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3 Commits

Author SHA1 Message Date
Harmen Stoppels
29ec128583 tau: checksum (#33873) 2022-11-15 05:56:16 -08:00
akhursev
008041dea3 2022.3.1 oneAPI release promotion (#33742) 2022-11-08 11:22:44 -08:00
eugeneswalker
1b9e96dd5e hypre +rocm: needs explicit rocprim dep (#33745) 2022-11-08 11:15:55 -08:00
8394 changed files with 68352 additions and 65541 deletions

View File

@@ -19,13 +19,13 @@ jobs:
package-audits:
runs-on: ubuntu-latest
steps:
- uses: actions/checkout@ac593985615ec2ede58e132d2e21d2b1cbd6127c # @v2
- uses: actions/setup-python@d27e3f3d7c64b4bbf8e4abfb9b63b83e846e0435 # @v2
- uses: actions/checkout@93ea575cb5d8a053eaa0ac8fa3b40d7e05a33cc8 # @v2
- uses: actions/setup-python@13ae5bb136fac2878aff31522b9efb785519f984 # @v2
with:
python-version: ${{inputs.python_version}}
- name: Install Python packages
run: |
pip install --upgrade pip six setuptools pytest codecov coverage[toml]
pip install --upgrade pip six setuptools pytest codecov 'coverage[toml]<=6.2'
- name: Package audits (with coverage)
if: ${{ inputs.with_coverage == 'true' }}
run: |

View File

@@ -24,7 +24,7 @@ jobs:
make patch unzip which xz python3 python3-devel tree \
cmake bison bison-devel libstdc++-static
- name: Checkout
uses: actions/checkout@ac593985615ec2ede58e132d2e21d2b1cbd6127c
uses: actions/checkout@93ea575cb5d8a053eaa0ac8fa3b40d7e05a33cc8
with:
fetch-depth: 0
- name: Setup non-root user
@@ -62,7 +62,7 @@ jobs:
make patch unzip xz-utils python3 python3-dev tree \
cmake bison
- name: Checkout
uses: actions/checkout@ac593985615ec2ede58e132d2e21d2b1cbd6127c
uses: actions/checkout@93ea575cb5d8a053eaa0ac8fa3b40d7e05a33cc8
with:
fetch-depth: 0
- name: Setup non-root user
@@ -99,7 +99,7 @@ jobs:
bzip2 curl file g++ gcc gfortran git gnupg2 gzip \
make patch unzip xz-utils python3 python3-dev tree
- name: Checkout
uses: actions/checkout@ac593985615ec2ede58e132d2e21d2b1cbd6127c
uses: actions/checkout@93ea575cb5d8a053eaa0ac8fa3b40d7e05a33cc8
with:
fetch-depth: 0
- name: Setup non-root user
@@ -133,7 +133,7 @@ jobs:
make patch unzip which xz python3 python3-devel tree \
cmake bison
- name: Checkout
uses: actions/checkout@ac593985615ec2ede58e132d2e21d2b1cbd6127c
uses: actions/checkout@93ea575cb5d8a053eaa0ac8fa3b40d7e05a33cc8
with:
fetch-depth: 0
- name: Setup repo
@@ -158,7 +158,7 @@ jobs:
run: |
brew install cmake bison@2.7 tree
- name: Checkout
uses: actions/checkout@ac593985615ec2ede58e132d2e21d2b1cbd6127c
uses: actions/checkout@93ea575cb5d8a053eaa0ac8fa3b40d7e05a33cc8
- name: Bootstrap clingo
run: |
source share/spack/setup-env.sh
@@ -179,7 +179,7 @@ jobs:
run: |
brew install tree
- name: Checkout
uses: actions/checkout@ac593985615ec2ede58e132d2e21d2b1cbd6127c
uses: actions/checkout@93ea575cb5d8a053eaa0ac8fa3b40d7e05a33cc8
- name: Bootstrap clingo
run: |
set -ex
@@ -204,7 +204,7 @@ jobs:
runs-on: ubuntu-20.04
steps:
- name: Checkout
uses: actions/checkout@ac593985615ec2ede58e132d2e21d2b1cbd6127c
uses: actions/checkout@93ea575cb5d8a053eaa0ac8fa3b40d7e05a33cc8
with:
fetch-depth: 0
- name: Setup repo
@@ -214,7 +214,7 @@ jobs:
- name: Bootstrap clingo
run: |
set -ex
for ver in '3.6' '3.7' '3.8' '3.9' '3.10' ; do
for ver in '2.7' '3.6' '3.7' '3.8' '3.9' '3.10' ; do
not_found=1
ver_dir="$(find $RUNNER_TOOL_CACHE/Python -wholename "*/${ver}.*/*/bin" | grep . || true)"
echo "Testing $ver_dir"
@@ -247,7 +247,7 @@ jobs:
bzip2 curl file g++ gcc patchelf gfortran git gzip \
make patch unzip xz-utils python3 python3-dev tree
- name: Checkout
uses: actions/checkout@ac593985615ec2ede58e132d2e21d2b1cbd6127c
uses: actions/checkout@93ea575cb5d8a053eaa0ac8fa3b40d7e05a33cc8
with:
fetch-depth: 0
- name: Setup non-root user
@@ -283,7 +283,7 @@ jobs:
make patch unzip xz-utils python3 python3-dev tree \
gawk
- name: Checkout
uses: actions/checkout@ac593985615ec2ede58e132d2e21d2b1cbd6127c
uses: actions/checkout@93ea575cb5d8a053eaa0ac8fa3b40d7e05a33cc8
with:
fetch-depth: 0
- name: Setup non-root user
@@ -316,7 +316,7 @@ jobs:
# Remove GnuPG since we want to bootstrap it
sudo rm -rf /usr/local/bin/gpg
- name: Checkout
uses: actions/checkout@ac593985615ec2ede58e132d2e21d2b1cbd6127c
uses: actions/checkout@93ea575cb5d8a053eaa0ac8fa3b40d7e05a33cc8
- name: Bootstrap GnuPG
run: |
source share/spack/setup-env.sh
@@ -333,7 +333,7 @@ jobs:
# Remove GnuPG since we want to bootstrap it
sudo rm -rf /usr/local/bin/gpg
- name: Checkout
uses: actions/checkout@ac593985615ec2ede58e132d2e21d2b1cbd6127c
uses: actions/checkout@93ea575cb5d8a053eaa0ac8fa3b40d7e05a33cc8
- name: Bootstrap GnuPG
run: |
source share/spack/setup-env.sh

View File

@@ -50,7 +50,7 @@ jobs:
if: github.repository == 'spack/spack'
steps:
- name: Checkout
uses: actions/checkout@ac593985615ec2ede58e132d2e21d2b1cbd6127c # @v2
uses: actions/checkout@93ea575cb5d8a053eaa0ac8fa3b40d7e05a33cc8 # @v2
- name: Set Container Tag Normal (Nightly)
run: |
@@ -80,16 +80,16 @@ jobs:
fi
- name: Upload Dockerfile
uses: actions/upload-artifact@0b7f8abb1508181956e8e162db84b466c27e18ce
uses: actions/upload-artifact@3cea5372237819ed00197afe530f5a7ea3e805c8
with:
name: dockerfiles
path: dockerfiles
- name: Set up QEMU
uses: docker/setup-qemu-action@e81a89b1732b9c48d79cd809d8d81d79c4647a18 # @v1
uses: docker/setup-qemu-action@8b122486cedac8393e77aa9734c3528886e4a1a8 # @v1
- name: Set up Docker Buildx
uses: docker/setup-buildx-action@f03ac48505955848960e80bbb68046aa35c7b9e7 # @v1
uses: docker/setup-buildx-action@c74574e6c82eeedc46366be1b0d287eff9085eb6 # @v1
- name: Log in to GitHub Container Registry
uses: docker/login-action@f4ef78c080cd8ba55a85445d5b36e214a81df20a # @v1
@@ -106,7 +106,7 @@ jobs:
password: ${{ secrets.DOCKERHUB_TOKEN }}
- name: Build & Deploy ${{ matrix.dockerfile[0] }}
uses: docker/build-push-action@3b5e8027fcad23fda98b2e3ac259d8d67585f671 # @v2
uses: docker/build-push-action@c84f38281176d4c9cdb1626ffafcd6b3911b5d94 # @v2
with:
context: dockerfiles/${{ matrix.dockerfile[0] }}
platforms: ${{ matrix.dockerfile[1] }}

View File

@@ -20,6 +20,12 @@ jobs:
uses: ./.github/workflows/valid-style.yml
with:
with_coverage: ${{ needs.changes.outputs.core }}
audit-ancient-python:
uses: ./.github/workflows/audit.yaml
needs: [ changes ]
with:
with_coverage: ${{ needs.changes.outputs.core }}
python_version: 2.7
all-prechecks:
needs: [ prechecks ]
runs-on: ubuntu-latest
@@ -35,12 +41,12 @@ jobs:
core: ${{ steps.filter.outputs.core }}
packages: ${{ steps.filter.outputs.packages }}
steps:
- uses: actions/checkout@ac593985615ec2ede58e132d2e21d2b1cbd6127c # @v2
- uses: actions/checkout@93ea575cb5d8a053eaa0ac8fa3b40d7e05a33cc8 # @v2
if: ${{ github.event_name == 'push' }}
with:
fetch-depth: 0
# For pull requests it's not necessary to checkout the code
- uses: dorny/paths-filter@4512585405083f25c027a35db413c2b3b9006d50
- uses: dorny/paths-filter@b2feaf19c27470162a626bd6fa8438ae5b263721
id: filter
with:
# See https://github.com/dorny/paths-filter/issues/56 for the syntax used below
@@ -79,7 +85,7 @@ jobs:
needs: [ prechecks ]
uses: ./.github/workflows/windows_python.yml
all:
needs: [ windows, unit-tests, bootstrap ]
needs: [ windows, unit-tests, bootstrap, audit-ancient-python ]
runs-on: ubuntu-latest
steps:
- name: Success

View File

@@ -1,9 +1,15 @@
# (c) 2022 Lawrence Livermore National Laboratory
# (c) 2021 Lawrence Livermore National Laboratory
Set-Location spack
git config --global user.email "spack@example.com"
git config --global user.name "Test User"
git config --global core.longpaths true
# See https://github.com/git/git/security/advisories/GHSA-3wp6-j8xr-qw85 (CVE-2022-39253)
# This is needed to let some fixture in our unit-test suite run
git config --global protocol.file.allow always
if ($(git branch --show-current) -ne "develop")
{
git branch develop origin/develop

View File

@@ -2,6 +2,10 @@
git config --global user.email "spack@example.com"
git config --global user.name "Test User"
# See https://github.com/git/git/security/advisories/GHSA-3wp6-j8xr-qw85 (CVE-2022-39253)
# This is needed to let some fixture in our unit-test suite run
git config --global protocol.file.allow always
# create a local pr base branch
if [[ -n $GITHUB_BASE_REF ]]; then
git fetch origin "${GITHUB_BASE_REF}:${GITHUB_BASE_REF}"

View File

@@ -11,46 +11,36 @@ concurrency:
jobs:
# Run unit tests with different configurations on linux
ubuntu:
runs-on: ${{ matrix.os }}
runs-on: ubuntu-latest
strategy:
matrix:
os: [ubuntu-latest]
python-version: ['3.7', '3.8', '3.9', '3.10', '3.11']
python-version: ['2.7', '3.6', '3.7', '3.8', '3.9', '3.10']
concretizer: ['clingo']
on_develop:
- ${{ github.ref == 'refs/heads/develop' }}
include:
- python-version: '3.11'
os: ubuntu-latest
- python-version: 2.7
concretizer: original
on_develop: ${{ github.ref == 'refs/heads/develop' }}
- python-version: '3.6'
os: ubuntu-20.04
concretizer: clingo
- python-version: '3.10'
concretizer: original
on_develop: ${{ github.ref == 'refs/heads/develop' }}
exclude:
- python-version: '3.7'
os: ubuntu-latest
concretizer: 'clingo'
on_develop: false
- python-version: '3.8'
os: ubuntu-latest
concretizer: 'clingo'
on_develop: false
- python-version: '3.9'
os: ubuntu-latest
concretizer: 'clingo'
on_develop: false
- python-version: '3.10'
os: ubuntu-latest
concretizer: 'clingo'
on_develop: false
steps:
- uses: actions/checkout@ac593985615ec2ede58e132d2e21d2b1cbd6127c # @v2
- uses: actions/checkout@93ea575cb5d8a053eaa0ac8fa3b40d7e05a33cc8 # @v2
with:
fetch-depth: 0
- uses: actions/setup-python@d27e3f3d7c64b4bbf8e4abfb9b63b83e846e0435 # @v2
- uses: actions/setup-python@13ae5bb136fac2878aff31522b9efb785519f984 # @v2
with:
python-version: ${{ matrix.python-version }}
- name: Install System packages
@@ -59,11 +49,24 @@ jobs:
# Needed for unit tests
sudo apt-get -y install \
coreutils cvs gfortran graphviz gnupg2 mercurial ninja-build \
cmake bison libbison-dev kcov
patchelf cmake bison libbison-dev kcov
- name: Install Python packages
run: |
pip install --upgrade pip six setuptools pytest codecov[toml] pytest-xdist pytest-cov
pip install --upgrade flake8 "isort>=4.3.5" "mypy>=0.900" "click" "black"
pip install --upgrade pip six setuptools pytest codecov[toml] pytest-xdist
# Install pytest-cov only on recent Python, to avoid stalling on Python 2.7 due
# to bugs on an unmaintained version of the package when used with xdist.
if [[ ${{ matrix.python-version }} != "2.7" ]]; then
pip install --upgrade pytest-cov
fi
# ensure style checks are not skipped in unit tests for python >= 3.6
# note that true/false (i.e., 1/0) are opposite in conditions in python and bash
if python -c 'import sys; sys.exit(not sys.version_info >= (3, 6))'; then
pip install --upgrade flake8 "isort>=4.3.5" "mypy>=0.900" "click==8.0.4" "black<=21.12b0"
fi
- name: Pin pathlib for Python 2.7
if: ${{ matrix.python-version == 2.7 }}
run: |
pip install -U pathlib2==2.3.6 toml
- name: Setup git configuration
run: |
# Need this for the git tests to succeed.
@@ -76,7 +79,6 @@ jobs:
run: |
. share/spack/setup-env.sh
spack bootstrap disable spack-install
spack bootstrap now
spack -v solve zlib
- name: Run unit tests
env:
@@ -84,7 +86,7 @@ jobs:
SPACK_TEST_SOLVER: ${{ matrix.concretizer }}
SPACK_TEST_PARALLEL: 2
COVERAGE: true
UNIT_TEST_COVERAGE: ${{ matrix.python-version == '3.11' }}
UNIT_TEST_COVERAGE: ${{ (matrix.python-version == '3.10') }}
run: |
share/spack/qa/run-unit-tests
- uses: codecov/codecov-action@d9f34f8cd5cb3b3eb79b3e4b5dae3a16df499a70
@@ -94,12 +96,12 @@ jobs:
shell:
runs-on: ubuntu-latest
steps:
- uses: actions/checkout@ac593985615ec2ede58e132d2e21d2b1cbd6127c # @v2
- uses: actions/checkout@93ea575cb5d8a053eaa0ac8fa3b40d7e05a33cc8 # @v2
with:
fetch-depth: 0
- uses: actions/setup-python@d27e3f3d7c64b4bbf8e4abfb9b63b83e846e0435 # @v2
- uses: actions/setup-python@13ae5bb136fac2878aff31522b9efb785519f984 # @v2
with:
python-version: '3.11'
python-version: '3.10'
- name: Install System packages
run: |
sudo apt-get -y update
@@ -107,7 +109,7 @@ jobs:
sudo apt-get install -y coreutils kcov csh zsh tcsh fish dash bash
- name: Install Python packages
run: |
pip install --upgrade pip six setuptools pytest codecov coverage[toml] pytest-xdist
pip install --upgrade pip six setuptools pytest codecov coverage[toml]==6.2 pytest-xdist
- name: Setup git configuration
run: |
# Need this for the git tests to succeed.
@@ -133,7 +135,7 @@ jobs:
dnf install -y \
bzip2 curl file gcc-c++ gcc gcc-gfortran git gnupg2 gzip \
make patch tcl unzip which xz
- uses: actions/checkout@ac593985615ec2ede58e132d2e21d2b1cbd6127c # @v2
- uses: actions/checkout@93ea575cb5d8a053eaa0ac8fa3b40d7e05a33cc8 # @v2
- name: Setup repo and non-root user
run: |
git --version
@@ -145,22 +147,25 @@ jobs:
shell: runuser -u spack-test -- bash {0}
run: |
source share/spack/setup-env.sh
spack -d bootstrap now --dev
spack -d solve zlib
spack unit-test -k 'not cvs and not svn and not hg' -x --verbose
# Test for the clingo based solver (using clingo-cffi)
clingo-cffi:
runs-on: ubuntu-latest
steps:
- uses: actions/checkout@ac593985615ec2ede58e132d2e21d2b1cbd6127c # @v2
- uses: actions/checkout@93ea575cb5d8a053eaa0ac8fa3b40d7e05a33cc8 # @v2
with:
fetch-depth: 0
- uses: actions/setup-python@d27e3f3d7c64b4bbf8e4abfb9b63b83e846e0435 # @v2
- uses: actions/setup-python@13ae5bb136fac2878aff31522b9efb785519f984 # @v2
with:
python-version: '3.11'
python-version: '3.10'
- name: Install System packages
run: |
sudo apt-get -y update
sudo apt-get -y install coreutils cvs gfortran graphviz gnupg2 mercurial ninja-build kcov
# Needed for unit tests
sudo apt-get -y install \
coreutils cvs gfortran graphviz gnupg2 mercurial ninja-build \
patchelf kcov
- name: Install Python packages
run: |
pip install --upgrade pip six setuptools pytest codecov coverage[toml] pytest-cov clingo pytest-xdist
@@ -185,10 +190,10 @@ jobs:
matrix:
python-version: ["3.10"]
steps:
- uses: actions/checkout@ac593985615ec2ede58e132d2e21d2b1cbd6127c # @v2
- uses: actions/checkout@93ea575cb5d8a053eaa0ac8fa3b40d7e05a33cc8 # @v2
with:
fetch-depth: 0
- uses: actions/setup-python@d27e3f3d7c64b4bbf8e4abfb9b63b83e846e0435 # @v2
- uses: actions/setup-python@13ae5bb136fac2878aff31522b9efb785519f984 # @v2
with:
python-version: ${{ matrix.python-version }}
- name: Install Python packages

