53be808477a3936bae11
|
||||
with:
|
||||
fetch-depth: 0
|
||||
- uses: actions/setup-python@65d7f2d534ac1bc67fcd62888c5f4f3d2cb2b236
|
||||
- uses: actions/setup-python@0a5c61591373683505ea898e09a3ea4f39ef2b9c
|
||||
with:
|
||||
python-version: 3.9
|
||||
- name: Install Python packages
|
||||
|
6
.github/workflows/style/requirements.txt
vendored
6
.github/workflows/style/requirements.txt
vendored
@@ -1,7 +1,7 @@
|
||||
black==23.10.1
|
||||
black==23.11.0
|
||||
clingo==5.6.2
|
||||
flake8==6.1.0
|
||||
isort==5.12.0
|
||||
mypy==1.6.1
|
||||
mypy==1.7.1
|
||||
types-six==1.16.21.9
|
||||
vermin==1.5.2
|
||||
vermin==1.6.0
|
||||
|
10
.github/workflows/unit_tests.yaml
vendored
10
.github/workflows/unit_tests.yaml
vendored
@@ -54,7 +54,7 @@ jobs:
|
||||
- uses: actions/checkout@b4ffde65f46336ab88eb53be808477a3936bae11 # @v2
|
||||
with:
|
||||
fetch-depth: 0
|
||||
- uses: actions/setup-python@65d7f2d534ac1bc67fcd62888c5f4f3d2cb2b236 # @v2
|
||||
- uses: actions/setup-python@0a5c61591373683505ea898e09a3ea4f39ef2b9c # @v2
|
||||
with:
|
||||
python-version: ${{ matrix.python-version }}
|
||||
- name: Install System packages
|
||||
@@ -101,7 +101,7 @@ jobs:
|
||||
- uses: actions/checkout@b4ffde65f46336ab88eb53be808477a3936bae11 # @v2
|
||||
with:
|
||||
fetch-depth: 0
|
||||
- uses: actions/setup-python@65d7f2d534ac1bc67fcd62888c5f4f3d2cb2b236 # @v2
|
||||
- uses: actions/setup-python@0a5c61591373683505ea898e09a3ea4f39ef2b9c # @v2
|
||||
with:
|
||||
python-version: '3.11'
|
||||
- name: Install System packages
|
||||
@@ -159,7 +159,7 @@ jobs:
|
||||
- uses: actions/checkout@b4ffde65f46336ab88eb53be808477a3936bae11 # @v2
|
||||
with:
|
||||
fetch-depth: 0
|
||||
- uses: actions/setup-python@65d7f2d534ac1bc67fcd62888c5f4f3d2cb2b236 # @v2
|
||||
- uses: actions/setup-python@0a5c61591373683505ea898e09a3ea4f39ef2b9c # @v2
|
||||
with:
|
||||
python-version: '3.11'
|
||||
- name: Install System packages
|
||||
@@ -194,7 +194,7 @@ jobs:
|
||||
- uses: actions/checkout@b4ffde65f46336ab88eb53be808477a3936bae11 # @v2
|
||||
with:
|
||||
fetch-depth: 0
|
||||
- uses: actions/setup-python@65d7f2d534ac1bc67fcd62888c5f4f3d2cb2b236 # @v2
|
||||
- uses: actions/setup-python@0a5c61591373683505ea898e09a3ea4f39ef2b9c # @v2
|
||||
with:
|
||||
python-version: ${{ matrix.python-version }}
|
||||
- name: Install Python packages
|
||||
@@ -215,7 +215,7 @@ jobs:
|
||||
$(which spack) bootstrap disable spack-install
|
||||
$(which spack) solve zlib
|
||||
common_args=(--dist loadfile --tx '4*popen//python=./bin/spack-tmpconfig python -u ./bin/spack python' -x)
|
||||
$(which spack) unit-test --cov --cov-config=pyproject.toml --cov-report=xml:coverage.xml "${common_args[@]}"
|
||||
$(which spack) unit-test --verbose --cov --cov-config=pyproject.toml --cov-report=xml:coverage.xml "${common_args[@]}"
|
||||
- uses: codecov/codecov-action@eaaf4bedf32dbdc6b720b63067d99c4d77d6047d
|
||||
with:
|
||||
flags: unittests,macos
|
||||
|
4
.github/workflows/valid-style.yml
vendored
4
.github/workflows/valid-style.yml
vendored
@@ -19,7 +19,7 @@ jobs:
|
||||
runs-on: ubuntu-latest
|
||||
steps:
|
||||
- uses: actions/checkout@b4ffde65f46336ab88eb53be808477a3936bae11
|
||||
- uses: actions/setup-python@65d7f2d534ac1bc67fcd62888c5f4f3d2cb2b236
|
||||
- uses: actions/setup-python@0a5c61591373683505ea898e09a3ea4f39ef2b9c
|
||||
with:
|
||||
python-version: '3.11'
|
||||
cache: 'pip'
|
||||
@@ -38,7 +38,7 @@ jobs:
|
||||
- uses: actions/checkout@b4ffde65f46336ab88eb53be808477a3936bae11
|
||||
with:
|
||||
fetch-depth: 0
|
||||
- uses: actions/setup-python@65d7f2d534ac1bc67fcd62888c5f4f3d2cb2b236
|
||||
- uses: actions/setup-python@0a5c61591373683505ea898e09a3ea4f39ef2b9c
|
||||
with:
|
||||
python-version: '3.11'
|
||||
cache: 'pip'
|
||||
|
6
.github/workflows/windows_python.yml
vendored
6
.github/workflows/windows_python.yml
vendored
@@ -18,7 +18,7 @@ jobs:
|
||||
- uses: actions/checkout@b4ffde65f46336ab88eb53be808477a3936bae11
|
||||
with:
|
||||
fetch-depth: 0
|
||||
- uses: actions/setup-python@65d7f2d534ac1bc67fcd62888c5f4f3d2cb2b236
|
||||
- uses: actions/setup-python@0a5c61591373683505ea898e09a3ea4f39ef2b9c
|
||||
with:
|
||||
python-version: 3.9
|
||||
- name: Install Python packages
|
||||
@@ -42,7 +42,7 @@ jobs:
|
||||
- uses: actions/checkout@b4ffde65f46336ab88eb53be808477a3936bae11
|
||||
with:
|
||||
fetch-depth: 0
|
||||
- uses: actions/setup-python@65d7f2d534ac1bc67fcd62888c5f4f3d2cb2b236
|
||||
- uses: actions/setup-python@0a5c61591373683505ea898e09a3ea4f39ef2b9c
|
||||
with:
|
||||
python-version: 3.9
|
||||
- name: Install Python packages
|
||||
@@ -66,7 +66,7 @@ jobs:
|
||||
- uses: actions/checkout@b4ffde65f46336ab88eb53be808477a3936bae11
|
||||
with:
|
||||
fetch-depth: 0
|
||||
- uses: actions/setup-python@65d7f2d534ac1bc67fcd62888c5f4f3d2cb2b236
|
||||
- uses: actions/setup-python@0a5c61591373683505ea898e09a3ea4f39ef2b9c
|
||||
with:
|
||||
python-version: 3.9
|
||||
- name: Install Python packages
|
||||
|
287
CHANGELOG.md
287
CHANGELOG.md
@@ -1,3 +1,290 @@
|
||||
# v0.21.0 (2023-11-11)
|
||||
|
||||
`v0.21.0` is a major feature release.
|
||||
|
||||
## Features in this release
|
||||
|
||||
1. **Better error messages with condition chaining**
|
||||
|
||||
In v0.18, we added better error messages that could tell you what problem happened,
|
||||
but they couldn't tell you *why* it happened. `0.21` adds *condition chaining* to the
|
||||
solver, and Spack can now trace back through the conditions that led to an error and
|
||||
build a tree of causes potential causes and where they came from. For example:
|
||||
|
||||
```console
|
||||
$ spack solve hdf5 ^cmake@3.0.1
|
||||
==> Error: concretization failed for the following reasons:
|
||||
|
||||
1. Cannot satisfy 'cmake@3.0.1'
|
||||
2. Cannot satisfy 'cmake@3.0.1'
|
||||
required because hdf5 ^cmake@3.0.1 requested from CLI
|
||||
3. Cannot satisfy 'cmake@3.18:' and 'cmake@3.0.1
|
||||
required because hdf5 ^cmake@3.0.1 requested from CLI
|
||||
required because hdf5 depends on cmake@3.18: when @1.13:
|
||||
required because hdf5 ^cmake@3.0.1 requested from CLI
|
||||
4. Cannot satisfy 'cmake@3.12:' and 'cmake@3.0.1
|
||||
required because hdf5 depends on cmake@3.12:
|
||||
required because hdf5 ^cmake@3.0.1 requested from CLI
|
||||
required because hdf5 ^cmake@3.0.1 requested from CLI
|
||||
```
|
||||
|
||||
More details in #40173.
|
||||
|
||||
2. **OCI build caches**
|
||||
|
||||
You can now use an arbitrary [OCI](https://opencontainers.org) registry as a build
|
||||
cache:
|
||||
|
||||
```console
|
||||
$ spack mirror add my_registry oci://user/image # Dockerhub
|
||||
$ spack mirror add my_registry oci://ghcr.io/haampie/spack-test # GHCR
|
||||
$ spack mirror set --push --oci-username ... --oci-password ... my_registry # set login creds
|
||||
$ spack buildcache push my_registry [specs...]
|
||||
```
|
||||
|
||||
And you can optionally add a base image to get *runnable* images:
|
||||
|
||||
```console
|
||||
$ spack buildcache push --base-image ubuntu:23.04 my_registry python
|
||||
Pushed ... as [image]:python-3.11.2-65txfcpqbmpawclvtasuog4yzmxwaoia.spack
|
||||
|
||||
$ docker run --rm -it [image]:python-3.11.2-65txfcpqbmpawclvtasuog4yzmxwaoia.spack
|
||||
```
|
||||
|
||||
This creates a container image from the Spack installations on the host system,
|
||||
without the need to run `spack install` from a `Dockerfile` or `sif` file. It also
|
||||
addresses the inconvenience of losing binaries of dependencies when `RUN spack
|
||||
install` fails inside `docker build`.
|
||||
|
||||
Further, the container image layers and build cache tarballs are the same files. This
|
||||
means that `spack install` and `docker pull` use the exact same underlying binaries.
|
||||
If you previously used `spack install` inside of `docker build`, this feature helps
|
||||
you save storage by a factor two.
|
||||
|
||||
More details in #38358.
|
||||
|
||||
3. **Multiple versions of build dependencies**
|
||||
|
||||
Increasingly, complex package builds require multiple versions of some build
|
||||
dependencies. For example, Python packages frequently require very specific versions
|
||||
of `setuptools`, `cython`, and sometimes different physics packages require different
|
||||
versions of Python to build. The concretizer enforced that every solve was *unified*,
|
||||
i.e., that there only be one version of every package. The concretizer now supports
|
||||
"duplicate" nodes for *build dependencies*, but enforces unification through
|
||||
transitive link and run dependencies. This will allow it to better resolve complex
|
||||
dependency graphs in ecosystems like Python, and it also gets us very close to
|
||||
modeling compilers as proper dependencies.
|
||||
|
||||
This change required a major overhaul of the concretizer, as well as a number of
|
||||
performance optimizations. See #38447, #39621.
|
||||
|
||||
4. **Cherry-picking virtual dependencies**
|
||||
|
||||
You can now select only a subset of virtual dependencies from a spec that may provide
|
||||
more. For example, if you want `mpich` to be your `mpi` provider, you can be explicit
|
||||
by writing:
|
||||
|
||||
```
|
||||
hdf5 ^[virtuals=mpi] mpich
|
||||
```
|
||||
|
||||
Or, if you want to use, e.g., `intel-parallel-studio` for `blas` along with an external
|
||||
`lapack` like `openblas`, you could write:
|
||||
|
||||
```
|
||||
strumpack ^[virtuals=mpi] intel-parallel-studio+mkl ^[virtuals=lapack] openblas
|
||||
```
|
||||
|
||||
The `virtuals=mpi` is an edge attribute, and dependency edges in Spack graphs now
|
||||
track which virtuals they satisfied. More details in #17229 and #35322.
|
||||
|
||||
Note for packaging: in Spack 0.21 `spec.satisfies("^virtual")` is true if and only if
|
||||
the package specifies `depends_on("virtual")`. This is different from Spack 0.20,
|
||||
where depending on a provider implied depending on the virtual provided. See #41002
|
||||
for an example where `^mkl` was being used to test for several `mkl` providers in a
|
||||
package that did not depend on `mkl`.
|
||||
|
||||
5. **License directive**
|
||||
|
||||
Spack packages can now have license metadata, with the new `license()` directive:
|
||||
|
||||
```python
|
||||
license("Apache-2.0")
|
||||
```
|
||||
|
||||
Licenses use [SPDX identifiers](https://spdx.org/licenses), and you can use SPDX
|
||||
expressions to combine them:
|
||||
|
||||
```python
|
||||
license("Apache-2.0 OR MIT")
|
||||
```
|
||||
|
||||
Like other directives in Spack, it's conditional, so you can handle complex cases like
|
||||
Spack itself:
|
||||
|
||||
```python
|
||||
license("LGPL-2.1", when="@:0.11")
|
||||
license("Apache-2.0 OR MIT", when="@0.12:")
|
||||
```
|
||||
|
||||
More details in #39346, #40598.
|
||||
|
||||
6. **`spack deconcretize` command**
|
||||
|
||||
We are getting close to having a `spack update` command for environments, but we're
|
||||
not quite there yet. This is the next best thing. `spack deconcretize` gives you
|
||||
control over what you want to update in an already concrete environment. If you have
|
||||
an environment built with, say, `meson`, and you want to update your `meson` version,
|
||||
you can run:
|
||||
|
||||
```console
|
||||
spack deconcretize meson
|
||||
```
|
||||
|
||||
and have everything that depends on `meson` rebuilt the next time you run `spack
|
||||
concretize`. In a future Spack version, we'll handle all of this in a single command,
|
||||
but for now you can use this to drop bits of your lockfile and resolve your
|
||||
dependencies again. More in #38803.
|
||||
|
||||
7. **UI Improvements**
|
||||
|
||||
The venerable `spack info` command was looking shabby compared to the rest of Spack's
|
||||
UI, so we reworked it to have a bit more flair. `spack info` now makes much better
|
||||
use of terminal space and shows variants, their values, and their descriptions much
|
||||
more clearly. Conditional variants are grouped separately so you can more easily
|
||||
understand how packages are structured. More in #40998.
|
||||
|
||||
`spack checksum` now allows you to filter versions from your editor, or by version
|
||||
range. It also notifies you about potential download URL changes. See #40403.
|
||||
|
||||
8. **Environments can include definitions**
|
||||
|
||||
Spack did not previously support using `include:` with The
|
||||
[definitions](https://spack.readthedocs.io/en/latest/environments.html#spec-list-references)
|
||||
section of an environment, but now it does. You can use this to curate lists of specs
|
||||
and more easily reuse them across environments. See #33960.
|
||||
|
||||
9. **Aliases**
|
||||
|
||||
You can now add aliases to Spack commands in `config.yaml`, e.g. this might enshrine
|
||||
your favorite args to `spack find` as `spack f`:
|
||||
|
||||
```yaml
|
||||
config:
|
||||
aliases:
|
||||
f: find -lv
|
||||
```
|
||||
|
||||
See #17229.
|
||||
|
||||
10. **Improved autoloading of modules**
|
||||
|
||||
Spack 0.20 was the first release to enable autoloading of direct dependencies in
|
||||
module files.
|
||||
|
||||
The downside of this was that `module avail` and `module load` tab completion would
|
||||
show users too many modules to choose from, and many users disabled generating
|
||||
modules for dependencies through `exclude_implicits: true`. Further, it was
|
||||
necessary to keep hashes in module names to avoid file name clashes.
|
||||
|
||||
In this release, you can start using `hide_implicits: true` instead, which exposes
|
||||
only explicitly installed packages to the user, while still autoloading
|
||||
dependencies. On top of that, you can safely use `hash_length: 0`, as this config
|
||||
now only applies to the modules exposed to the user -- you don't have to worry about
|
||||
file name clashes for hidden dependencies.
|
||||
|
||||
Note: for `tcl` this feature requires Modules 4.7 or higher
|
||||
|
||||
11. **Updated container labeling**
|
||||
|
||||
Nightly Docker images from the `develop` branch will now be tagged as `:develop` and
|
||||
`:nightly`. The `:latest` tag is no longer associated with `:develop`, but with the
|
||||
latest stable release. Releases will be tagged with `:{major}`, `:{major}.{minor}`
|
||||
and `:{major}.{minor}.{patch}`. `ubuntu:18.04` has also been removed from the list of
|
||||
generated Docker images, as it is no longer supported. See #40593.
|
||||
|
||||
## Other new commands and directives
|
||||
|
||||
* `spack env activate` without arguments now loads a `default` environment that you do
|
||||
not have to create (#40756).
|
||||
* `spack find -H` / `--hashes`: a new shortcut for piping `spack find` output to
|
||||
other commands (#38663)
|
||||
* Add `spack checksum --verify`, fix `--add` (#38458)
|
||||
* New `default_args` context manager factors out common args for directives (#39964)
|
||||
* `spack compiler find --[no]-mixed-toolchain` lets you easily mix `clang` and
|
||||
`gfortran` on Linux (#40902)
|
||||
|
||||
## Performance improvements
|
||||
|
||||
* `spack external find` execution is now much faster (#39843)
|
||||
* `spack location -i` now much faster on success (#40898)
|
||||
* Drop redundant rpaths post install (#38976)
|
||||
* ASP-based solver: avoid cycles in clingo using hidden directive (#40720)
|
||||
* Fix multiple quadratic complexity issues in environments (#38771)
|
||||
|
||||
## Other new features of note
|
||||
|
||||
* archspec: update to v0.2.2, support for Sapphire Rapids, Power10, Neoverse V2 (#40917)
|
||||
* Propagate variants across nodes that don't have that variant (#38512)
|
||||
* Implement fish completion (#29549)
|
||||
* Can now distinguish between source/binary mirror; don't ping mirror.spack.io as much (#34523)
|
||||
* Improve status reporting on install (add [n/total] display) (#37903)
|
||||
|
||||
## Windows
|
||||
|
||||
This release has the best Windows support of any Spack release yet, with numerous
|
||||
improvements and much larger swaths of tests passing:
|
||||
|
||||
* MSVC and SDK improvements (#37711, #37930, #38500, #39823, #39180)
|
||||
* Windows external finding: update default paths; treat .bat as executable on Windows (#39850)
|
||||
* Windows decompression: fix removal of intermediate file (#38958)
|
||||
* Windows: executable/path handling (#37762)
|
||||
* Windows build systems: use ninja and enable tests (#33589)
|
||||
* Windows testing (#36970, #36972, #36973, #36840, #36977, #36792, #36834, #34696, #36971)
|
||||
* Windows PowerShell support (#39118, #37951)
|
||||
* Windows symlinking and libraries (#39933, #38599, #34701, #38578, #34701)
|
||||
|
||||
## Notable refactors
|
||||
* User-specified flags take precedence over others in Spack compiler wrappers (#37376)
|
||||
* Improve setup of build, run, and test environments (#35737, #40916)
|
||||
* `make` is no longer a required system dependency of Spack (#40380)
|
||||
* Support Python 3.12 (#40404, #40155, #40153)
|
||||
* docs: Replace package list with packages.spack.io (#40251)
|
||||
* Drop Python 2 constructs in Spack (#38720, #38718, #38703)
|
||||
|
||||
## Binary cache and stack updates
|
||||
* e4s arm stack: duplicate and target neoverse v1 (#40369)
|
||||
* Add macOS ML CI stacks (#36586)
|
||||
* E4S Cray CI Stack (#37837)
|
||||
* e4s cray: expand spec list (#38947)
|
||||
* e4s cray sles ci: expand spec list (#39081)
|
||||
|
||||
## Removals, deprecations, and syntax changes
|
||||
* ASP: targets, compilers and providers soft-preferences are only global (#31261)
|
||||
* Parser: fix ambiguity with whitespace in version ranges (#40344)
|
||||
* Module file generation is disabled by default; you'll need to enable it to use it (#37258)
|
||||
* Remove deprecated "extra_instructions" option for containers (#40365)
|
||||
* Stand-alone test feature deprecation postponed to v0.22 (#40600)
|
||||
* buildcache push: make `--allow-root` the default and deprecate the option (#38878)
|
||||
|
||||
## Notable Bugfixes
|
||||
* Bugfix: propagation of multivalued variants (#39833)
|
||||
* Allow `/` in git versions (#39398)
|
||||
* Fetch & patch: actually acquire stage lock, and many more issues (#38903)
|
||||
* Environment/depfile: better escaping of targets with Git versions (#37560)
|
||||
* Prevent "spack external find" to error out on wrong permissions (#38755)
|
||||
* lmod: allow core compiler to be specified with a version range (#37789)
|
||||
|
||||
## Spack community stats
|
||||
|
||||
* 7,469 total packages, 303 new since `v0.20.0`
|
||||
* 150 new Python packages
|
||||
* 34 new R packages
|
||||
* 353 people contributed to this release
|
||||
* 336 committers to packages
|
||||
* 65 committers to core
|
||||
|
||||
|
||||
# v0.20.3 (2023-10-31)
|
||||
|
||||
## Bugfixes
|
||||
|
@@ -66,10 +66,11 @@ Resources:
|
||||
* **Matrix space**: [#spack-space:matrix.org](https://matrix.to/#/#spack-space:matrix.org):
|
||||
[bridged](https://github.com/matrix-org/matrix-appservice-slack#matrix-appservice-slack) to Slack.
|
||||
* [**Github Discussions**](https://github.com/spack/spack/discussions):
|
||||
not just for discussions, but also Q&A.
|
||||
* **Mailing list**: [groups.google.com/d/forum/spack](https://groups.google.com/d/forum/spack)
|
||||
for Q&A and discussions. Note the pinned discussions for announcements.
|
||||
* **Twitter**: [@spackpm](https://twitter.com/spackpm). Be sure to
|
||||
`@mention` us!
|
||||
* **Mailing list**: [groups.google.com/d/forum/spack](https://groups.google.com/d/forum/spack):
|
||||
only for announcements. Please use other venues for discussions.
|
||||
|
||||
Contributing
|
||||
------------------------
|
||||
|
@@ -50,4 +50,4 @@ packages:
|
||||
# Apple bundles libuuid in libsystem_c version 1353.100.2,
|
||||
# although the version number used here isn't critical
|
||||
- spec: apple-libuuid@1353.100.2
|
||||
prefix: /Applications/Xcode.app/Contents/Developer/Platforms/MacOSX.platform/Developer/SDKs/MacOSX.sdk
|
||||
prefix: /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk
|
||||
|
@@ -182,6 +182,7 @@ section of the configuration:
|
||||
padded_length: 128
|
||||
|
||||
|
||||
.. _binary_caches_oci:
|
||||
|
||||
-----------------------------------------
|
||||
OCI / Docker V2 registries as build cache
|
||||
|
@@ -37,7 +37,11 @@ to enable reuse for a single installation, and you can use:
|
||||
spack install --fresh <spec>
|
||||
|
||||
to do a fresh install if ``reuse`` is enabled by default.
|
||||
``reuse: true`` is the default.
|
||||
``reuse: dependencies`` is the default.
|
||||
|
||||
.. seealso::
|
||||
|
||||
FAQ: :ref:`Why does Spack pick particular versions and variants? <faq-concretizer-precedence>`
|
||||
|
||||
------------------------------------------
|
||||
Selection of the target microarchitectures
|
||||
@@ -99,547 +103,3 @@ while `py-numpy` still needs an older version:
|
||||
|
||||
Up to Spack v0.20 ``duplicates:strategy:none`` was the default (and only) behavior. From Spack v0.21 the
|
||||
default behavior is ``duplicates:strategy:minimal``.
|
||||
|
||||
.. _build-settings:
|
||||
|
||||
================================
|
||||
Package Settings (packages.yaml)
|
||||
================================
|
||||
|
||||
Spack allows you to customize how your software is built through the
|
||||
``packages.yaml`` file. Using it, you can make Spack prefer particular
|
||||
implementations of virtual dependencies (e.g., MPI or BLAS/LAPACK),
|
||||
or you can make it prefer to build with particular compilers. You can
|
||||
also tell Spack to use *external* software installations already
|
||||
present on your system.
|
||||
|
||||
At a high level, the ``packages.yaml`` file is structured like this:
|
||||
|
||||
.. code-block:: yaml
|
||||
|
||||
packages:
|
||||
package1:
|
||||
# settings for package1
|
||||
package2:
|
||||
# settings for package2
|
||||
# ...
|
||||
all:
|
||||
# settings that apply to all packages.
|
||||
|
||||
So you can either set build preferences specifically for *one* package,
|
||||
or you can specify that certain settings should apply to *all* packages.
|
||||
The types of settings you can customize are described in detail below.
|
||||
|
||||
Spack's build defaults are in the default
|
||||
``etc/spack/defaults/packages.yaml`` file. You can override them in
|
||||
``~/.spack/packages.yaml`` or ``etc/spack/packages.yaml``. For more
|
||||
details on how this works, see :ref:`configuration-scopes`.
|
||||
|
||||
.. _sec-external-packages:
|
||||
|
||||
-----------------
|
||||
External Packages
|
||||
-----------------
|
||||
|
||||
Spack can be configured to use externally-installed
|
||||
packages rather than building its own packages. This may be desirable
|
||||
if machines ship with system packages, such as a customized MPI
|
||||
that should be used instead of Spack building its own MPI.
|
||||
|
||||
External packages are configured through the ``packages.yaml`` file.
|
||||
Here's an example of an external configuration:
|
||||
|
||||
.. code-block:: yaml
|
||||
|
||||
packages:
|
||||
openmpi:
|
||||
externals:
|
||||
- spec: "openmpi@1.4.3%gcc@4.4.7 arch=linux-debian7-x86_64"
|
||||
prefix: /opt/openmpi-1.4.3
|
||||
- spec: "openmpi@1.4.3%gcc@4.4.7 arch=linux-debian7-x86_64+debug"
|
||||
prefix: /opt/openmpi-1.4.3-debug
|
||||
- spec: "openmpi@1.6.5%intel@10.1 arch=linux-debian7-x86_64"
|
||||
prefix: /opt/openmpi-1.6.5-intel
|
||||
|
||||
This example lists three installations of OpenMPI, one built with GCC,
|
||||
one built with GCC and debug information, and another built with Intel.
|
||||
If Spack is asked to build a package that uses one of these MPIs as a
|
||||
dependency, it will use the pre-installed OpenMPI in
|
||||
the given directory. Note that the specified path is the top-level
|
||||
install prefix, not the ``bin`` subdirectory.
|
||||
|
||||
``packages.yaml`` can also be used to specify modules to load instead
|
||||
of the installation prefixes. The following example says that module
|
||||
``CMake/3.7.2`` provides cmake version 3.7.2.
|
||||
|
||||
.. code-block:: yaml
|
||||
|
||||
cmake:
|
||||
externals:
|
||||
- spec: cmake@3.7.2
|
||||
modules:
|
||||
- CMake/3.7.2
|
||||
|
||||
Each ``packages.yaml`` begins with a ``packages:`` attribute, followed
|
||||
by a list of package names. To specify externals, add an ``externals:``
|
||||
attribute under the package name, which lists externals.
|
||||
Each external should specify a ``spec:`` string that should be as
|
||||
well-defined as reasonably possible. If a
|
||||
package lacks a spec component, such as missing a compiler or
|
||||
package version, then Spack will guess the missing component based
|
||||
on its most-favored packages, and it may guess incorrectly.
|
||||
|
||||
Each package version and compiler listed in an external should
|
||||
have entries in Spack's packages and compiler configuration, even
|
||||
though the package and compiler may not ever be built.
|
||||
|
||||
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
|
||||
Prevent packages from being built from sources
|
||||
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
|
||||
|
||||
Adding an external spec in ``packages.yaml`` allows Spack to use an external location,
|
||||
but it does not prevent Spack from building packages from sources. In the above example,
|
||||
Spack might choose for many valid reasons to start building and linking with the
|
||||
latest version of OpenMPI rather than continue using the pre-installed OpenMPI versions.
|
||||
|
||||
To prevent this, the ``packages.yaml`` configuration also allows packages
|
||||
to be flagged as non-buildable. The previous example could be modified to
|
||||
be:
|
||||
|
||||
.. code-block:: yaml
|
||||
|
||||
packages:
|
||||
openmpi:
|
||||
externals:
|
||||
- spec: "openmpi@1.4.3%gcc@4.4.7 arch=linux-debian7-x86_64"
|
||||
prefix: /opt/openmpi-1.4.3
|
||||
- spec: "openmpi@1.4.3%gcc@4.4.7 arch=linux-debian7-x86_64+debug"
|
||||
prefix: /opt/openmpi-1.4.3-debug
|
||||
- spec: "openmpi@1.6.5%intel@10.1 arch=linux-debian7-x86_64"
|
||||
prefix: /opt/openmpi-1.6.5-intel
|
||||
buildable: False
|
||||
|
||||
The addition of the ``buildable`` flag tells Spack that it should never build
|
||||
its own version of OpenMPI from sources, and it will instead always rely on a pre-built
|
||||
OpenMPI.
|
||||
|
||||
.. note::
|
||||
|
||||
If ``concretizer:reuse`` is on (see :ref:`concretizer-options` for more information on that flag)
|
||||
pre-built specs include specs already available from a local store, an upstream store, a registered
|
||||
buildcache or specs marked as externals in ``packages.yaml``. If ``concretizer:reuse`` is off, only
|
||||
external specs in ``packages.yaml`` are included in the list of pre-built specs.
|
||||
|
||||
If an external module is specified as not buildable, then Spack will load the
|
||||
external module into the build environment which can be used for linking.
|
||||
|
||||
The ``buildable`` does not need to be paired with external packages.
|
||||
It could also be used alone to forbid packages that may be
|
||||
buggy or otherwise undesirable.
|
||||
|
||||
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
|
||||
Non-buildable virtual packages
|
||||
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
|
||||
|
||||
Virtual packages in Spack can also be specified as not buildable, and
|
||||
external implementations can be provided. In the example above,
|
||||
OpenMPI is configured as not buildable, but Spack will often prefer
|
||||
other MPI implementations over the externally available OpenMPI. Spack
|
||||
can be configured with every MPI provider not buildable individually,
|
||||
but more conveniently:
|
||||
|
||||
.. code-block:: yaml
|
||||
|
||||
packages:
|
||||
mpi:
|
||||
buildable: False
|
||||
openmpi:
|
||||
externals:
|
||||
- spec: "openmpi@1.4.3%gcc@4.4.7 arch=linux-debian7-x86_64"
|
||||
prefix: /opt/openmpi-1.4.3
|
||||
- spec: "openmpi@1.4.3%gcc@4.4.7 arch=linux-debian7-x86_64+debug"
|
||||
prefix: /opt/openmpi-1.4.3-debug
|
||||
- spec: "openmpi@1.6.5%intel@10.1 arch=linux-debian7-x86_64"
|
||||
prefix: /opt/openmpi-1.6.5-intel
|
||||
|
||||
Spack can then use any of the listed external implementations of MPI
|
||||
to satisfy a dependency, and will choose depending on the compiler and
|
||||
architecture.
|
||||
|
||||
In cases where the concretizer is configured to reuse specs, and other ``mpi`` providers
|
||||
(available via stores or buildcaches) are not wanted, Spack can be configured to require
|
||||
specs matching only the available externals:
|
||||
|
||||
.. code-block:: yaml
|
||||
|
||||
packages:
|
||||
mpi:
|
||||
buildable: False
|
||||
require:
|
||||
- one_of: [
|
||||
"openmpi@1.4.3%gcc@4.4.7 arch=linux-debian7-x86_64",
|
||||
"openmpi@1.4.3%gcc@4.4.7 arch=linux-debian7-x86_64+debug",
|
||||
"openmpi@1.6.5%intel@10.1 arch=linux-debian7-x86_64"
|
||||
]
|
||||
openmpi:
|
||||
externals:
|
||||
- spec: "openmpi@1.4.3%gcc@4.4.7 arch=linux-debian7-x86_64"
|
||||
prefix: /opt/openmpi-1.4.3
|
||||
- spec: "openmpi@1.4.3%gcc@4.4.7 arch=linux-debian7-x86_64+debug"
|
||||
prefix: /opt/openmpi-1.4.3-debug
|
||||
- spec: "openmpi@1.6.5%intel@10.1 arch=linux-debian7-x86_64"
|
||||
prefix: /opt/openmpi-1.6.5-intel
|
||||
|
||||
This configuration prevents any spec using MPI and originating from stores or buildcaches to be reused,
|
||||
unless it matches the requirements under ``packages:mpi:require``. For more information on requirements see
|
||||
:ref:`package-requirements`.
|
||||
|
||||
.. _cmd-spack-external-find:
|
||||
|
||||
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
|
||||
Automatically Find External Packages
|
||||
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
|
||||
|
||||
You can run the :ref:`spack external find <spack-external-find>` command
|
||||
to search for system-provided packages and add them to ``packages.yaml``.
|
||||
After running this command your ``packages.yaml`` may include new entries:
|
||||
|
||||
.. code-block:: yaml
|
||||
|
||||
packages:
|
||||
cmake:
|
||||
externals:
|
||||
- spec: cmake@3.17.2
|
||||
prefix: /usr
|
||||
|
||||
Generally this is useful for detecting a small set of commonly-used packages;
|
||||
for now this is generally limited to finding build-only dependencies.
|
||||
Specific limitations include:
|
||||
|
||||
* Packages are not discoverable by default: For a package to be
|
||||
discoverable with ``spack external find``, it needs to add special
|
||||
logic. See :ref:`here <make-package-findable>` for more details.
|
||||
* The logic does not search through module files, it can only detect
|
||||
packages with executables defined in ``PATH``; you can help Spack locate
|
||||
externals which use module files by loading any associated modules for
|
||||
packages that you want Spack to know about before running
|
||||
``spack external find``.
|
||||
* Spack does not overwrite existing entries in the package configuration:
|
||||
If there is an external defined for a spec at any configuration scope,
|
||||
then Spack will not add a new external entry (``spack config blame packages``
|
||||
can help locate all external entries).
|
||||
|
||||
.. _package-requirements:
|
||||
|
||||
--------------------
|
||||
Package Requirements
|
||||
--------------------
|
||||
|
||||
Spack can be configured to always use certain compilers, package
|
||||
versions, and variants during concretization through package
|
||||
requirements.
|
||||
|
||||
Package requirements are useful when you find yourself repeatedly
|
||||
specifying the same constraints on the command line, and wish that
|
||||
Spack respects these constraints whether you mention them explicitly
|
||||
or not. Another use case is specifying constraints that should apply
|
||||
to all root specs in an environment, without having to repeat the
|
||||
constraint everywhere.
|
||||
|
||||
Apart from that, requirements config is more flexible than constraints
|
||||
on the command line, because it can specify constraints on packages
|
||||
*when they occur* as a dependency. In contrast, on the command line it
|
||||
is not possible to specify constraints on dependencies while also keeping
|
||||
those dependencies optional.
|
||||
|
||||
^^^^^^^^^^^^^^^^^^^
|
||||
Requirements syntax
|
||||
^^^^^^^^^^^^^^^^^^^
|
||||
|
||||
The package requirements configuration is specified in ``packages.yaml``,
|
||||
keyed by package name and expressed using the Spec syntax. In the simplest
|
||||
case you can specify attributes that you always want the package to have
|
||||
by providing a single spec string to ``require``:
|
||||
|
||||
.. code-block:: yaml
|
||||
|
||||
packages:
|
||||
libfabric:
|
||||
require: "@1.13.2"
|
||||
|
||||
In the above example, ``libfabric`` will always build with version 1.13.2. If you
|
||||
need to compose multiple configuration scopes ``require`` accepts a list of
|
||||
strings:
|
||||
|
||||
.. code-block:: yaml
|
||||
|
||||
packages:
|
||||
libfabric:
|
||||
require:
|
||||
- "@1.13.2"
|
||||
- "%gcc"
|
||||
|
||||
In this case ``libfabric`` will always build with version 1.13.2 **and** using GCC
|
||||
as a compiler.
|
||||
|
||||
For more complex use cases, require accepts also a list of objects. These objects
|
||||
must have either a ``any_of`` or a ``one_of`` field, containing a list of spec strings,
|
||||
and they can optionally have a ``when`` and a ``message`` attribute:
|
||||
|
||||
.. code-block:: yaml
|
||||
|
||||
packages:
|
||||
openmpi:
|
||||
require:
|
||||
- any_of: ["@4.1.5", "%gcc"]
|
||||
message: "in this example only 4.1.5 can build with other compilers"
|
||||
|
||||
``any_of`` is a list of specs. One of those specs must be satisfied
|
||||
and it is also allowed for the concretized spec to match more than one.
|
||||
In the above example, that means you could build ``openmpi@4.1.5%gcc``,
|
||||
``openmpi@4.1.5%clang`` or ``openmpi@3.9%gcc``, but
|
||||
not ``openmpi@3.9%clang``.
|
||||
|
||||
If a custom message is provided, and the requirement is not satisfiable,
|
||||
Spack will print the custom error message:
|
||||
|
||||
.. code-block:: console
|
||||
|
||||
$ spack spec openmpi@3.9%clang
|
||||
==> Error: in this example only 4.1.5 can build with other compilers
|
||||
|
||||
We could express a similar requirement using the ``when`` attribute:
|
||||
|
||||
.. code-block:: yaml
|
||||
|
||||
packages:
|
||||
openmpi:
|
||||
require:
|
||||
- any_of: ["%gcc"]
|
||||
when: "@:4.1.4"
|
||||
message: "in this example only 4.1.5 can build with other compilers"
|
||||
|
||||
In the example above, if the version turns out to be 4.1.4 or less, we require the compiler to be GCC.
|
||||
For readability, Spack also allows a ``spec`` key accepting a string when there is only a single
|
||||
constraint:
|
||||
|
||||
.. code-block:: yaml
|
||||
|
||||
packages:
|
||||
openmpi:
|
||||
require:
|
||||
- spec: "%gcc"
|
||||
when: "@:4.1.4"
|
||||
message: "in this example only 4.1.5 can build with other compilers"
|
||||
|
||||
This code snippet and the one before it are semantically equivalent.
|
||||
|
||||
Finally, instead of ``any_of`` you can use ``one_of`` which also takes a list of specs. The final
|
||||
concretized spec must match one and only one of them:
|
||||
|
||||
.. code-block:: yaml
|
||||
|
||||
packages:
|
||||
mpich:
|
||||
require:
|
||||
- one_of: ["+cuda", "+rocm"]
|
||||
|
||||
In the example above, that means you could build ``mpich+cuda`` or ``mpich+rocm`` but not ``mpich+cuda+rocm``.
|
||||
|
||||
.. note::
|
||||
|
||||
For ``any_of`` and ``one_of``, the order of specs indicates a
|
||||
preference: items that appear earlier in the list are preferred
|
||||
(note that these preferences can be ignored in favor of others).
|
||||
|
||||
.. note::
|
||||
|
||||
When using a conditional requirement, Spack is allowed to actively avoid the triggering
|
||||
condition (the ``when=...`` spec) if that leads to a concrete spec with better scores in
|
||||
the optimization criteria. To check the current optimization criteria and their
|
||||
priorities you can run ``spack solve zlib``.
|
||||
|
||||
^^^^^^^^^^^^^^^^^^^^^^^^^^^^
|
||||
Setting default requirements
|
||||
^^^^^^^^^^^^^^^^^^^^^^^^^^^^
|
||||
|
||||
You can also set default requirements for all packages under ``all``
|
||||
like this:
|
||||
|
||||
.. code-block:: yaml
|
||||
|
||||
packages:
|
||||
all:
|
||||
require: '%clang'
|
||||
|
||||
which means every spec will be required to use ``clang`` as a compiler.
|
||||
|
||||
Note that in this case ``all`` represents a *default set of requirements* -
|
||||
if there are specific package requirements, then the default requirements
|
||||
under ``all`` are disregarded. For example, with a configuration like this:
|
||||
|
||||
.. code-block:: yaml
|
||||
|
||||
packages:
|
||||
all:
|
||||
require: '%clang'
|
||||
cmake:
|
||||
require: '%gcc'
|
||||
|
||||
Spack requires ``cmake`` to use ``gcc`` and all other nodes (including ``cmake``
|
||||
dependencies) to use ``clang``.
|
||||
|
||||
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
|
||||
Setting requirements on virtual specs
|
||||
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
|
||||
|
||||
A requirement on a virtual spec applies whenever that virtual is present in the DAG.
|
||||
This can be useful for fixing which virtual provider you want to use:
|
||||
|
||||
.. code-block:: yaml
|
||||
|
||||
packages:
|
||||
mpi:
|
||||
require: 'mvapich2 %gcc'
|
||||
|
||||
With the configuration above the only allowed ``mpi`` provider is ``mvapich2 %gcc``.
|
||||
|
||||
Requirements on the virtual spec and on the specific provider are both applied, if
|
||||
present. For instance with a configuration like:
|
||||
|
||||
.. code-block:: yaml
|
||||
|
||||
packages:
|
||||
mpi:
|
||||
require: 'mvapich2 %gcc'
|
||||
mvapich2:
|
||||
require: '~cuda'
|
||||
|
||||
you will use ``mvapich2~cuda %gcc`` as an ``mpi`` provider.
|
||||
|
||||
.. _package-preferences:
|
||||
|
||||
-------------------
|
||||
Package Preferences
|
||||
-------------------
|
||||
|
||||
In some cases package requirements can be too strong, and package
|
||||
preferences are the better option. Package preferences do not impose
|
||||
constraints on packages for particular versions or variants values,
|
||||
they rather only set defaults. The concretizer is free to change
|
||||
them if it must, due to other constraints, and also prefers reusing
|
||||
installed packages over building new ones that are a better match for
|
||||
preferences.
|
||||
|
||||
Most package preferences (``compilers``, ``target`` and ``providers``)
|
||||
can only be set globally under the ``all`` section of ``packages.yaml``:
|
||||
|
||||
.. code-block:: yaml
|
||||
|
||||
packages:
|
||||
all:
|
||||
compiler: [gcc@12.2.0, clang@12:, oneapi@2023:]
|
||||
target: [x86_64_v3]
|
||||
providers:
|
||||
mpi: [mvapich2, mpich, openmpi]
|
||||
|
||||
These preferences override Spack's default and effectively reorder priorities
|
||||
when looking for the best compiler, target or virtual package provider. Each
|
||||
preference takes an ordered list of spec constraints, with earlier entries in
|
||||
the list being preferred over later entries.
|
||||
|
||||
In the example above all packages prefer to be compiled with ``gcc@12.2.0``,
|
||||
to target the ``x86_64_v3`` microarchitecture and to use ``mvapich2`` if they
|
||||
depend on ``mpi``.
|
||||
|
||||
The ``variants`` and ``version`` preferences can be set under
|
||||
package specific sections of the ``packages.yaml`` file:
|
||||
|
||||
.. code-block:: yaml
|
||||
|
||||
packages:
|
||||
opencv:
|
||||
variants: +debug
|
||||
gperftools:
|
||||
version: [2.2, 2.4, 2.3]
|
||||
|
||||
In this case, the preference for ``opencv`` is to build with debug options, while
|
||||
``gperftools`` prefers version 2.2 over 2.4.
|
||||
|
||||
Any preference can be overwritten on the command line if explicitly requested.
|
||||
|
||||
Preferences cannot overcome explicit constraints, as they only set a preferred
|
||||
ordering among homogeneous attribute values. Going back to the example, if
|
||||
``gperftools@2.3:`` was requested, then Spack will install version 2.4
|
||||
since the most preferred version 2.2 is prohibited by the version constraint.
|
||||
|
||||
.. _package_permissions:
|
||||
|
||||
-------------------
|
||||
Package Permissions
|
||||
-------------------
|
||||
|
||||
Spack can be configured to assign permissions to the files installed
|
||||
by a package.
|
||||
|
||||
In the ``packages.yaml`` file under ``permissions``, the attributes
|
||||
``read``, ``write``, and ``group`` control the package
|
||||
permissions. These attributes can be set per-package, or for all
|
||||
packages under ``all``. If permissions are set under ``all`` and for a
|
||||
specific package, the package-specific settings take precedence.
|
||||
|
||||
The ``read`` and ``write`` attributes take one of ``user``, ``group``,
|
||||
and ``world``.
|
||||
|
||||
.. code-block:: yaml
|
||||
|
||||
packages:
|
||||
all:
|
||||
permissions:
|
||||
write: group
|
||||
group: spack
|
||||
my_app:
|
||||
permissions:
|
||||
read: group
|
||||
group: my_team
|
||||
|
||||
The permissions settings describe the broadest level of access to
|
||||
installations of the specified packages. The execute permissions of
|
||||
the file are set to the same level as read permissions for those files
|
||||
that are executable. The default setting for ``read`` is ``world``,
|
||||
and for ``write`` is ``user``. In the example above, installations of
|
||||
``my_app`` will be installed with user and group permissions but no
|
||||
world permissions, and owned by the group ``my_team``. All other
|
||||
packages will be installed with user and group write privileges, and
|
||||
world read privileges. Those packages will be owned by the group
|
||||
``spack``.
|
||||
|
||||
The ``group`` attribute assigns a Unix-style group to a package. All
|
||||
files installed by the package will be owned by the assigned group,
|
||||
and the sticky group bit will be set on the install prefix and all
|
||||
directories inside the install prefix. This will ensure that even
|
||||
manually placed files within the install prefix are owned by the
|
||||
assigned group. If no group is assigned, Spack will allow the OS
|
||||
default behavior to go as expected.
|
||||
|
||||
----------------------------
|
||||
Assigning Package Attributes
|
||||
----------------------------
|
||||
|
||||
You can assign class-level attributes in the configuration:
|
||||
|
||||
.. code-block:: yaml
|
||||
|
||||
packages:
|
||||
mpileaks:
|
||||
# Override existing attributes
|
||||
url: http://www.somewhereelse.com/mpileaks-1.0.tar.gz
|
||||
# ... or add new ones
|
||||
x: 1
|
||||
|
||||
Attributes set this way will be accessible to any method executed
|
||||
in the package.py file (e.g. the ``install()`` method). Values for these
|
||||
attributes may be any value parseable by yaml.
|
||||
|
||||
These can only be applied to specific packages, not "all" or
|
||||
virtual packages.
|
||||
|
@@ -82,7 +82,7 @@ class already contains:
|
||||
|
||||
.. code-block:: python
|
||||
|
||||
depends_on('cmake', type='build')
|
||||
depends_on("cmake", type="build")
|
||||
|
||||
|
||||
If you need to specify a particular version requirement, you can
|
||||
@@ -90,7 +90,7 @@ override this in your package:
|
||||
|
||||
.. code-block:: python
|
||||
|
||||
depends_on('cmake@2.8.12:', type='build')
|
||||
depends_on("cmake@2.8.12:", type="build")
|
||||
|
||||
|
||||
^^^^^^^^^^^^^^^^^^^
|
||||
@@ -137,10 +137,10 @@ and without the :meth:`~spack.build_systems.cmake.CMakeBuilder.define` and
|
||||
|
||||
def cmake_args(self):
|
||||
args = [
|
||||
'-DWHATEVER:STRING=somevalue',
|
||||
self.define('ENABLE_BROKEN_FEATURE', False),
|
||||
self.define_from_variant('DETECT_HDF5', 'hdf5'),
|
||||
self.define_from_variant('THREADS'), # True if +threads
|
||||
"-DWHATEVER:STRING=somevalue",
|
||||
self.define("ENABLE_BROKEN_FEATURE", False),
|
||||
self.define_from_variant("DETECT_HDF5", "hdf5"),
|
||||
self.define_from_variant("THREADS"), # True if +threads
|
||||
]
|
||||
|
||||
return args
|
||||
@@ -151,10 +151,10 @@ and CMake simply ignores the empty command line argument. For example the follow
|
||||
|
||||
.. code-block:: python
|
||||
|
||||
variant('example', default=True, when='@2.0:')
|
||||
variant("example", default=True, when="@2.0:")
|
||||
|
||||
def cmake_args(self):
|
||||
return [self.define_from_variant('EXAMPLE', 'example')]
|
||||
return [self.define_from_variant("EXAMPLE", "example")]
|
||||
|
||||
will generate ``'cmake' '-DEXAMPLE=ON' ...`` when `@2.0: +example` is met, but will
|
||||
result in ``'cmake' '' ...`` when the spec version is below ``2.0``.
|
||||
@@ -193,9 +193,9 @@ a variant to control this:
|
||||
|
||||
.. code-block:: python
|
||||
|
||||
variant('build_type', default='RelWithDebInfo',
|
||||
description='CMake build type',
|
||||
values=('Debug', 'Release', 'RelWithDebInfo', 'MinSizeRel'))
|
||||
variant("build_type", default="RelWithDebInfo",
|
||||
description="CMake build type",
|
||||
values=("Debug", "Release", "RelWithDebInfo", "MinSizeRel"))
|
||||
|
||||
However, not every CMake package accepts all four of these options.
|
||||
Grep the ``CMakeLists.txt`` file to see if the default values are
|
||||
@@ -205,9 +205,9 @@ package overrides the default variant with:
|
||||
|
||||
.. code-block:: python
|
||||
|
||||
variant('build_type', default='DebugRelease',
|
||||
description='The build type to build',
|
||||
values=('Debug', 'Release', 'DebugRelease'))
|
||||
variant("build_type", default="DebugRelease",
|
||||
description="The build type to build",
|
||||
values=("Debug", "Release", "DebugRelease"))
|
||||
|
||||
For more information on ``CMAKE_BUILD_TYPE``, see:
|
||||
https://cmake.org/cmake/help/latest/variable/CMAKE_BUILD_TYPE.html
|
||||
@@ -250,7 +250,7 @@ generator is Ninja. To switch to the Ninja generator, simply add:
|
||||
|
||||
.. code-block:: python
|
||||
|
||||
generator = 'Ninja'
|
||||
generator = "Ninja"
|
||||
|
||||
|
||||
``CMakePackage`` defaults to "Unix Makefiles". If you switch to the
|
||||
@@ -258,7 +258,7 @@ Ninja generator, make sure to add:
|
||||
|
||||
.. code-block:: python
|
||||
|
||||
depends_on('ninja', type='build')
|
||||
depends_on("ninja", type="build")
|
||||
|
||||
to the package as well. Aside from that, you shouldn't need to do
|
||||
anything else. Spack will automatically detect that you are using
|
||||
@@ -288,7 +288,7 @@ like so:
|
||||
|
||||
.. code-block:: python
|
||||
|
||||
root_cmakelists_dir = 'src'
|
||||
root_cmakelists_dir = "src"
|
||||
|
||||
|
||||
Note that this path is relative to the root of the extracted tarball,
|
||||
@@ -304,7 +304,7 @@ different sub-directory, simply override ``build_directory`` like so:
|
||||
|
||||
.. code-block:: python
|
||||
|
||||
build_directory = 'my-build'
|
||||
build_directory = "my-build"
|
||||
|
||||
^^^^^^^^^^^^^^^^^^^^^^^^^
|
||||
Build and install targets
|
||||
@@ -324,8 +324,8 @@ library or build the documentation, you can add these like so:
|
||||
|
||||
.. code-block:: python
|
||||
|
||||
build_targets = ['all', 'docs']
|
||||
install_targets = ['install', 'docs']
|
||||
build_targets = ["all", "docs"]
|
||||
install_targets = ["install", "docs"]
|
||||
|
||||
^^^^^^^
|
||||
Testing
|
||||
|
@@ -53,18 +53,24 @@ Install the oneAPI compilers::
|
||||
|
||||
Add the compilers to your ``compilers.yaml`` so spack can use them::
|
||||
|
||||
spack compiler add `spack location -i intel-oneapi-compilers`/compiler/latest/linux/bin/intel64
|
||||
spack compiler add `spack location -i intel-oneapi-compilers`/compiler/latest/linux/bin
|
||||
spack compiler add `spack location -i intel-oneapi-compilers`/compiler/latest/bin
|
||||
|
||||
Verify that the compilers are available::
|
||||
|
||||
spack compiler list
|
||||
|
||||
Note that 2024 and later releases do not include ``icc``. Before 2024,
|
||||
the package layout was different::
|
||||
|
||||
spack compiler add `spack location -i intel-oneapi-compilers`/compiler/latest/linux/bin/intel64
|
||||
spack compiler add `spack location -i intel-oneapi-compilers`/compiler/latest/linux/bin
|
||||
|
||||
The ``intel-oneapi-compilers`` package includes 2 families of
|
||||
compilers:
|
||||
|
||||
* ``intel``: ``icc``, ``icpc``, ``ifort``. Intel's *classic*
|
||||
compilers.