View File

@@ -18,33 +18,33 @@ jobs:
validate:
runs-on: ubuntu-latest
steps:
- uses: actions/checkout@ac593985615ec2ede58e132d2e21d2b1cbd6127c # @v2
- uses: actions/setup-python@d27e3f3d7c64b4bbf8e4abfb9b63b83e846e0435 # @v2
- uses: actions/checkout@93ea575cb5d8a053eaa0ac8fa3b40d7e05a33cc8 # @v2
- uses: actions/setup-python@13ae5bb136fac2878aff31522b9efb785519f984 # @v2
with:
python-version: '3.11'
python-version: '3.10'
cache: 'pip'
- name: Install Python Packages
run: |
pip install --upgrade pip
pip install --upgrade vermin
- name: vermin (Spack's Core)
run: vermin --backport importlib --backport argparse --violations --backport typing -t=3.6- -vvv lib/spack/spack/ lib/spack/llnl/ bin/
run: vermin --backport argparse --violations --backport typing -t=2.7- -t=3.6- -vvv lib/spack/spack/ lib/spack/llnl/ bin/
- name: vermin (Repositories)
run: vermin --backport importlib --backport argparse --violations --backport typing -t=3.6- -vvv var/spack/repos
run: vermin --backport argparse --violations --backport typing -t=2.7- -t=3.6- -vvv var/spack/repos
# Run style checks on the files that have been changed
style:
runs-on: ubuntu-latest
steps:
- uses: actions/checkout@ac593985615ec2ede58e132d2e21d2b1cbd6127c # @v2
- uses: actions/checkout@93ea575cb5d8a053eaa0ac8fa3b40d7e05a33cc8 # @v2
with:
fetch-depth: 0
- uses: actions/setup-python@d27e3f3d7c64b4bbf8e4abfb9b63b83e846e0435 # @v2
- uses: actions/setup-python@13ae5bb136fac2878aff31522b9efb785519f984 # @v2
with:
python-version: '3.11'
python-version: '3.10'
cache: 'pip'
- name: Install Python packages
run: |
python3 -m pip install --upgrade pip six setuptools types-six black==22.12.0 mypy isort clingo flake8
python3 -m pip install --upgrade pip six setuptools types-six click==8.0.2 'black==21.12b0' mypy isort clingo flake8
- name: Setup git configuration
run: |
# Need this for the git tests to succeed.
@@ -57,4 +57,4 @@ jobs:
uses: ./.github/workflows/audit.yaml
with:
with_coverage: ${{ inputs.with_coverage }}
python_version: '3.11'
python_version: '3.10'

View File

@@ -10,15 +10,15 @@ concurrency:
defaults:
run:
shell:
powershell Invoke-Expression -Command "./share/spack/qa/windows_test_setup.ps1"; {0}
powershell Invoke-Expression -Command ".\share\spack\qa\windows_test_setup.ps1"; {0}
jobs:
unit-tests:
runs-on: windows-latest
steps:
- uses: actions/checkout@ac593985615ec2ede58e132d2e21d2b1cbd6127c
- uses: actions/checkout@93ea575cb5d8a053eaa0ac8fa3b40d7e05a33cc8
with:
fetch-depth: 0
- uses: actions/setup-python@d27e3f3d7c64b4bbf8e4abfb9b63b83e846e0435
- uses: actions/setup-python@13ae5bb136fac2878aff31522b9efb785519f984
with:
python-version: 3.9
- name: Install Python packages
@@ -26,11 +26,13 @@ jobs:
python -m pip install --upgrade pip six pywin32 setuptools codecov pytest-cov clingo
- name: Create local develop
run: |
./.github/workflows/setup_git.ps1
.\spack\.github\workflows\setup_git.ps1
- name: Unit Test
run: |
echo F|xcopy .\spack\share\spack\qa\configuration\windows_config.yaml $env:USERPROFILE\.spack\windows\config.yaml
cd spack
dir
spack unit-test -x --verbose --cov --cov-config=pyproject.toml --ignore=lib/spack/spack/test/cmd
./share/spack/qa/validate_last_exit.ps1
coverage combine -a
coverage xml
- uses: codecov/codecov-action@d9f34f8cd5cb3b3eb79b3e4b5dae3a16df499a70
@@ -39,10 +41,10 @@ jobs:
unit-tests-cmd:
runs-on: windows-latest
steps:
- uses: actions/checkout@ac593985615ec2ede58e132d2e21d2b1cbd6127c
- uses: actions/checkout@93ea575cb5d8a053eaa0ac8fa3b40d7e05a33cc8
with:
fetch-depth: 0
- uses: actions/setup-python@d27e3f3d7c64b4bbf8e4abfb9b63b83e846e0435
- uses: actions/setup-python@13ae5bb136fac2878aff31522b9efb785519f984
with:
python-version: 3.9
- name: Install Python packages
@@ -50,11 +52,12 @@ jobs:
python -m pip install --upgrade pip six pywin32 setuptools codecov coverage pytest-cov clingo
- name: Create local develop
run: |
./.github/workflows/setup_git.ps1
.\spack\.github\workflows\setup_git.ps1
- name: Command Unit Test
run: |
echo F|xcopy .\spack\share\spack\qa\configuration\windows_config.yaml $env:USERPROFILE\.spack\windows\config.yaml
cd spack
spack unit-test -x --verbose --cov --cov-config=pyproject.toml lib/spack/spack/test/cmd
./share/spack/qa/validate_last_exit.ps1
coverage combine -a
coverage xml
- uses: codecov/codecov-action@d9f34f8cd5cb3b3eb79b3e4b5dae3a16df499a70
@@ -63,10 +66,10 @@ jobs:
build-abseil:
runs-on: windows-latest
steps:
- uses: actions/checkout@ac593985615ec2ede58e132d2e21d2b1cbd6127c
- uses: actions/checkout@93ea575cb5d8a053eaa0ac8fa3b40d7e05a33cc8
with:
fetch-depth: 0
- uses: actions/setup-python@d27e3f3d7c64b4bbf8e4abfb9b63b83e846e0435
- uses: actions/setup-python@13ae5bb136fac2878aff31522b9efb785519f984
with:
python-version: 3.9
- name: Install Python packages
@@ -75,81 +78,81 @@ jobs:
- name: Build Test
run: |
spack compiler find
echo F|xcopy .\spack\share\spack\qa\configuration\windows_config.yaml $env:USERPROFILE\.spack\windows\config.yaml
spack external find cmake
spack external find ninja
spack -d install abseil-cpp
# TODO: johnwparent - reduce the size of the installer operations
# make-installer:
# runs-on: windows-latest
# steps:
# - name: Disable Windows Symlinks
# run: |
# git config --global core.symlinks false
# shell:
# powershell
# - uses: actions/checkout@ac593985615ec2ede58e132d2e21d2b1cbd6127c
# with:
# fetch-depth: 0
# - uses: actions/setup-python@d27e3f3d7c64b4bbf8e4abfb9b63b83e846e0435
# with:
# python-version: 3.9
# - name: Install Python packages
# run: |
# python -m pip install --upgrade pip six pywin32 setuptools
# - name: Add Light and Candle to Path
# run: |
# $env:WIX >> $GITHUB_PATH
# - name: Run Installer
# run: |
# ./share/spack/qa/setup_spack_installer.ps1
# spack make-installer -s . -g SILENT pkg
# echo "installer_root=$((pwd).Path)" | Out-File -FilePath $Env:GITHUB_ENV -Encoding utf8 -Append
# env:
# ProgressPreference: SilentlyContinue
# - uses: actions/upload-artifact@83fd05a356d7e2593de66fc9913b3002723633cb
# with:
# name: Windows Spack Installer Bundle
# path: ${{ env.installer_root }}\pkg\Spack.exe
# - uses: actions/upload-artifact@83fd05a356d7e2593de66fc9913b3002723633cb
# with:
# name: Windows Spack Installer
# path: ${{ env.installer_root}}\pkg\Spack.msi
# execute-installer:
# needs: make-installer
# runs-on: windows-latest
# defaults:
# run:
# shell: pwsh
# steps:
# - uses: actions/setup-python@d27e3f3d7c64b4bbf8e4abfb9b63b83e846e0435
# with:
# python-version: 3.9
# - name: Install Python packages
# run: |
# python -m pip install --upgrade pip six pywin32 setuptools
# - name: Setup installer directory
# run: |
# mkdir -p spack_installer
# echo "spack_installer=$((pwd).Path)\spack_installer" | Out-File -FilePath $Env:GITHUB_ENV -Encoding utf8 -Append
# - uses: actions/download-artifact@v3
# with:
# name: Windows Spack Installer Bundle
# path: ${{ env.spack_installer }}
# - name: Execute Bundled Installer
# run: |
# $proc = Start-Process ${{ env.spack_installer }}\spack.exe "/install /quiet" -Passthru
# $handle = $proc.Handle # cache proc.Handle
# $proc.WaitForExit();
# $LASTEXITCODE
# env:
# ProgressPreference: SilentlyContinue
# - uses: actions/download-artifact@v3
# with:
# name: Windows Spack Installer
# path: ${{ env.spack_installer }}
# - name: Execute MSI
# run: |
# $proc = Start-Process ${{ env.spack_installer }}\spack.msi "/quiet" -Passthru
# $handle = $proc.Handle # cache proc.Handle
# $proc.WaitForExit();
# $LASTEXITCODE
make-installer:
runs-on: windows-latest
steps:
- name: Disable Windows Symlinks
run: |
git config --global core.symlinks false
shell:
powershell
- uses: actions/checkout@93ea575cb5d8a053eaa0ac8fa3b40d7e05a33cc8
with:
fetch-depth: 0
- uses: actions/setup-python@13ae5bb136fac2878aff31522b9efb785519f984
with:
python-version: 3.9
- name: Install Python packages
run: |
python -m pip install --upgrade pip six pywin32 setuptools
- name: Add Light and Candle to Path
run: |
$env:WIX >> $GITHUB_PATH
- name: Run Installer
run: |
.\spack\share\spack\qa\setup_spack.ps1
spack make-installer -s spack -g SILENT pkg
echo "installer_root=$((pwd).Path)" | Out-File -FilePath $Env:GITHUB_ENV -Encoding utf8 -Append
env:
ProgressPreference: SilentlyContinue
- uses: actions/upload-artifact@3cea5372237819ed00197afe530f5a7ea3e805c8
with:
name: Windows Spack Installer Bundle
path: ${{ env.installer_root }}\pkg\Spack.exe
- uses: actions/upload-artifact@3cea5372237819ed00197afe530f5a7ea3e805c8
with:
name: Windows Spack Installer
path: ${{ env.installer_root}}\pkg\Spack.msi
execute-installer:
needs: make-installer
runs-on: windows-latest
defaults:
run:
shell: pwsh
steps:
- uses: actions/setup-python@13ae5bb136fac2878aff31522b9efb785519f984
with:
python-version: 3.9
- name: Install Python packages
run: |
python -m pip install --upgrade pip six pywin32 setuptools
- name: Setup installer directory
run: |
mkdir -p spack_installer
echo "spack_installer=$((pwd).Path)\spack_installer" | Out-File -FilePath $Env:GITHUB_ENV -Encoding utf8 -Append
- uses: actions/download-artifact@v3
with:
name: Windows Spack Installer Bundle
path: ${{ env.spack_installer }}
- name: Execute Bundled Installer
run: |
$proc = Start-Process ${{ env.spack_installer }}\spack.exe "/install /quiet" -Passthru
$handle = $proc.Handle # cache proc.Handle
$proc.WaitForExit();
$LASTEXITCODE
env:
ProgressPreference: SilentlyContinue
- uses: actions/download-artifact@v3
with:
name: Windows Spack Installer
path: ${{ env.spack_installer }}
- name: Execute MSI
run: |
$proc = Start-Process ${{ env.spack_installer }}\spack.msi "/quiet" -Passthru
$handle = $proc.Handle # cache proc.Handle
$proc.WaitForExit();
$LASTEXITCODE