|
||||
compilers. 2024 and later releases contain ``ifort``, but not
|
||||
``icc`` and ``icpc``.
|
||||
* ``oneapi``: ``icx``, ``icpx``, ``ifx``. Intel's new generation of
|
||||
compilers based on LLVM.
|
||||
|
||||
@@ -89,8 +95,8 @@ Install the oneAPI compilers::
|
||||
|
||||
Add the compilers to your ``compilers.yaml`` so Spack can use them::
|
||||
|
||||
spack compiler add `spack location -i intel-oneapi-compilers`/compiler/latest/linux/bin/intel64
|
||||
spack compiler add `spack location -i intel-oneapi-compilers`/compiler/latest/linux/bin
|
||||
spack compiler add `spack location -i intel-oneapi-compilers`/compiler/latest/bin
|
||||
spack compiler add `spack location -i intel-oneapi-compilers`/compiler/latest/bin
|
||||
|
||||
Verify that the compilers are available::
|
||||
|
||||
@@ -146,8 +152,7 @@ Compilers
|
||||
To use the compilers, add some information about the installation to
|
||||
``compilers.yaml``. For most users, it is sufficient to do::
|
||||
|
||||
spack compiler add /opt/intel/oneapi/compiler/latest/linux/bin/intel64
|
||||
spack compiler add /opt/intel/oneapi/compiler/latest/linux/bin
|
||||
spack compiler add /opt/intel/oneapi/compiler/latest/bin
|
||||
|
||||
Adapt the paths above if you did not install the tools in the default
|
||||
location. After adding the compilers, using them is the same
|
||||
@@ -156,6 +161,12 @@ Another option is to manually add the configuration to
|
||||
``compilers.yaml`` as described in :ref:`Compiler configuration
|
||||
<compiler-config>`.
|
||||
|
||||
Before 2024, the directory structure was different::
|
||||
|
||||
spack compiler add /opt/intel/oneapi/compiler/latest/linux/bin/intel64
|
||||
spack compiler add /opt/intel/oneapi/compiler/latest/linux/bin
|
||||
|
||||
|
||||
Libraries
|
||||
---------
|
||||
|
||||
|
@@ -392,7 +392,7 @@ See section
|
||||
:ref:`Configuration Scopes <configuration-scopes>`
|
||||
for an explanation about the different files
|
||||
and section
|
||||
:ref:`Build customization <build-settings>`
|
||||
:ref:`Build customization <packages-config>`
|
||||
for specifics and examples for ``packages.yaml`` files.
|
||||
|
||||
.. If your system administrator did not provide modules for pre-installed Intel
|
||||
@@ -934,9 +934,9 @@ a *virtual* ``mkl`` package is declared in Spack.
|
||||
.. code-block:: python
|
||||
|
||||
# Examples for absolute and conditional dependencies:
|
||||
depends_on('mkl')
|
||||
depends_on('mkl', when='+mkl')
|
||||
depends_on('mkl', when='fftw=mkl')
|
||||
depends_on("mkl")
|
||||
depends_on("mkl", when="+mkl")
|
||||
depends_on("mkl", when="fftw=mkl")
|
||||
|
||||
The ``MKLROOT`` environment variable (part of the documented API) will be set
|
||||
during all stages of client package installation, and is available to both
|
||||
@@ -972,8 +972,8 @@ a *virtual* ``mkl`` package is declared in Spack.
|
||||
def configure_args(self):
|
||||
args = []
|
||||
...
|
||||
args.append('--with-blas=%s' % self.spec['blas'].libs.ld_flags)
|
||||
args.append('--with-lapack=%s' % self.spec['lapack'].libs.ld_flags)
|
||||
args.append("--with-blas=%s" % self.spec["blas"].libs.ld_flags)
|
||||
args.append("--with-lapack=%s" % self.spec["lapack"].libs.ld_flags)
|
||||
...
|
||||
|
||||
.. tip::
|
||||
@@ -989,13 +989,13 @@ a *virtual* ``mkl`` package is declared in Spack.
|
||||
|
||||
.. code-block:: python
|
||||
|
||||
self.spec['blas'].headers.include_flags
|
||||
self.spec["blas"].headers.include_flags
|
||||
|
||||
and to generate linker options (``-L<dir> -llibname ...``), use the same as above,
|
||||
|
||||
.. code-block:: python
|
||||
|
||||
self.spec['blas'].libs.ld_flags
|
||||
self.spec["blas"].libs.ld_flags
|
||||
|
||||
See
|
||||
:ref:`MakefilePackage <makefilepackage>`
|
||||
|
@@ -88,7 +88,7 @@ override the ``luarocks_args`` method like so:
|
||||
.. code-block:: python
|
||||
|
||||
def luarocks_args(self):
|
||||
return ['flag1', 'flag2']
|
||||
return ["flag1", "flag2"]
|
||||
|
||||
One common use of this is to override warnings or flags for newer compilers, as in:
|
||||
|
||||
|
@@ -48,8 +48,8 @@ class automatically adds the following dependencies:
|
||||
|
||||
.. code-block:: python
|
||||
|
||||
depends_on('java', type=('build', 'run'))
|
||||
depends_on('maven', type='build')
|
||||
depends_on("java", type=("build", "run"))
|
||||
depends_on("maven", type="build")
|
||||
|
||||
|
||||
In the ``pom.xml`` file, you may see sections like:
|
||||
@@ -72,8 +72,8 @@ should add:
|
||||
|
||||
.. code-block:: python
|
||||
|
||||
depends_on('java@7:', type='build')
|
||||
depends_on('maven@3.5.4:', type='build')
|
||||
depends_on("java@7:", type="build")
|
||||
depends_on("maven@3.5.4:", type="build")
|
||||
|
||||
|
||||
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
|
||||
@@ -88,9 +88,9 @@ the build phase. For example:
|
||||
|
||||
def build_args(self):
|
||||
return [
|
||||
'-Pdist,native',
|
||||
'-Dtar',
|
||||
'-Dmaven.javadoc.skip=true'
|
||||
"-Pdist,native",
|
||||
"-Dtar",
|
||||
"-Dmaven.javadoc.skip=true"
|
||||
]
|
||||
|
||||
|
||||
|
@@ -86,8 +86,8 @@ the ``MesonPackage`` base class already contains:
|
||||
|
||||
.. code-block:: python
|
||||
|
||||
depends_on('meson', type='build')
|
||||
depends_on('ninja', type='build')
|
||||
depends_on("meson", type="build")
|
||||
depends_on("ninja", type="build")
|
||||
|
||||
|
||||
If you need to specify a particular version requirement, you can
|
||||
@@ -95,8 +95,8 @@ override this in your package:
|
||||
|
||||
.. code-block:: python
|
||||
|
||||
depends_on('meson@0.43.0:', type='build')
|
||||
depends_on('ninja', type='build')
|
||||
depends_on("meson@0.43.0:", type="build")
|
||||
depends_on("ninja", type="build")
|
||||
|
||||
|
||||
^^^^^^^^^^^^^^^^^^^
|
||||
@@ -121,7 +121,7 @@ override the ``meson_args`` method like so:
|
||||
.. code-block:: python
|
||||
|
||||
def meson_args(self):
|
||||
return ['--warnlevel=3']
|
||||
return ["--warnlevel=3"]
|
||||
|
||||
|
||||
This method can be used to pass flags as well as variables.
|
||||
|
@@ -118,7 +118,7 @@ so ``PerlPackage`` contains:
|
||||
|
||||
.. code-block:: python
|
||||
|
||||
extends('perl')
|
||||
extends("perl")
|
||||
|
||||
|
||||
If your package requires a specific version of Perl, you should
|
||||
@@ -132,14 +132,14 @@ properly. If your package uses ``Makefile.PL`` to build, add:
|
||||
|
||||
.. code-block:: python
|
||||
|
||||
depends_on('perl-extutils-makemaker', type='build')
|
||||
depends_on("perl-extutils-makemaker", type="build")
|
||||
|
||||
|
||||
If your package uses ``Build.PL`` to build, add:
|
||||
|
||||
.. code-block:: python
|
||||
|
||||
depends_on('perl-module-build', type='build')
|
||||
depends_on("perl-module-build", type="build")
|
||||
|
||||
|
||||
^^^^^^^^^^^^^^^^^
|
||||
@@ -165,11 +165,11 @@ arguments to ``Makefile.PL`` or ``Build.PL`` by overriding
|
||||
.. code-block:: python
|
||||
|
||||
def configure_args(self):
|
||||
expat = self.spec['expat'].prefix
|
||||
expat = self.spec["expat"].prefix
|
||||
|
||||
return [
|
||||
'EXPATLIBPATH={0}'.format(expat.lib),
|
||||
'EXPATINCPATH={0}'.format(expat.include),
|
||||
"EXPATLIBPATH={0}".format(expat.lib),
|
||||
"EXPATINCPATH={0}".format(expat.include),
|
||||
]
|
||||
|
||||
|
||||
|
@@ -83,7 +83,7 @@ base class already contains:
|
||||
|
||||
.. code-block:: python
|
||||
|
||||
depends_on('qt', type='build')
|
||||
depends_on("qt", type="build")
|
||||
|
||||
|
||||
If you want to specify a particular version requirement, or need to
|
||||
@@ -91,7 +91,7 @@ link to the ``qt`` libraries, you can override this in your package:
|
||||
|
||||
.. code-block:: python
|
||||
|
||||
depends_on('qt@5.6.0:')
|
||||
depends_on("qt@5.6.0:")
|
||||
|
||||
^^^^^^^^^^^^^^^^^^^^^^^^^^
|
||||
Passing arguments to qmake
|
||||
@@ -103,7 +103,7 @@ override the ``qmake_args`` method like so:
|
||||
.. code-block:: python
|
||||
|
||||
def qmake_args(self):
|
||||
return ['-recursive']
|
||||
return ["-recursive"]
|
||||
|
||||
|
||||
This method can be used to pass flags as well as variables.
|
||||
@@ -118,7 +118,7 @@ sub-directory by adding the following to the package:
|
||||
|
||||
.. code-block:: python
|
||||
|
||||
build_directory = 'src'
|
||||
build_directory = "src"
|
||||
|
||||
|
||||
^^^^^^^^^^^^^^^^^^^^^^
|
||||
|
@@ -163,28 +163,28 @@ attributes that can be used to set ``homepage``, ``url``, ``list_url``, and
|
||||
|
||||
.. code-block:: python
|
||||
|
||||
cran = 'caret'
|
||||
cran = "caret"
|
||||
|
||||
is equivalent to:
|
||||
|
||||
.. code-block:: python
|
||||
|
||||
homepage = 'https://cloud.r-project.org/package=caret'
|
||||
url = 'https://cloud.r-project.org/src/contrib/caret_6.0-86.tar.gz'
|
||||
list_url = 'https://cloud.r-project.org/src/contrib/Archive/caret'
|
||||
homepage = "https://cloud.r-project.org/package=caret"
|
||||
url = "https://cloud.r-project.org/src/contrib/caret_6.0-86.tar.gz"
|
||||
list_url = "https://cloud.r-project.org/src/contrib/Archive/caret"
|
||||
|
||||
Likewise, the following ``bioc`` attribute:
|
||||
|
||||
.. code-block:: python
|
||||
|
||||
bioc = 'BiocVersion'
|
||||
bioc = "BiocVersion"
|
||||
|
||||
is equivalent to:
|
||||
|
||||
.. code-block:: python
|
||||
|
||||
homepage = 'https://bioconductor.org/packages/BiocVersion/'
|
||||
git = 'https://git.bioconductor.org/packages/BiocVersion'
|
||||
homepage = "https://bioconductor.org/packages/BiocVersion/"
|
||||
git = "https://git.bioconductor.org/packages/BiocVersion"
|
||||
|
||||
|
||||
^^^^^^^^^^^^^^^^^^^^^^^^^
|
||||
@@ -200,7 +200,7 @@ base class contains:
|
||||
|
||||
.. code-block:: python
|
||||
|
||||
extends('r')
|
||||
extends("r")
|
||||
|
||||
|
||||
Take a close look at the homepage for ``caret``. If you look at the
|
||||
@@ -209,7 +209,7 @@ You should add this to your package like so:
|
||||
|
||||
.. code-block:: python
|
||||
|
||||
depends_on('r@3.2.0:', type=('build', 'run'))
|
||||
depends_on("r@3.2.0:", type=("build", "run"))
|
||||
|
||||
|
||||
^^^^^^^^^^^^^^
|
||||
@@ -227,7 +227,7 @@ and list all of their dependencies in the following sections:
|
||||
* LinkingTo
|
||||
|
||||
As far as Spack is concerned, all 3 of these dependency types
|
||||
correspond to ``type=('build', 'run')``, so you don't have to worry
|
||||
correspond to ``type=("build", "run")``, so you don't have to worry
|
||||
about the details. If you are curious what they mean,
|
||||
https://github.com/spack/spack/issues/2951 has a pretty good summary:
|
||||
|
||||
@@ -330,7 +330,7 @@ the dependency:
|
||||
|
||||
.. code-block:: python
|
||||
|
||||
depends_on('r-lattice@0.20:', type=('build', 'run'))
|
||||
depends_on("r-lattice@0.20:", type=("build", "run"))
|
||||
|
||||
|
||||
^^^^^^^^^^^^^^^^^^
|
||||
@@ -361,20 +361,20 @@ like so:
|
||||
.. code-block:: python
|
||||
|
||||
def configure_args(self):
|
||||
mpi_name = self.spec['mpi'].name
|
||||
mpi_name = self.spec["mpi"].name
|
||||
|
||||
# The type of MPI. Supported values are:
|
||||
# OPENMPI, LAM, MPICH, MPICH2, or CRAY
|
||||
if mpi_name == 'openmpi':
|
||||
Rmpi_type = 'OPENMPI'
|
||||
elif mpi_name == 'mpich':
|
||||
Rmpi_type = 'MPICH2'
|
||||
if mpi_name == "openmpi":
|
||||
Rmpi_type = "OPENMPI"
|
||||
elif mpi_name == "mpich":
|
||||
Rmpi_type = "MPICH2"
|
||||
else:
|
||||
raise InstallError('Unsupported MPI type')
|
||||
raise InstallError("Unsupported MPI type")
|
||||
|
||||
return [
|
||||
'--with-Rmpi-type={0}'.format(Rmpi_type),
|
||||
'--with-mpi={0}'.format(spec['mpi'].prefix),
|
||||
"--with-Rmpi-type={0}".format(Rmpi_type),
|
||||
"--with-mpi={0}".format(spec["mpi"].prefix),
|
||||
]
|
||||
|
||||
|
||||
|
@@ -84,8 +84,8 @@ The ``*.gemspec`` file may contain something like:
|
||||
|
||||
.. code-block:: ruby
|
||||
|
||||
summary = 'An implementation of the AsciiDoc text processor and publishing toolchain'
|
||||
description = 'A fast, open source text processor and publishing toolchain for converting AsciiDoc content to HTML 5, DocBook 5, and other formats.'
|
||||
summary = "An implementation of the AsciiDoc text processor and publishing toolchain"
|
||||
description = "A fast, open source text processor and publishing toolchain for converting AsciiDoc content to HTML 5, DocBook 5, and other formats."
|
||||
|
||||
|
||||
Either of these can be used for the description of the Spack package.
|
||||
@@ -98,7 +98,7 @@ The ``*.gemspec`` file may contain something like:
|
||||
|
||||
.. code-block:: ruby
|
||||
|
||||
homepage = 'https://asciidoctor.org'
|
||||
homepage = "https://asciidoctor.org"
|
||||
|
||||
|
||||
This should be used as the official homepage of the Spack package.
|
||||
@@ -112,21 +112,21 @@ the base class contains:
|
||||
|
||||
.. code-block:: python
|
||||
|
||||
extends('ruby')
|
||||
extends("ruby")
|
||||
|
||||
|
||||
The ``*.gemspec`` file may contain something like:
|
||||
|
||||
.. code-block:: ruby
|
||||
|
||||
required_ruby_version = '>= 2.3.0'
|
||||
required_ruby_version = ">= 2.3.0"
|
||||
|
||||
|
||||
This can be added to the Spack package using:
|
||||
|
||||
.. code-block:: python
|
||||
|
||||
depends_on('ruby@2.3.0:', type=('build', 'run'))
|
||||
depends_on("ruby@2.3.0:", type=("build", "run"))
|
||||
|
||||
|
||||
^^^^^^^^^^^^^^^^^
|
||||
|
@@ -124,7 +124,7 @@ are wrong, you can provide the names yourself by overriding
|
||||
|
||||
.. code-block:: python
|
||||
|
||||
import_modules = ['PyQt5']
|
||||
import_modules = ["PyQt5"]
|
||||
|
||||
|
||||
These tests often catch missing dependencies and non-RPATHed
|
||||
|
@@ -63,8 +63,8 @@ run package-specific unit tests.
|
||||
.. code-block:: python
|
||||
|
||||
def installtest(self):
|
||||
with working_dir('test'):
|
||||
pytest = which('py.test')
|
||||
with working_dir("test"):
|
||||
pytest = which("py.test")
|
||||
pytest()
|
||||
|
||||
|
||||
@@ -93,7 +93,7 @@ the following dependency automatically:
|
||||
|
||||
.. code-block:: python
|
||||
|
||||
depends_on('python@2.5:', type='build')
|
||||
depends_on("python@2.5:", type="build")
|
||||
|
||||
|
||||
Waf only supports Python 2.5 and up.
|
||||
@@ -113,7 +113,7 @@ phase, you can use:
|
||||
args = []
|
||||
|
||||
if self.run_tests:
|
||||
args.append('--test')
|
||||
args.append("--test")
|
||||
|
||||
return args
|
||||
|
||||
|
@@ -17,7 +17,7 @@ case you want to skip directly to specific docs:
|
||||
* :ref:`config.yaml <config-yaml>`
|
||||
* :ref:`mirrors.yaml <mirrors>`
|
||||
* :ref:`modules.yaml <modules>`
|
||||
* :ref:`packages.yaml <build-settings>`
|
||||
* :ref:`packages.yaml <packages-config>`
|
||||
* :ref:`repos.yaml <repositories>`
|
||||
|
||||
You can also add any of these as inline configuration in the YAML
|
||||
|
@@ -24,6 +24,16 @@ image, or to set up a proper entrypoint to run the image. These tasks are
|
||||
usually both necessary and repetitive, so Spack comes with a command
|
||||
to generate recipes for container images starting from a ``spack.yaml``.
|
||||
|
||||
.. seealso::
|
||||
|
||||
This page is a reference for generating recipes to build container images.
|
||||
It means that your environment is built from scratch inside the container
|
||||
runtime.
|
||||
|
||||
Since v0.21, Spack can also create container images from existing package installations
|
||||
on your host system. See :ref:`binary_caches_oci` for more information on
|
||||
that topic.
|
||||
|
||||
--------------------
|
||||
A Quick Introduction
|
||||
--------------------
|
||||
|
@@ -9,46 +9,42 @@
|
||||
Custom Extensions
|
||||
=================
|
||||
|
||||
*Spack extensions* permit you to extend Spack capabilities by deploying your
|
||||
*Spack extensions* allow you to extend Spack capabilities by deploying your
|
||||
own custom commands or logic in an arbitrary location on your filesystem.
|
||||
This might be extremely useful e.g. to develop and maintain a command whose purpose is
|
||||
too specific to be considered for reintegration into the mainline or to
|
||||
evolve a command through its early stages before starting a discussion to merge
|
||||
it upstream.
|
||||
|
||||
From Spack's point of view an extension is any path in your filesystem which
|
||||
respects a prescribed naming and layout for files:
|
||||
respects the following naming and layout for files:
|
||||
|
||||
.. code-block:: console
|
||||
|
||||
spack-scripting/ # The top level directory must match the format 'spack-{extension_name}'
|
||||
├── pytest.ini # Optional file if the extension ships its own tests
|
||||
├── scripting # Folder that may contain modules that are needed for the extension commands
|
||||
│ └── cmd # Folder containing extension commands
|
||||
│ └── filter.py # A new command that will be available
|
||||
├── tests # Tests for this extension
|
||||
│ ├── cmd # Folder containing extension commands
|
||||
│ │ └── filter.py # A new command that will be available
|
||||
│ └── functions.py # Module with internal details
|
||||
└── tests # Tests for this extension
|
||||
│ ├── conftest.py
|
||||
│ └── test_filter.py
|
||||
└── templates # Templates that may be needed by the extension
|
||||
|
||||
In the example above the extension named *scripting* adds an additional command (``filter``)
|
||||
and unit tests to verify its behavior. The code for this example can be
|
||||
obtained by cloning the corresponding git repository:
|
||||
In the example above, the extension is named *scripting*. It adds an additional command
|
||||
(``spack filter``) and unit tests to verify its behavior.
|
||||
|
||||
.. TODO: write an ad-hoc "hello world" extension and make it part of the spack organization
|
||||
The extension can import any core Spack module in its implementation. When loaded by
|
||||
the ``spack`` command, the extension itself is imported as a Python package in the
|
||||
``spack.extensions`` namespace. In the example above, since the extension is named
|
||||
"scripting", the corresponding Python module is ``spack.extensions.scripting``.
|
||||
|
||||
The code for this example extension can be obtained by cloning the corresponding git repository:
|
||||
|
||||
.. code-block:: console
|
||||
|
||||
$ cd ~/
|
||||
$ mkdir tmp && cd tmp
|
||||
$ git clone https://github.com/alalazo/spack-scripting.git
|
||||
Cloning into 'spack-scripting'...
|
||||
remote: Counting objects: 11, done.
|
||||
remote: Compressing objects: 100% (7/7), done.
|
||||
remote: Total 11 (delta 0), reused 11 (delta 0), pack-reused 0
|
||||
Receiving objects: 100% (11/11), done.
|
||||
|
||||
As you can see by inspecting the sources, Python modules that are part of the extension
|
||||
can import any core Spack module.
|
||||
$ git -C /tmp clone https://github.com/spack/spack-scripting.git
|
||||
|
||||
---------------------------------
|
||||
Configure Spack to Use Extensions
|
||||
@@ -61,7 +57,7 @@ paths to ``config.yaml``. In the case of our example this means ensuring that:
|
||||
|
||||
config:
|
||||
extensions:
|
||||
- ~/tmp/spack-scripting
|
||||
- /tmp/spack-scripting
|
||||
|
||||
is part of your configuration file. Once this is setup any command that the extension provides
|
||||
will be available from the command line:
|
||||
@@ -86,37 +82,32 @@ will be available from the command line:
|
||||
--implicit select specs that are not installed or were installed implicitly
|
||||
--output OUTPUT where to dump the result
|
||||
|
||||
The corresponding unit tests can be run giving the appropriate options
|
||||
to ``spack unit-test``:
|
||||
The corresponding unit tests can be run giving the appropriate options to ``spack unit-test``:
|
||||
|
||||
.. code-block:: console
|
||||
|
||||
$ spack unit-test --extension=scripting
|
||||
|
||||
============================================================== test session starts ===============================================================
|
||||
platform linux2 -- Python 2.7.15rc1, pytest-3.2.5, py-1.4.34, pluggy-0.4.0
|
||||
rootdir: /home/mculpo/tmp/spack-scripting, inifile: pytest.ini
|
||||
========================================== test session starts ===========================================
|
||||
platform linux -- Python 3.11.5, pytest-7.4.3, pluggy-1.3.0
|
||||
rootdir: /home/culpo/github/spack-scripting
|
||||
configfile: pytest.ini
|
||||
testpaths: tests
|
||||
plugins: xdist-3.5.0
|
||||
collected 5 items
|
||||
|
||||
tests/test_filter.py ...XX
|
||||
============================================================ short test summary info =============================================================
|
||||
XPASS tests/test_filter.py::test_filtering_specs[flags3-specs3-expected3]
|
||||
XPASS tests/test_filter.py::test_filtering_specs[flags4-specs4-expected4]
|
||||
tests/test_filter.py ..... [100%]
|
||||
|
||||
=========================================================== slowest 20 test durations ============================================================
|
||||
3.74s setup tests/test_filter.py::test_filtering_specs[flags0-specs0-expected0]
|
||||
0.17s call tests/test_filter.py::test_filtering_specs[flags3-specs3-expected3]
|
||||
0.16s call tests/test_filter.py::test_filtering_specs[flags2-specs2-expected2]
|
||||
0.15s call tests/test_filter.py::test_filtering_specs[flags1-specs1-expected1]
|
||||
0.13s call tests/test_filter.py::test_filtering_specs[flags4-specs4-expected4]
|
||||
0.08s call tests/test_filter.py::test_filtering_specs[flags0-specs0-expected0]
|
||||
0.04s teardown tests/test_filter.py::test_filtering_specs[flags4-specs4-expected4]
|
||||
0.00s setup tests/test_filter.py::test_filtering_specs[flags4-specs4-expected4]
|
||||
0.00s setup tests/test_filter.py::test_filtering_specs[flags3-specs3-expected3]
|
||||
0.00s setup tests/test_filter.py::test_filtering_specs[flags1-specs1-expected1]
|
||||
0.00s setup tests/test_filter.py::test_filtering_specs[flags2-specs2-expected2]
|
||||
0.00s teardown tests/test_filter.py::test_filtering_specs[flags2-specs2-expected2]
|
||||
0.00s teardown tests/test_filter.py::test_filtering_specs[flags1-specs1-expected1]
|
||||
0.00s teardown tests/test_filter.py::test_filtering_specs[flags0-specs0-expected0]
|
||||
0.00s teardown tests/test_filter.py::test_filtering_specs[flags3-specs3-expected3]
|
||||
====================================================== 3 passed, 2 xpassed in 4.51 seconds =======================================================
|
||||
========================================== slowest 30 durations ==========================================
|
||||
2.31s setup tests/test_filter.py::test_filtering_specs[kwargs0-specs0-expected0]
|
||||
0.57s call tests/test_filter.py::test_filtering_specs[kwargs2-specs2-expected2]
|
||||
0.56s call tests/test_filter.py::test_filtering_specs[kwargs4-specs4-expected4]
|
||||
0.54s call tests/test_filter.py::test_filtering_specs[kwargs3-specs3-expected3]
|
||||
0.54s call tests/test_filter.py::test_filtering_specs[kwargs1-specs1-expected1]
|
||||
0.48s call tests/test_filter.py::test_filtering_specs[kwargs0-specs0-expected0]
|
||||
0.01s setup tests/test_filter.py::test_filtering_specs[kwargs4-specs4-expected4]
|
||||
0.01s setup tests/test_filter.py::test_filtering_specs[kwargs2-specs2-expected2]
|
||||
0.01s setup tests/test_filter.py::test_filtering_specs[kwargs1-specs1-expected1]
|
||||
0.01s setup tests/test_filter.py::test_filtering_specs[kwargs3-specs3-expected3]
|
||||
|
||||
(5 durations < 0.005s hidden. Use -vv to show these durations.)
|
||||
=========================================== 5 passed in 5.06s ============================================
|
||||
|
77
lib/spack/docs/frequently_asked_questions.rst
Normal file
77
lib/spack/docs/frequently_asked_questions.rst
Normal file
@@ -0,0 +1,77 @@
|
||||
.. Copyright 2013-2023 Lawrence Livermore National Security, LLC and other
|
||||
Spack Project Developers. See the top-level COPYRIGHT file for details.
|
||||
|
||||
SPDX-License-Identifier: (Apache-2.0 OR MIT)
|
||||
|
||||
==========================
|
||||
Frequently Asked Questions
|
||||
==========================
|
||||
|
||||
This page contains answers to frequently asked questions about Spack.
|
||||
If you have questions that are not answered here, feel free to ask on
|
||||
`Slack <https://slack.spack.io>`_ or `GitHub Discussions
|
||||
<https://github.com/spack/spack/discussions>`_. If you've learned the
|
||||
answer to a question that you think should be here, please consider
|
||||
contributing to this page.
|
||||
|
||||
.. _faq-concretizer-precedence:
|
||||
|
||||
-----------------------------------------------------
|
||||
Why does Spack pick particular versions and variants?
|
||||
-----------------------------------------------------
|
||||
|
||||
This question comes up in a variety of forms:
|
||||
|
||||
1. Why does Spack seem to ignore my package preferences from ``packages.yaml`` config?
|
||||
2. Why does Spack toggle a variant instead of using the default from the ``package.py`` file?
|
||||
|
||||
The short answer is that Spack always picks an optimal configuration
|
||||
based on a complex set of criteria\ [#f1]_. These criteria are more nuanced
|
||||
than always choosing the latest versions or default variants.
|
||||
|
||||
.. note::
|
||||
|
||||
As a rule of thumb: requirements + constraints > reuse > preferences > defaults.
|
||||
|
||||
The following set of criteria (from lowest to highest precedence) explain
|
||||
common cases where concretization output may seem surprising at first.
|
||||
|
||||
1. :ref:`Package preferences <package-preferences>` configured in ``packages.yaml``
|
||||
override variant defaults from ``package.py`` files, and influence the optimal
|
||||
ordering of versions. Preferences are specified as follows:
|
||||
|
||||
.. code-block:: yaml
|
||||
|
||||
packages:
|
||||
foo:
|
||||
version: [1.0, 1.1]
|
||||
variants: ~mpi
|
||||
|
||||
2. :ref:`Reuse concretization <concretizer-options>` configured in ``concretizer.yaml``
|
||||
overrides preferences, since it's typically faster to reuse an existing spec than to
|
||||
build a preferred one from sources. When build caches are enabled, specs may be reused
|
||||
from a remote location too. Reuse concretization is configured as follows:
|
||||
|
||||
.. code-block:: yaml
|
||||
|
||||
concretizer:
|
||||
reuse: dependencies # other options are 'true' and 'false'
|
||||
|
||||
3. :ref:`Package requirements <package-requirements>` configured in ``packages.yaml``,
|
||||
and constraints from the command line as well as ``package.py`` files override all
|
||||
of the above. Requirements are specified as follows:
|
||||
|
||||
.. code-block:: yaml
|
||||
|
||||
packages:
|
||||
foo:
|
||||
require:
|
||||
- "@1.2: +mpi"
|
||||
|
||||
Requirements and constraints restrict the set of possible solutions, while reuse
|
||||
behavior and preferences influence what an optimal solution looks like.
|
||||
|
||||
|
||||
.. rubric:: Footnotes
|
||||
|
||||
.. [#f1] The exact list of criteria can be retrieved with the ``spack solve`` command
|
@@ -111,3 +111,28 @@ CUDA is split into fewer components and is simpler to specify:
|
||||
prefix: /opt/cuda/cuda-11.0.2/
|
||||
|
||||
where ``/opt/cuda/cuda-11.0.2/lib/`` contains ``libcudart.so``.
|
||||
|
||||
|
||||
|
||||
-----------------------------------
|
||||
Using an External OpenGL API
|
||||
-----------------------------------
|
||||
Depending on whether we have a graphics card or not, we may choose to use OSMesa or GLX to implement the OpenGL API.
|
||||
|
||||
If a graphics card is unavailable, OSMesa is recommended and can typically be built with Spack.
|
||||
However, if we prefer to utilize the system GLX tailored to our graphics card, we need to declare it as an external. Here's how to do it:
|
||||
|
||||
|
||||
.. code-block:: yaml
|
||||
|
||||
packages:
|
||||
libglx:
|
||||
require: [opengl]
|
||||
opengl:
|
||||
buildable: false
|
||||
externals:
|
||||
- prefix: /usr/
|
||||
spec: opengl@4.6
|
||||
|
||||
Note that prefix has to be the root of both the libraries and the headers, using is /usr not the path the the lib.
|
||||
To know which spec for opengl is available use ``cd /usr/include/GL && grep -Ri gl_version``.
|
||||
|
@@ -55,6 +55,7 @@ or refer to the full manual below.
|
||||
getting_started
|
||||
basic_usage
|
||||
replace_conda_homebrew
|
||||
frequently_asked_questions
|
||||
|
||||
.. toctree::
|
||||
:maxdepth: 2
|
||||
@@ -70,7 +71,7 @@ or refer to the full manual below.
|
||||
|
||||
configuration
|
||||
config_yaml
|
||||
bootstrapping
|
||||
packages_yaml
|
||||
build_settings
|
||||
environments
|
||||
containers
|
||||
@@ -78,6 +79,7 @@ or refer to the full manual below.
|
||||
module_file_support
|
||||
repositories
|
||||
binary_caches
|
||||
bootstrapping
|
||||
command_index
|
||||
chain
|
||||
extensions
|
||||
|
591
lib/spack/docs/packages_yaml.rst
Normal file
591
lib/spack/docs/packages_yaml.rst
Normal file
@@ -0,0 +1,591 @@
|
||||
.. Copyright 2013-2023 Lawrence Livermore National Security, LLC and other
|
||||
Spack Project Developers. See the top-level COPYRIGHT file for details.
|
||||
|
||||
SPDX-License-Identifier: (Apache-2.0 OR MIT)
|
||||
|
||||
|
||||
.. _packages-config:
|
||||
|
||||
================================
|
||||
Package Settings (packages.yaml)
|
||||
================================
|
||||
|
||||
Spack allows you to customize how your software is built through the
|
||||
``packages.yaml`` file. Using it, you can make Spack prefer particular
|
||||
implementations of virtual dependencies (e.g., MPI or BLAS/LAPACK),
|
||||
or you can make it prefer to build with particular compilers. You can
|
||||
also tell Spack to use *external* software installations already
|
||||
present on your system.
|
||||
|
||||
At a high level, the ``packages.yaml`` file is structured like this:
|
||||
|
||||
.. code-block:: yaml
|
||||
|
||||
packages:
|
||||
package1:
|
||||
# settings for package1
|
||||
package2:
|
||||
# settings for package2
|
||||
# ...
|
||||
all:
|
||||
# settings that apply to all packages.
|
||||
|
||||
So you can either set build preferences specifically for *one* package,
|
||||
or you can specify that certain settings should apply to *all* packages.
|
||||
The types of settings you can customize are described in detail below.
|
||||
|
||||
Spack's build defaults are in the default
|
||||
``etc/spack/defaults/packages.yaml`` file. You can override them in
|
||||
``~/.spack/packages.yaml`` or ``etc/spack/packages.yaml``. For more
|
||||
details on how this works, see :ref:`configuration-scopes`.
|
||||
|
||||
.. _sec-external-packages:
|
||||
|
||||
-----------------
|
||||
External Packages
|
||||
-----------------
|
||||
|
||||
Spack can be configured to use externally-installed
|
||||
packages rather than building its own packages. This may be desirable
|
||||
if machines ship with system packages, such as a customized MPI
|
||||
that should be used instead of Spack building its own MPI.
|
||||
|
||||
External packages are configured through the ``packages.yaml`` file.
|
||||
Here's an example of an external configuration:
|
||||
|
||||
.. code-block:: yaml
|
||||
|
||||
packages:
|
||||
openmpi:
|
||||
externals:
|
||||
- spec: "openmpi@1.4.3%gcc@4.4.7 arch=linux-debian7-x86_64"
|
||||
prefix: /opt/openmpi-1.4.3
|
||||
- spec: "openmpi@1.4.3%gcc@4.4.7 arch=linux-debian7-x86_64+debug"
|
||||
prefix: /opt/openmpi-1.4.3-debug
|
||||
- spec: "openmpi@1.6.5%intel@10.1 arch=linux-debian7-x86_64"
|
||||
prefix: /opt/openmpi-1.6.5-intel
|
||||
|
||||
This example lists three installations of OpenMPI, one built with GCC,
|
||||
one built with GCC and debug information, and another built with Intel.
|
||||
If Spack is asked to build a package that uses one of these MPIs as a
|
||||
dependency, it will use the pre-installed OpenMPI in
|
||||
the given directory. Note that the specified path is the top-level
|
||||
install prefix, not the ``bin`` subdirectory.
|
||||
|
||||
``packages.yaml`` can also be used to specify modules to load instead
|
||||
of the installation prefixes. The following example says that module
|
||||
``CMake/3.7.2`` provides cmake version 3.7.2.
|
||||
|
||||
.. code-block:: yaml
|
||||
|
||||
cmake:
|
||||
externals:
|
||||
- spec: cmake@3.7.2
|
||||
modules:
|
||||
- CMake/3.7.2
|
||||
|
||||
Each ``packages.yaml`` begins with a ``packages:`` attribute, followed
|
||||
by a list of package names. To specify externals, add an ``externals:``
|
||||
attribute under the package name, which lists externals.
|
||||
Each external should specify a ``spec:`` string that should be as
|
||||
well-defined as reasonably possible. If a
|
||||
package lacks a spec component, such as missing a compiler or
|
||||
package version, then Spack will guess the missing component based
|
||||
on its most-favored packages, and it may guess incorrectly.
|
||||
|
||||
Each package version and compiler listed in an external should
|
||||
have entries in Spack's packages and compiler configuration, even
|
||||
though the package and compiler may not ever be built.
|
||||
|
||||
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
|
||||
Prevent packages from being built from sources
|
||||
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
|
||||
|
||||
Adding an external spec in ``packages.yaml`` allows Spack to use an external location,
|
||||
but it does not prevent Spack from building packages from sources. In the above example,
|
||||
Spack might choose for many valid reasons to start building and linking with the
|
||||
latest version of OpenMPI rather than continue using the pre-installed OpenMPI versions.
|
||||
|
||||
To prevent this, the ``packages.yaml`` configuration also allows packages
|
||||
to be flagged as non-buildable. The previous example could be modified to
|
||||
be:
|
||||
|
||||
.. code-block:: yaml
|
||||
|
||||
packages:
|
||||
openmpi:
|
||||
externals:
|
||||
- spec: "openmpi@1.4.3%gcc@4.4.7 arch=linux-debian7-x86_64"
|
||||
prefix: /opt/openmpi-1.4.3
|
||||
- spec: "openmpi@1.4.3%gcc@4.4.7 arch=linux-debian7-x86_64+debug"
|
||||
prefix: /opt/openmpi-1.4.3-debug
|
||||
- spec: "openmpi@1.6.5%intel@10.1 arch=linux-debian7-x86_64"
|
||||
prefix: /opt/openmpi-1.6.5-intel
|
||||
buildable: False
|
||||
|
||||
The addition of the ``buildable`` flag tells Spack that it should never build
|
||||
its own version of OpenMPI from sources, and it will instead always rely on a pre-built
|
||||
OpenMPI.
|
||||
|
||||
.. note::
|
||||
|
||||
If ``concretizer:reuse`` is on (see :ref:`concretizer-options` for more information on that flag)
|
||||
pre-built specs include specs already available from a local store, an upstream store, a registered
|
||||
buildcache or specs marked as externals in ``packages.yaml``. If ``concretizer:reuse`` is off, only
|
||||
external specs in ``packages.yaml`` are included in the list of pre-built specs.
|
||||
|
||||
If an external module is specified as not buildable, then Spack will load the
|
||||
external module into the build environment which can be used for linking.
|
||||
|
||||
The ``buildable`` does not need to be paired with external packages.
|
||||
It could also be used alone to forbid packages that may be
|
||||
buggy or otherwise undesirable.
|
||||
|
||||
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
|
||||
Non-buildable virtual packages
|
||||
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
|
||||
|
||||
Virtual packages in Spack can also be specified as not buildable, and
|
||||
external implementations can be provided. In the example above,
|
||||
OpenMPI is configured as not buildable, but Spack will often prefer
|
||||
other MPI implementations over the externally available OpenMPI. Spack
|
||||
can be configured with every MPI provider not buildable individually,
|
||||
but more conveniently:
|
||||
|
||||
.. code-block:: yaml
|
||||
|
||||
packages:
|
||||
mpi:
|
||||
buildable: False
|
||||
openmpi:
|
||||
externals:
|
||||
- spec: "openmpi@1.4.3%gcc@4.4.7 arch=linux-debian7-x86_64"
|
||||
prefix: /opt/openmpi-1.4.3
|
||||
- spec: "openmpi@1.4.3%gcc@4.4.7 arch=linux-debian7-x86_64+debug"
|
||||
prefix: /opt/openmpi-1.4.3-debug
|
||||
- spec: "openmpi@1.6.5%intel@10.1 arch=linux-debian7-x86_64"
|
||||
prefix: /opt/openmpi-1.6.5-intel
|
||||
|
||||
Spack can then use any of the listed external implementations of MPI
|
||||
to satisfy a dependency, and will choose depending on the compiler and
|
||||
architecture.
|
||||
|
||||
In cases where the concretizer is configured to reuse specs, and other ``mpi`` providers
|
||||
(available via stores or buildcaches) are not wanted, Spack can be configured to require
|
||||
specs matching only the available externals:
|
||||
|
||||
.. code-block:: yaml
|
||||
|
||||
packages:
|
||||
mpi:
|
||||
buildable: False
|
||||
require:
|
||||
- one_of: [
|
||||
"openmpi@1.4.3%gcc@4.4.7 arch=linux-debian7-x86_64",
|
||||
"openmpi@1.4.3%gcc@4.4.7 arch=linux-debian7-x86_64+debug",
|
||||
"openmpi@1.6.5%intel@10.1 arch=linux-debian7-x86_64"
|
||||
]
|
||||
openmpi:
|
||||
externals:
|
||||
- spec: "openmpi@1.4.3%gcc@4.4.7 arch=linux-debian7-x86_64"
|
||||
prefix: /opt/openmpi-1.4.3
|
||||
- spec: "openmpi@1.4.3%gcc@4.4.7 arch=linux-debian7-x86_64+debug"
|
||||
prefix: /opt/openmpi-1.4.3-debug
|
||||
- spec: "openmpi@1.6.5%intel@10.1 arch=linux-debian7-x86_64"
|
||||
prefix: /opt/openmpi-1.6.5-intel
|
||||
|
||||
This configuration prevents any spec using MPI and originating from stores or buildcaches to be reused,
|
||||
unless it matches the requirements under ``packages:mpi:require``. For more information on requirements see
|
||||
:ref:`package-requirements`.
|
||||
|
||||
.. _cmd-spack-external-find:
|
||||
|
||||
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
|
||||
Automatically Find External Packages
|
||||
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
|
||||
|
||||
You can run the :ref:`spack external find <spack-external-find>` command
|
||||
to search for system-provided packages and add them to ``packages.yaml``.
|
||||
After running this command your ``packages.yaml`` may include new entries:
|
||||
|
||||
.. code-block:: yaml
|
||||
|
||||
packages:
|
||||
cmake:
|
||||
externals:
|
||||
- spec: cmake@3.17.2
|
||||
prefix: /usr
|
||||
|
||||
Generally this is useful for detecting a small set of commonly-used packages;
|
||||
for now this is generally limited to finding build-only dependencies.
|
||||
Specific limitations include:
|
||||
|
||||
* Packages are not discoverable by default: For a package to be
|
||||
discoverable with ``spack external find``, it needs to add special
|
||||
logic. See :ref:`here <make-package-findable>` for more details.
|
||||
* The logic does not search through module files, it can only detect
|
||||
packages with executables defined in ``PATH``; you can help Spack locate
|
||||
externals which use module files by loading any associated modules for
|
||||
packages that you want Spack to know about before running
|
||||
``spack external find``.
|
||||
* Spack does not overwrite existing entries in the package configuration:
|
||||
If there is an external defined for a spec at any configuration scope,
|
||||
then Spack will not add a new external entry (``spack config blame packages``
|
||||
can help locate all external entries).
|
||||
|
||||
.. _package-requirements:
|
||||
|
||||
--------------------
|
||||
Package Requirements
|
||||
--------------------
|
||||
|
||||
Spack can be configured to always use certain compilers, package
|
||||
versions, and variants during concretization through package
|
||||
requirements.
|
||||
|
||||
Package requirements are useful when you find yourself repeatedly
|
||||
specifying the same constraints on the command line, and wish that
|
||||
Spack respects these constraints whether you mention them explicitly
|
||||
or not. Another use case is specifying constraints that should apply
|
||||
to all root specs in an environment, without having to repeat the
|
||||
constraint everywhere.
|
||||
|
||||
Apart from that, requirements config is more flexible than constraints
|
||||
on the command line, because it can specify constraints on packages
|
||||
*when they occur* as a dependency. In contrast, on the command line it
|
||||
is not possible to specify constraints on dependencies while also keeping
|
||||
those dependencies optional.
|
||||
|
||||
.. seealso::
|
||||
|
||||
FAQ: :ref:`Why does Spack pick particular versions and variants? <faq-concretizer-precedence>`
|
||||
|
||||
|
||||
^^^^^^^^^^^^^^^^^^^
|
||||
Requirements syntax
|
||||
^^^^^^^^^^^^^^^^^^^
|
||||
|
||||
The package requirements configuration is specified in ``packages.yaml``,
|
||||
keyed by package name and expressed using the Spec syntax. In the simplest
|
||||
case you can specify attributes that you always want the package to have
|
||||
by providing a single spec string to ``require``:
|
||||
|
||||
.. code-block:: yaml
|
||||
|
||||
packages:
|
||||
libfabric:
|
||||
require: "@1.13.2"
|
||||
|
||||
In the above example, ``libfabric`` will always build with version 1.13.2. If you
|
||||
need to compose multiple configuration scopes ``require`` accepts a list of
|
||||
strings:
|
||||
|
||||
.. code-block:: yaml
|
||||
|
||||
packages:
|
||||
libfabric:
|
||||
require:
|
||||
- "@1.13.2"
|
||||
- "%gcc"
|
||||
|
||||
In this case ``libfabric`` will always build with version 1.13.2 **and** using GCC
|
||||
as a compiler.
|
||||
|
||||
For more complex use cases, require accepts also a list of objects. These objects
|
||||
must have either a ``any_of`` or a ``one_of`` field, containing a list of spec strings,
|
||||
and they can optionally have a ``when`` and a ``message`` attribute:
|
||||
|
||||
.. code-block:: yaml
|
||||
|
||||
packages:
|
||||
openmpi:
|
||||
require:
|
||||
- any_of: ["@4.1.5", "%gcc"]
|
||||
message: "in this example only 4.1.5 can build with other compilers"
|
||||
|
||||
``any_of`` is a list of specs. One of those specs must be satisfied
|
||||
and it is also allowed for the concretized spec to match more than one.
|
||||
In the above example, that means you could build ``openmpi@4.1.5%gcc``,
|
||||
``openmpi@4.1.5%clang`` or ``openmpi@3.9%gcc``, but
|
||||
not ``openmpi@3.9%clang``.
|
||||
|
||||
If a custom message is provided, and the requirement is not satisfiable,
|
||||
Spack will print the custom error message:
|
||||
|
||||
.. code-block:: console
|
||||
|
||||
$ spack spec openmpi@3.9%clang
|
||||
==> Error: in this example only 4.1.5 can build with other compilers
|
||||
|
||||
We could express a similar requirement using the ``when`` attribute:
|
||||
|
||||
.. code-block:: yaml
|
||||
|
||||
packages:
|
||||
openmpi:
|
||||
require:
|
||||
- any_of: ["%gcc"]
|
||||
when: "@:4.1.4"
|
||||
message: "in this example only 4.1.5 can build with other compilers"
|
||||
|
||||
In the example above, if the version turns out to be 4.1.4 or less, we require the compiler to be GCC.
|
||||
For readability, Spack also allows a ``spec`` key accepting a string when there is only a single
|
||||
constraint:
|
||||
|
||||
.. code-block:: yaml
|
||||
|
||||
packages:
|
||||
openmpi:
|
||||
require:
|
||||
- spec: "%gcc"
|
||||
when: "@:4.1.4"
|
||||
message: "in this example only 4.1.5 can build with other compilers"
|
||||
|
||||
This code snippet and the one before it are semantically equivalent.
|
||||
|
||||
Finally, instead of ``any_of`` you can use ``one_of`` which also takes a list of specs. The final
|
||||
concretized spec must match one and only one of them:
|
||||
|
||||
.. code-block:: yaml
|
||||
|
||||
packages:
|
||||
mpich:
|
||||
require:
|
||||
- one_of: ["+cuda", "+rocm"]
|
||||
|
||||
In the example above, that means you could build ``mpich+cuda`` or ``mpich+rocm`` but not ``mpich+cuda+rocm``.
|
||||
|
||||
.. note::
|
||||
|
||||
For ``any_of`` and ``one_of``, the order of specs indicates a
|
||||
preference: items that appear earlier in the list are preferred
|
||||
(note that these preferences can be ignored in favor of others).
|
||||
|
||||
.. note::
|
||||
|
||||
When using a conditional requirement, Spack is allowed to actively avoid the triggering
|
||||
condition (the ``when=...`` spec) if that leads to a concrete spec with better scores in
|
||||
the optimization criteria. To check the current optimization criteria and their
|
||||
priorities you can run ``spack solve zlib``.
|
||||
|
||||
^^^^^^^^^^^^^^^^^^^^^^^^^^^^
|
||||
Setting default requirements
|
||||
^^^^^^^^^^^^^^^^^^^^^^^^^^^^
|
||||
|
||||
You can also set default requirements for all packages under ``all``
|
||||
like this:
|
||||
|
||||
.. code-block:: yaml
|
||||
|
||||
packages:
|
||||
all:
|
||||
require: '%clang'
|
||||
|
||||
which means every spec will be required to use ``clang`` as a compiler.
|
||||
|
||||
Requirements on variants for all packages are possible too, but note that they
|
||||
are only enforced for those packages that define these variants, otherwise they
|
||||
are disregarded. For example:
|
||||
|
||||
.. code-block:: yaml
|
||||
|
||||
packages:
|
||||
all:
|
||||
require:
|
||||
- "+shared"
|
||||
- "+cuda"
|
||||
|
||||
will just enforce ``+shared`` on ``zlib``, which has a boolean ``shared`` variant but
|
||||
no ``cuda`` variant.
|
||||
|
||||
Constraints in a single spec literal are always considered as a whole, so in a case like:
|
||||
|
||||
.. code-block:: yaml
|
||||
|
||||
packages:
|
||||
all:
|
||||
require: "+shared +cuda"
|
||||
|
||||
the default requirement will be enforced only if a package has both a ``cuda`` and
|
||||
a ``shared`` variant, and will never be partially enforced.
|
||||
|
||||
Finally, ``all`` represents a *default set of requirements* -
|
||||
if there are specific package requirements, then the default requirements
|
||||
under ``all`` are disregarded. For example, with a configuration like this:
|
||||
|
||||
.. code-block:: yaml
|
||||
|
||||
packages:
|
||||
all:
|
||||
require:
|
||||
- 'build_type=Debug'
|
||||
- '%clang'
|
||||
cmake:
|
||||
require:
|
||||
- 'build_type=Debug'
|
||||
- '%gcc'
|
||||
|
||||
Spack requires ``cmake`` to use ``gcc`` and all other nodes (including ``cmake``
|
||||
dependencies) to use ``clang``. If enforcing ``build_type=Debug`` is needed also
|
||||
on ``cmake``, it must be repeated in the specific ``cmake`` requirements.
|
||||
|
||||
|
||||
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
|
||||
Setting requirements on virtual specs
|
||||
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
|
||||
|
||||
A requirement on a virtual spec applies whenever that virtual is present in the DAG.