View File

@@ -1,284 +1,16 @@
# v0.19.0 (2022-11-11)
`v0.19.0` is a major feature release.
## Major features in this release
1. **Package requirements**
Spack's traditional [package preferences](
https://spack.readthedocs.io/en/latest/build_settings.html#package-preferences)
are soft, but we've added hard requriements to `packages.yaml` and `spack.yaml`
(#32528, #32369). Package requirements use the same syntax as specs:
```yaml
packages:
libfabric:
require: "@1.13.2"
mpich:
require:
- one_of: ["+cuda", "+rocm"]
```
More details in [the docs](
https://spack.readthedocs.io/en/latest/build_settings.html#package-requirements).
2. **Environment UI Improvements**
* Fewer surprising modifications to `spack.yaml` (#33711):
* `spack install` in an environment will no longer add to the `specs:` list; you'll
need to either use `spack add <spec>` or `spack install --add <spec>`.
* Similarly, `spack uninstall` will not remove from your environment's `specs:`
list; you'll need to use `spack remove` or `spack uninstall --remove`.
This will make it easier to manage an environment, as there is clear separation
between the stack to be installed (`spack.yaml`/`spack.lock`) and which parts of
it should be installed (`spack install` / `spack uninstall`).
* `concretizer:unify:true` is now the default mode for new environments (#31787)
We see more users creating `unify:true` environments now. Users who need
`unify:false` can add it to their environment to get the old behavior. This will
concretize every spec in the environment independently.
* Include environment configuration from URLs (#29026, [docs](
https://spack.readthedocs.io/en/latest/environments.html#included-configurations))
You can now include configuration in your environment directly from a URL:
```yaml
spack:
include:
- https://github.com/path/to/raw/config/compilers.yaml
```
4. **Multiple Build Systems**
An increasing number of packages in the ecosystem need the ability to support
multiple build systems (#30738, [docs](
https://spack.readthedocs.io/en/latest/packaging_guide.html#multiple-build-systems)),
either across versions, across platforms, or within the same version of the software.
This has been hard to support through multiple inheritance, as methods from different
build system superclasses would conflict. `package.py` files can now define separate
builder classes with installation logic for different build systems, e.g.:
```python
class ArpackNg(CMakePackage, AutotoolsPackage):
build_system(
conditional("cmake", when="@0.64:"),
conditional("autotools", when="@:0.63"),
default="cmake",
)
class CMakeBuilder(spack.build_systems.cmake.CMakeBuilder):
def cmake_args(self):
pass
class Autotoolsbuilder(spack.build_systems.autotools.AutotoolsBuilder):
def configure_args(self):
pass
```
5. **Compiler and variant propagation**
Currently, compiler flags and variants are inconsistent: compiler flags set for a
package are inherited by its dependencies, while variants are not. We should have
these be consistent by allowing for inheritance to be enabled or disabled for both
variants and compiler flags.
Example syntax:
- `package ++variant`:
enabled variant that will be propagated to dependencies
- `package +variant`:
enabled variant that will NOT be propagated to dependencies
- `package ~~variant`:
disabled variant that will be propagated to dependencies
- `package ~variant`:
disabled variant that will NOT be propagated to dependencies
- `package cflags==-g`:
`cflags` will be propagated to dependencies
- `package cflags=-g`:
`cflags` will NOT be propagated to dependencies
Syntax for non-boolan variants is similar to compiler flags. More in the docs for
[variants](
https://spack.readthedocs.io/en/latest/basic_usage.html#variants) and [compiler flags](
https://spack.readthedocs.io/en/latest/basic_usage.html#compiler-flags).
6. **Enhancements to git version specifiers**
* `v0.18.0` added the ability to use git commits as versions. You can now use the
`git.` prefix to specify git tags or branches as versions. All of these are valid git
versions in `v0.19` (#31200):
```console
foo@abcdef1234abcdef1234abcdef1234abcdef1234 # raw commit
foo@git.abcdef1234abcdef1234abcdef1234abcdef1234 # commit with git prefix
foo@git.develop # the develop branch
foo@git.0.19 # use the 0.19 tag
```
* `v0.19` also gives you more control over how Spack interprets git versions, in case
Spack cannot detect the version from the git repository. You can suffix a git
version with `=<version>` to force Spack to concretize it as a particular version
(#30998, #31914, #32257):
```console
# use mybranch, but treat it as version 3.2 for version comparison
foo@git.mybranch=3.2
# use the given commit, but treat it as develop for version comparison
foo@git.abcdef1234abcdef1234abcdef1234abcdef1234=develop
```
More in [the docs](
https://spack.readthedocs.io/en/latest/basic_usage.html#version-specifier)
7. **Changes to Cray EX Support**
Cray machines have historically had their own "platform" within Spack, because we
needed to go through the module system to leverage compilers and MPI installations on
these machines. The Cray EX programming environment now provides standalone `craycc`
executables and proper `mpicc` wrappers, so Spack can treat EX machines like Linux
with extra packages (#29392).
We expect this to greatly reduce bugs, as external packages and compilers can now be
used by prefix instead of through modules. We will also no longer be subject to
reproducibility issues when modules change from Cray PE release to release and from
site to site. This also simplifies dealing with the underlying Linux OS on cray
systems, as Spack will properly model the machine's OS as either SuSE or RHEL.
8. **Improvements to tests and testing in CI**
* `spack ci generate --tests` will generate a `.gitlab-ci.yml` file that not only does
builds but also runs tests for built packages (#27877). Public GitHub pipelines now
also run tests in CI.
* `spack test run --explicit` will only run tests for packages that are explicitly
installed, instead of all packages.
9. **Experimental binding link model**
You can add a new option to `config.yaml` to make Spack embed absolute paths to
needed shared libraries in ELF executables and shared libraries on Linux (#31948, [docs](
https://spack.readthedocs.io/en/latest/config_yaml.html#shared-linking-bind)):
```yaml
config:
shared_linking:
type: rpath
bind: true
```
This can improve launch time at scale for parallel applications, and it can make
installations less susceptible to environment variables like `LD_LIBRARY_PATH`, even
especially when dealing with external libraries that use `RUNPATH`. You can think of
this as a faster, even higher-precedence version of `RPATH`.
## Other new features of note
* `spack spec` prints dependencies more legibly. Dependencies in the output now appear
at the *earliest* level of indentation possible (#33406)
* You can override `package.py` attributes like `url`, directly in `packages.yaml`
(#33275, [docs](
https://spack.readthedocs.io/en/latest/build_settings.html#assigning-package-attributes))
* There are a number of new architecture-related format strings you can use in Spack
configuration files to specify paths (#29810, [docs](
https://spack.readthedocs.io/en/latest/configuration.html#config-file-variables))
* Spack now supports bootstrapping Clingo on Windows (#33400)
* There is now support for an `RPATH`-like library model on Windows (#31930)
## Performance Improvements
* Major performance improvements for installation from binary caches (#27610, #33628,
#33636, #33608, #33590, #33496)
* Test suite can now be parallelized using `xdist` (used in GitHub Actions) (#32361)
* Reduce lock contention for parallel builds in environments (#31643)
## New binary caches and stacks
* We now build nearly all of E4S with `oneapi` in our buildcache (#31781, #31804,
#31804, #31803, #31840, #31991, #32117, #32107, #32239)
* Added 3 new machine learning-centric stacks to binary cache: `x86_64_v3`, CUDA, ROCm
(#31592, #33463)
## Removals and Deprecations
* Support for Python 3.5 is dropped (#31908). Only Python 2.7 and 3.6+ are officially
supported.
* This is the last Spack release that will support Python 2 (#32615). Spack `v0.19`
will emit a deprecation warning if you run it with Python 2, and Python 2 support will
soon be removed from the `develop` branch.
* `LD_LIBRARY_PATH` is no longer set by default by `spack load` or module loads.
Setting `LD_LIBRARY_PATH` in Spack environments/modules can cause binaries from
outside of Spack to crash, and Spack's own builds use `RPATH` and do not need
`LD_LIBRARY_PATH` set in order to run. If you still want the old behavior, you
can run these commands to configure Spack to set `LD_LIBRARY_PATH`:
```console
spack config add modules:prefix_inspections:lib64:[LD_LIBRARY_PATH]
spack config add modules:prefix_inspections:lib:[LD_LIBRARY_PATH]
```
* The `spack:concretization:[together|separately]` has been removed after being
deprecated in `v0.18`. Use `concretizer:unify:[true|false]`.
* `config:module_roots` is no longer supported after being deprecated in `v0.18`. Use
configuration in module sets instead (#28659, [docs](
https://spack.readthedocs.io/en/latest/module_file_support.html)).
* `spack activate` and `spack deactivate` are no longer supported, having been
deprecated in `v0.18`. Use an environment with a view instead of
activating/deactivating ([docs](
https://spack.readthedocs.io/en/latest/environments.html#configuration-in-spack-yaml)).
* The old YAML format for buildcaches is now deprecated (#33707). If you are using an
old buildcache with YAML metadata you will need to regenerate it with JSON metadata.
* `spack bootstrap trust` and `spack bootstrap untrust` are deprecated in favor of
`spack bootstrap enable` and `spack bootstrap disable` and will be removed in `v0.20`.
(#33600)
* The `graviton2` architecture has been renamed to `neoverse_n1`, and `graviton3`
is now `neoverse_v1`. Buildcaches using the old architecture names will need to be rebuilt.
* The terms `blacklist` and `whitelist` have been replaced with `include` and `exclude`
in all configuration files (#31569). You can use `spack config update` to
automatically fix your configuration files.
## Notable Bugfixes
* Permission setting on installation now handles effective uid properly (#19980)
* `buildable:true` for an MPI implementation now overrides `buildable:false` for `mpi` (#18269)
* Improved error messages when attempting to use an unconfigured compiler (#32084)
* Do not punish explicitly requested compiler mismatches in the solver (#30074)
* `spack stage`: add missing --fresh and --reuse (#31626)
* Fixes for adding build system executables like `cmake` to package scope (#31739)
* Bugfix for binary relocation with aliased strings produced by newer `binutils` (#32253)
## Spack community stats
* 6,751 total packages, 335 new since `v0.18.0`
* 141 new Python packages
* 89 new R packages
* 303 people contributed to this release
* 287 committers to packages
* 57 committers to core
# v0.18.1 (2022-07-19)
### Spack Bugfixes
* Fix several bugs related to bootstrapping (#30834,#31042,#31180)
* Fix a regression that was causing spec hashes to differ between
* Fix a regression that was causing spec hashes to differ between
Python 2 and Python 3 (#31092)
* Fixed compiler flags for oneAPI and DPC++ (#30856)
* Fixed several issues related to concretization (#31142,#31153,#31170,#31226)
* Improved support for Cray manifest file and `spack external find` (#31144,#31201,#31173,#31186)
* Assign a version to openSUSE Tumbleweed according to the GLIBC version
in the system (#19895)
in the system (#19895)
* Improved Dockerfile generation for `spack containerize` (#29741,#31321)
* Fixed a few bugs related to concurrent execution of commands (#31509,#31493,#31477)
* Fixed a few bugs related to concurrent execution of commands (#31509,#31493,#31477)
### Package updates
* WarpX: add v22.06, fixed libs property (#30866,#31102)

View File

@@ -1,6 +1,6 @@
MIT License
Copyright (c) 2013-2023 LLNS, LLC and other Spack Project Developers.
Copyright (c) 2013-2022 LLNS, LLC and other Spack Project Developers.
Permission is hereby granted, free of charge, to any person obtaining a copy
of this software and associated documentation files (the "Software"), to deal

View File

@@ -10,8 +10,8 @@ For more on Spack's release structure, see
| Version | Supported |
| ------- | ------------------ |
| develop | :white_check_mark: |
| 0.19.x | :white_check_mark: |
| 0.18.x | :white_check_mark: |
| 0.17.x | :white_check_mark: |
| 0.16.x | :white_check_mark: |
## Reporting a Vulnerability

View File

@@ -1,4 +1,4 @@
# Copyright 2013-2023 Lawrence Livermore National Security, LLC and other
# Copyright 2013-2021 Lawrence Livermore National Security, LLC and other
# Spack Project Developers. See the top-level COPYRIGHT file for details.
#
# SPDX-License-Identifier: (Apache-2.0 OR MIT)
@@ -10,7 +10,6 @@ def getpywin():
try:
import win32con # noqa: F401
except ImportError:
print("pyWin32 not installed but is required...\nInstalling via pip:")
subprocess.check_call([sys.executable, "-m", "pip", "-q", "install", "--upgrade", "pip"])
subprocess.check_call([sys.executable, "-m", "pip", "-q", "install", "pywin32"])

View File

@@ -1,6 +1,6 @@
#!/bin/sh
#
# Copyright 2013-2023 Lawrence Livermore National Security, LLC and other
# Copyright 2013-2021 Lawrence Livermore National Security, LLC and other
# sbang project developers. See the top-level COPYRIGHT file for details.
#
# SPDX-License-Identifier: (Apache-2.0 OR MIT)

View File

@@ -1,7 +1,7 @@
#!/bin/sh
# -*- python -*-
#
# Copyright 2013-2023 Lawrence Livermore National Security, LLC and other
# Copyright 2013-2022 Lawrence Livermore National Security, LLC and other
# Spack Project Developers. See the top-level COPYRIGHT file for details.
#
# SPDX-License-Identifier: (Apache-2.0 OR MIT)
@@ -31,11 +31,13 @@ import os
import os.path
import sys
min_python3 = (3, 6)
min_python3 = (3, 5)
if sys.version_info[:2] < min_python3:
if sys.version_info[:2] < (2, 7) or (
sys.version_info[:2] >= (3, 0) and sys.version_info[:2] < min_python3
):
v_info = sys.version_info[:3]
msg = "Spack requires Python %d.%d or higher " % min_python3
msg = "Spack requires Python 2.7 or %d.%d or higher " % min_python3
msg += "You are running spack with Python %d.%d.%d." % v_info
sys.exit(msg)
@@ -47,8 +49,52 @@ spack_prefix = os.path.dirname(os.path.dirname(spack_file))
spack_lib_path = os.path.join(spack_prefix, "lib", "spack")
sys.path.insert(0, spack_lib_path)
from spack_installable.main import main # noqa: E402
# Add external libs
spack_external_libs = os.path.join(spack_lib_path, "external")
if sys.version_info[:2] <= (2, 7):
sys.path.insert(0, os.path.join(spack_external_libs, "py2"))
sys.path.insert(0, spack_external_libs)
# Here we delete ruamel.yaml in case it has been already imported from site
# (see #9206 for a broader description of the issue).
#
# Briefly: ruamel.yaml produces a .pth file when installed with pip that
# makes the site installed package the preferred one, even though sys.path
# is modified to point to another version of ruamel.yaml.
if "ruamel.yaml" in sys.modules:
del sys.modules["ruamel.yaml"]
if "ruamel" in sys.modules:
del sys.modules["ruamel"]
# The following code is here to avoid failures when updating
# the develop version, due to spurious argparse.pyc files remaining
# in the libs/spack/external directory, see:
# https://github.com/spack/spack/pull/25376
# TODO: Remove in v0.18.0 or later
try:
import argparse
except ImportError:
argparse_pyc = os.path.join(spack_external_libs, "argparse.pyc")
if not os.path.exists(argparse_pyc):
raise
try:
os.remove(argparse_pyc)
import argparse # noqa: F401
except Exception:
msg = (
"The file\n\n\t{0}\n\nis corrupted and cannot be deleted by Spack. "
"Either delete it manually or ask some administrator to "
"delete it for you."
)
print(msg.format(argparse_pyc))
sys.exit(1)
import spack.main # noqa: E402
# Once we've set up the system path, run the spack main method
if __name__ == "__main__":
sys.exit(main())
sys.exit(spack.main.main())

View File

@@ -1,6 +1,6 @@
#!/bin/sh
#
# Copyright 2013-2023 Lawrence Livermore National Security, LLC and other
# Copyright 2013-2022 Lawrence Livermore National Security, LLC and other
# Spack Project Developers. See the top-level COPYRIGHT file for details.
#
# SPDX-License-Identifier: (Apache-2.0 OR MIT)