|
||||
This can be useful for fixing which virtual provider you want to use:
|
||||
|
||||
.. code-block:: yaml
|
||||
|
||||
packages:
|
||||
mpi:
|
||||
require: 'mvapich2 %gcc'
|
||||
|
||||
With the configuration above the only allowed ``mpi`` provider is ``mvapich2 %gcc``.
|
||||
|
||||
Requirements on the virtual spec and on the specific provider are both applied, if
|
||||
present. For instance with a configuration like:
|
||||
|
||||
.. code-block:: yaml
|
||||
|
||||
packages:
|
||||
mpi:
|
||||
require: 'mvapich2 %gcc'
|
||||
mvapich2:
|
||||
require: '~cuda'
|
||||
|
||||
you will use ``mvapich2~cuda %gcc`` as an ``mpi`` provider.
|
||||
|
||||
.. _package-preferences:
|
||||
|
||||
-------------------
|
||||
Package Preferences
|
||||
-------------------
|
||||
|
||||
In some cases package requirements can be too strong, and package
|
||||
preferences are the better option. Package preferences do not impose
|
||||
constraints on packages for particular versions or variants values,
|
||||
they rather only set defaults. The concretizer is free to change
|
||||
them if it must, due to other constraints, and also prefers reusing
|
||||
installed packages over building new ones that are a better match for
|
||||
preferences.
|
||||
|
||||
.. seealso::
|
||||
|
||||
FAQ: :ref:`Why does Spack pick particular versions and variants? <faq-concretizer-precedence>`
|
||||
|
||||
|
||||
Most package preferences (``compilers``, ``target`` and ``providers``)
|
||||
can only be set globally under the ``all`` section of ``packages.yaml``:
|
||||
|
||||
.. code-block:: yaml
|
||||
|
||||
packages:
|
||||
all:
|
||||
compiler: [gcc@12.2.0, clang@12:, oneapi@2023:]
|
||||
target: [x86_64_v3]
|
||||
providers:
|
||||
mpi: [mvapich2, mpich, openmpi]
|
||||
|
||||
These preferences override Spack's default and effectively reorder priorities
|
||||
when looking for the best compiler, target or virtual package provider. Each
|
||||
preference takes an ordered list of spec constraints, with earlier entries in
|
||||
the list being preferred over later entries.
|
||||
|
||||
In the example above all packages prefer to be compiled with ``gcc@12.2.0``,
|
||||
to target the ``x86_64_v3`` microarchitecture and to use ``mvapich2`` if they
|
||||
depend on ``mpi``.
|
||||
|
||||
The ``variants`` and ``version`` preferences can be set under
|
||||
package specific sections of the ``packages.yaml`` file:
|
||||
|
||||
.. code-block:: yaml
|
||||
|
||||
packages:
|
||||
opencv:
|
||||
variants: +debug
|
||||
gperftools:
|
||||
version: [2.2, 2.4, 2.3]
|
||||
|
||||
In this case, the preference for ``opencv`` is to build with debug options, while
|
||||
``gperftools`` prefers version 2.2 over 2.4.
|
||||
|
||||
Any preference can be overwritten on the command line if explicitly requested.
|
||||
|
||||
Preferences cannot overcome explicit constraints, as they only set a preferred
|
||||
ordering among homogeneous attribute values. Going back to the example, if
|
||||
``gperftools@2.3:`` was requested, then Spack will install version 2.4
|
||||
since the most preferred version 2.2 is prohibited by the version constraint.
|
||||
|
||||
.. _package_permissions:
|
||||
|
||||
-------------------
|
||||
Package Permissions
|
||||
-------------------
|
||||
|
||||
Spack can be configured to assign permissions to the files installed
|
||||
by a package.
|
||||
|
||||
In the ``packages.yaml`` file under ``permissions``, the attributes
|
||||
``read``, ``write``, and ``group`` control the package
|
||||
permissions. These attributes can be set per-package, or for all
|
||||
packages under ``all``. If permissions are set under ``all`` and for a
|
||||
specific package, the package-specific settings take precedence.
|
||||
|
||||
The ``read`` and ``write`` attributes take one of ``user``, ``group``,
|
||||
and ``world``.
|
||||
|
||||
.. code-block:: yaml
|
||||
|
||||
packages:
|
||||
all:
|
||||
permissions:
|
||||
write: group
|
||||
group: spack
|
||||
my_app:
|
||||
permissions:
|
||||
read: group
|
||||
group: my_team
|
||||
|
||||
The permissions settings describe the broadest level of access to
|
||||
installations of the specified packages. The execute permissions of
|
||||
the file are set to the same level as read permissions for those files
|
||||
that are executable. The default setting for ``read`` is ``world``,
|
||||
and for ``write`` is ``user``. In the example above, installations of
|
||||
``my_app`` will be installed with user and group permissions but no
|
||||
world permissions, and owned by the group ``my_team``. All other
|
||||
packages will be installed with user and group write privileges, and
|
||||
world read privileges. Those packages will be owned by the group
|
||||
``spack``.
|
||||
|
||||
The ``group`` attribute assigns a Unix-style group to a package. All
|
||||
files installed by the package will be owned by the assigned group,
|
||||
and the sticky group bit will be set on the install prefix and all
|
||||
directories inside the install prefix. This will ensure that even
|
||||
manually placed files within the install prefix are owned by the
|
||||
assigned group. If no group is assigned, Spack will allow the OS
|
||||
default behavior to go as expected.
|
||||
|
||||
----------------------------
|
||||
Assigning Package Attributes
|
||||
----------------------------
|
||||
|
||||
You can assign class-level attributes in the configuration:
|
||||
|
||||
.. code-block:: yaml
|
||||
|
||||
packages:
|
||||
mpileaks:
|
||||
# Override existing attributes
|
||||
url: http://www.somewhereelse.com/mpileaks-1.0.tar.gz
|
||||
# ... or add new ones
|
||||
x: 1
|
||||
|
||||
Attributes set this way will be accessible to any method executed
|
||||
in the package.py file (e.g. the ``install()`` method). Values for these
|
||||
attributes may be any value parseable by yaml.
|
||||
|
||||
These can only be applied to specific packages, not "all" or
|
||||
virtual packages.
|
@@ -2337,7 +2337,7 @@ window while a batch job is running ``spack install`` on the same or
|
||||
overlapping dependencies without any process trying to re-do the work of
|
||||
another.
|
||||
|
||||
For example, if you are using SLURM, you could launch an installation
|
||||
For example, if you are using Slurm, you could launch an installation
|
||||
of ``mpich`` using the following command:
|
||||
|
||||
.. code-block:: console
|
||||
|
@@ -1,13 +1,13 @@
|
||||
sphinx==7.2.6
|
||||
sphinxcontrib-programoutput==0.17
|
||||
sphinx_design==0.5.0
|
||||
sphinx-rtd-theme==1.3.0
|
||||
sphinx-rtd-theme==2.0.0
|
||||
python-levenshtein==0.23.0
|
||||
docutils==0.18.1
|
||||
pygments==2.16.1
|
||||
urllib3==2.0.7
|
||||
docutils==0.20.1
|
||||
pygments==2.17.2
|
||||
urllib3==2.1.0
|
||||
pytest==7.4.3
|
||||
isort==5.12.0
|
||||
black==23.10.1
|
||||
black==23.11.0
|
||||
flake8==6.1.0
|
||||
mypy==1.6.1
|
||||
mypy==1.7.1
|
||||
|
@@ -1047,9 +1047,9 @@ def __bool__(self):
|
||||
"""Whether any exceptions were handled."""
|
||||
return bool(self.exceptions)
|
||||
|
||||
def forward(self, context: str) -> "GroupedExceptionForwarder":
|
||||
def forward(self, context: str, base: type = BaseException) -> "GroupedExceptionForwarder":
|
||||
"""Return a contextmanager which extracts tracebacks and prefixes a message."""
|
||||
return GroupedExceptionForwarder(context, self)
|
||||
return GroupedExceptionForwarder(context, self, base)
|
||||
|
||||
def _receive_forwarded(self, context: str, exc: Exception, tb: List[str]):
|
||||
self.exceptions.append((context, exc, tb))
|
||||
@@ -1072,15 +1072,18 @@ class GroupedExceptionForwarder:
|
||||
"""A contextmanager to capture exceptions and forward them to a
|
||||
GroupedExceptionHandler."""
|
||||
|
||||
def __init__(self, context: str, handler: GroupedExceptionHandler):
|
||||
def __init__(self, context: str, handler: GroupedExceptionHandler, base: type):
|
||||
self._context = context
|
||||
self._handler = handler
|
||||
self._base = base
|
||||
|
||||
def __enter__(self):
|
||||
return None
|
||||
|
||||
def __exit__(self, exc_type, exc_value, tb):
|
||||
if exc_value is not None:
|
||||
if not issubclass(exc_type, self._base):
|
||||
return False
|
||||
self._handler._receive_forwarded(self._context, exc_value, traceback.format_tb(tb))
|
||||
|
||||
# Suppress any exception from being re-raised:
|
||||
|
@@ -40,6 +40,7 @@ def _search_duplicate_compilers(error_cls):
|
||||
import collections.abc
|
||||
import glob
|
||||
import inspect
|
||||
import io
|
||||
import itertools
|
||||
import pathlib
|
||||
import pickle
|
||||
@@ -54,6 +55,7 @@ def _search_duplicate_compilers(error_cls):
|
||||
import spack.repo
|
||||
import spack.spec
|
||||
import spack.util.crypto
|
||||
import spack.util.spack_yaml as syaml
|
||||
import spack.variant
|
||||
|
||||
#: Map an audit tag to a list of callables implementing checks
|
||||
@@ -250,6 +252,88 @@ def _search_duplicate_specs_in_externals(error_cls):
|
||||
return errors
|
||||
|
||||
|
||||
@config_packages
|
||||
def _deprecated_preferences(error_cls):
|
||||
"""Search package preferences deprecated in v0.21 (and slated for removal in v0.22)"""
|
||||
# TODO (v0.22): remove this audit as the attributes will not be allowed in config
|
||||
errors = []
|
||||
packages_yaml = spack.config.CONFIG.get_config("packages")
|
||||
|
||||
def make_error(attribute_name, config_data, summary):
|
||||
s = io.StringIO()
|
||||
s.write("Occurring in the following file:\n")
|
||||
dict_view = syaml.syaml_dict((k, v) for k, v in config_data.items() if k == attribute_name)
|
||||
syaml.dump_config(dict_view, stream=s, blame=True)
|
||||
return error_cls(summary=summary, details=[s.getvalue()])
|
||||
|
||||
if "all" in packages_yaml and "version" in packages_yaml["all"]:
|
||||
summary = "Using the deprecated 'version' attribute under 'packages:all'"
|
||||
errors.append(make_error("version", packages_yaml["all"], summary))
|
||||
|
||||
for package_name in packages_yaml:
|
||||
if package_name == "all":
|
||||
continue
|
||||
|
||||
package_conf = packages_yaml[package_name]
|
||||
for attribute in ("compiler", "providers", "target"):
|
||||
if attribute not in package_conf:
|
||||
continue
|
||||
summary = (
|
||||
f"Using the deprecated '{attribute}' attribute " f"under 'packages:{package_name}'"
|
||||
)
|
||||
errors.append(make_error(attribute, package_conf, summary))
|
||||
|
||||
return errors
|
||||
|
||||
|
||||
@config_packages
|
||||
def _avoid_mismatched_variants(error_cls):
|
||||
"""Warns if variant preferences have mismatched types or names."""
|
||||
errors = []
|
||||
packages_yaml = spack.config.CONFIG.get_config("packages")
|
||||
|
||||
def make_error(config_data, summary):
|
||||
s = io.StringIO()
|
||||
s.write("Occurring in the following file:\n")
|
||||
syaml.dump_config(config_data, stream=s, blame=True)
|
||||
return error_cls(summary=summary, details=[s.getvalue()])
|
||||
|
||||
for pkg_name in packages_yaml:
|
||||
# 'all:' must be more forgiving, since it is setting defaults for everything
|
||||
if pkg_name == "all" or "variants" not in packages_yaml[pkg_name]:
|
||||
continue
|
||||
|
||||
preferences = packages_yaml[pkg_name]["variants"]
|
||||
if not isinstance(preferences, list):
|
||||
preferences = [preferences]
|
||||
|
||||
for variants in preferences:
|
||||
current_spec = spack.spec.Spec(variants)
|
||||
pkg_cls = spack.repo.PATH.get_pkg_class(pkg_name)
|
||||
for variant in current_spec.variants.values():
|
||||
# Variant does not exist at all
|
||||
if variant.name not in pkg_cls.variants:
|
||||
summary = (
|
||||
f"Setting a preference for the '{pkg_name}' package to the "
|
||||
f"non-existing variant '{variant.name}'"
|
||||
)
|
||||
errors.append(make_error(preferences, summary))
|
||||
continue
|
||||
|
||||
# Variant cannot accept this value
|
||||
s = spack.spec.Spec(pkg_name)
|
||||
try:
|
||||
s.update_variant_validate(variant.name, variant.value)
|
||||
except Exception:
|
||||
summary = (
|
||||
f"Setting the variant '{variant.name}' of the '{pkg_name}' package "
|
||||
f"to the invalid value '{str(variant)}'"
|
||||
)
|
||||
errors.append(make_error(preferences, summary))
|
||||
|
||||
return errors
|
||||
|
||||
|
||||
#: Sanity checks on package directives
|
||||
package_directives = AuditClass(
|
||||
group="packages",
|
||||
@@ -642,13 +726,37 @@ def _unknown_variants_in_directives(pkgs, error_cls):
|
||||
|
||||
|
||||
@package_directives
|
||||
def _unknown_variants_in_dependencies(pkgs, error_cls):
|
||||
"""Report unknown dependencies and wrong variants for dependencies"""
|
||||
def _issues_in_depends_on_directive(pkgs, error_cls):
|
||||
"""Reports issues with 'depends_on' directives.
|
||||
|
||||
Issues might be unknown dependencies, unknown variants or variant values, or declaration
|
||||
of nested dependencies.
|
||||
"""
|
||||
errors = []
|
||||
for pkg_name in pkgs:
|
||||
pkg_cls = spack.repo.PATH.get_pkg_class(pkg_name)
|
||||
filename = spack.repo.PATH.filename_for_package_name(pkg_name)
|
||||
for dependency_name, dependency_data in pkg_cls.dependencies.items():
|
||||
# Check if there are nested dependencies declared. We don't want directives like:
|
||||
#
|
||||
# depends_on('foo+bar ^fee+baz')
|
||||
#
|
||||
# but we'd like to have two dependencies listed instead.
|
||||
for when, dependency_edge in dependency_data.items():
|
||||
dependency_spec = dependency_edge.spec
|
||||
nested_dependencies = dependency_spec.dependencies()
|
||||
if nested_dependencies:
|
||||
summary = (
|
||||
f"{pkg_name}: invalid nested dependency "
|
||||
f"declaration '{str(dependency_spec)}'"
|
||||
)
|
||||
details = [
|
||||
f"split depends_on('{str(dependency_spec)}', when='{str(when)}') "
|
||||
f"into {len(nested_dependencies) + 1} directives",
|
||||
f"in {filename}",
|
||||
]
|
||||
errors.append(error_cls(summary=summary, details=details))
|
||||
|
||||
# No need to analyze virtual packages
|
||||
if spack.repo.PATH.is_virtual(dependency_name):
|
||||
continue
|
||||
@@ -776,7 +884,7 @@ def _version_constraints_are_satisfiable_by_some_version_in_repo(pkgs, error_cls
|
||||
)
|
||||
except Exception:
|
||||
summary = (
|
||||
"{0}: dependency on {1} cannot be satisfied " "by known versions of {1.name}"
|
||||
"{0}: dependency on {1} cannot be satisfied by known versions of {1.name}"
|
||||
).format(pkg_name, s)
|
||||
details = ["happening in " + filename]
|
||||
if dependency_pkg_cls is not None:
|
||||
@@ -818,6 +926,53 @@ def _analyze_variants_in_directive(pkg, constraint, directive, error_cls):
|
||||
return errors
|
||||
|
||||
|
||||
@package_directives
|
||||
def _named_specs_in_when_arguments(pkgs, error_cls):
|
||||
"""Reports named specs in the 'when=' attribute of a directive.
|
||||
|
||||
Note that 'conflicts' is the only directive allowing that.
|
||||
"""
|
||||
errors = []
|
||||
for pkg_name in pkgs:
|
||||
pkg_cls = spack.repo.PATH.get_pkg_class(pkg_name)
|
||||
|
||||
def _extracts_errors(triggers, summary):
|
||||
_errors = []
|
||||
for trigger in list(triggers):
|
||||
when_spec = spack.spec.Spec(trigger)
|
||||
if when_spec.name is not None and when_spec.name != pkg_name:
|
||||
details = [f"using '{trigger}', should be '^{trigger}'"]
|
||||
_errors.append(error_cls(summary=summary, details=details))
|
||||
return _errors
|
||||
|
||||
for dname, triggers in pkg_cls.dependencies.items():
|
||||
summary = f"{pkg_name}: wrong 'when=' condition for the '{dname}' dependency"
|
||||
errors.extend(_extracts_errors(triggers, summary))
|
||||
|
||||
for vname, (variant, triggers) in pkg_cls.variants.items():
|
||||
summary = f"{pkg_name}: wrong 'when=' condition for the '{vname}' variant"
|
||||
errors.extend(_extracts_errors(triggers, summary))
|
||||
|
||||
for provided, triggers in pkg_cls.provided.items():
|
||||
summary = f"{pkg_name}: wrong 'when=' condition for the '{provided}' virtual"
|
||||
errors.extend(_extracts_errors(triggers, summary))
|
||||
|
||||
for _, triggers in pkg_cls.requirements.items():
|
||||
triggers = [when_spec for when_spec, _, _ in triggers]
|
||||
summary = f"{pkg_name}: wrong 'when=' condition in 'requires' directive"
|
||||
errors.extend(_extracts_errors(triggers, summary))
|
||||
|
||||
triggers = list(pkg_cls.patches)
|
||||
summary = f"{pkg_name}: wrong 'when=' condition in 'patch' directives"
|
||||
errors.extend(_extracts_errors(triggers, summary))
|
||||
|
||||
triggers = list(pkg_cls.resources)
|
||||
summary = f"{pkg_name}: wrong 'when=' condition in 'resource' directives"
|
||||
errors.extend(_extracts_errors(triggers, summary))
|
||||
|
||||
return llnl.util.lang.dedupe(errors)
|
||||
|
||||
|
||||
#: Sanity checks on package directives
|
||||
external_detection = AuditClass(
|
||||
group="externals",
|
||||
|
@@ -230,7 +230,11 @@ def _associate_built_specs_with_mirror(self, cache_key, mirror_url):
|
||||
)
|
||||
return
|
||||
|
||||
spec_list = db.query_local(installed=False, in_buildcache=True)
|
||||
spec_list = [
|
||||
s
|
||||
for s in db.query_local(installed=any, in_buildcache=any)
|
||||
if s.external or db.query_local_by_spec_hash(s.dag_hash()).in_buildcache
|
||||
]
|
||||
|
||||
for indexed_spec in spec_list:
|
||||
dag_hash = indexed_spec.dag_hash()
|
||||
|
@@ -16,6 +16,7 @@
|
||||
import llnl.util.filesystem as fs
|
||||
from llnl.util import tty
|
||||
|
||||
import spack.platforms
|
||||
import spack.store
|
||||
import spack.util.environment
|
||||
import spack.util.executable
|
||||
@@ -206,16 +207,19 @@ def _root_spec(spec_str: str) -> str:
|
||||
"""Add a proper compiler and target to a spec used during bootstrapping.
|
||||
|
||||
Args:
|
||||
spec_str (str): spec to be bootstrapped. Must be without compiler and target.
|
||||
spec_str: spec to be bootstrapped. Must be without compiler and target.
|
||||
"""
|
||||
# Add a proper compiler hint to the root spec. We use GCC for
|
||||
# everything but MacOS and Windows.
|
||||
if str(spack.platforms.host()) == "darwin":
|
||||
# Add a compiler requirement to the root spec.
|
||||
platform = str(spack.platforms.host())
|
||||
if platform == "darwin":
|
||||
spec_str += " %apple-clang"
|
||||
elif str(spack.platforms.host()) == "windows":
|
||||
spec_str += " %msvc"
|
||||
else:
|
||||
elif platform == "windows":
|
||||
# TODO (johnwparent): Remove version constraint when clingo patch is up
|
||||
spec_str += " %msvc@:19.37"
|
||||
elif platform == "linux":
|
||||
spec_str += " %gcc"
|
||||
elif platform == "freebsd":
|
||||
spec_str += " %clang"
|
||||
|
||||
target = archspec.cpu.host().family
|
||||
spec_str += f" target={target}"
|
||||
|
@@ -386,7 +386,7 @@ def ensure_module_importable_or_raise(module: str, abstract_spec: Optional[str]
|
||||
exception_handler = GroupedExceptionHandler()
|
||||
|
||||
for current_config in bootstrapping_sources():
|
||||
with exception_handler.forward(current_config["name"]):
|
||||
with exception_handler.forward(current_config["name"], Exception):
|
||||
source_is_enabled_or_raise(current_config)
|
||||
current_bootstrapper = create_bootstrapper(current_config)
|
||||
if current_bootstrapper.try_import(module, abstract_spec):
|
||||
@@ -441,7 +441,7 @@ def ensure_executables_in_path_or_raise(
|
||||
exception_handler = GroupedExceptionHandler()
|
||||
|
||||
for current_config in bootstrapping_sources():
|
||||
with exception_handler.forward(current_config["name"]):
|
||||
with exception_handler.forward(current_config["name"], Exception):
|
||||
source_is_enabled_or_raise(current_config)
|
||||
current_bootstrapper = create_bootstrapper(current_config)
|
||||
if current_bootstrapper.try_search_path(executables, abstract_spec):
|
||||
|
@@ -19,7 +19,6 @@
|
||||
import spack.tengine
|
||||
import spack.util.cpus
|
||||
import spack.util.executable
|
||||
from spack.environment import depfile
|
||||
|
||||
from ._common import _root_spec
|
||||
from .config import root_path, spec_for_current_python, store_path
|
||||
@@ -86,12 +85,9 @@ def __init__(self) -> None:
|
||||
super().__init__(self.environment_root())
|
||||
|
||||
def update_installations(self) -> None:
|
||||
"""Update the installations of this environment.
|
||||
|
||||
The update is done using a depfile on Linux and macOS, and using the ``install_all``
|
||||
method of environments on Windows.
|
||||
"""
|
||||
with tty.SuppressOutput(msg_enabled=False, warn_enabled=False):
|
||||
"""Update the installations of this environment."""
|
||||
log_enabled = tty.is_debug() or tty.is_verbose()
|
||||
with tty.SuppressOutput(msg_enabled=log_enabled, warn_enabled=log_enabled):
|
||||
specs = self.concretize()
|
||||
if specs:
|
||||
colorized_specs = [
|
||||
@@ -100,11 +96,9 @@ def update_installations(self) -> None:
|
||||
]
|
||||
tty.msg(f"[BOOTSTRAPPING] Installing dependencies ({', '.join(colorized_specs)})")
|
||||
self.write(regenerate=False)
|
||||
if sys.platform == "win32":
|
||||
with tty.SuppressOutput(msg_enabled=log_enabled, warn_enabled=log_enabled):
|
||||
self.install_all()
|
||||
else:
|
||||
self._install_with_depfile()
|
||||
self.write(regenerate=True)
|
||||
self.write(regenerate=True)
|
||||
|
||||
def update_syspath_and_environ(self) -> None:
|
||||
"""Update ``sys.path`` and the PATH, PYTHONPATH environment variables to point to
|
||||
@@ -122,25 +116,6 @@ def update_syspath_and_environ(self) -> None:
|
||||
+ [str(x) for x in self.pythonpaths()]
|
||||
)
|
||||
|
||||
def _install_with_depfile(self) -> None:
|
||||
model = depfile.MakefileModel.from_env(self)
|
||||
template = spack.tengine.make_environment().get_template(
|
||||
os.path.join("depfile", "Makefile")
|
||||
)
|
||||
makefile = self.environment_root() / "Makefile"
|
||||
makefile.write_text(template.render(model.to_dict()))
|
||||
make = spack.util.executable.which("make")
|
||||
kwargs = {}
|
||||
if not tty.is_debug():
|
||||
kwargs = {"output": os.devnull, "error": os.devnull}
|
||||
make(
|
||||
"-C",
|
||||
str(self.environment_root()),
|
||||
"-j",
|
||||
str(spack.util.cpus.determine_number_of_jobs(parallel=True)),
|
||||
**kwargs,
|
||||
)
|
||||
|
||||
def _write_spack_yaml_file(self) -> None:
|
||||
tty.msg(
|
||||
"[BOOTSTRAPPING] Spack has missing dependencies, creating a bootstrapping environment"
|
||||
@@ -161,7 +136,7 @@ def _write_spack_yaml_file(self) -> None:
|
||||
|
||||
def isort_root_spec() -> str:
|
||||
"""Return the root spec used to bootstrap isort"""
|
||||
return _root_spec("py-isort@4.3.5:")
|
||||
return _root_spec("py-isort@5")
|
||||
|
||||
|
||||
def mypy_root_spec() -> str:
|
||||
|
@@ -66,7 +66,6 @@ def _core_requirements() -> List[RequiredResponseType]:
|
||||
_core_system_exes = {
|
||||
"make": _missing("make", "required to build software from sources"),
|
||||
"patch": _missing("patch", "required to patch source code before building"),
|
||||
"bash": _missing("bash", "required for Spack compiler wrapper"),
|
||||
"tar": _missing("tar", "required to manage code archives"),
|
||||
"gzip": _missing("gzip", "required to compress/decompress code archives"),
|
||||
"unzip": _missing("unzip", "required to compress/decompress code archives"),
|
||||
|
@@ -324,19 +324,29 @@ def set_compiler_environment_variables(pkg, env):
|
||||
# ttyout, ttyerr, etc.
|
||||
link_dir = spack.paths.build_env_path
|
||||
|
||||
# Set SPACK compiler variables so that our wrapper knows what to call
|
||||
# Set SPACK compiler variables so that our wrapper knows what to
|
||||
# call. If there is no compiler configured then use a default
|
||||
# wrapper which will emit an error if it is used.
|
||||
if compiler.cc:
|
||||
env.set("SPACK_CC", compiler.cc)
|
||||
env.set("CC", os.path.join(link_dir, compiler.link_paths["cc"]))
|
||||
else:
|
||||
env.set("CC", os.path.join(link_dir, "cc"))
|
||||
if compiler.cxx:
|
||||
env.set("SPACK_CXX", compiler.cxx)
|
||||
env.set("CXX", os.path.join(link_dir, compiler.link_paths["cxx"]))
|
||||
else:
|
||||
env.set("CC", os.path.join(link_dir, "c++"))
|
||||
if compiler.f77:
|
||||
env.set("SPACK_F77", compiler.f77)
|
||||
env.set("F77", os.path.join(link_dir, compiler.link_paths["f77"]))
|
||||
else:
|
||||
env.set("F77", os.path.join(link_dir, "f77"))
|
||||
if compiler.fc:
|
||||
env.set("SPACK_FC", compiler.fc)
|
||||
env.set("FC", os.path.join(link_dir, compiler.link_paths["fc"]))
|
||||
else:
|
||||
env.set("FC", os.path.join(link_dir, "fc"))
|
||||
|
||||
# Set SPACK compiler rpath flags so that our wrapper knows what to use
|
||||
env.set("SPACK_CC_RPATH_ARG", compiler.cc_rpath_arg)
|
||||
@@ -743,15 +753,16 @@ def setup_package(pkg, dirty, context: Context = Context.BUILD):
|
||||
set_compiler_environment_variables(pkg, env_mods)
|
||||
set_wrapper_variables(pkg, env_mods)
|
||||
|
||||
tty.debug("setup_package: grabbing modifications from dependencies")
|
||||
env_mods.extend(setup_context.get_env_modifications())
|
||||
tty.debug("setup_package: collected all modifications from dependencies")
|
||||
|
||||
# architecture specific setup
|
||||
# Platform specific setup goes before package specific setup. This is for setting
|
||||
# defaults like MACOSX_DEPLOYMENT_TARGET on macOS.
|
||||
platform = spack.platforms.by_name(pkg.spec.architecture.platform)
|
||||
target = platform.target(pkg.spec.architecture.target)
|
||||
platform.setup_platform_environment(pkg, env_mods)
|
||||
|
||||
tty.debug("setup_package: grabbing modifications from dependencies")
|
||||
env_mods.extend(setup_context.get_env_modifications())
|
||||
tty.debug("setup_package: collected all modifications from dependencies")
|
||||
|
||||
if context == Context.TEST:
|
||||
env_mods.prepend_path("PATH", ".")