View File

@@ -1,4 +1,4 @@
:: Copyright 2013-2023 Lawrence Livermore National Security, LLC and other
:: Copyright 2013-2021 Lawrence Livermore National Security, LLC and other
:: Spack Project Developers. See the top-level COPYRIGHT file for details.
::
:: SPDX-License-Identifier: (Apache-2.0 OR MIT)
@@ -83,16 +83,6 @@ if defined _sp_flags (
exit /B 0
)
)
if not defined _sp_subcommand (
if not defined _sp_args (
if not defined _sp_flags (
python "%spack%" --help
exit /B 0
)
)
)
:: pass parsed variables outside of local scope. Need to do
:: this because delayedexpansion can only be set by setlocal
echo %_sp_flags%>flags
@@ -102,24 +92,24 @@ endlocal
set /p _sp_subcommand=<subcmd
set /p _sp_flags=<flags
set /p _sp_args=<args
if "%_sp_subcommand%"=="ECHO is off." (set "_sp_subcommand=")
if "%_sp_subcommand%"=="ECHO is on." (set "_sp_subcommand=")
if "%_sp_flags%"=="ECHO is off." (set "_sp_flags=")
if "%_sp_flags%"=="ECHO is on." (set "_sp_flags=")
if "%_sp_args%"=="ECHO is off." (set "_sp_args=")
if "%_sp_args%"=="ECHO is on." (set "_sp_args=")
set str_subcommand=%_sp_subcommand:"='%
set str_flags=%_sp_flags:"='%
set str_args=%_sp_args:"='%
if "%str_subcommand%"=="ECHO is off." (set "_sp_subcommand=")
if "%str_flags%"=="ECHO is off." (set "_sp_flags=")
if "%str_args%"=="ECHO is off." (set "_sp_args=")
del subcmd
del flags
del args
:: Filter out some commands. For any others, just run the command.
if %_sp_subcommand% == "cd" (
if "%_sp_subcommand%" == "cd" (
goto :case_cd
) else if %_sp_subcommand% == "env" (
) else if "%_sp_subcommand%" == "env" (
goto :case_env
) else if %_sp_subcommand% == "load" (
) else if "%_sp_subcommand%" == "load" (
goto :case_load
) else if %_sp_subcommand% == "unload" (
) else if "%_sp_subcommand%" == "unload" (
goto :case_load
) else (
goto :default_case
@@ -153,21 +143,19 @@ goto :end_switch
:: If no args or args contain --bat or -h/--help: just execute.
if NOT defined _sp_args (
goto :default_case
)
set args_no_quote=%_sp_args:"=%
if NOT "%args_no_quote%"=="%args_no_quote:--help=%" (
)else if NOT "%_sp_args%"=="%_sp_args:--help=%" (
goto :default_case
) else if NOT "%args_no_quote%"=="%args_no_quote: -h=%" (
) else if NOT "%_sp_args%"=="%_sp_args: -h=%" (
goto :default_case
) else if NOT "%args_no_quote%"=="%args_no_quote:--bat=%" (
) else if NOT "%_sp_args%"=="%_sp_args:--bat=%" (
goto :default_case
) else if NOT "%args_no_quote%"=="%args_no_quote:deactivate=%" (
) else if NOT "%_sp_args%"=="%_sp_args:deactivate=%" (
for /f "tokens=* USEBACKQ" %%I in (
`call python %spack% %_sp_flags% env deactivate --bat %args_no_quote:deactivate=%`
`call python "%spack%" %_sp_flags% env deactivate --bat %_sp_args:deactivate=%`
) do %%I
) else if NOT "%args_no_quote%"=="%args_no_quote:activate=%" (
) else if NOT "%_sp_args%"=="%_sp_args:activate=%" (
for /f "tokens=* USEBACKQ" %%I in (
`python %spack% %_sp_flags% env activate --bat %args_no_quote:activate=%`
`call python "%spack%" %_sp_flags% env activate --bat %_sp_args:activate=%`
) do %%I
) else (
goto :default_case
@@ -232,4 +220,4 @@ for %%I in (%~2) do (
:pathadd "%~1" "%%I\%%Z"
)
)
exit /B %ERRORLEVEL%
exit /B %ERRORLEVEL%

View File

@@ -52,6 +52,7 @@ if defined py_path (
if defined py_exe (
"%py_exe%" "%SPACK_ROOT%\bin\haspywin.py"
"%py_exe%" "%SPACK_ROOT%\bin\spack" external find python >NUL
)
set "EDITOR=notepad"

View File

@@ -1,4 +1,4 @@
# Copyright 2013-2023 Lawrence Livermore National Security, LLC and other
# Copyright 2013-2022 Lawrence Livermore National Security, LLC and other
# Spack Project Developers. See the top-level COPYRIGHT file for details.
#
# SPDX-License-Identifier: (Apache-2.0 OR MIT)

View File

@@ -33,4 +33,4 @@ concretizer:
# environments can always be activated. When "false" perform concretization separately
# on each root spec, allowing different versions and variants of the same package in
# an environment.
unify: true
unify: false

View File

@@ -19,7 +19,7 @@ config:
install_tree:
root: $spack/opt/spack
projections:
all: "{architecture}/{compiler.name}-{compiler.version}/{name}-{version}-{hash}"
all: "${ARCHITECTURE}/${COMPILERNAME}-${COMPILERVER}/${PACKAGE}-${VERSION}-${HASH}"
# install_tree can include an optional padded length (int or boolean)
# default is False (do not pad)
# if padded_length is True, Spack will pad as close to the system max path
@@ -54,11 +54,6 @@ config:
# are that it precludes its use as a system package and its ability to be
# pip installable.
#
# In Spack environment files, chaining onto existing system Spack
# installations, the $env variable can be used to download, cache and build
# into user-writable paths that are relative to the currently active
# environment.
#
# In any case, if the username is not already in the path, Spack will append
# the value of `$user` in an attempt to avoid potential conflicts between
# users in shared temporary spaces.
@@ -219,8 +214,4 @@ config:
# Number of seconds a buildcache's index.json is cached locally before probing
# for updates, within a single Spack invocation. Defaults to 10 minutes.
binary_index_ttl: 600
flags:
# Whether to keep -Werror flags active in package builds.
keep_werror: 'none'
binary_index_ttl: 600

View File

@@ -1,21 +0,0 @@
# -------------------------------------------------------------------------
# This file controls default concretization preferences for Spack.
#
# Settings here are versioned with Spack and are intended to provide
# sensible defaults out of the box. Spack maintainers should edit this
# file to keep it current.
#
# Users can override these settings by editing the following files.
#
# Per-spack-instance settings (overrides defaults):
# $SPACK_ROOT/etc/spack/packages.yaml
#
# Per-user settings (overrides default and site settings):
# ~/.spack/packages.yaml
# -------------------------------------------------------------------------
packages:
all:
compiler:
- msvc
providers:
mpi: [msmpi]

162
lib/spack/docs/analyze.rst Normal file
View File

@@ -0,0 +1,162 @@
.. Copyright 2013-2022 Lawrence Livermore National Security, LLC and other
Spack Project Developers. See the top-level COPYRIGHT file for details.
SPDX-License-Identifier: (Apache-2.0 OR MIT)
.. _analyze:
=======
Analyze
=======
The analyze command is a front-end to various tools that let us analyze
package installations. Each analyzer is a module for a different kind
of analysis that can be done on a package installation, including (but not
limited to) binary, log, or text analysis. Thus, the analyze command group
allows you to take an existing package install, choose an analyzer,
and extract some output for the package using it.
-----------------
Analyzer Metadata
-----------------
For all analyzers, we write to an ``analyzers`` folder in ``~/.spack``, or the
value that you specify in your spack config at ``config:analyzers_dir``.
For example, here we see the results of running an analysis on zlib:
.. code-block:: console
$ tree ~/.spack/analyzers/
└── linux-ubuntu20.04-skylake
└── gcc-9.3.0
└── zlib-1.2.11-sl7m27mzkbejtkrajigj3a3m37ygv4u2
├── environment_variables
│   └── spack-analyzer-environment-variables.json
├── install_files
│   └── spack-analyzer-install-files.json
└── libabigail
└── spack-analyzer-libabigail-libz.so.1.2.11.xml
This means that you can always find analyzer output in this folder, and it
is organized with the same logic as the package install it was run for.
If you want to customize this top level folder, simply provide the ``--path``
argument to ``spack analyze run``. The nested organization will be maintained
within your custom root.
-----------------
Listing Analyzers
-----------------
If you aren't familiar with Spack's analyzers, you can quickly list those that
are available:
.. code-block:: console
$ spack analyze list-analyzers
install_files : install file listing read from install_manifest.json
environment_variables : environment variables parsed from spack-build-env.txt
config_args : config args loaded from spack-configure-args.txt
libabigail : Application Binary Interface (ABI) features for objects
In the above, the first three are fairly simple - parsing metadata files from
a package install directory to save
-------------------
Analyzing a Package
-------------------
The analyze command, akin to install, will accept a package spec to perform
an analysis for. The package must be installed. Let's walk through an example
with zlib. We first ask to analyze it. However, since we have more than one
install, we are asked to disambiguate:
.. code-block:: console
$ spack analyze run zlib
==> Error: zlib matches multiple packages.
Matching packages:
fz2bs56 zlib@1.2.11%gcc@7.5.0 arch=linux-ubuntu18.04-skylake
sl7m27m zlib@1.2.11%gcc@9.3.0 arch=linux-ubuntu20.04-skylake
Use a more specific spec.
We can then specify the spec version that we want to analyze:
.. code-block:: console
$ spack analyze run zlib/fz2bs56
If you don't provide any specific analyzer names, by default all analyzers
(shown in the ``list-analyzers`` subcommand list) will be run. If an analyzer does not
have any result, it will be skipped. For example, here is a result running for
zlib:
.. code-block:: console
$ ls ~/.spack/analyzers/linux-ubuntu20.04-skylake/gcc-9.3.0/zlib-1.2.11-sl7m27mzkbejtkrajigj3a3m37ygv4u2/
spack-analyzer-environment-variables.json
spack-analyzer-install-files.json
spack-analyzer-libabigail-libz.so.1.2.11.xml
If you want to run a specific analyzer, ask for it with `--analyzer`. Here we run
spack analyze on libabigail (already installed) _using_ libabigail1
.. code-block:: console
$ spack analyze run --analyzer abigail libabigail
.. _analyze_monitoring:
----------------------
Monitoring An Analysis
----------------------
For any kind of analysis, you can
use a `spack monitor <https://github.com/spack/spack-monitor>`_ "Spackmon"
as a server to upload the same run metadata to. You can
follow the instructions in the `spack monitor documentation <https://spack-monitor.readthedocs.org>`_
to first create a server along with a username and token for yourself.
You can then use this guide to interact with the server.
You should first export our spack monitor token and username to the environment:
.. code-block:: console
$ export SPACKMON_TOKEN=50445263afd8f67e59bd79bff597836ee6c05438
$ export SPACKMON_USER=spacky
By default, the host for your server is expected to be at ``http://127.0.0.1``
with a prefix of ``ms1``, and if this is the case, you can simply add the
``--monitor`` flag to the install command:
.. code-block:: console
$ spack analyze run --monitor wget
If you need to customize the host or the prefix, you can do that as well:
.. code-block:: console
$ spack analyze run --monitor --monitor-prefix monitor --monitor-host https://monitor-service.io wget
If your server doesn't have authentication, you can skip it:
.. code-block:: console
$ spack analyze run --monitor --monitor-disable-auth wget
Regardless of your choice, when you run analyze on an installed package (whether
it was installed with ``--monitor`` or not, you'll see the results generating as they did
before, and a message that the monitor server was pinged:
.. code-block:: console
$ spack analyze --monitor wget
...
==> Sending result for wget bin/wget to monitor.

View File

@@ -1,4 +1,4 @@
.. Copyright 2013-2023 Lawrence Livermore National Security, LLC and other
.. Copyright 2013-2022 Lawrence Livermore National Security, LLC and other
Spack Project Developers. See the top-level COPYRIGHT file for details.
SPDX-License-Identifier: (Apache-2.0 OR MIT)
@@ -1114,21 +1114,21 @@ set of arbitrary versions, such as ``@1.0,1.5,1.7`` (``1.0``, ``1.5``,
or ``1.7``). When you supply such a specifier to ``spack install``,
it constrains the set of versions that Spack will install.
For packages with a ``git`` attribute, ``git`` references
may be specified instead of a numerical version i.e. branches, tags
and commits. Spack will stage and build based off the ``git``
For packages with a ``git`` attribute, ``git`` references
may be specified instead of a numerical version i.e. branches, tags
and commits. Spack will stage and build based off the ``git``
reference provided. Acceptable syntaxes for this are:
.. code-block:: sh
# branches and tags
foo@git.develop # use the develop branch
foo@git.0.19 # use the 0.19 tag
# commit hashes
foo@abcdef1234abcdef1234abcdef1234abcdef1234 # 40 character hashes are automatically treated as git commits
foo@git.abcdef1234abcdef1234abcdef1234abcdef1234
Spack versions from git reference either have an associated version supplied by the user,
or infer a relationship to known versions from the structure of the git repository. If an
associated version is supplied by the user, Spack treats the git version as equivalent to that
@@ -1244,8 +1244,8 @@ For example, for the ``stackstart`` variant:
.. code-block:: sh
mpileaks stackstart==4 # variant will be propagated to dependencies
mpileaks stackstart=4 # only mpileaks will have this variant value
mpileaks stackstart=4 # variant will be propagated to dependencies
mpileaks stackstart==4 # only mpileaks will have this variant value
^^^^^^^^^^^^^^
Compiler Flags
@@ -1672,13 +1672,9 @@ own install prefix. However, certain packages are typically installed
`Python <https://www.python.org>`_ packages are typically installed in the
``$prefix/lib/python-2.7/site-packages`` directory.
In Spack, installation prefixes are immutable, so this type of installation
is not directly supported. However, it is possible to create views that
allow you to merge install prefixes of multiple packages into a single new prefix.
Views are a convenient way to get a more traditional filesystem structure.
Using *extensions*, you can ensure that Python packages always share the
same prefix in the view as Python itself. Suppose you have
Python installed like so:
Spack has support for this type of installation as well. In Spack,
a package that can live inside the prefix of another package is called
an *extension*. Suppose you have Python installed like so:
.. code-block:: console
@@ -1716,6 +1712,8 @@ You can find extensions for your Python installation like this:
py-ipython@2.3.1 py-pygments@2.0.1 py-setuptools@11.3.1
py-matplotlib@1.4.2 py-pyparsing@2.0.3 py-six@1.9.0
==> None activated.
The extensions are a subset of what's returned by ``spack list``, and
they are packages like any other. They are installed into their own
prefixes, and you can see this with ``spack find --paths``:
@@ -1743,72 +1741,32 @@ directly when you run ``python``:
ImportError: No module named numpy
>>>
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
Using Extensions in Environments
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
^^^^^^^^^^^^^^^^
Using Extensions
^^^^^^^^^^^^^^^^
The recommended way of working with extensions such as ``py-numpy``
above is through :ref:`Environments <environments>`. For example,
the following creates an environment in the current working directory
with a filesystem view in the ``./view`` directory:
.. code-block:: console
$ spack env create --with-view view --dir .
$ spack -e . add py-numpy
$ spack -e . concretize
$ spack -e . install
We recommend environments for two reasons. Firstly, environments
can be activated (requires :ref:`shell-support`):
.. code-block:: console
$ spack env activate .
which sets all the right environment variables such as ``PATH`` and
``PYTHONPATH``. This ensures that
.. code-block:: console
$ python
>>> import numpy
works. Secondly, even without shell support, the view ensures
that Python can locate its extensions:
.. code-block:: console
$ ./view/bin/python
>>> import numpy
See :ref:`environments` for a more in-depth description of Spack
environments and customizations to views.
^^^^^^^^^^^^^^^^^^^^
Using ``spack load``
^^^^^^^^^^^^^^^^^^^^
A more traditional way of using Spack and extensions is ``spack load``
(requires :ref:`shell-support`). This will add the extension to ``PYTHONPATH``
in your current shell, and Python itself will be available in the ``PATH``:
There are four ways to get ``numpy`` working in Python. The first is
to use :ref:`shell-support`. You can simply ``load`` the extension,
and it will be added to the ``PYTHONPATH`` in your current shell:
.. code-block:: console
$ spack load python
$ spack load py-numpy
$ python
>>> import numpy
Now ``import numpy`` will succeed for as long as you keep your current
session open.
The loaded packages can be checked using ``spack find --loaded``
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
Loading Extensions via Modules
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
Apart from ``spack env activate`` and ``spack load``, you can load numpy
through your environment modules (using ``environment-modules`` or
``lmod``). This will also add the extension to the ``PYTHONPATH`` in
your current shell.
Instead of using Spack's environment modification capabilities through
the ``spack load`` command, you can load numpy through your
environment modules (using ``environment-modules`` or ``lmod``). This
will also add the extension to the ``PYTHONPATH`` in your current
shell.
.. code-block:: console
@@ -1818,6 +1776,130 @@ If you do not know the name of the specific numpy module you wish to
load, you can use the ``spack module tcl|lmod loads`` command to get
the name of the module from the Spack spec.
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
Activating Extensions in a View
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
Another way to use extensions is to create a view, which merges the
python installation along with the extensions into a single prefix.
See :ref:`configuring_environment_views` for a more in-depth description
of views.
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
Activating Extensions Globally
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
As an alternative to creating a merged prefix with Python and its extensions,
and prior to support for views, Spack has provided a means to install the
extension into the Spack installation prefix for the extendee. This has
typically been useful since extendable packages typically search their own
installation path for addons by default.
Global activations are performed with the ``spack activate`` command:
.. _cmd-spack-activate:
^^^^^^^^^^^^^^^^^^
``spack activate``
^^^^^^^^^^^^^^^^^^
.. code-block:: console
$ spack activate py-numpy
==> Activated extension py-setuptools@11.3.1%gcc@4.4.7 arch=linux-debian7-x86_64-3c74eb69 for python@2.7.8%gcc@4.4.7.
==> Activated extension py-nose@1.3.4%gcc@4.4.7 arch=linux-debian7-x86_64-5f70f816 for python@2.7.8%gcc@4.4.7.
==> Activated extension py-numpy@1.9.1%gcc@4.4.7 arch=linux-debian7-x86_64-66733244 for python@2.7.8%gcc@4.4.7.
Several things have happened here. The user requested that
``py-numpy`` be activated in the ``python`` installation it was built
with. Spack knows that ``py-numpy`` depends on ``py-nose`` and
``py-setuptools``, so it activated those packages first. Finally,
once all dependencies were activated in the ``python`` installation,
``py-numpy`` was activated as well.
If we run ``spack extensions`` again, we now see the three new
packages listed as activated:
.. code-block:: console
$ spack extensions python
==> python@2.7.8%gcc@4.4.7 arch=linux-debian7-x86_64-703c7a96
==> 36 extensions:
geos py-ipython py-pexpect py-pyside py-sip
py-basemap py-libxml2 py-pil py-pytz py-six
py-biopython py-mako py-pmw py-rpy2 py-sympy
py-cython py-matplotlib py-pychecker py-scientificpython py-virtualenv
py-dateutil py-mpi4py py-pygments py-scikit-learn
py-epydoc py-mx py-pylint py-scipy
py-gnuplot py-nose py-pyparsing py-setuptools
py-h5py py-numpy py-pyqt py-shiboken
==> 12 installed:
-- linux-debian7-x86_64 / gcc@4.4.7 --------------------------------
py-dateutil@2.4.0 py-nose@1.3.4 py-pyside@1.2.2
py-dateutil@2.4.0 py-numpy@1.9.1 py-pytz@2014.10
py-ipython@2.3.1 py-pygments@2.0.1 py-setuptools@11.3.1
py-matplotlib@1.4.2 py-pyparsing@2.0.3 py-six@1.9.0
==> 3 currently activated:
-- linux-debian7-x86_64 / gcc@4.4.7 --------------------------------
py-nose@1.3.4 py-numpy@1.9.1 py-setuptools@11.3.1
Now, when a user runs python, ``numpy`` will be available for import
*without* the user having to explicitly load it. ``python@2.7.8`` now
acts like a system Python installation with ``numpy`` installed inside
of it.
Spack accomplishes this by symbolically linking the *entire* prefix of
the ``py-numpy`` package into the prefix of the ``python`` package. To the
python interpreter, it looks like ``numpy`` is installed in the
``site-packages`` directory.
The only limitation of global activation is that you can only have a *single*
version of an extension activated at a time. This is because multiple
versions of the same extension would conflict if symbolically linked
into the same prefix. Users who want a different version of a package
can still get it by using environment modules or views, but they will have to
explicitly load their preferred version.
^^^^^^^^^^^^^^^^^^^^^^^^^^
``spack activate --force``
^^^^^^^^^^^^^^^^^^^^^^^^^^
If, for some reason, you want to activate a package *without* its
dependencies, you can use ``spack activate --force``:
.. code-block:: console
$ spack activate --force py-numpy
==> Activated extension py-numpy@1.9.1%gcc@4.4.7 arch=linux-debian7-x86_64-66733244 for python@2.7.8%gcc@4.4.7.
.. _cmd-spack-deactivate:
^^^^^^^^^^^^^^^^^^^^
``spack deactivate``
^^^^^^^^^^^^^^^^^^^^
We've seen how activating an extension can be used to set up a default
version of a Python module. Obviously, you may want to change that at
some point. ``spack deactivate`` is the command for this. There are
several variants:
* ``spack deactivate <extension>`` will deactivate a single
extension. If another activated extension depends on this one,
Spack will warn you and exit with an error.
* ``spack deactivate --force <extension>`` deactivates an extension
regardless of packages that depend on it.
* ``spack deactivate --all <extension>`` deactivates an extension and
all of its dependencies. Use ``--force`` to disregard dependents.
* ``spack deactivate --all <extendee>`` deactivates *all* activated
extensions of a package. For example, to deactivate *all* python
extensions, use:
.. code-block:: console
$ spack deactivate --all python
-----------------------
Filesystem requirements
-----------------------

View File

@@ -1,4 +1,4 @@
.. Copyright 2013-2023 Lawrence Livermore National Security, LLC and other
.. Copyright 2013-2022 Lawrence Livermore National Security, LLC and other
Spack Project Developers. See the top-level COPYRIGHT file for details.
SPDX-License-Identifier: (Apache-2.0 OR MIT)
@@ -13,51 +13,49 @@ Some sites may encourage users to set up their own test environments
before carrying out central installations, or some users may prefer to set
up these environments on their own motivation. To reduce the load of
recompiling otherwise identical package specs in different installations,
installed packages can be put into build cache tarballs, pushed to
installed packages can be put into build cache tarballs, uploaded to
your Spack mirror and then downloaded and installed by others.
Whenever a mirror provides prebuilt packages, Spack will take these packages
into account during concretization and installation, making ``spack install``
signficantly faster.
--------------------------
Creating build cache files
--------------------------
.. note::
We use the terms "build cache" and "mirror" often interchangeably. Mirrors
are used during installation both for sources and prebuilt packages. Build
caches refer to mirrors that provide prebuilt packages.
----------------------
Creating a build cache
----------------------
A compressed tarball of an installed package is created. Tarballs are created
for all of its link and run dependency packages as well. Compressed tarballs are
signed with gpg and signature and tarball and put in a ``.spack`` file. Optionally,
the rpaths (and ids and deps on macOS) can be changed to paths relative to
the Spack install tree before the tarball is created.
Build caches are created via:
.. code-block:: console
$ spack buildcache create <path/url/mirror name> <spec>
$ spack buildcache create <spec>
This command takes the locally installed spec and its dependencies, and
creates tarballs of their install prefixes. It also generates metadata files,
signed with GPG. These tarballs and metadata files are then pushed to the
provided binary cache, which can be a local directory or a remote URL.
Here is an example where a build cache is created in a local directory named
"spack-cache", to which we push the "ninja" spec:
If you wanted to create a build cache in a local directory, you would provide
the ``-d`` argument to target that directory, again also specifying the spec.
Here is an example creating a local directory, "spack-cache" and creating
build cache files for the "ninja" spec:
.. code-block:: console
$ spack buildcache create --allow-root ./spack-cache ninja
==> Pushing binary packages to file:///home/spackuser/spack/spack-cache/build_cache
$ mkdir -p ./spack-cache
$ spack buildcache create -d ./spack-cache ninja
==> Buildcache files will be output to file:///home/spackuser/spack/spack-cache/build_cache
gpgconf: socketdir is '/run/user/1000/gnupg'
gpg: using "E6DF6A8BD43208E4D6F392F23777740B7DBD643D" as default secret key for signing
Not that ``ninja`` must be installed locally for this to work.
Note that the targeted spec must already be installed. Once you have a build cache,
you can add it as a mirror, discussed next.
We're using the ``--allow-root`` flag to tell Spack that is OK when any of
the binaries we're pushing contain references to the local Spack install
directory.
.. warning::
Once you have a build cache, you can add it as a mirror, discussed next.
Spack improved the format used for binary caches in v0.18. The entire v0.18 series
will be able to verify and install binary caches both in the new and in the old format.
Support for using the old format is expected to end in v0.19, so we advise users to
recreate relevant buildcaches using Spack v0.18 or higher.
---------------------------------------
Finding or installing build cache files
@@ -68,10 +66,10 @@ with:
.. code-block:: console
$ spack mirror add <name> <url or path>
$ spack mirror add <name> <url>
Both web URLs and local paths on the filesystem can be specified. In the previous
Note that the url can be a web url _or_ a local filesystem location. In the previous
example, you might add the directory "spack-cache" and call it ``mymirror``:
@@ -96,7 +94,7 @@ this new build cache as follows:
.. code-block:: console
$ spack buildcache update-index ./spack-cache
$ spack buildcache update-index -d spack-cache/
Now you can use list:
@@ -107,38 +105,46 @@ Now you can use list:
-- linux-ubuntu20.04-skylake / gcc@9.3.0 ------------------------
ninja@1.10.2
With ``mymirror`` configured and an index available, Spack will automatically
use it during concretization and installation. That means that you can expect
``spack install ninja`` to fetch prebuilt packages from the mirror. Let's
verify by re-installing ninja:
Great! So now let's say you have a different spack installation, or perhaps just
a different environment for the same one, and you want to install a package from
that build cache. Let's first uninstall the actual library "ninja" to see if we can
re-install it from the cache.
.. code-block:: console
$ spack uninstall ninja
$ spack install ninja
==> Installing ninja-1.11.1-yxferyhmrjkosgta5ei6b4lqf6bxbscz
==> Fetching file:///home/spackuser/spack/spack-cache/build_cache/linux-ubuntu20.04-skylake-gcc-9.3.0-ninja-1.10.2-yxferyhmrjkosgta5ei6b4lqf6bxbscz.spec.json.sig
gpg: Signature made Do 12 Jan 2023 16:01:04 CET
gpg: using RSA key 61B82B2B2350E171BD17A1744E3A689061D57BF6
gpg: Good signature from "example (GPG created for Spack) <example@example.com>" [ultimate]
==> Fetching file:///home/spackuser/spack/spack-cache/build_cache/linux-ubuntu20.04-skylake/gcc-9.3.0/ninja-1.10.2/linux-ubuntu20.04-skylake-gcc-9.3.0-ninja-1.10.2-yxferyhmrjkosgta5ei6b4lqf6bxbscz.spack
==> Extracting ninja-1.10.2-yxferyhmrjkosgta5ei6b4lqf6bxbscz from binary cache
==> ninja: Successfully installed ninja-1.11.1-yxferyhmrjkosgta5ei6b4lqf6bxbscz
Search: 0.00s. Fetch: 0.17s. Install: 0.12s. Total: 0.29s
[+] /home/harmen/spack/opt/spack/linux-ubuntu20.04-skylake/gcc-9.3.0/ninja-1.11.1-yxferyhmrjkosgta5ei6b4lqf6bxbscz
It worked! You've just completed a full example of creating a build cache with
a spec of interest, adding it as a mirror, updating its index, listing the contents,
and finally, installing from it.
By default Spack falls back to building from sources when the mirror is not available
or when the package is simply not already available. To force Spack to only install
prebuilt packages, you can use
And now reinstall from the buildcache
.. code-block:: console
$ spack install --use-buildcache only <package>
$ spack buildcache install ninja
==> buildcache spec(s) matching ninja
==> Fetching file:///home/spackuser/spack/spack-cache/build_cache/linux-ubuntu20.04-skylake/gcc-9.3.0/ninja-1.10.2/linux-ubuntu20.04-skylake-gcc-9.3.0-ninja-1.10.2-i4e5luour7jxdpc3bkiykd4imke3mkym.spack
####################################################################################################################################### 100.0%
==> Installing buildcache for spec ninja@1.10.2%gcc@9.3.0 arch=linux-ubuntu20.04-skylake
gpgconf: socketdir is '/run/user/1000/gnupg'
gpg: Signature made Tue 23 Mar 2021 10:16:29 PM MDT
gpg: using RSA key E6DF6A8BD43208E4D6F392F23777740B7DBD643D
gpg: Good signature from "spackuser (GPG created for Spack) <spackuser@noreply.users.github.com>" [ultimate]
It worked! You've just completed a full example of creating a build cache with
a spec of interest, adding it as a mirror, updating it's index, listing the contents,
and finally, installing from it.
Note that the above command is intended to install a particular package to a
build cache you have created, and not to install a package from a build cache.
For the latter, once a mirror is added, by default when you do ``spack install`` the ``--use-cache``
flag is set, and you will install a package from a build cache if it is available.
If you want to always use the cache, you can do:
.. code-block:: console
$ spack install --cache-only <package>
For example, to combine all of the commands above to add the E4S build cache
and then install from it exclusively, you would do:
@@ -147,7 +153,7 @@ and then install from it exclusively, you would do:
$ spack mirror add E4S https://cache.e4s.io
$ spack buildcache keys --install --trust
$ spack install --use-buildache only <package>
$ spack install --cache-only <package>
We use ``--install`` and ``--trust`` to say that we are installing keys to our
keyring, and trusting all downloaded keys.

View File

@@ -1,4 +1,4 @@
.. Copyright 2013-2023 Lawrence Livermore National Security, LLC and other
.. Copyright 2013-2021 Lawrence Livermore National Security, LLC and other
Spack Project Developers. See the top-level COPYRIGHT file for details.
SPDX-License-Identifier: (Apache-2.0 OR MIT)