|
||||
elif context == Context.BUILD and not dirty and not env_mods.is_unset("CPATH"):
|
||||
|
@@ -9,6 +9,7 @@
|
||||
import llnl.util.filesystem as fs
|
||||
import llnl.util.tty as tty
|
||||
|
||||
import spack.build_environment
|
||||
import spack.builder
|
||||
|
||||
from .cmake import CMakeBuilder, CMakePackage
|
||||
@@ -285,6 +286,19 @@ def initconfig_hardware_entries(self):
|
||||
def std_initconfig_entries(self):
|
||||
cmake_prefix_path_env = os.environ["CMAKE_PREFIX_PATH"]
|
||||
cmake_prefix_path = cmake_prefix_path_env.replace(os.pathsep, ";")
|
||||
cmake_rpaths_env = spack.build_environment.get_rpaths(self.pkg)
|
||||
cmake_rpaths_path = ";".join(cmake_rpaths_env)
|
||||
complete_rpath_list = cmake_rpaths_path
|
||||
if "SPACK_COMPILER_EXTRA_RPATHS" in os.environ:
|
||||
spack_extra_rpaths_env = os.environ["SPACK_COMPILER_EXTRA_RPATHS"]
|
||||
spack_extra_rpaths_path = spack_extra_rpaths_env.replace(os.pathsep, ";")
|
||||
complete_rpath_list = "{0};{1}".format(complete_rpath_list, spack_extra_rpaths_path)
|
||||
|
||||
if "SPACK_COMPILER_IMPLICIT_RPATHS" in os.environ:
|
||||
spack_implicit_rpaths_env = os.environ["SPACK_COMPILER_IMPLICIT_RPATHS"]
|
||||
spack_implicit_rpaths_path = spack_implicit_rpaths_env.replace(os.pathsep, ";")
|
||||
complete_rpath_list = "{0};{1}".format(complete_rpath_list, spack_implicit_rpaths_path)
|
||||
|
||||
return [
|
||||
"#------------------{0}".format("-" * 60),
|
||||
"# !!!! This is a generated file, edit at own risk !!!!",
|
||||
@@ -292,6 +306,9 @@ def std_initconfig_entries(self):
|
||||
"# CMake executable path: {0}".format(self.pkg.spec["cmake"].command.path),
|
||||
"#------------------{0}\n".format("-" * 60),
|
||||
cmake_cache_string("CMAKE_PREFIX_PATH", cmake_prefix_path),
|
||||
cmake_cache_string("CMAKE_INSTALL_RPATH_USE_LINK_PATH", "ON"),
|
||||
cmake_cache_string("CMAKE_BUILD_RPATH", complete_rpath_list),
|
||||
cmake_cache_string("CMAKE_INSTALL_RPATH", complete_rpath_list),
|
||||
self.define_cmake_cache_from_variant("CMAKE_BUILD_TYPE", "build_type"),
|
||||
]
|
||||
|
||||
|
89
lib/spack/spack/build_systems/cargo.py
Normal file
89
lib/spack/spack/build_systems/cargo.py
Normal file
@@ -0,0 +1,89 @@
|
||||
# Copyright 2013-2023 Lawrence Livermore National Security, LLC and other
|
||||
# Spack Project Developers. See the top-level COPYRIGHT file for details.
|
||||
#
|
||||
# SPDX-License-Identifier: (Apache-2.0 OR MIT)
|
||||
|
||||
import inspect
|
||||
|
||||
import llnl.util.filesystem as fs
|
||||
|
||||
import spack.builder
|
||||
import spack.package_base
|
||||
from spack.directives import build_system, depends_on
|
||||
from spack.multimethod import when
|
||||
|
||||
from ._checks import BaseBuilder, execute_install_time_tests
|
||||
|
||||
|
||||
class CargoPackage(spack.package_base.PackageBase):
|
||||
"""Specialized class for packages built using a Makefiles."""
|
||||
|
||||
#: This attribute is used in UI queries that need to know the build
|
||||
#: system base class
|
||||
build_system_class = "CargoPackage"
|
||||
|
||||
build_system("cargo")
|
||||
|
||||
with when("build_system=cargo"):
|
||||
depends_on("rust", type="build")
|
||||
|
||||
|
||||
@spack.builder.builder("cargo")
|
||||
class CargoBuilder(BaseBuilder):
|
||||
"""The Cargo builder encodes the most common way of building software with
|
||||
a rust Cargo.toml file. It has two phases that can be overridden, if need be:
|
||||
|
||||
1. :py:meth:`~.CargoBuilder.build`
|
||||
2. :py:meth:`~.CargoBuilder.install`
|
||||
|
||||
For a finer tuning you may override:
|
||||
|
||||
+-----------------------------------------------+----------------------+
|
||||
| **Method** | **Purpose** |
|
||||
+===============================================+======================+
|
||||
| :py:meth:`~.CargoBuilder.build_args` | Specify arguments |
|
||||
| | to ``cargo install`` |
|
||||
+-----------------------------------------------+----------------------+
|
||||
| :py:meth:`~.CargoBuilder.check_args` | Specify arguments |
|
||||
| | to ``cargo test`` |
|
||||
+-----------------------------------------------+----------------------+
|
||||
"""
|
||||
|
||||
phases = ("build", "install")
|
||||
|
||||
#: Callback names for install-time test
|
||||
install_time_test_callbacks = ["check"]
|
||||
|
||||
@property
|
||||
def build_directory(self):
|
||||
"""Return the directory containing the main Cargo.toml."""
|
||||
return self.pkg.stage.source_path
|
||||
|
||||
@property
|
||||
def build_args(self):
|
||||
"""Arguments for ``cargo build``."""
|
||||
return []
|
||||
|
||||
@property
|
||||
def check_args(self):
|
||||
"""Argument for ``cargo test`` during check phase"""
|
||||
return []
|
||||
|
||||
def build(self, pkg, spec, prefix):
|
||||
"""Runs ``cargo install`` in the source directory"""
|
||||
with fs.working_dir(self.build_directory):
|
||||
inspect.getmodule(pkg).cargo(
|
||||
"install", "--root", "out", "--path", ".", *self.build_args
|
||||
)
|
||||
|
||||
def install(self, pkg, spec, prefix):
|
||||
"""Copy build files into package prefix."""
|
||||
with fs.working_dir(self.build_directory):
|
||||
fs.install_tree("out", prefix)
|
||||
|
||||
spack.builder.run_after("install")(execute_install_time_tests)
|
||||
|
||||
def check(self):
|
||||
"""Run "cargo test"."""
|
||||
with fs.working_dir(self.build_directory):
|
||||
inspect.getmodule(self.pkg).cargo("test", *self.check_args)
|
@@ -136,12 +136,12 @@ def cuda_flags(arch_list):
|
||||
conflicts("%gcc@11:", when="+cuda ^cuda@:11.4.0")
|
||||
conflicts("%gcc@11.2:", when="+cuda ^cuda@:11.5")
|
||||
conflicts("%gcc@12:", when="+cuda ^cuda@:11.8")
|
||||
conflicts("%gcc@13:", when="+cuda ^cuda@:12.1")
|
||||
conflicts("%gcc@13:", when="+cuda ^cuda@:12.3")
|
||||
conflicts("%clang@12:", when="+cuda ^cuda@:11.4.0")
|
||||
conflicts("%clang@13:", when="+cuda ^cuda@:11.5")
|
||||
conflicts("%clang@14:", when="+cuda ^cuda@:11.7")
|
||||
conflicts("%clang@15:", when="+cuda ^cuda@:12.0")
|
||||
conflicts("%clang@16:", when="+cuda ^cuda@:12.1")
|
||||
conflicts("%clang@16:", when="+cuda ^cuda@:12.3")
|
||||
|
||||
# https://gist.github.com/ax3l/9489132#gistcomment-3860114
|
||||
conflicts("%gcc@10", when="+cuda ^cuda@:11.4.0")
|
||||
|
98
lib/spack/spack/build_systems/go.py
Normal file
98
lib/spack/spack/build_systems/go.py
Normal file
@@ -0,0 +1,98 @@
|
||||
# Copyright 2013-2023 Lawrence Livermore National Security, LLC and other
|
||||
# Spack Project Developers. See the top-level COPYRIGHT file for details.
|
||||
#
|
||||
# SPDX-License-Identifier: (Apache-2.0 OR MIT)
|
||||
|
||||
import inspect
|
||||
|
||||
import llnl.util.filesystem as fs
|
||||
|
||||
import spack.builder
|
||||
import spack.package_base
|
||||
from spack.directives import build_system, extends
|
||||
from spack.multimethod import when
|
||||
|
||||
from ._checks import BaseBuilder, execute_install_time_tests
|
||||
|
||||
|
||||
class GoPackage(spack.package_base.PackageBase):
|
||||
"""Specialized class for packages built using the Go toolchain."""
|
||||
|
||||
#: This attribute is used in UI queries that need to know the build
|
||||
#: system base class
|
||||
build_system_class = "GoPackage"
|
||||
|
||||
#: Legacy buildsystem attribute used to deserialize and install old specs
|
||||
legacy_buildsystem = "go"
|
||||
|
||||
build_system("go")
|
||||
|
||||
with when("build_system=go"):
|
||||
# TODO: this seems like it should be depends_on, see
|
||||
# setup_dependent_build_environment in go for why I kept it like this
|
||||
extends("go@1.14:", type="build")
|
||||
|
||||
|
||||
@spack.builder.builder("go")
|
||||
class GoBuilder(BaseBuilder):
|
||||
"""The Go builder encodes the most common way of building software with
|
||||
a golang go.mod file. It has two phases that can be overridden, if need be:
|
||||
|
||||
1. :py:meth:`~.GoBuilder.build`
|
||||
2. :py:meth:`~.GoBuilder.install`
|
||||
|
||||
For a finer tuning you may override:
|
||||
|
||||
+-----------------------------------------------+--------------------+
|
||||
| **Method** | **Purpose** |
|
||||
+===============================================+====================+
|
||||
| :py:meth:`~.GoBuilder.build_args` | Specify arguments |
|
||||
| | to ``go build`` |
|
||||
+-----------------------------------------------+--------------------+
|
||||
| :py:meth:`~.GoBuilder.check_args` | Specify arguments |
|
||||
| | to ``go test`` |
|
||||
+-----------------------------------------------+--------------------+
|
||||
"""
|
||||
|
||||
phases = ("build", "install")
|
||||
|
||||
#: Callback names for install-time test
|
||||
install_time_test_callbacks = ["check"]
|
||||
|
||||
def setup_build_environment(self, env):
|
||||
env.set("GO111MODULE", "on")
|
||||
env.set("GOTOOLCHAIN", "local")
|
||||
|
||||
@property
|
||||
def build_directory(self):
|
||||
"""Return the directory containing the main go.mod."""
|
||||
return self.pkg.stage.source_path
|
||||
|
||||
@property
|
||||
def build_args(self):
|
||||
"""Arguments for ``go build``."""
|
||||
# Pass ldflags -s = --strip-all and -w = --no-warnings by default
|
||||
return ["-ldflags", "-s -w", "-o", f"{self.pkg.name}"]
|
||||
|
||||
@property
|
||||
def check_args(self):
|
||||
"""Argument for ``go test`` during check phase"""
|
||||
return []
|
||||
|
||||
def build(self, pkg, spec, prefix):
|
||||
"""Runs ``go build`` in the source directory"""
|
||||
with fs.working_dir(self.build_directory):
|
||||
inspect.getmodule(pkg).go("build", *self.build_args)
|
||||
|
||||
def install(self, pkg, spec, prefix):
|
||||
"""Install built binaries into prefix bin."""
|
||||
with fs.working_dir(self.build_directory):
|
||||
fs.mkdirp(prefix.bin)
|
||||
fs.install(pkg.name, prefix.bin)
|
||||
|
||||
spack.builder.run_after("install")(execute_install_time_tests)
|
||||
|
||||
def check(self):
|
||||
"""Run ``go test .`` in the source directory"""
|
||||
with fs.working_dir(self.build_directory):
|
||||
inspect.getmodule(self.pkg).go("test", *self.check_args)
|
@@ -7,9 +7,9 @@
|
||||
import os
|
||||
import platform
|
||||
import shutil
|
||||
from os.path import basename, dirname, isdir
|
||||
from os.path import basename, isdir
|
||||
|
||||
from llnl.util.filesystem import find_headers, find_libraries, join_path, mkdirp
|
||||
from llnl.util.filesystem import HeaderList, find_libraries, join_path, mkdirp
|
||||
from llnl.util.link_tree import LinkTree
|
||||
|
||||
from spack.directives import conflicts, variant
|
||||
@@ -55,10 +55,21 @@ def component_dir(self):
|
||||
"""Subdirectory for this component in the install prefix."""
|
||||
raise NotImplementedError
|
||||
|
||||
@property
|
||||
def v2_layout_versions(self):
|
||||
"""Version that implements the v2 directory layout."""
|
||||
raise NotImplementedError
|
||||
|
||||
@property
|
||||
def v2_layout(self):
|
||||
"""Returns true if this version implements the v2 directory layout."""
|
||||
return self.spec.satisfies(self.v2_layout_versions)
|
||||
|
||||
@property
|
||||
def component_prefix(self):
|
||||
"""Path to component <prefix>/<component>/<version>."""
|
||||
return self.prefix.join(join_path(self.component_dir, self.spec.version))
|
||||
v = self.spec.version.up_to(2) if self.v2_layout else self.spec.version
|
||||
return self.prefix.join(self.component_dir).join(str(v))
|
||||
|
||||
@property
|
||||
def env_script_args(self):
|
||||
@@ -112,8 +123,9 @@ def install_component(self, installer_path):
|
||||
shutil.rmtree("/var/intel/installercache", ignore_errors=True)
|
||||
|
||||
# Some installers have a bug and do not return an error code when failing
|
||||
if not isdir(join_path(self.prefix, self.component_dir)):
|
||||
raise RuntimeError("install failed")
|
||||
install_dir = self.component_prefix
|
||||
if not isdir(install_dir):
|
||||
raise RuntimeError("install failed to directory: {0}".format(install_dir))
|
||||
|
||||
def setup_run_environment(self, env):
|
||||
"""Adds environment variables to the generated module file.
|
||||
@@ -128,7 +140,7 @@ def setup_run_environment(self, env):
|
||||
if "~envmods" not in self.spec:
|
||||
env.extend(
|
||||
EnvironmentModifications.from_sourcing_file(
|
||||
join_path(self.component_prefix, "env", "vars.sh"), *self.env_script_args
|
||||
self.component_prefix.env.join("vars.sh"), *self.env_script_args
|
||||
)
|
||||
)
|
||||
|
||||
@@ -167,16 +179,40 @@ class IntelOneApiLibraryPackage(IntelOneApiPackage):
|
||||
|
||||
"""
|
||||
|
||||
def header_directories(self, dirs):
|
||||
h = HeaderList([])
|
||||
h.directories = dirs
|
||||
return h
|
||||
|
||||
@property
|
||||
def headers(self):
|
||||
include_path = join_path(self.component_prefix, "include")
|
||||
return find_headers("*", include_path, recursive=True)
|
||||
return self.header_directories(
|
||||
[self.component_prefix.include, self.component_prefix.include.join(self.component_dir)]
|
||||
)
|
||||
|
||||
@property
|
||||
def libs(self):
|
||||
lib_path = join_path(self.component_prefix, "lib", "intel64")
|
||||
lib_path = lib_path if isdir(lib_path) else dirname(lib_path)
|
||||
return find_libraries("*", root=lib_path, shared=True, recursive=True)
|
||||
# for v2_layout all libraries are in the top level, v1 sometimes put them in intel64
|
||||
return find_libraries("*", root=self.component_prefix.lib, recursive=not self.v2_layout)
|
||||
|
||||
|
||||
class IntelOneApiLibraryPackageWithSdk(IntelOneApiPackage):
|
||||
"""Base class for Intel oneAPI library packages with SDK components.
|
||||
|
||||
Contains some convenient default implementations for libraries
|
||||
that expose functionality in sdk subdirectories.
|
||||
Implement the method directly in the package if something
|
||||
different is needed.
|
||||
|
||||
"""
|
||||
|
||||
@property
|
||||
def headers(self):
|
||||
return self.header_directories([self.component_prefix.sdk.include])
|
||||
|
||||
@property
|
||||
def libs(self):
|
||||
return find_libraries("*", self.component_prefix.sdk.lib64)
|
||||
|
||||
|
||||
class IntelOneApiStaticLibraryList:
|
||||
|
@@ -6,13 +6,14 @@
|
||||
import os
|
||||
import re
|
||||
import shutil
|
||||
from typing import Optional
|
||||
from typing import Iterable, List, Mapping, Optional
|
||||
|
||||
import archspec
|
||||
|
||||
import llnl.util.filesystem as fs
|
||||
import llnl.util.lang as lang
|
||||
import llnl.util.tty as tty
|
||||
from llnl.util.filesystem import HeaderList, LibraryList
|
||||
|
||||
import spack.builder
|
||||
import spack.config
|
||||
@@ -25,14 +26,18 @@
|
||||
from spack.directives import build_system, depends_on, extends, maintainers
|
||||
from spack.error import NoHeadersError, NoLibrariesError
|
||||
from spack.install_test import test_part
|
||||
from spack.spec import Spec
|
||||
from spack.util.prefix import Prefix
|
||||
|
||||
from ._checks import BaseBuilder, execute_install_time_tests
|
||||
|
||||
|
||||
def _flatten_dict(dictionary):
|
||||
def _flatten_dict(dictionary: Mapping[str, object]) -> Iterable[str]:
|
||||
"""Iterable that yields KEY=VALUE paths through a dictionary.
|
||||
|
||||
Args:
|
||||
dictionary: Possibly nested dictionary of arbitrary keys and values.
|
||||
|
||||
Yields:
|
||||
A single path through the dictionary.
|
||||
"""
|
||||
@@ -50,7 +55,7 @@ class PythonExtension(spack.package_base.PackageBase):
|
||||
maintainers("adamjstewart")
|
||||
|
||||
@property
|
||||
def import_modules(self):
|
||||
def import_modules(self) -> Iterable[str]:
|
||||
"""Names of modules that the Python package provides.
|
||||
|
||||
These are used to test whether or not the installation succeeded.
|
||||
@@ -65,7 +70,7 @@ def import_modules(self):
|
||||
detected, this property can be overridden by the package.
|
||||
|
||||
Returns:
|
||||
list: list of strings of module names
|
||||
List of strings of module names.
|
||||
"""
|
||||
modules = []
|
||||
pkg = self.spec["python"].package
|
||||
@@ -102,14 +107,14 @@ def import_modules(self):
|
||||
return modules
|
||||
|
||||
@property
|
||||
def skip_modules(self):
|
||||
def skip_modules(self) -> Iterable[str]:
|
||||
"""Names of modules that should be skipped when running tests.
|
||||
|
||||
These are a subset of import_modules. If a module has submodules,
|
||||
they are skipped as well (meaning a.b is skipped if a is contained).
|
||||
|
||||
Returns:
|
||||
list: list of strings of module names
|
||||
List of strings of module names.
|
||||
"""
|
||||
return []
|
||||
|
||||
@@ -185,12 +190,12 @@ def remove_files_from_view(self, view, merge_map):
|
||||
|
||||
view.remove_files(to_remove)
|
||||
|
||||
def test_imports(self):
|
||||
def test_imports(self) -> None:
|
||||
"""Attempts to import modules of the installed package."""
|
||||
|
||||
# Make sure we are importing the installed modules,
|
||||
# not the ones in the source directory
|
||||
python = inspect.getmodule(self).python
|
||||
python = inspect.getmodule(self).python # type: ignore[union-attr]
|
||||
for module in self.import_modules:
|
||||
with test_part(
|
||||
self,
|
||||
@@ -315,24 +320,27 @@ class PythonPackage(PythonExtension):
|
||||
py_namespace: Optional[str] = None
|
||||
|
||||
@lang.classproperty
|
||||
def homepage(cls):
|
||||
def homepage(cls) -> Optional[str]: # type: ignore[override]
|
||||
if cls.pypi:
|
||||
name = cls.pypi.split("/")[0]
|
||||
return "https://pypi.org/project/" + name + "/"
|
||||
return f"https://pypi.org/project/{name}/"
|
||||
return None
|
||||
|
||||
@lang.classproperty
|
||||
def url(cls):
|
||||
def url(cls) -> Optional[str]:
|
||||
if cls.pypi:
|
||||
return "https://files.pythonhosted.org/packages/source/" + cls.pypi[0] + "/" + cls.pypi
|
||||
return f"https://files.pythonhosted.org/packages/source/{cls.pypi[0]}/{cls.pypi}"
|
||||
return None
|
||||
|
||||
@lang.classproperty
|
||||
def list_url(cls):
|
||||
def list_url(cls) -> Optional[str]: # type: ignore[override]
|
||||
if cls.pypi:
|
||||
name = cls.pypi.split("/")[0]
|
||||
return "https://pypi.org/simple/" + name + "/"
|
||||
return f"https://pypi.org/simple/{name}/"
|
||||
return None
|
||||
|
||||
@property
|
||||
def headers(self):
|
||||
def headers(self) -> HeaderList:
|
||||
"""Discover header files in platlib."""
|
||||
|
||||
# Remove py- prefix in package name
|
||||
@@ -350,7 +358,7 @@ def headers(self):
|
||||
raise NoHeadersError(msg.format(self.spec.name, include, platlib))
|
||||
|
||||
@property
|
||||
def libs(self):
|
||||
def libs(self) -> LibraryList:
|
||||
"""Discover libraries in platlib."""
|
||||
|
||||
# Remove py- prefix in package name
|
||||
@@ -384,7 +392,7 @@ class PythonPipBuilder(BaseBuilder):
|
||||
install_time_test_callbacks = ["test"]
|
||||
|
||||
@staticmethod
|
||||
def std_args(cls):
|
||||
def std_args(cls) -> List[str]:
|
||||
return [
|
||||
# Verbose
|
||||
"-vvv",
|
||||
@@ -409,7 +417,7 @@ def std_args(cls):
|
||||
]
|
||||
|
||||
@property
|
||||
def build_directory(self):
|
||||
def build_directory(self) -> str:
|
||||
"""The root directory of the Python package.
|
||||
|
||||
This is usually the directory containing one of the following files:
|
||||
@@ -420,51 +428,51 @@ def build_directory(self):
|
||||
"""
|
||||
return self.pkg.stage.source_path
|
||||
|
||||
def config_settings(self, spec, prefix):
|
||||
def config_settings(self, spec: Spec, prefix: Prefix) -> Mapping[str, object]:
|
||||
"""Configuration settings to be passed to the PEP 517 build backend.
|
||||
|
||||
Requires pip 22.1 or newer for keys that appear only a single time,
|
||||
or pip 23.1 or newer if the same key appears multiple times.
|
||||
|
||||
Args:
|
||||
spec (spack.spec.Spec): build spec
|
||||
prefix (spack.util.prefix.Prefix): installation prefix
|
||||
spec: Build spec.
|
||||
prefix: Installation prefix.
|
||||
|
||||
Returns:
|
||||
dict: Possibly nested dictionary of KEY, VALUE settings
|
||||
Possibly nested dictionary of KEY, VALUE settings.