View File

@@ -1,4 +1,4 @@
.. Copyright 2013-2023 Lawrence Livermore National Security, LLC and other
.. Copyright 2013-2022 Lawrence Livermore National Security, LLC and other
Spack Project Developers. See the top-level COPYRIGHT file for details.
SPDX-License-Identifier: (Apache-2.0 OR MIT)
@@ -272,7 +272,7 @@ Selection of the target microarchitectures
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
The options under the ``targets`` attribute control which targets are considered during a solve.
Currently the options in this section are only configurable from the ``concretizer.yaml`` file
Currently the options in this section are only configurable from the ``concretization.yaml`` file
and there are no corresponding command line arguments to enable them for a single solve.
The ``granularity`` option can take two possible values: ``microarchitectures`` and ``generic``.
@@ -302,31 +302,88 @@ microarchitectures considered during the solve are constrained to be compatible
host Spack is currently running on. For instance, if this option is set to ``true``, a
user cannot concretize for ``target=icelake`` while running on an Haswell node.
.. _package-preferences:
-------------------
Package Preferences
-------------------
Spack can be configured to prefer certain compilers, package
versions, dependencies, and variants during concretization.
The preferred configuration can be controlled via the
``~/.spack/packages.yaml`` file for user configurations, or the
``etc/spack/packages.yaml`` site configuration.
Here's an example ``packages.yaml`` file that sets preferred packages:
.. code-block:: yaml
packages:
opencv:
compiler: [gcc@4.9]
variants: +debug
gperftools:
version: [2.2, 2.4, 2.3]
all:
compiler: [gcc@4.4.7, 'gcc@4.6:', intel, clang, pgi]
target: [sandybridge]
providers:
mpi: [mvapich2, mpich, openmpi]
At a high level, this example is specifying how packages should be
concretized. The opencv package should prefer using GCC 4.9 and
be built with debug options. The gperftools package should prefer version
2.2 over 2.4. Every package on the system should prefer mvapich2 for
its MPI and GCC 4.4.7 (except for opencv, which overrides this by preferring GCC 4.9).
These options are used to fill in implicit defaults. Any of them can be overwritten
on the command line if explicitly requested.
Each ``packages.yaml`` file begins with the string ``packages:`` and
package names are specified on the next level. The special string ``all``
applies settings to *all* packages. Underneath each package name is one
or more components: ``compiler``, ``variants``, ``version``,
``providers``, and ``target``. Each component has an ordered list of
spec ``constraints``, with earlier entries in the list being preferred
over later entries.
Sometimes a package installation may have constraints that forbid
the first concretization rule, in which case Spack will use the first
legal concretization rule. Going back to the example, if a user
requests gperftools 2.3 or later, then Spack will install version 2.4
as the 2.4 version of gperftools is preferred over 2.3.
An explicit concretization rule in the preferred section will always
take preference over unlisted concretizations. In the above example,
xlc isn't listed in the compiler list. Every listed compiler from
gcc to pgi will thus be preferred over the xlc compiler.
The syntax for the ``provider`` section differs slightly from other
concretization rules. A provider lists a value that packages may
``depend_on`` (e.g, MPI) and a list of rules for fulfilling that
dependency.
.. _package-requirements:
--------------------
Package Requirements
--------------------
Spack can be configured to always use certain compilers, package
versions, and variants during concretization through package
requirements.
You can use the configuration to force the concretizer to choose
specific properties for packages when building them. Like preferences,
these are only applied when the package is required by some other
request (e.g. if the package is needed as a dependency of a
request to ``spack install``).
Package requirements are useful when you find yourself repeatedly
specifying the same constraints on the command line, and wish that
Spack respects these constraints whether you mention them explicitly
or not. Another use case is specifying constraints that should apply
to all root specs in an environment, without having to repeat the
constraint everywhere.
An example of where this is useful is if you have a package that
is normally built as a dependency but only under certain circumstances
(e.g. only when a variant on a dependent is active): you can make
sure that it always builds the way you want it to; this distinguishes
package configuration requirements from constraints that you add to
``spack install`` or to environments (in those cases, the associated
packages are always built).
Apart from that, requirements config is more flexible than constraints
on the command line, because it can specify constraints on packages
*when they occur* as a dependency. In contrast, on the command line it
is not possible to specify constraints on dependencies while also keeping
those dependencies optional.
The package requirements configuration is specified in ``packages.yaml``
keyed by package name:
The following is an example of how to enforce package properties in
``packages.yaml``:
.. code-block:: yaml
@@ -395,15 +452,15 @@ under ``all`` are disregarded. For example, with a configuration like this:
cmake:
require: '%gcc'
Spack requires ``cmake`` to use ``gcc`` and all other nodes (including ``cmake``
dependencies) to use ``clang``.
Spack requires ``cmake`` to use ``gcc`` and all other nodes (including cmake dependencies)
to use ``clang``.
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
Setting requirements on virtual specs
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
A requirement on a virtual spec applies whenever that virtual is present in the DAG.
This can be useful for fixing which virtual provider you want to use:
A requirement on a virtual spec applies whenever that virtual is present in the DAG. This
can be useful for fixing which virtual provider you want to use:
.. code-block:: yaml
@@ -413,8 +470,8 @@ This can be useful for fixing which virtual provider you want to use:
With the configuration above the only allowed ``mpi`` provider is ``mvapich2 %gcc``.
Requirements on the virtual spec and on the specific provider are both applied, if
present. For instance with a configuration like:
Requirements on the virtual spec and on the specific provider are both applied, if present. For
instance with a configuration like:
.. code-block:: yaml
@@ -426,66 +483,6 @@ present. For instance with a configuration like:
you will use ``mvapich2~cuda %gcc`` as an ``mpi`` provider.
.. _package-preferences:
-------------------
Package Preferences
-------------------
In some cases package requirements can be too strong, and package
preferences are the better option. Package preferences do not impose
constraints on packages for particular versions or variants values,
they rather only set defaults -- the concretizer is free to change
them if it must due to other constraints. Also note that package
preferences are of lower priority than reuse of already installed
packages.
Here's an example ``packages.yaml`` file that sets preferred packages:
.. code-block:: yaml
packages:
opencv:
compiler: [gcc@4.9]
variants: +debug
gperftools:
version: [2.2, 2.4, 2.3]
all:
compiler: [gcc@4.4.7, 'gcc@4.6:', intel, clang, pgi]
target: [sandybridge]
providers:
mpi: [mvapich2, mpich, openmpi]
At a high level, this example is specifying how packages are preferably
concretized. The opencv package should prefer using GCC 4.9 and
be built with debug options. The gperftools package should prefer version
2.2 over 2.4. Every package on the system should prefer mvapich2 for
its MPI and GCC 4.4.7 (except for opencv, which overrides this by preferring GCC 4.9).
These options are used to fill in implicit defaults. Any of them can be overwritten
on the command line if explicitly requested.
Package preferences accept the follow keys or components under
the specific package (or ``all``) section: ``compiler``, ``variants``,
``version``, ``providers``, and ``target``. Each component has an
ordered list of spec ``constraints``, with earlier entries in the
list being preferred over later entries.
Sometimes a package installation may have constraints that forbid
the first concretization rule, in which case Spack will use the first
legal concretization rule. Going back to the example, if a user
requests gperftools 2.3 or later, then Spack will install version 2.4
as the 2.4 version of gperftools is preferred over 2.3.
An explicit concretization rule in the preferred section will always
take preference over unlisted concretizations. In the above example,
xlc isn't listed in the compiler list. Every listed compiler from
gcc to pgi will thus be preferred over the xlc compiler.
The syntax for the ``provider`` section differs slightly from other
concretization rules. A provider lists a value that packages may
``depends_on`` (e.g, MPI) and a list of rules for fulfilling that
dependency.
.. _package_permissions:
-------------------

View File

@@ -1,4 +1,4 @@
.. Copyright 2013-2023 Lawrence Livermore National Security, LLC and other
.. Copyright 2013-2022 Lawrence Livermore National Security, LLC and other
Spack Project Developers. See the top-level COPYRIGHT file for details.
SPDX-License-Identifier: (Apache-2.0 OR MIT)

View File

@@ -1,4 +1,4 @@
.. Copyright 2013-2023 Lawrence Livermore National Security, LLC and other
.. Copyright 2013-2022 Lawrence Livermore National Security, LLC and other
Spack Project Developers. See the top-level COPYRIGHT file for details.
SPDX-License-Identifier: (Apache-2.0 OR MIT)

View File

@@ -1,4 +1,4 @@
.. Copyright 2013-2023 Lawrence Livermore National Security, LLC and other
.. Copyright 2013-2022 Lawrence Livermore National Security, LLC and other
Spack Project Developers. See the top-level COPYRIGHT file for details.
SPDX-License-Identifier: (Apache-2.0 OR MIT)

View File

@@ -1,13 +1,13 @@
.. Copyright 2013-2023 Lawrence Livermore National Security, LLC and other
.. Copyright 2013-2021 Lawrence Livermore National Security, LLC and other
Spack Project Developers. See the top-level COPYRIGHT file for details.
SPDX-License-Identifier: (Apache-2.0 OR MIT)
.. _cachedcmakepackage:
-----------
CachedCMake
-----------
------------------
CachedCMakePackage
------------------
The CachedCMakePackage base class is used for CMake-based workflows
that create a CMake cache file prior to running ``cmake``. This is

View File

@@ -1,4 +1,4 @@
.. Copyright 2013-2023 Lawrence Livermore National Security, LLC and other
.. Copyright 2013-2022 Lawrence Livermore National Security, LLC and other
Spack Project Developers. See the top-level COPYRIGHT file for details.
SPDX-License-Identifier: (Apache-2.0 OR MIT)

View File

@@ -1,13 +1,13 @@
.. Copyright 2013-2023 Lawrence Livermore National Security, LLC and other
.. Copyright 2013-2022 Lawrence Livermore National Security, LLC and other
Spack Project Developers. See the top-level COPYRIGHT file for details.
SPDX-License-Identifier: (Apache-2.0 OR MIT)
.. _cudapackage:
----
Cuda
----
-----------
CudaPackage
-----------
Different from other packages, ``CudaPackage`` does not represent a build system.
Instead its goal is to simplify and unify usage of ``CUDA`` in other packages by providing a `mixin-class <https://en.wikipedia.org/wiki/Mixin>`_.
@@ -80,7 +80,7 @@ standard CUDA compiler flags.
**cuda_flags**
This built-in static method returns a list of command line flags
This built-in static method returns a list of command line flags
for the chosen ``cuda_arch`` value(s). The flags are intended to
be passed to the CUDA compiler driver (i.e., ``nvcc``).

View File

@@ -1,4 +1,4 @@
.. Copyright 2013-2023 Lawrence Livermore National Security, LLC and other
.. Copyright 2013-2022 Lawrence Livermore National Security, LLC and other
Spack Project Developers. See the top-level COPYRIGHT file for details.
SPDX-License-Identifier: (Apache-2.0 OR MIT)

View File

@@ -1,4 +1,4 @@
.. Copyright 2013-2023 Lawrence Livermore National Security, LLC and other
.. Copyright 2013-2022 Lawrence Livermore National Security, LLC and other
Spack Project Developers. See the top-level COPYRIGHT file for details.
SPDX-License-Identifier: (Apache-2.0 OR MIT)
@@ -6,9 +6,9 @@
.. _inteloneapipackage:
===========
IntelOneapi
===========
====================
IntelOneapiPackage
====================
.. contents::
@@ -36,7 +36,7 @@ For more information on a specific package, do::
Intel no longer releases new versions of Parallel Studio, which can be
used in Spack via the :ref:`intelpackage`. All of its components can
now be found in oneAPI.
now be found in oneAPI.
Examples
========

View File

@@ -1,13 +1,13 @@
.. Copyright 2013-2023 Lawrence Livermore National Security, LLC and other
.. Copyright 2013-2022 Lawrence Livermore National Security, LLC and other
Spack Project Developers. See the top-level COPYRIGHT file for details.
SPDX-License-Identifier: (Apache-2.0 OR MIT)
.. _intelpackage:
-----
Intel
-----
------------
IntelPackage
------------
.. contents::

View File

@@ -1,4 +1,4 @@
.. Copyright 2013-2023 Lawrence Livermore National Security, LLC and other
.. Copyright 2013-2022 Lawrence Livermore National Security, LLC and other
Spack Project Developers. See the top-level COPYRIGHT file for details.
SPDX-License-Identifier: (Apache-2.0 OR MIT)

View File

@@ -1,4 +1,4 @@
.. Copyright 2013-2023 Lawrence Livermore National Security, LLC and other
.. Copyright 2013-2022 Lawrence Livermore National Security, LLC and other
Spack Project Developers. See the top-level COPYRIGHT file for details.
SPDX-License-Identifier: (Apache-2.0 OR MIT)

View File

@@ -1,4 +1,4 @@
.. Copyright 2013-2023 Lawrence Livermore National Security, LLC and other
.. Copyright 2013-2022 Lawrence Livermore National Security, LLC and other
Spack Project Developers. See the top-level COPYRIGHT file for details.
SPDX-License-Identifier: (Apache-2.0 OR MIT)

View File

@@ -1,4 +1,4 @@
.. Copyright 2013-2023 Lawrence Livermore National Security, LLC and other
.. Copyright 2013-2022 Lawrence Livermore National Security, LLC and other
Spack Project Developers. See the top-level COPYRIGHT file for details.
SPDX-License-Identifier: (Apache-2.0 OR MIT)

View File

@@ -1,4 +1,4 @@
.. Copyright 2013-2023 Lawrence Livermore National Security, LLC and other
.. Copyright 2013-2022 Lawrence Livermore National Security, LLC and other
Spack Project Developers. See the top-level COPYRIGHT file for details.
SPDX-License-Identifier: (Apache-2.0 OR MIT)

View File

@@ -1,4 +1,4 @@
.. Copyright 2013-2023 Lawrence Livermore National Security, LLC and other
.. Copyright 2013-2022 Lawrence Livermore National Security, LLC and other
Spack Project Developers. See the top-level COPYRIGHT file for details.
SPDX-License-Identifier: (Apache-2.0 OR MIT)

View File

@@ -1,13 +1,13 @@
.. Copyright 2013-2023 Lawrence Livermore National Security, LLC and other
.. Copyright 2013-2022 Lawrence Livermore National Security, LLC and other
Spack Project Developers. See the top-level COPYRIGHT file for details.
SPDX-License-Identifier: (Apache-2.0 OR MIT)
.. _pythonpackage:
------
Python
------
-------------
PythonPackage
-------------
Python packages and modules have their own special build system. This
documentation covers everything you'll need to know in order to write
@@ -724,9 +724,10 @@ extends vs. depends_on
This is very similar to the naming dilemma above, with a slight twist.
As mentioned in the :ref:`Packaging Guide <packaging_extensions>`,
``extends`` and ``depends_on`` are very similar, but ``extends`` ensures
that the extension and extendee share the same prefix in views.
This allows the user to import a Python module without
``extends`` and ``depends_on`` are very similar, but ``extends`` adds
the ability to *activate* the package. Activation involves symlinking
everything in the installation prefix of the package to the installation
prefix of Python. This allows the user to import a Python module without
having to add that module to ``PYTHONPATH``.
When deciding between ``extends`` and ``depends_on``, the best rule of
@@ -734,7 +735,7 @@ thumb is to check the installation prefix. If Python libraries are
installed to ``<prefix>/lib/pythonX.Y/site-packages``, then you
should use ``extends``. If Python libraries are installed elsewhere
or the only files that get installed reside in ``<prefix>/bin``, then
don't use ``extends``.
don't use ``extends``, as symlinking the package wouldn't be useful.
^^^^^^^^^^^^^^^^^^^^^
Alternatives to Spack

View File

@@ -1,4 +1,4 @@
.. Copyright 2013-2023 Lawrence Livermore National Security, LLC and other
.. Copyright 2013-2022 Lawrence Livermore National Security, LLC and other
Spack Project Developers. See the top-level COPYRIGHT file for details.
SPDX-License-Identifier: (Apache-2.0 OR MIT)

View File

@@ -1,4 +1,4 @@
.. Copyright 2013-2023 Lawrence Livermore National Security, LLC and other
.. Copyright 2013-2021 Lawrence Livermore National Security, LLC and other
Spack Project Developers. See the top-level COPYRIGHT file for details.
SPDX-License-Identifier: (Apache-2.0 OR MIT)

View File

@@ -1,13 +1,13 @@
.. Copyright 2013-2023 Lawrence Livermore National Security, LLC and other
.. Copyright 2013-2022 Lawrence Livermore National Security, LLC and other
Spack Project Developers. See the top-level COPYRIGHT file for details.
SPDX-License-Identifier: (Apache-2.0 OR MIT)
.. _rocmpackage:
----
ROCm
----
-----------
ROCmPackage
-----------
The ``ROCmPackage`` is not a build system but a helper package. Like ``CudaPackage``,
it provides standard variants, dependencies, and conflicts to facilitate building
@@ -25,7 +25,7 @@ This package provides the following variants:
* **rocm**
This variant is used to enable/disable building with ``rocm``.
This variant is used to enable/disable building with ``rocm``.
The default is disabled (or ``False``).
* **amdgpu_target**

View File

@@ -1,13 +1,13 @@
.. Copyright 2013-2023 Lawrence Livermore National Security, LLC and other
.. Copyright 2013-2022 Lawrence Livermore National Security, LLC and other
Spack Project Developers. See the top-level COPYRIGHT file for details.
SPDX-License-Identifier: (Apache-2.0 OR MIT)
.. _rpackage:
--
R
--
--------
RPackage
--------
Like Python, R has its own built-in build system.
@@ -193,10 +193,10 @@ Build system dependencies
As an extension of the R ecosystem, your package will obviously depend
on R to build and run. Normally, we would use ``depends_on`` to express
this, but for R packages, we use ``extends``. This implies a special
dependency on R, which is used to set environment variables such as
``R_LIBS`` uniformly. Since every R package needs this, the ``RPackage``
base class contains:
this, but for R packages, we use ``extends``. ``extends`` is similar to
``depends_on``, but adds an additional feature: the ability to "activate"
the package by symlinking it to the R installation directory. Since
every R package needs this, the ``RPackage`` base class contains:
.. code-block:: python

View File

@@ -1,4 +1,4 @@
.. Copyright 2013-2023 Lawrence Livermore National Security, LLC and other
.. Copyright 2013-2022 Lawrence Livermore National Security, LLC and other
Spack Project Developers. See the top-level COPYRIGHT file for details.
SPDX-License-Identifier: (Apache-2.0 OR MIT)

View File

@@ -1,4 +1,4 @@
.. Copyright 2013-2023 Lawrence Livermore National Security, LLC and other
.. Copyright 2013-2022 Lawrence Livermore National Security, LLC and other
Spack Project Developers. See the top-level COPYRIGHT file for details.
SPDX-License-Identifier: (Apache-2.0 OR MIT)

View File

@@ -1,4 +1,4 @@
.. Copyright 2013-2023 Lawrence Livermore National Security, LLC and other
.. Copyright 2013-2022 Lawrence Livermore National Security, LLC and other
Spack Project Developers. See the top-level COPYRIGHT file for details.
SPDX-License-Identifier: (Apache-2.0 OR MIT)

View File

@@ -1,19 +1,19 @@
.. Copyright 2013-2023 Lawrence Livermore National Security, LLC and other
.. Copyright 2013-2022 Lawrence Livermore National Security, LLC and other
Spack Project Developers. See the top-level COPYRIGHT file for details.
SPDX-License-Identifier: (Apache-2.0 OR MIT)
.. _sourceforgepackage:
-----------
Sourceforge
-----------
------------------
SourceforgePackage
------------------
``SourceforgePackage`` is a
``SourceforgePackage`` is a
`mixin-class <https://en.wikipedia.org/wiki/Mixin>`_. It automatically
sets the URL based on a list of Sourceforge mirrors listed in
`sourceforge_mirror_path`, which defaults to a half dozen known mirrors.
Refer to the package source
Refer to the package source
(`<https://github.com/spack/spack/blob/develop/lib/spack/spack/build_systems/sourceforge.py>`__) for the current list of mirrors used by Spack.
@@ -29,7 +29,7 @@ This package provides a method for populating mirror URLs.
It is decorated with `property` so its results are treated as
a package attribute.
Refer to
Refer to
`<https://spack.readthedocs.io/en/latest/packaging_guide.html#mirrors-of-the-main-url>`__
for information on how Spack uses the `urls` attribute during
fetching.

View File

@@ -1,4 +1,4 @@
.. Copyright 2013-2023 Lawrence Livermore National Security, LLC and other
.. Copyright 2013-2022 Lawrence Livermore National Security, LLC and other
Spack Project Developers. See the top-level COPYRIGHT file for details.
SPDX-License-Identifier: (Apache-2.0 OR MIT)

View File

@@ -1,4 +1,4 @@
.. Copyright 2013-2023 Lawrence Livermore National Security, LLC and other
.. Copyright 2013-2022 Lawrence Livermore National Security, LLC and other
Spack Project Developers. See the top-level COPYRIGHT file for details.
SPDX-License-Identifier: (Apache-2.0 OR MIT)

View File

@@ -1,4 +1,4 @@
# Copyright 2013-2023 Lawrence Livermore National Security, LLC and other
# Copyright 2013-2022 Lawrence Livermore National Security, LLC and other
# Spack Project Developers. See the top-level COPYRIGHT file for details.
#
# SPDX-License-Identifier: (Apache-2.0 OR MIT)
@@ -36,7 +36,13 @@
if not os.path.exists(link_name):
os.symlink(os.path.abspath("../../.."), link_name, target_is_directory=True)
sys.path.insert(0, os.path.abspath("_spack_root/lib/spack/external"))
sys.path.insert(0, os.path.abspath("_spack_root/lib/spack/external/_vendoring"))
sys.path.insert(0, os.path.abspath("_spack_root/lib/spack/external/pytest-fallback"))
if sys.version_info[0] < 3:
sys.path.insert(0, os.path.abspath("_spack_root/lib/spack/external/yaml/lib"))
else:
sys.path.insert(0, os.path.abspath("_spack_root/lib/spack/external/yaml/lib3"))
sys.path.append(os.path.abspath("_spack_root/lib/spack/"))
# Add the Spack bin directory to the path so that we can use its output in docs.
@@ -74,16 +80,8 @@
"--force", # Overwrite existing files
"--no-toc", # Don't create a table of contents file
"--output-dir=.", # Directory to place all output
"--module-first", # emit module docs before submodule docs
]
sphinx_apidoc(
apidoc_args
+ [
"_spack_root/lib/spack/spack",
"_spack_root/lib/spack/spack/test/*.py",
"_spack_root/lib/spack/spack/test/cmd/*.py",
]
)
sphinx_apidoc(apidoc_args + ["_spack_root/lib/spack/spack"])
sphinx_apidoc(apidoc_args + ["_spack_root/lib/spack/llnl"])
# Enable todo items
@@ -162,8 +160,8 @@ def setup(sphinx):
master_doc = "index"
# General information about the project.
project = "Spack"
copyright = "2013-2023, Lawrence Livermore National Laboratory."
project = u"Spack"
copyright = u"2013-2021, Lawrence Livermore National Laboratory."
# The version info for the project you're documenting, acts as replacement for
# |version| and |release|, also used in various other places throughout the
@@ -208,14 +206,12 @@ def setup(sphinx):
("py:class", "_frozen_importlib_external.SourceFileLoader"),
("py:class", "clingo.Control"),
("py:class", "six.moves.urllib.parse.ParseResult"),
("py:class", "TextIO"),
# Spack classes that are private and we don't want to expose
("py:class", "spack.provider_index._IndexBase"),
("py:class", "spack.repo._PrependFileLoader"),
("py:class", "spack.build_systems._checks.BaseBuilder"),
# Spack classes that intersphinx is unable to resolve
("py:class", "spack.version.VersionBase"),
("py:class", "spack.spec.DependencySpec"),
]
# The reST default role (used for this markup: `text`) to use for all documents.
@@ -354,7 +350,7 @@ class SpackStyle(DefaultStyle):
# Grouping the document tree into LaTeX files. List of tuples
# (source start file, target name, title, author, documentclass [howto/manual]).
latex_documents = [
("index", "Spack.tex", "Spack Documentation", "Todd Gamblin", "manual"),
("index", "Spack.tex", u"Spack Documentation", u"Todd Gamblin", "manual"),
]
# The name of an image file (relative to this directory) to place at the top of
@@ -382,7 +378,7 @@ class SpackStyle(DefaultStyle):
# One entry per manual page. List of tuples
# (source start file, name, description, authors, manual section).
man_pages = [("index", "spack", "Spack Documentation", ["Todd Gamblin"], 1)]
man_pages = [("index", "spack", u"Spack Documentation", [u"Todd Gamblin"], 1)]
# If true, show URL addresses after external links.
# man_show_urls = False
@@ -397,8 +393,8 @@ class SpackStyle(DefaultStyle):
(
"index",
"Spack",
"Spack Documentation",
"Todd Gamblin",
u"Spack Documentation",
u"Todd Gamblin",
"Spack",
"One line description of project.",
"Miscellaneous",

View File

@@ -1,4 +1,4 @@
.. Copyright 2013-2023 Lawrence Livermore National Security, LLC and other
.. Copyright 2013-2022 Lawrence Livermore National Security, LLC and other
Spack Project Developers. See the top-level COPYRIGHT file for details.
SPDX-License-Identifier: (Apache-2.0 OR MIT)

View File

@@ -1,4 +1,4 @@
.. Copyright 2013-2023 Lawrence Livermore National Security, LLC and other
.. Copyright 2013-2022 Lawrence Livermore National Security, LLC and other
Spack Project Developers. See the top-level COPYRIGHT file for details.
SPDX-License-Identifier: (Apache-2.0 OR MIT)
@@ -394,7 +394,7 @@ are indicated at the start of the path with ``~`` or ``~user``.
Spack-specific variables
^^^^^^^^^^^^^^^^^^^^^^^^
Spack understands over a dozen special variables. These are:
Spack understands several special variables. These are:
* ``$env``: name of the currently active :ref:`environment <environments>`
* ``$spack``: path to the prefix of this Spack installation
@@ -405,19 +405,6 @@ Spack understands over a dozen special variables. These are:
* ``$user``: name of the current user
* ``$user_cache_path``: user cache directory (``~/.spack`` unless
:ref:`overridden <local-config-overrides>`)
* ``$architecture``: the architecture triple of the current host, as
detected by Spack.
* ``$arch``: alias for ``$architecture``.
* ``$platform``: the platform of the current host, as detected by Spack.
* ``$operating_system``: the operating system of the current host, as
detected by the ``distro`` python module.
* ``$os``: alias for ``$operating_system``.
* ``$target``: the ISA target for the current host, as detected by
ArchSpec. E.g. ``skylake`` or ``neoverse-n1``.
* ``$target_family``. The target family for the current host, as
detected by ArchSpec. E.g. ``x86_64`` or ``aarch64``.
* ``$date``: the current date in the format YYYY-MM-DD
Note that, as with shell variables, you can write these as ``$varname``
or with braces to distinguish the variable from surrounding characters:

View File

@@ -1,4 +1,4 @@
.. Copyright 2013-2023 Lawrence Livermore National Security, LLC and other
.. Copyright 2013-2022 Lawrence Livermore National Security, LLC and other
Spack Project Developers. See the top-level COPYRIGHT file for details.
SPDX-License-Identifier: (Apache-2.0 OR MIT)

View File

@@ -1,4 +1,4 @@
.. Copyright 2013-2023 Lawrence Livermore National Security, LLC and other
.. Copyright 2013-2022 Lawrence Livermore National Security, LLC and other
Spack Project Developers. See the top-level COPYRIGHT file for details.
SPDX-License-Identifier: (Apache-2.0 OR MIT)
@@ -253,6 +253,27 @@ to update them.
multiple runs of ``spack style`` just to re-compute line numbers and
makes it much easier to fix errors directly off of the CI output.
.. warning::
Flake8 and ``pep8-naming`` require a number of dependencies in order
to run. If you installed ``py-flake8`` and ``py-pep8-naming``, the
easiest way to ensure the right packages are on your ``PYTHONPATH`` is
to run::
spack activate py-flake8
spack activate pep8-naming
so that all of the dependencies are symlinked to a central
location. If you see an error message like:
.. code-block:: console
Traceback (most recent call last):
File: "/usr/bin/flake8", line 5, in <module>
from pkg_resources import load_entry_point
ImportError: No module named pkg_resources
that means Flake8 couldn't find setuptools in your ``PYTHONPATH``.
^^^^^^^^^^^^^^^^^^^
Documentation Tests
@@ -288,9 +309,13 @@ All of these can be installed with Spack, e.g.
.. code-block:: console
$ spack load py-sphinx py-sphinx-rtd-theme py-sphinxcontrib-programoutput
$ spack activate py-sphinx
$ spack activate py-sphinx-rtd-theme
$ spack activate py-sphinxcontrib-programoutput
so that all of the dependencies are added to PYTHONPATH. If you see an error message
so that all of the dependencies are symlinked into that Python's
tree. Alternatively, you could arrange for their library
directories to be added to PYTHONPATH. If you see an error message
like:
.. code-block:: console

View File

@@ -1,4 +1,4 @@
.. Copyright 2013-2023 Lawrence Livermore National Security, LLC and other
.. Copyright 2013-2022 Lawrence Livermore National Security, LLC and other
Spack Project Developers. See the top-level COPYRIGHT file for details.
SPDX-License-Identifier: (Apache-2.0 OR MIT)
@@ -175,11 +175,14 @@ Spec-related modules
^^^^^^^^^^^^^^^^^^^^
:mod:`spack.spec`
Contains :class:`~spack.spec.Spec`. Also implements most of the logic for concretization
Contains :class:`~spack.spec.Spec` and :class:`~spack.spec.SpecParser`.
Also implements most of the logic for normalization and concretization
of specs.
:mod:`spack.parser`
Contains :class:`~spack.parser.SpecParser` and functions related to parsing specs.
:mod:`spack.parse`
Contains some base classes for implementing simple recursive descent
parsers: :class:`~spack.parse.Parser` and :class:`~spack.parse.Lexer`.
Used by :class:`~spack.spec.SpecParser`.
:mod:`spack.concretize`
Contains :class:`~spack.concretize.Concretizer` implementation,
@@ -232,7 +235,7 @@ Spack Subcommands
Unit tests
^^^^^^^^^^
``spack.test``
:mod:`spack.test`
Implements Spack's test suite. Add a module and put its name in
the test suite in ``__init__.py`` to add more unit tests.