|
||||
"""
|
||||
return {}
|
||||
|
||||
def install_options(self, spec, prefix):
|
||||
def install_options(self, spec: Spec, prefix: Prefix) -> Iterable[str]:
|
||||
"""Extra arguments to be supplied to the setup.py install command.
|
||||
|
||||
Requires pip 23.0 or older.
|
||||
|
||||
Args:
|
||||
spec (spack.spec.Spec): build spec
|
||||
prefix (spack.util.prefix.Prefix): installation prefix
|
||||
spec: Build spec.
|
||||
prefix: Installation prefix.
|
||||
|
||||
Returns:
|
||||
list: list of options
|
||||
List of options.
|
||||
"""
|
||||
return []
|
||||
|
||||
def global_options(self, spec, prefix):
|
||||
def global_options(self, spec: Spec, prefix: Prefix) -> Iterable[str]:
|
||||
"""Extra global options to be supplied to the setup.py call before the install
|
||||
or bdist_wheel command.
|
||||
|
||||
Deprecated in pip 23.1.
|
||||
|
||||
Args:
|
||||
spec (spack.spec.Spec): build spec
|
||||
prefix (spack.util.prefix.Prefix): installation prefix
|
||||
spec: Build spec.
|
||||
prefix: Installation prefix.
|
||||
|
||||
Returns:
|
||||
list: list of options
|
||||
List of options.
|
||||
"""
|
||||
return []
|
||||
|
||||
def install(self, pkg, spec, prefix):
|
||||
def install(self, pkg: PythonPackage, spec: Spec, prefix: Prefix) -> None:
|
||||
"""Install everything from build directory."""
|
||||
|
||||
args = PythonPipBuilder.std_args(pkg) + [f"--prefix={prefix}"]
|
||||
|
@@ -6,7 +6,7 @@
|
||||
import llnl.util.tty as tty
|
||||
|
||||
import spack.cmd
|
||||
import spack.cmd.common.arguments as arguments
|
||||
from spack.cmd.common import arguments
|
||||
|
||||
description = "add a spec to an environment"
|
||||
section = "environments"
|
||||
|
@@ -2,6 +2,8 @@
|
||||
# Spack Project Developers. See the top-level COPYRIGHT file for details.
|
||||
#
|
||||
# SPDX-License-Identifier: (Apache-2.0 OR MIT)
|
||||
import warnings
|
||||
|
||||
import llnl.util.tty as tty
|
||||
import llnl.util.tty.colify
|
||||
import llnl.util.tty.color as cl
|
||||
@@ -52,8 +54,10 @@ def setup_parser(subparser):
|
||||
|
||||
|
||||
def configs(parser, args):
|
||||
reports = spack.audit.run_group(args.subcommand)
|
||||
_process_reports(reports)
|
||||
with warnings.catch_warnings():
|
||||
warnings.simplefilter("ignore")
|
||||
reports = spack.audit.run_group(args.subcommand)
|
||||
_process_reports(reports)
|
||||
|
||||
|
||||
def packages(parser, args):
|
||||
|
@@ -15,13 +15,13 @@
|
||||
import spack.bootstrap
|
||||
import spack.bootstrap.config
|
||||
import spack.bootstrap.core
|
||||
import spack.cmd.common.arguments
|
||||
import spack.config
|
||||
import spack.main
|
||||
import spack.mirror
|
||||
import spack.spec
|
||||
import spack.stage
|
||||
import spack.util.path
|
||||
from spack.cmd.common import arguments
|
||||
|
||||
description = "manage bootstrap configuration"
|
||||
section = "system"
|
||||
@@ -68,12 +68,8 @@
|
||||
|
||||
|
||||
def _add_scope_option(parser):
|
||||
scopes = spack.config.scopes()
|
||||
parser.add_argument(
|
||||
"--scope",
|
||||
choices=scopes,
|
||||
metavar=spack.config.SCOPES_METAVAR,
|
||||
help="configuration scope to read/modify",
|
||||
"--scope", action=arguments.ConfigScope, help="configuration scope to read/modify"
|
||||
)
|
||||
|
||||
|
||||
@@ -106,7 +102,7 @@ def setup_parser(subparser):
|
||||
disable.add_argument("name", help="name of the source to be disabled", nargs="?", default=None)
|
||||
|
||||
reset = sp.add_parser("reset", help="reset bootstrapping configuration to Spack defaults")
|
||||
spack.cmd.common.arguments.add_common_arguments(reset, ["yes_to_all"])
|
||||
arguments.add_common_arguments(reset, ["yes_to_all"])
|
||||
|
||||
root = sp.add_parser("root", help="get/set the root bootstrap directory")
|
||||
_add_scope_option(root)
|
||||
|
@@ -21,7 +21,6 @@
|
||||
|
||||
import spack.binary_distribution as bindist
|
||||
import spack.cmd
|
||||
import spack.cmd.common.arguments as arguments
|
||||
import spack.config
|
||||
import spack.environment as ev
|
||||
import spack.error
|
||||
@@ -40,6 +39,7 @@
|
||||
import spack.util.web as web_util
|
||||
from spack.build_environment import determine_number_of_jobs
|
||||
from spack.cmd import display_specs
|
||||
from spack.cmd.common import arguments
|
||||
from spack.oci.image import (
|
||||
Digest,
|
||||
ImageReference,
|
||||
@@ -182,23 +182,22 @@ def setup_parser(subparser: argparse.ArgumentParser):
|
||||
)
|
||||
|
||||
# used to construct scope arguments below
|
||||
scopes = spack.config.scopes()
|
||||
|
||||
check.add_argument(
|
||||
"--scope",
|
||||
choices=scopes,
|
||||
metavar=spack.config.SCOPES_METAVAR,
|
||||
default=spack.config.default_modify_scope(),
|
||||
action=arguments.ConfigScope,
|
||||
default=lambda: spack.config.default_modify_scope(),
|
||||
help="configuration scope containing mirrors to check",
|
||||
)
|
||||
check_spec_or_specfile = check.add_mutually_exclusive_group(required=True)
|
||||
check_spec_or_specfile.add_argument(
|
||||
# Unfortunately there are 3 ways to do the same thing here:
|
||||
check_specs = check.add_mutually_exclusive_group()
|
||||
check_specs.add_argument(
|
||||
"-s", "--spec", help="check single spec instead of release specs file"
|
||||
)
|
||||
check_spec_or_specfile.add_argument(
|
||||
check_specs.add_argument(
|
||||
"--spec-file",
|
||||
help="check single spec from json or yaml file instead of release specs file",
|
||||
)
|
||||
arguments.add_common_arguments(check, ["specs"])
|
||||
|
||||
check.set_defaults(func=check_fn)
|
||||
|
||||
@@ -816,15 +815,24 @@ def check_fn(args: argparse.Namespace):
|
||||
exit code is non-zero, then at least one of the indicated specs needs to be rebuilt
|
||||
"""
|
||||
if args.spec_file:
|
||||
specs_arg = (
|
||||
args.spec_file if os.path.sep in args.spec_file else os.path.join(".", args.spec_file)
|
||||
)
|
||||
tty.warn(
|
||||
"The flag `--spec-file` is deprecated and will be removed in Spack 0.22. "
|
||||
"Use --spec instead."
|
||||
f"Use `spack buildcache check {specs_arg}` instead."
|
||||
)
|
||||
elif args.spec:
|
||||
specs_arg = args.spec
|
||||
tty.warn(
|
||||
"The flag `--spec` is deprecated and will be removed in Spack 0.23. "
|
||||
f"Use `spack buildcache check {specs_arg}` instead."
|
||||
)
|
||||
else:
|
||||
specs_arg = args.specs
|
||||
|
||||
specs = spack.cmd.parse_specs(args.spec or args.spec_file)
|
||||
|
||||
if specs:
|
||||
specs = _matching_specs(specs)
|
||||
if specs_arg:
|
||||
specs = _matching_specs(spack.cmd.parse_specs(specs_arg))
|
||||
else:
|
||||
specs = spack.cmd.require_active_env("buildcache check").all_specs()
|
||||
|
||||
|
@@ -4,7 +4,7 @@
|
||||
# SPDX-License-Identifier: (Apache-2.0 OR MIT)
|
||||
|
||||
import spack.cmd
|
||||
import spack.cmd.common.arguments as arguments
|
||||
from spack.cmd.common import arguments
|
||||
|
||||
description = "change an existing spec in an environment"
|
||||
section = "environments"
|
||||
|
@@ -16,6 +16,7 @@
|
||||
import spack.cmd.buildcache as buildcache
|
||||
import spack.config as cfg
|
||||
import spack.environment as ev
|
||||
import spack.environment.depfile
|
||||
import spack.hash_types as ht
|
||||
import spack.mirror
|
||||
import spack.util.gpg as gpg_util
|
||||
@@ -606,7 +607,9 @@ def ci_rebuild(args):
|
||||
"SPACK_INSTALL_FLAGS={}".format(args_to_string(deps_install_args)),
|
||||
"-j$(nproc)",
|
||||
"install-deps/{}".format(
|
||||
ev.depfile.MakefileSpec(job_spec).safe_format("{name}-{version}-{hash}")
|
||||
spack.environment.depfile.MakefileSpec(job_spec).safe_format(
|
||||
"{name}-{version}-{hash}"
|
||||
)
|
||||
),
|
||||
],
|
||||
spack_cmd + ["install"] + root_install_args,
|
||||
|
@@ -12,13 +12,13 @@
|
||||
|
||||
import spack.bootstrap
|
||||
import spack.caches
|
||||
import spack.cmd.common.arguments as arguments
|
||||
import spack.cmd.test
|
||||
import spack.config
|
||||
import spack.repo
|
||||
import spack.stage
|
||||
import spack.store
|
||||
import spack.util.path
|
||||
from spack.cmd.common import arguments
|
||||
from spack.paths import lib_path, var_path
|
||||
|
||||
description = "remove temporary build files and/or downloaded archives"
|
||||
|
@@ -124,6 +124,33 @@ def __call__(self, parser, namespace, values, option_string=None):
|
||||
setattr(namespace, self.dest, deptype)
|
||||
|
||||
|
||||
class ConfigScope(argparse.Action):
|
||||
"""Pick the currently configured config scopes."""
|
||||
|
||||
def __init__(self, *args, **kwargs) -> None:
|
||||
kwargs.setdefault("metavar", spack.config.SCOPES_METAVAR)
|
||||
super().__init__(*args, **kwargs)
|
||||
|
||||
@property
|
||||
def default(self):
|
||||
return self._default() if callable(self._default) else self._default
|
||||
|
||||
@default.setter
|
||||
def default(self, value):
|
||||
self._default = value
|
||||
|
||||
@property
|
||||
def choices(self):
|
||||
return spack.config.scopes().keys()
|
||||
|
||||
@choices.setter
|
||||
def choices(self, value):
|
||||
pass
|
||||
|
||||
def __call__(self, parser, namespace, values, option_string=None):
|
||||
setattr(namespace, self.dest, values)
|
||||
|
||||
|
||||
def _cdash_reporter(namespace):
|
||||
"""Helper function to create a CDash reporter. This function gets an early reference to the
|
||||
argparse namespace under construction, so it can later use it to create the object.
|
||||
|
@@ -8,13 +8,13 @@
|
||||
import llnl.util.tty as tty
|
||||
|
||||
import spack.cmd
|
||||
import spack.cmd.common.arguments as arguments
|
||||
import spack.deptypes as dt
|
||||
import spack.error
|
||||
import spack.paths
|
||||
import spack.spec
|
||||
import spack.store
|
||||
from spack import build_environment, traverse
|
||||
from spack.cmd.common import arguments
|
||||
from spack.context import Context
|
||||
from spack.util.environment import dump_environment, pickle_environment
|
||||
|
||||
|
@@ -14,6 +14,7 @@
|
||||
import spack.compilers
|
||||
import spack.config
|
||||
import spack.spec
|
||||
from spack.cmd.common import arguments
|
||||
|
||||
description = "manage compilers"
|
||||
section = "system"
|
||||
@@ -23,8 +24,6 @@
|
||||
def setup_parser(subparser):
|
||||
sp = subparser.add_subparsers(metavar="SUBCOMMAND", dest="compiler_command")
|
||||
|
||||
scopes = spack.config.scopes()
|
||||
|
||||
# Find
|
||||
find_parser = sp.add_parser(
|
||||
"find",
|
||||
@@ -47,9 +46,8 @@ def setup_parser(subparser):
|
||||
find_parser.add_argument("add_paths", nargs=argparse.REMAINDER)
|
||||
find_parser.add_argument(
|
||||
"--scope",
|
||||
choices=scopes,
|
||||
metavar=spack.config.SCOPES_METAVAR,
|
||||
default=spack.config.default_modify_scope("compilers"),
|
||||
action=arguments.ConfigScope,
|
||||
default=lambda: spack.config.default_modify_scope("compilers"),
|
||||
help="configuration scope to modify",
|
||||
)
|
||||
|
||||
@@ -60,20 +58,15 @@ def setup_parser(subparser):
|
||||
)
|
||||
remove_parser.add_argument("compiler_spec")
|
||||
remove_parser.add_argument(
|
||||
"--scope",
|
||||
choices=scopes,
|
||||
metavar=spack.config.SCOPES_METAVAR,
|
||||
default=None,
|
||||
help="configuration scope to modify",
|
||||
"--scope", action=arguments.ConfigScope, default=None, help="configuration scope to modify"
|
||||
)
|
||||
|
||||
# List
|
||||
list_parser = sp.add_parser("list", help="list available compilers")
|
||||
list_parser.add_argument(
|
||||
"--scope",
|
||||
choices=scopes,
|
||||
metavar=spack.config.SCOPES_METAVAR,
|
||||
default=spack.config.default_list_scope(),
|
||||
action=arguments.ConfigScope,
|
||||
default=lambda: spack.config.default_list_scope(),
|
||||
help="configuration scope to read from",
|
||||
)
|
||||
|
||||
@@ -82,9 +75,8 @@ def setup_parser(subparser):
|
||||
info_parser.add_argument("compiler_spec")
|
||||
info_parser.add_argument(
|
||||
"--scope",
|
||||
choices=scopes,
|
||||
metavar=spack.config.SCOPES_METAVAR,
|
||||
default=spack.config.default_list_scope(),
|
||||
action=arguments.ConfigScope,
|
||||
default=lambda: spack.config.default_list_scope(),
|
||||
help="configuration scope to read from",
|
||||
)
|
||||
|
||||
|
@@ -3,7 +3,7 @@
|
||||
#
|
||||
# SPDX-License-Identifier: (Apache-2.0 OR MIT)
|
||||
|
||||
import spack.config
|
||||
from spack.cmd.common import arguments
|
||||
from spack.cmd.compiler import compiler_list
|
||||
|
||||
description = "list available compilers"
|
||||
@@ -12,13 +12,8 @@
|
||||
|
||||
|
||||
def setup_parser(subparser):
|
||||
scopes = spack.config.scopes()
|
||||
|
||||
subparser.add_argument(
|
||||
"--scope",
|
||||
choices=scopes,
|
||||
metavar=spack.config.SCOPES_METAVAR,
|
||||
help="configuration scope to read/modify",
|
||||
"--scope", action=arguments.ConfigScope, help="configuration scope to read/modify"
|
||||
)
|
||||
|
||||
|
||||
|
@@ -10,7 +10,6 @@
|
||||
import llnl.util.filesystem as fs
|
||||
import llnl.util.tty as tty
|
||||
|
||||
import spack.cmd.common.arguments
|
||||
import spack.config
|
||||
import spack.environment as ev
|
||||
import spack.repo
|
||||
@@ -18,6 +17,7 @@
|
||||
import spack.schema.packages
|
||||
import spack.store
|
||||
import spack.util.spack_yaml as syaml
|
||||
from spack.cmd.common import arguments
|
||||
from spack.util.editor import editor
|
||||
|
||||
description = "get and set configuration options"
|
||||
@@ -26,14 +26,9 @@
|
||||
|
||||
|
||||
def setup_parser(subparser):
|
||||
scopes = spack.config.scopes()
|
||||
|
||||
# User can only choose one
|
||||
subparser.add_argument(
|
||||
"--scope",
|
||||
choices=scopes,
|
||||
metavar=spack.config.SCOPES_METAVAR,
|
||||
help="configuration scope to read/modify",
|
||||
"--scope", action=arguments.ConfigScope, help="configuration scope to read/modify"
|
||||
)
|
||||
|
||||
sp = subparser.add_subparsers(metavar="SUBCOMMAND", dest="config_command")
|
||||
@@ -101,13 +96,13 @@ def setup_parser(subparser):
|
||||
setup_parser.add_parser = add_parser
|
||||
|
||||
update = sp.add_parser("update", help="update configuration files to the latest format")
|
||||
spack.cmd.common.arguments.add_common_arguments(update, ["yes_to_all"])
|
||||
arguments.add_common_arguments(update, ["yes_to_all"])
|
||||
update.add_argument("section", help="section to update")
|
||||
|
||||
revert = sp.add_parser(
|
||||
"revert", help="revert configuration files to their state before update"
|
||||
)
|
||||
spack.cmd.common.arguments.add_common_arguments(revert, ["yes_to_all"])
|
||||
arguments.add_common_arguments(revert, ["yes_to_all"])
|
||||
revert.add_argument("section", help="section to update")
|
||||
|
||||
|
||||
|
@@ -172,6 +172,14 @@ def configure_args(self):
|
||||
return args"""
|
||||
|
||||
|
||||
class CargoPackageTemplate(PackageTemplate):
|
||||
"""Provides appropriate overrides for cargo-based packages"""
|
||||
|
||||
base_class_name = "CargoPackage"
|
||||
|
||||
body_def = ""
|
||||
|
||||
|
||||
class CMakePackageTemplate(PackageTemplate):
|
||||
"""Provides appropriate overrides for CMake-based packages"""
|
||||
|
||||
@@ -186,6 +194,14 @@ def cmake_args(self):
|
||||
return args"""
|
||||
|
||||
|
||||
class GoPackageTemplate(PackageTemplate):
|
||||
"""Provides appropriate overrides for Go-module-based packages"""
|
||||
|
||||
base_class_name = "GoPackage"
|
||||
|
||||
body_def = ""
|
||||
|
||||
|
||||
class LuaPackageTemplate(PackageTemplate):
|
||||
"""Provides appropriate overrides for LuaRocks-based packages"""
|
||||
|
||||
@@ -575,28 +591,30 @@ def __init__(self, name, *args, **kwargs):
|
||||
|
||||
|
||||
templates = {
|
||||
"autotools": AutotoolsPackageTemplate,
|
||||
"autoreconf": AutoreconfPackageTemplate,
|
||||
"cmake": CMakePackageTemplate,
|
||||
"bundle": BundlePackageTemplate,
|
||||
"qmake": QMakePackageTemplate,
|
||||
"maven": MavenPackageTemplate,
|
||||
"scons": SconsPackageTemplate,
|
||||
"waf": WafPackageTemplate,
|
||||
"autotools": AutotoolsPackageTemplate,
|
||||
"bazel": BazelPackageTemplate,
|
||||
"bundle": BundlePackageTemplate,
|
||||
"cargo": CargoPackageTemplate,
|
||||
"cmake": CMakePackageTemplate,
|
||||
"generic": PackageTemplate,
|
||||
"go": GoPackageTemplate,
|
||||
"intel": IntelPackageTemplate,
|
||||
"lua": LuaPackageTemplate,
|
||||
"makefile": MakefilePackageTemplate,
|
||||
"maven": MavenPackageTemplate,
|
||||
"meson": MesonPackageTemplate,
|
||||
"octave": OctavePackageTemplate,
|
||||
"perlbuild": PerlbuildPackageTemplate,
|
||||
"perlmake": PerlmakePackageTemplate,
|
||||
"python": PythonPackageTemplate,
|
||||
"qmake": QMakePackageTemplate,
|
||||
"r": RPackageTemplate,
|
||||
"racket": RacketPackageTemplate,
|
||||
"perlmake": PerlmakePackageTemplate,
|
||||
"perlbuild": PerlbuildPackageTemplate,
|
||||
"octave": OctavePackageTemplate,
|
||||
"ruby": RubyPackageTemplate,
|
||||
"makefile": MakefilePackageTemplate,
|
||||
"intel": IntelPackageTemplate,
|
||||
"meson": MesonPackageTemplate,
|
||||
"lua": LuaPackageTemplate,
|
||||
"scons": SconsPackageTemplate,
|
||||
"sip": SIPPackageTemplate,
|
||||
"generic": PackageTemplate,
|
||||
"waf": WafPackageTemplate,
|
||||
}
|
||||
|
||||
|
||||
@@ -679,6 +697,8 @@ def __call__(self, stage, url):
|
||||
clues = [
|
||||
(r"/CMakeLists\.txt$", "cmake"),
|
||||
(r"/NAMESPACE$", "r"),
|
||||
(r"/Cargo\.toml$", "cargo"),
|
||||
(r"/go\.mod$", "go"),
|
||||
(r"/configure$", "autotools"),
|
||||
(r"/configure\.(in|ac)$", "autoreconf"),
|
||||
(r"/Makefile\.am$", "autoreconf"),
|
||||
|
@@ -10,10 +10,10 @@
|
||||
import llnl.util.tty as tty
|
||||
|
||||
import spack.cmd
|
||||
import spack.cmd.common.arguments as arguments
|
||||
import spack.cmd.common.confirmation as confirmation
|
||||
import spack.environment as ev
|
||||
import spack.spec
|
||||
from spack.cmd.common import arguments
|
||||
|
||||
description = "remove specs from the concretized lockfile of an environment"
|
||||
section = "environments"
|
||||
|
@@ -9,11 +9,11 @@
|
||||
from llnl.util.tty.colify import colify
|
||||
|
||||
import spack.cmd
|
||||
import spack.cmd.common.arguments as arguments
|
||||
import spack.environment as ev
|
||||
import spack.package_base
|
||||
import spack.repo
|
||||
import spack.store
|
||||
from spack.cmd.common import arguments
|
||||
|
||||
description = "show dependencies of a package"
|
||||
section = "basic"
|
||||
|
@@ -9,10 +9,10 @@
|
||||
from llnl.util.tty.colify import colify
|
||||
|
||||
import spack.cmd
|
||||
import spack.cmd.common.arguments as arguments
|
||||
import spack.environment as ev
|
||||
import spack.repo
|
||||
import spack.store
|
||||
from spack.cmd.common import arguments
|
||||
|
||||
description = "show packages that depend on another"
|
||||
section = "basic"
|
||||
|
@@ -20,9 +20,9 @@
|
||||
from llnl.util.symlink import symlink
|
||||
|
||||
import spack.cmd
|
||||
import spack.cmd.common.arguments as arguments
|
||||
import spack.environment as ev
|
||||
import spack.store
|
||||
from spack.cmd.common import arguments
|
||||
from spack.database import InstallStatuses
|
||||
from spack.error import SpackError
|
||||
|
||||
|
@@ -9,9 +9,9 @@
|
||||
import llnl.util.tty as tty
|
||||
|
||||
import spack.cmd
|
||||
import spack.cmd.common.arguments as arguments
|
||||
import spack.config
|
||||
import spack.repo
|
||||
from spack.cmd.common import arguments
|
||||
|
||||
description = "developer build: build from code in current working directory"
|
||||
section = "build"
|
||||
|
@@ -8,10 +8,10 @@
|
||||
import llnl.util.tty as tty
|
||||
|
||||
import spack.cmd
|
||||
import spack.cmd.common.arguments as arguments
|
||||
import spack.spec
|
||||
import spack.util.path
|
||||
import spack.version
|
||||
from spack.cmd.common import arguments
|
||||
from spack.error import SpackError
|
||||
|
||||
description = "add a spec to an environment's dev-build information"
|
||||
|
@@ -10,11 +10,11 @@
|
||||
from llnl.util.tty.color import cprint, get_color_when
|
||||
|
||||
import spack.cmd
|
||||
import spack.cmd.common.arguments as arguments
|
||||
import spack.environment as ev
|
||||
import spack.solver.asp as asp
|
||||
import spack.util.environment
|
||||
import spack.util.spack_json as sjson
|
||||
from spack.cmd.common import arguments
|
||||
|
||||
description = "compare two specs"
|
||||
section = "basic"
|
||||
@@ -200,6 +200,8 @@ def diff(parser, args):
|
||||
|
||||
specs = []
|
||||
for spec in spack.cmd.parse_specs(args.specs):
|
||||
# If the spec has a hash, check it before disambiguating
|
||||
spec.replace_hash()
|
||||
if spec.concrete:
|
||||
specs.append(spec)
|
||||
else:
|
||||
|
@@ -20,7 +20,6 @@
|
||||
import spack.cmd
|
||||
import spack.cmd.common
|
||||
import spack.cmd.common.arguments
|
||||
import spack.cmd.common.arguments as arguments
|
||||
import spack.cmd.install
|
||||
import spack.cmd.modules
|
||||
import spack.cmd.uninstall
|
||||
@@ -31,6 +30,7 @@
|
||||
import spack.schema.env
|
||||
import spack.spec
|
||||
import spack.tengine
|
||||
from spack.cmd.common import arguments
|
||||
from spack.util.environment import EnvironmentModifications
|
||||
|
||||
description = "manage virtual environments"
|
||||
|
@@ -10,10 +10,10 @@
|
||||
from llnl.util.tty.colify import colify
|
||||
|
||||
import spack.cmd as cmd
|
||||
import spack.cmd.common.arguments as arguments
|
||||
import spack.environment as ev
|
||||
import spack.repo
|
||||
import spack.store
|
||||
from spack.cmd.common import arguments
|
||||
|
||||
description = "list extensions for package"
|
||||
section = "extensions"
|
||||
|
@@ -14,12 +14,12 @@
|
||||
|
||||
import spack
|
||||
import spack.cmd
|
||||
import spack.cmd.common.arguments
|
||||
import spack.config
|
||||
import spack.cray_manifest as cray_manifest
|
||||
import spack.detection
|
||||
import spack.error
|
||||
import spack.util.environment
|
||||
from spack.cmd.common import arguments
|
||||
|
||||
description = "manage external packages in Spack configuration"
|
||||
section = "config"
|
||||
@@ -29,8 +29,6 @@
|
||||
def setup_parser(subparser):
|
||||
sp = subparser.add_subparsers(metavar="SUBCOMMAND", dest="external_command")
|
||||
|
||||
scopes = spack.config.scopes()
|
||||
|
||||
find_parser = sp.add_parser("find", help="add external packages to packages.yaml")
|
||||
find_parser.add_argument(
|
||||
"--not-buildable",
|
||||
@@ -48,15 +46,14 @@ def setup_parser(subparser):
|
||||
)
|
||||
find_parser.add_argument(
|
||||
"--scope",
|
||||
choices=scopes,
|
||||
metavar=spack.config.SCOPES_METAVAR,
|
||||
default=spack.config.default_modify_scope("packages"),
|
||||
action=arguments.ConfigScope,
|
||||
default=lambda: spack.config.default_modify_scope("packages"),
|
||||
help="configuration scope to modify",
|
||||
)
|
||||
find_parser.add_argument(
|
||||
"--all", action="store_true", help="search for all packages that Spack knows about"
|
||||
)
|
||||
spack.cmd.common.arguments.add_common_arguments(find_parser, ["tags", "jobs"])
|
||||
arguments.add_common_arguments(find_parser, ["tags", "jobs"])
|
||||
find_parser.add_argument("packages", nargs=argparse.REMAINDER)
|
||||
find_parser.epilog = (
|
||||
'The search is by default on packages tagged with the "build-tools" or '
|
||||
|
@@ -6,11 +6,11 @@
|
||||
import llnl.util.tty as tty
|
||||
|
||||
import spack.cmd
|
||||
import spack.cmd.common.arguments as arguments
|
||||
import spack.config
|
||||
import spack.environment as ev
|
||||
import spack.repo
|
||||
import spack.traverse
|
||||
from spack.cmd.common import arguments
|
||||
|
||||
description = "fetch archives for packages"
|
||||
section = "build"
|
||||
|
@@ -12,9 +12,9 @@
|
||||
|
||||
import spack.bootstrap
|
||||
import spack.cmd as cmd
|
||||
import spack.cmd.common.arguments as arguments
|
||||
import spack.environment as ev
|
||||
import spack.repo
|
||||
from spack.cmd.common import arguments
|
||||
from spack.database import InstallStatuses
|
||||
|
||||
description = "list and search installed packages"
|
||||
|
@@ -7,11 +7,11 @@
|
||||
import os
|
||||
|
||||
import spack.binary_distribution
|
||||
import spack.cmd.common.arguments as arguments
|
||||
import spack.mirror
|
||||
import spack.paths
|
||||
import spack.util.gpg
|
||||
import spack.util.url
|
||||
from spack.cmd.common import arguments
|
||||
|
||||
description = "handle GPG actions for spack"
|
||||
section = "packaging"
|
||||
|
@@ -5,10 +5,10 @@
|
||||
from llnl.util import tty
|
||||
|
||||
import spack.cmd
|
||||
import spack.cmd.common.arguments as arguments
|
||||
import spack.config
|
||||
import spack.environment as ev
|
||||
import spack.store
|
||||
from spack.cmd.common import arguments
|
||||
from spack.graph import DAGWithDependencyTypes, SimpleDAG, graph_ascii, graph_dot, static_graph_dot
|
||||
|
||||
description = "generate graphs of package dependency relationships"
|
||||
@@ -61,7 +61,7 @@ def graph(parser, args):
|
||||
args.dot = True
|
||||
env = ev.active_environment()
|
||||
if env:
|
||||
specs = env.all_specs()
|
||||
specs = env.concrete_roots()
|
||||
else:
|
||||
specs = spack.store.STORE.db.query()
|
||||
|
||||
|
@@ -11,13 +11,13 @@
|
||||
import llnl.util.tty.color as color
|
||||
from llnl.util.tty.colify import colify
|
||||
|
||||
import spack.cmd.common.arguments as arguments
|
||||
import spack.deptypes as dt
|
||||
import spack.fetch_strategy as fs
|
||||
import spack.install_test
|
||||
import spack.repo
|
||||
import spack.spec
|
||||
import spack.version
|
||||
from spack.cmd.common import arguments
|
||||
from spack.package_base import preferred_version
|
||||
|
||||
description = "get detailed information on a particular package"
|
||||
@@ -139,7 +139,7 @@ def lines(self):
|
||||
yield " " + self.fmt % t
|
||||
|
||||
|
||||
def print_dependencies(pkg):
|
||||
def print_dependencies(pkg, args):
|
||||
"""output build, link, and run package dependencies"""
|
||||
|
||||
for deptype in ("build", "link", "run"):
|
||||
@@ -152,7 +152,7 @@ def print_dependencies(pkg):
|
||||
color.cprint(" None")
|
||||
|
||||
|
||||
def print_detectable(pkg):
|
||||
def print_detectable(pkg, args):
|
||||
"""output information on external detection"""
|
||||
|
||||
color.cprint("")
|
||||
@@ -180,7 +180,7 @@ def print_detectable(pkg):
|
||||
color.cprint(" False")
|
||||
|
||||
|
||||
def print_maintainers(pkg):
|
||||
def print_maintainers(pkg, args):
|
||||
"""output package maintainers"""
|
||||
|
||||
if len(pkg.maintainers) > 0:
|
||||
@@ -189,7 +189,7 @@ def print_maintainers(pkg):
|
||||
color.cprint(section_title("Maintainers: ") + mnt)
|
||||
|
||||
|
||||
def print_phases(pkg):
|
||||
def print_phases(pkg, args):
|
||||
"""output installation phases"""
|
||||
|
||||
if hasattr(pkg.builder, "phases") and pkg.builder.phases:
|
||||
@@ -201,7 +201,7 @@ def print_phases(pkg):
|
||||
color.cprint(phase_str)
|
||||
|
||||
|
||||
def print_tags(pkg):
|
||||
def print_tags(pkg, args):
|
||||
"""output package tags"""
|
||||
|
||||
color.cprint("")
|
||||
@@ -213,7 +213,7 @@ def print_tags(pkg):
|
||||
color.cprint(" None")
|
||||
|
||||
|
||||
def print_tests(pkg):
|
||||
def print_tests(pkg, args):
|
||||
"""output relevant build-time and stand-alone tests"""
|
||||
|
||||
# Some built-in base packages (e.g., Autotools) define callback (e.g.,
|
||||
@@ -327,7 +327,7 @@ def _variants_by_name_when(pkg):
|
||||
"""Adaptor to get variants keyed by { name: { when: { [Variant...] } }."""
|
||||
# TODO: replace with pkg.variants_by_name(when=True) when unified directive dicts are merged.
|
||||
variants = {}
|
||||
for name, (variant, whens) in pkg.variants.items():
|
||||
for name, (variant, whens) in sorted(pkg.variants.items()):
|
||||
for when in whens:
|
||||
variants.setdefault(name, {}).setdefault(when, []).append(variant)
|
||||
return variants
|
||||
@@ -407,12 +407,15 @@ def print_variants_by_name(pkg):
|
||||
sys.stdout.write("\n")
|
||||
|
||||
|
||||
def print_variants(pkg):
|
||||
def print_variants(pkg, args):
|
||||
"""output variants"""
|
||||
print_variants_grouped_by_when(pkg)
|
||||
if args.variants_by_name:
|
||||
print_variants_by_name(pkg)
|
||||
else:
|
||||
print_variants_grouped_by_when(pkg)
|
||||
|
||||
|
||||
def print_versions(pkg):
|
||||
def print_versions(pkg, args):
|
||||
"""output versions"""
|
||||
|
||||
color.cprint("")
|
||||
@@ -465,7 +468,7 @@ def get_url(version):
|
||||
color.cprint(line)
|
||||
|
||||
|
||||
def print_virtuals(pkg):
|
||||
def print_virtuals(pkg, args):
|
||||
"""output virtual packages"""
|
||||
|
||||
color.cprint("")
|
||||
@@ -488,7 +491,7 @@ def print_virtuals(pkg):
|
||||
color.cprint(" None")
|
||||
|
||||
|
||||
def print_licenses(pkg):
|
||||
def print_licenses(pkg, args):
|
||||
"""Output the licenses of the project."""
|
||||
|
||||
color.cprint("")
|
||||
@@ -523,17 +526,13 @@ def info(parser, args):
|
||||
if getattr(pkg, "homepage"):
|
||||
color.cprint(section_title("Homepage: ") + pkg.homepage)
|
||||
|
||||
_print_variants = (
|
||||
print_variants_by_name if args.variants_by_name else print_variants_grouped_by_when
|
||||
)
|
||||
|
||||
# Now output optional information in expected order
|
||||
sections = [
|
||||
(args.all or args.maintainers, print_maintainers),
|
||||
(args.all or args.detectable, print_detectable),
|
||||
(args.all or args.tags, print_tags),
|
||||
(args.all or not args.no_versions, print_versions),
|
||||
(args.all or not args.no_variants, _print_variants),
|
||||
(args.all or not args.no_variants, print_variants),
|
||||
(args.all or args.phases, print_phases),
|
||||
(args.all or not args.no_dependencies, print_dependencies),
|
||||
(args.all or args.virtuals, print_virtuals),
|
||||
@@ -542,6 +541,6 @@ def info(parser, args):
|
||||
]
|
||||
for print_it, func in sections:
|
||||
if print_it:
|
||||
func(pkg)
|
||||
func(pkg, args)
|
||||
|
||||
color.cprint("")
|
||||
|
@@ -14,7 +14,6 @@
|
||||
|
||||
import spack.build_environment
|
||||
import spack.cmd
|
||||
import spack.cmd.common.arguments as arguments
|
||||
import spack.config
|
||||
import spack.environment as ev
|
||||
import spack.fetch_strategy
|
||||
@@ -23,6 +22,7 @@
|
||||
import spack.report
|
||||
import spack.spec
|
||||
import spack.store
|
||||
from spack.cmd.common import arguments
|
||||
from spack.error import SpackError
|
||||
from spack.installer import PackageInstaller
|
||||
|
||||
|
@@ -15,9 +15,9 @@
|
||||
import llnl.util.tty as tty
|
||||
from llnl.util.tty.colify import colify
|
||||
|
||||
import spack.cmd.common.arguments as arguments
|
||||
import spack.deptypes as dt
|
||||
import spack.repo
|
||||
from spack.cmd.common import arguments
|
||||
from spack.version import VersionList
|
||||
|
||||
description = "list and search available packages"
|
||||
|
@@ -8,12 +8,12 @@
|
||||
import llnl.util.tty as tty
|
||||
|
||||
import spack.cmd
|
||||
import spack.cmd.common.arguments as arguments
|
||||
import spack.cmd.find
|
||||
import spack.environment as ev
|
||||
import spack.store
|
||||
import spack.user_environment as uenv
|
||||
import spack.util.environment
|
||||
from spack.cmd.common import arguments
|
||||
|
||||
description = "add package to the user environment"
|
||||
section = "user environment"
|
||||
|
@@ -9,11 +9,11 @@
|
||||
|
||||
import spack.builder
|
||||
import spack.cmd
|
||||
import spack.cmd.common.arguments as arguments
|
||||
import spack.environment as ev
|
||||
import spack.paths
|
||||
import spack.repo
|
||||
import spack.stage
|
||||
from spack.cmd.common import arguments
|
||||
|
||||
description = "print out locations of packages and spack directories"
|
||||
section = "basic"
|
||||
|
@@ -8,11 +8,11 @@
|
||||
from llnl.util import tty
|
||||
|
||||
import spack.cmd
|
||||
import spack.cmd.common.arguments as arguments
|
||||
import spack.error
|
||||
import spack.package_base
|
||||
import spack.repo
|
||||
import spack.store
|
||||
from spack.cmd.common import arguments
|
||||
from spack.database import InstallStatuses
|
||||
|
||||
description = "mark packages as explicitly or implicitly installed"
|
||||
|
@@ -11,7 +11,6 @@
|
||||
|
||||
import spack.caches
|
||||
import spack.cmd
|
||||
import spack.cmd.common.arguments as arguments
|
||||
import spack.concretize
|
||||
import spack.config
|
||||
import spack.environment as ev
|
||||
@@ -20,6 +19,7 @@
|
||||
import spack.spec
|
||||
import spack.util.path
|
||||
import spack.util.web as web_util
|
||||
from spack.cmd.common import arguments
|
||||
from spack.error import SpackError
|
||||
|
||||
description = "manage mirrors (source and binary)"
|
||||
@@ -88,18 +88,14 @@ def setup_parser(subparser):
|
||||
"--mirror-url", metavar="mirror_url", type=str, help="find mirror to destroy by url"
|
||||
)
|
||||
|
||||
# used to construct scope arguments below
|
||||
scopes = spack.config.scopes()
|
||||
|
||||
# Add
|
||||
add_parser = sp.add_parser("add", help=mirror_add.__doc__)
|
||||
add_parser.add_argument("name", help="mnemonic name for mirror", metavar="mirror")
|
||||
add_parser.add_argument("url", help="url of mirror directory from 'spack mirror create'")
|
||||
add_parser.add_argument(
|
||||
"--scope",
|
||||
choices=scopes,
|
||||
metavar=spack.config.SCOPES_METAVAR,
|
||||
default=spack.config.default_modify_scope(),
|
||||
action=arguments.ConfigScope,
|
||||
default=lambda: spack.config.default_modify_scope(),
|
||||
help="configuration scope to modify",
|
||||
)
|
||||
add_parser.add_argument(
|
||||
@@ -117,9 +113,8 @@ def setup_parser(subparser):
|
||||
remove_parser.add_argument("name", help="mnemonic name for mirror", metavar="mirror")
|
||||
remove_parser.add_argument(
|
||||
"--scope",
|
||||
choices=scopes,
|
||||
metavar=spack.config.SCOPES_METAVAR,
|
||||
default=spack.config.default_modify_scope(),
|
||||
action=arguments.ConfigScope,
|
||||
default=lambda: spack.config.default_modify_scope(),
|
||||
help="configuration scope to modify",
|
||||
)
|
||||
|
||||
@@ -136,9 +131,8 @@ def setup_parser(subparser):
|
||||
)
|
||||
set_url_parser.add_argument(
|
||||
"--scope",
|
||||
choices=scopes,
|
||||
metavar=spack.config.SCOPES_METAVAR,
|
||||
default=spack.config.default_modify_scope(),
|
||||
action=arguments.ConfigScope,
|
||||
default=lambda: spack.config.default_modify_scope(),
|
||||
help="configuration scope to modify",
|
||||
)
|
||||
arguments.add_connection_args(set_url_parser, False)
|
||||
@@ -165,9 +159,8 @@ def setup_parser(subparser):
|
||||
set_parser.add_argument("--url", help="url of mirror directory from 'spack mirror create'")
|
||||
set_parser.add_argument(
|
||||
"--scope",
|
||||
choices=scopes,
|
||||
metavar=spack.config.SCOPES_METAVAR,
|
||||
default=spack.config.default_modify_scope(),
|
||||
action=arguments.ConfigScope,
|
||||
default=lambda: spack.config.default_modify_scope(),
|
||||
help="configuration scope to modify",
|
||||
)
|
||||
arguments.add_connection_args(set_parser, False)
|
||||
@@ -176,9 +169,8 @@ def setup_parser(subparser):
|
||||
list_parser = sp.add_parser("list", help=mirror_list.__doc__)
|
||||
list_parser.add_argument(
|
||||
"--scope",
|
||||
choices=scopes,
|
||||
metavar=spack.config.SCOPES_METAVAR,
|
||||
default=spack.config.default_list_scope(),
|
||||
action=arguments.ConfigScope,
|
||||
default=lambda: spack.config.default_list_scope(),
|
||||
help="configuration scope to read from",
|
||||
)
|
||||
|
||||
|
@@ -14,11 +14,11 @@
|
||||
from llnl.util.tty import color
|
||||
|
||||
import spack.cmd
|
||||
import spack.cmd.common.arguments as arguments
|
||||
import spack.config
|
||||
import spack.modules
|
||||
import spack.modules.common
|
||||
import spack.repo
|
||||
from spack.cmd.common import arguments
|
||||
|
||||
description = "manipulate module files"
|
||||
section = "environment"
|
||||
|
@@ -6,12 +6,12 @@
|
||||
import llnl.util.tty as tty
|
||||
|
||||
import spack.cmd
|
||||
import spack.cmd.common.arguments as arguments
|
||||
import spack.config
|
||||
import spack.environment as ev
|
||||
import spack.package_base
|
||||
import spack.repo
|
||||
import spack.traverse
|
||||
from spack.cmd.common import arguments
|
||||
|
||||
description = "patch expanded archive sources in preparation for install"
|
||||
section = "build"
|
||||
|
@@ -12,11 +12,11 @@
|
||||
from llnl.util.tty.colify import colify
|
||||
|
||||
import spack.cmd
|
||||
import spack.cmd.common.arguments as arguments
|
||||
import spack.paths
|
||||
import spack.repo
|
||||
import spack.util.executable as exe
|
||||
import spack.util.package_hash as ph
|
||||
from spack.cmd.common import arguments
|
||||
|
||||
description = "query packages associated with particular git revisions"
|
||||
section = "developer"
|
||||
|
@@ -6,7 +6,7 @@
|
||||
import llnl.util.tty as tty
|
||||
|
||||
import spack.cmd
|
||||
import spack.cmd.common.arguments as arguments
|
||||
from spack.cmd.common import arguments
|
||||
|
||||
description = "remove specs from an environment"
|
||||
section = "environments"
|
||||
|
@@ -11,6 +11,7 @@
|
||||
import spack.config
|
||||
import spack.repo
|
||||
import spack.util.path
|
||||
from spack.cmd.common import arguments
|
||||
|
||||
description = "manage package source repositories"
|
||||
section = "config"
|
||||
@@ -19,7 +20,6 @@
|
||||
|
||||
def setup_parser(subparser):
|
||||
sp = subparser.add_subparsers(metavar="SUBCOMMAND", dest="repo_command")
|
||||
scopes = spack.config.scopes()
|
||||
|
||||
# Create
|
||||
create_parser = sp.add_parser("create", help=repo_create.__doc__)
|
||||
@@ -43,9 +43,8 @@ def setup_parser(subparser):
|
||||
list_parser = sp.add_parser("list", help=repo_list.__doc__)
|
||||
list_parser.add_argument(
|
||||
"--scope",
|
||||
choices=scopes,
|
||||
metavar=spack.config.SCOPES_METAVAR,
|
||||
default=spack.config.default_list_scope(),
|
||||
action=arguments.ConfigScope,
|
||||
default=lambda: spack.config.default_list_scope(),
|
||||
help="configuration scope to read from",
|
||||
)
|
||||
|
||||
@@ -54,9 +53,8 @@ def setup_parser(subparser):
|
||||
add_parser.add_argument("path", help="path to a Spack package repository directory")
|
||||
add_parser.add_argument(
|
||||
"--scope",
|
||||
choices=scopes,
|
||||
metavar=spack.config.SCOPES_METAVAR,
|
||||
default=spack.config.default_modify_scope(),
|
||||
action=arguments.ConfigScope,
|
||||
default=lambda: spack.config.default_modify_scope(),
|
||||
help="configuration scope to modify",
|
||||
)
|
||||
|
||||
@@ -67,9 +65,8 @@ def setup_parser(subparser):
|
||||
)
|
||||
remove_parser.add_argument(
|
||||
"--scope",
|
||||
choices=scopes,
|
||||
metavar=spack.config.SCOPES_METAVAR,
|
||||
default=spack.config.default_modify_scope(),
|
||||
action=arguments.ConfigScope,
|
||||
default=lambda: spack.config.default_modify_scope(),
|
||||
help="configuration scope to modify",
|
||||
)
|
||||
|
||||
|
@@ -6,8 +6,8 @@
|
||||
import llnl.util.tty as tty
|
||||
|
||||
import spack.cmd
|
||||
import spack.cmd.common.arguments as arguments
|
||||
import spack.repo
|
||||
from spack.cmd.common import arguments
|
||||
|
||||
description = "revert checked out package source code"
|
||||
section = "build"
|
||||
|
@@ -12,12 +12,12 @@
|
||||
|
||||
import spack
|
||||
import spack.cmd
|
||||
import spack.cmd.common.arguments as arguments
|
||||
import spack.config
|
||||
import spack.environment
|
||||
import spack.hash_types as ht
|
||||
import spack.package_base
|
||||
import spack.solver.asp as asp
|
||||
from spack.cmd.common import arguments
|
||||
|
||||
description = "concretize a specs using an ASP solver"
|
||||
section = "developer"
|
||||
|
@@ -10,11 +10,11 @@
|
||||
|
||||
import spack
|
||||
import spack.cmd
|
||||
import spack.cmd.common.arguments as arguments
|
||||
import spack.environment as ev
|
||||
import spack.hash_types as ht
|
||||
import spack.spec
|
||||
import spack.store
|
||||
from spack.cmd.common import arguments
|
||||
|
||||
description = "show what would be installed, given a spec"
|
||||
section = "build"
|
||||
|
@@ -8,13 +8,13 @@
|
||||
import llnl.util.tty as tty
|
||||
|
||||
import spack.cmd
|
||||
import spack.cmd.common.arguments as arguments
|
||||
import spack.config
|
||||
import spack.environment as ev
|
||||
import spack.package_base
|
||||
import spack.repo
|
||||
import spack.stage
|
||||
import spack.traverse
|
||||
from spack.cmd.common import arguments
|
||||
|
||||
description = "expand downloaded archive in preparation for install"
|
||||
section = "build"
|
||||
|
@@ -15,12 +15,12 @@
|
||||
from llnl.util.tty import colify
|
||||
|
||||
import spack.cmd
|
||||
import spack.cmd.common.arguments as arguments
|
||||
import spack.environment as ev
|
||||
import spack.install_test
|
||||
import spack.package_base
|
||||
import spack.repo
|
||||
import spack.report
|
||||
from spack.cmd.common import arguments
|
||||
|
||||
description = "run spack's tests for an install"
|
||||
section = "admin"
|
||||
|
@@ -10,11 +10,11 @@
|
||||
from llnl.util.filesystem import working_dir
|
||||
|
||||
import spack
|
||||
import spack.cmd.common.arguments as arguments
|
||||
import spack.config
|
||||
import spack.paths
|
||||
import spack.util.git
|
||||
import spack.util.gpg
|
||||
from spack.cmd.common import arguments
|
||||
from spack.util.spack_yaml import syaml_dict
|
||||
|
||||
description = "set up spack for our tutorial (WARNING: modifies config!)"
|
||||
|
@@ -6,7 +6,7 @@
|
||||
import llnl.util.tty as tty
|
||||
|
||||
import spack.cmd
|
||||
import spack.cmd.common.arguments as arguments
|
||||
from spack.cmd.common import arguments
|
||||
|
||||
description = "remove specs from an environment"
|
||||
section = "environments"
|
||||
|
@@ -10,13 +10,13 @@
|
||||
from llnl.util.tty.colify import colify
|
||||
|
||||
import spack.cmd
|
||||
import spack.cmd.common.arguments as arguments
|
||||
import spack.cmd.common.confirmation as confirmation
|
||||
import spack.environment as ev
|
||||
import spack.package_base
|
||||
import spack.spec
|
||||
import spack.store
|
||||
import spack.traverse as traverse
|
||||
from spack.cmd.common import arguments
|
||||
from spack.database import InstallStatuses
|
||||
|
||||
description = "remove installed packages"
|
||||
|
@@ -227,9 +227,7 @@ def unit_test(parser, args, unknown_args):
|
||||
# has been used, then test that extension.
|
||||
pytest_root = spack.paths.spack_root
|
||||
if args.extension:
|
||||
target = args.extension
|
||||
extensions = spack.extensions.get_extension_paths()
|
||||
pytest_root = spack.extensions.path_for_extension(target, *extensions)
|
||||
pytest_root = spack.extensions.load_extension(args.extension)
|
||||
|
||||
# pytest.ini lives in the root of the spack repository.
|
||||
with llnl.util.filesystem.working_dir(pytest_root):
|
||||
|
@@ -7,10 +7,10 @@
|
||||
import sys
|
||||
|
||||
import spack.cmd
|
||||
import spack.cmd.common.arguments as arguments
|
||||
import spack.error
|
||||
import spack.user_environment as uenv
|
||||
import spack.util.environment
|
||||
from spack.cmd.common import arguments
|
||||
|
||||
description = "remove package from the user environment"
|
||||
section = "user environment"
|
||||
|
@@ -8,9 +8,9 @@
|
||||
import llnl.util.tty as tty
|
||||
from llnl.util.tty.colify import colify
|
||||
|
||||
import spack.cmd.common.arguments as arguments
|
||||
import spack.repo
|
||||
import spack.spec
|
||||
from spack.cmd.common import arguments
|
||||
from spack.version import infinity_versions, ver
|
||||
|
||||
description = "list available versions of a package"
|
||||
|
@@ -154,6 +154,14 @@ def add_compilers_to_config(compilers, scope=None, init_config=True):
|
||||
"""
|
||||
compiler_config = get_compiler_config(scope, init_config)
|
||||
for compiler in compilers:
|
||||
if not compiler.cc:
|
||||
tty.debug(f"{compiler.spec} does not have a C compiler")
|
||||
if not compiler.cxx:
|
||||
tty.debug(f"{compiler.spec} does not have a C++ compiler")
|
||||
if not compiler.f77:
|
||||
tty.debug(f"{compiler.spec} does not have a Fortran77 compiler")
|
||||
if not compiler.fc:
|
||||
tty.debug(f"{compiler.spec} does not have a Fortran compiler")
|
||||
compiler_config.append(_to_dict(compiler))
|
||||
spack.config.set("compilers", compiler_config, scope=scope)
|
||||
|
||||
|
@@ -40,7 +40,6 @@ def debug_flags(self):
|
||||
"-gdwarf-5",
|
||||
"-gline-tables-only",
|
||||
"-gmodules",
|
||||
"-gz",
|
||||
"-g",
|
||||
]
|
||||
|
||||
|
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Reference in New Issue
Block a user