View File

@@ -1,4 +1,4 @@
.. Copyright 2013-2023 Lawrence Livermore National Security, LLC and other
.. Copyright 2013-2022 Lawrence Livermore National Security, LLC and other
Spack Project Developers. See the top-level COPYRIGHT file for details.
SPDX-License-Identifier: (Apache-2.0 OR MIT)
@@ -233,8 +233,8 @@ packages will be listed as roots of the Environment.
All of the Spack commands that act on the list of installed specs are
Environment-sensitive in this way, including ``install``,
``uninstall``, ``find``, ``extensions``, and more. In the
:ref:`environment-configuration` section we will discuss
``uninstall``, ``activate``, ``deactivate``, ``find``, ``extensions``,
and more. In the :ref:`environment-configuration` section we will discuss
Environment-sensitive commands further.
^^^^^^^^^^^^^^^^^^^^^
@@ -346,7 +346,7 @@ the Environment and then install the concretized specs.
(see :ref:`build-jobs`). To speed up environment builds further, independent
packages can be installed in parallel by launching more Spack instances. For
example, the following will build at most four packages in parallel using
three background jobs:
three background jobs:
.. code-block:: console
@@ -394,7 +394,7 @@ version (and other constraints) passed as the spec argument to the
For packages with ``git`` attributes, git branches, tags, and commits can
also be used as valid concrete versions (see :ref:`version-specifier`).
This means that for a package ``foo``, ``spack develop foo@git.main`` will clone
This means that for a package ``foo``, ``spack develop foo@git.main`` will clone
the ``main`` branch of the package, and ``spack install`` will install from
that git clone if ``foo`` is in the environment.
Further development on ``foo`` can be tested by reinstalling the environment,
@@ -519,49 +519,8 @@ available from the yaml file.
^^^^^^^^^^^^^^^^^^^
Spec concretization
^^^^^^^^^^^^^^^^^^^
An environment can be concretized in three different modes and the behavior active under
any environment is determined by the ``concretizer:unify`` configuration option.
The *default* mode is to unify all specs:
.. code-block:: yaml
spack:
specs:
- hdf5+mpi
- zlib@1.2.8
concretizer:
unify: true
This means that any package in the environment corresponds to a single concrete spec. In
the above example, when ``hdf5`` depends down the line of ``zlib``, it is required to
take ``zlib@1.2.8`` instead of a newer version. This mode of concretization is
particularly useful when environment views are used: if every package occurs in
only one flavor, it is usually possible to merge all install directories into a view.
A downside of unified concretization is that it can be overly strict. For example, a
concretization error would happen when both ``hdf5+mpi`` and ``hdf5~mpi`` are specified
in an environment.
The second mode is to *unify when possible*: this makes concretization of root specs
more independendent. Instead of requiring reuse of dependencies across different root
specs, it is only maximized:
.. code-block:: yaml
spack:
specs:
- hdf5~mpi
- hdf5+mpi
- zlib@1.2.8
concretizer:
unify: when_possible
This means that both ``hdf5`` installations will use ``zlib@1.2.8`` as a dependency even
if newer versions of that library are available.
The third mode of operation is to concretize root specs entirely independently by
disabling unified concretization:
An environment can be concretized in three different modes and the behavior active under any environment
is determined by the ``concretizer:unify`` property. By default specs are concretized *separately*, one after the other:
.. code-block:: yaml
@@ -573,11 +532,45 @@ disabling unified concretization:
concretizer:
unify: false
In this example ``hdf5`` is concretized separately, and does not consider ``zlib@1.2.8``
as a constraint or preference. Instead, it will take the latest possible version.
This mode of operation permits to deploy a full software stack where multiple configurations of the same package
need to be installed alongside each other using the best possible selection of transitive dependencies. The downside
is that redundancy of installations is disregarded completely, and thus environments might be more bloated than
strictly needed. In the example above, for instance, if a version of ``zlib`` newer than ``1.2.8`` is known to Spack,
then it will be used for both ``hdf5`` installations.
The last two concretization options are typically useful for system administrators and
user support groups providing a large software stack for their HPC center.
If redundancy of the environment is a concern, Spack provides a way to install it *together where possible*,
i.e. trying to maximize reuse of dependencies across different specs:
.. code-block:: yaml
spack:
specs:
- hdf5~mpi
- hdf5+mpi
- zlib@1.2.8
concretizer:
unify: when_possible
Also in this case Spack allows having multiple configurations of the same package, but privileges the reuse of
specs over other factors. Going back to our example, this means that both ``hdf5`` installations will use
``zlib@1.2.8`` as a dependency even if newer versions of that library are available.
Central installations done at HPC centers by system administrators or user support groups are a common case
that fits either of these two modes.
Environments can also be configured to concretize all the root specs *together*, in a self-consistent way, to
ensure that each package in the environment comes with a single configuration:
.. code-block:: yaml
spack:
specs:
- hdf5+mpi
- zlib@1.2.8
concretizer:
unify: true
This mode of operation is usually what is required by software developers that want to deploy their development
environment and have a single view of it in the filesystem.
.. note::
@@ -588,10 +581,10 @@ user support groups providing a large software stack for their HPC center.
.. admonition:: Re-concretization of user specs
When using *unified* concretization (when possible), the entire set of specs will be
When concretizing specs *together* or *together where possible* the entire set of specs will be
re-concretized after any addition of new user specs, to ensure that
the environment remains consistent / minimal. When instead unified concretization is
disabled, only the new specs will be concretized after any addition.
the environment remains consistent / minimal. When instead the specs are concretized
separately only the new specs will be re-concretized after any addition.
^^^^^^^^^^^^^
Spec Matrices
@@ -630,35 +623,6 @@ The following two Environment manifests are identical:
Spec matrices can be used to install swaths of software across various
toolchains.
Note that ordering of matrices is important. For example, the
following environments are identical:
.. code-block:: yaml
spack:
specs:
- matrix:
- [hdf5@1.10.2+mpi]
- [^mpich, ^openmpi]
- ['%gcc']
- matrix:
- [hdf5@1.12.1+mpi]
- ['%gcc']
- [^mpich, ^openmpi]
spack:
specs:
- hdf5@1.10.2+mpi ^mpich%gcc
- hdf5@1.10.2+mpi ^openmpi%gcc
- hdf5@1.12.1+mpi %gcc ^mpich
- hdf5@1.12.1+mpi %gcc ^openmpi
Notice how the first matrix applies the compiler constraints to the
mpi dependencies, whereas the second matrix applies the compiler
constraints directly to the root hdf5 node. This gives users the full
breadth of expressiveness of the spec syntax through the matrix
interface.
^^^^^^^^^^^^^^^^^^^^
Spec List References
^^^^^^^^^^^^^^^^^^^^
@@ -1068,7 +1032,7 @@ gets installed and is available for use in the ``env`` target.
$(SPACK) -e . concretize -f
env.mk: spack.lock
$(SPACK) -e . env depfile -o $@ --make-prefix spack
$(SPACK) -e . env depfile -o $@ --make-target-prefix spack
env: spack/env
$(info Environment installed!)
@@ -1091,79 +1055,27 @@ the include is conditional.
.. note::
When including generated ``Makefile``\s, it is important to use
the ``--make-prefix`` flag and use the non-phony target
``<prefix>/env`` as prerequisite, instead of the phony target
``<prefix>/all``.
the ``--make-target-prefix`` flag and use the non-phony target
``<target-prefix>/env`` as prerequisite, instead of the phony target
``<target-prefix>/all``.
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
Building a subset of the environment
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
The generated ``Makefile``\s contain install targets for each spec, identified
by ``<name>-<version>-<hash>``. This allows you to install only a subset of the
packages in the environment. When packages are unique in the environment, it's
enough to know the name and let tab-completion fill out the version and hash.
The following phony targets are available: ``install/<spec>`` to install the
spec with its dependencies, and ``install-deps/<spec>`` to *only* install
The generated ``Makefile``\s contain install targets for each spec. Given the hash
of a particular spec, you can use the ``.install/<hash>`` target to install the
spec with its dependencies. There is also ``.install-deps/<hash>`` to *only* install
its dependencies. This can be useful when certain flags should only apply to
dependencies. Below we show a use case where a spec is installed with verbose
output (``spack install --verbose``) while its dependencies are installed silently:
.. code:: console
$ spack env depfile -o Makefile
$ spack env depfile -o Makefile --make-target-prefix my_env
# Install dependencies in parallel, only show a log on error.
$ make -j16 install-deps/python-3.11.0-<hash> SPACK_INSTALL_FLAGS=--show-log-on-error
$ make -j16 my_env/.install-deps/<hash> SPACK_INSTALL_FLAGS=--show-log-on-error
# Install the root spec with verbose output.
$ make -j16 install/python-3.11.0-<hash> SPACK_INSTALL_FLAGS=--verbose
^^^^^^^^^^^^^^^^^^^^^^^^^
Adding post-install hooks
^^^^^^^^^^^^^^^^^^^^^^^^^
Another advanced use-case of generated ``Makefile``\s is running a post-install
command for each package. These "hooks" could be anything from printing a
post-install message, running tests, or pushing just-built binaries to a buildcache.
This can be accomplished through the generated ``[<prefix>/]SPACK_PACKAGE_IDS``
variable. Assuming we have an active and concrete environment, we generate the
associated ``Makefile`` with a prefix ``example``:
.. code:: console
$ spack env depfile -o env.mk --make-prefix example
And we now include it in a different ``Makefile``, in which we create a target
``example/push/%`` with ``%`` referring to a package identifier. This target
depends on the particular package installation. In this target we automatically
have the target-specific ``HASH`` and ``SPEC`` variables at our disposal. They
are respectively the spec hash (excluding leading ``/``), and a human-readable spec.
Finally, we have an entrypoint target ``push`` that will update the buildcache
index once every package is pushed. Note how this target uses the generated
``example/SPACK_PACKAGE_IDS`` variable to define its prerequisites.
.. code:: Makefile
SPACK ?= spack
BUILDCACHE_DIR = $(CURDIR)/tarballs
.PHONY: all
all: push
include env.mk
example/push/%: example/install/%
@mkdir -p $(dir $@)
$(info About to push $(SPEC) to a buildcache)
$(SPACK) -e . buildcache create --allow-root --only=package --directory $(BUILDCACHE_DIR) /$(HASH)
@touch $@
push: $(addprefix example/push/,$(example/SPACK_PACKAGE_IDS))
$(info Updating the buildcache index)
$(SPACK) -e . buildcache update-index --directory $(BUILDCACHE_DIR)
$(info Done!)
@touch $@
$ make -j16 my_env/.install/<hash> SPACK_INSTALL_FLAGS=--verbose

View File

@@ -1,4 +1,4 @@
.. Copyright 2013-2023 Lawrence Livermore National Security, LLC and other
.. Copyright 2013-2022 Lawrence Livermore National Security, LLC and other
Spack Project Developers. See the top-level COPYRIGHT file for details.
SPDX-License-Identifier: (Apache-2.0 OR MIT)

View File

@@ -1,4 +1,4 @@
.. Copyright 2013-2023 Lawrence Livermore National Security, LLC and other
.. Copyright 2013-2022 Lawrence Livermore National Security, LLC and other
Spack Project Developers. See the top-level COPYRIGHT file for details.
SPDX-License-Identifier: (Apache-2.0 OR MIT)
@@ -116,7 +116,7 @@ creates a simple python file:
# FIXME: Add a list of GitHub accounts to
# notify when the package is updated.
# maintainers("github_user1", "github_user2")
# maintainers = ["github_user1", "github_user2"]
version("0.8.13", sha256="591a9b4ec81c1f2042a97aa60564e0cb79d041c52faa7416acb38bc95bd2c76d")

View File

@@ -1,4 +1,4 @@
.. Copyright 2013-2023 Lawrence Livermore National Security, LLC and other
.. Copyright 2013-2022 Lawrence Livermore National Security, LLC and other
Spack Project Developers. See the top-level COPYRIGHT file for details.
SPDX-License-Identifier: (Apache-2.0 OR MIT)
@@ -21,9 +21,8 @@ be present on the machine where Spack is run:
:header-rows: 1
These requirements can be easily installed on most modern Linux systems;
on macOS, the Command Line Tools package is required, and a full XCode suite
may be necessary for some packages such as Qt and apple-gl. Spack is designed
to run on HPC platforms like Cray. Not all packages should be expected
on macOS, XCode is required. Spack is designed to run on HPC
platforms like Cray. Not all packages should be expected
to work on all platforms.
A build matrix showing which packages are working on which systems is shown below.
@@ -45,7 +44,7 @@ A build matrix showing which packages are working on which systems is shown belo
yum install -y epel-release
yum update -y
yum --enablerepo epel groupinstall -y "Development Tools"
yum --enablerepo epel install -y curl findutils gcc-c++ gcc gcc-gfortran git gnupg2 hostname iproute redhat-lsb-core make patch python3 python3-pip python3-setuptools unzip
yum --enablerepo epel install -y curl findutils gcc-c++ gcc gcc-gfortran git gnupg2 hostname iproute make patch python3 python3-pip python3-setuptools unzip
python3 -m pip install boto3
.. tab-item:: macOS Brew
@@ -1700,15 +1699,27 @@ If in the previous step, you did not have CMake or Ninja installed, running the
Windows Compatible Packages
"""""""""""""""""""""""""""
Not all spack packages currently have Windows support. Some are inherently incompatible with the
platform, and others simply have yet to be ported. To view the current set of packages with Windows
support, the list command should be used via `spack list -t windows`. If there's a package you'd like
to install on Windows but is not in that list, feel free to reach out to request the port or contribute
the port yourself.
Many Spack packages are not currently compatible with Windows, due to Unix
dependencies or incompatible build tools like autoconf. Here are several
packages known to work on Windows:
* abseil-cpp
* clingo
* cpuinfo
* cmake
* glm
* nasm
* netlib-lapack (requires Intel Fortran)
* ninja
* openssl
* perl
* python
* ruby
* wrf
* zlib
.. note::
This is by no means a comprehensive list, some packages may have ports that were not tagged
while others may just work out of the box on Windows and have not been tagged as such.
This is by no means a comprehensive list
^^^^^^^^^^^^^^
For developers
@@ -1720,4 +1731,3 @@ Instructions for creating the installer are at
https://github.com/spack/spack/blob/develop/lib/spack/spack/cmd/installer/README.md
Alternatively a pre-built copy of the Windows installer is available as an artifact of Spack's Windows CI
available at each run of the CI on develop or any PR.

View File

@@ -1,4 +1,4 @@
.. Copyright 2013-2023 Lawrence Livermore National Security, LLC and other
.. Copyright 2013-2022 Lawrence Livermore National Security, LLC and other
Spack Project Developers. See the top-level COPYRIGHT file for details.
SPDX-License-Identifier: (Apache-2.0 OR MIT)
@@ -56,6 +56,7 @@ or refer to the full manual below.
basic_usage
Tutorial: Spack 101 <https://spack-tutorial.readthedocs.io>
replace_conda_homebrew
known_issues
.. toctree::
:maxdepth: 2
@@ -67,6 +68,7 @@ or refer to the full manual below.
build_settings
environments
containers
monitoring
mirrors
module_file_support
repositories
@@ -77,6 +79,12 @@ or refer to the full manual below.
extensions
pipelines
.. toctree::
:maxdepth: 2
:caption: Research
analyze
.. toctree::
:maxdepth: 2
:caption: Contributing

View File

@@ -0,0 +1,40 @@
.. Copyright 2013-2022 Lawrence Livermore National Security, LLC and other
Spack Project Developers. See the top-level COPYRIGHT file for details.
SPDX-License-Identifier: (Apache-2.0 OR MIT)
============
Known Issues
============
This is a list of known issues in Spack. It provides ways of getting around these
problems if you encounter them.
------------------------------------------------
Spack does not seem to respect ``packages.yaml``
------------------------------------------------
.. note::
This issue is **resolved** as of v0.19.0.dev0 commit
`8281a0c5feabfc4fe180846d6fe95cfe53420bc5`, through the introduction of package
requirements. See :ref:`package-requirements`.
A common problem in Spack v0.18.0 up to v0.19.0.dev0 is that package, compiler and target
preferences specified in ``packages.yaml`` do not seem to be respected. Spack picks the
"wrong" compilers and their versions, package versions and variants, and
micro-architectures.
This is however not a bug. In order to reduce the number of builds of the same
packages, the concretizer values reuse of installed packages higher than preferences
set in ``packages.yaml``. Note that ``packages.yaml`` specifies only preferences, not
hard constraints.
There are multiple workarounds:
1. Disable reuse during concretization: ``spack install --fresh <spec>`` when installing
from the command line, or ``spack concretize --fresh --force`` when using
environments.
2. Turn preferences into constrains, by moving them to the input spec. For example,
use ``spack spec zlib%gcc@12`` when you want to force GCC 12 even if ``zlib`` was
already installed with GCC 10.

View File

@@ -1,4 +1,4 @@
.. Copyright 2013-2023 Lawrence Livermore National Security, LLC and other
.. Copyright 2013-2022 Lawrence Livermore National Security, LLC and other
Spack Project Developers. See the top-level COPYRIGHT file for details.
SPDX-License-Identifier: (Apache-2.0 OR MIT)

View File

@@ -1,4 +1,4 @@
.. Copyright 2013-2023 Lawrence Livermore National Security, LLC and other
.. Copyright 2013-2022 Lawrence Livermore National Security, LLC and other
Spack Project Developers. See the top-level COPYRIGHT file for details.
SPDX-License-Identifier: (Apache-2.0 OR MIT)

View File

@@ -0,0 +1,265 @@
.. Copyright 2013-2022 Lawrence Livermore National Security, LLC and other
Spack Project Developers. See the top-level COPYRIGHT file for details.
SPDX-License-Identifier: (Apache-2.0 OR MIT)
.. _monitoring:
==========
Monitoring
==========
You can use a `spack monitor <https://github.com/spack/spack-monitor>`_ "Spackmon"
server to store a database of your packages, builds, and associated metadata
for provenance, research, or some other kind of development. You should
follow the instructions in the `spack monitor documentation <https://spack-monitor.readthedocs.org>`_
to first create a server along with a username and token for yourself.
You can then use this guide to interact with the server.
-------------------
Analysis Monitoring
-------------------
To read about how to monitor an analysis (meaning you want to send analysis results
to a server) see :ref:`analyze_monitoring`.
---------------------
Monitoring An Install
---------------------
Since an install is typically when you build packages, we logically want
to tell spack to monitor during this step. Let's start with an example
where we want to monitor the install of hdf5. Unless you have disabled authentication
for the server, we first want to export our spack monitor token and username to the environment:
.. code-block:: console
$ export SPACKMON_TOKEN=50445263afd8f67e59bd79bff597836ee6c05438
$ export SPACKMON_USER=spacky
By default, the host for your server is expected to be at ``http://127.0.0.1``
with a prefix of ``ms1``, and if this is the case, you can simply add the
``--monitor`` flag to the install command:
.. code-block:: console
$ spack install --monitor hdf5
If you need to customize the host or the prefix, you can do that as well:
.. code-block:: console
$ spack install --monitor --monitor-prefix monitor --monitor-host https://monitor-service.io hdf5
As a precaution, we cut out early in the spack client if you have not provided
authentication credentials. For example, if you run the command above without
exporting your username or token, you'll see:
.. code-block:: console
==> Error: You are required to export SPACKMON_TOKEN and SPACKMON_USER
This extra check is to ensure that we don't start any builds,
and then discover that you forgot to export your token. However, if
your monitoring server has authentication disabled, you can tell this to
the client to skip this step:
.. code-block:: console
$ spack install --monitor --monitor-disable-auth hdf5
If the service is not running, you'll cleanly exit early - the install will
not continue if you've asked it to monitor and there is no service.
For example, here is what you'll see if the monitoring service is not running:
.. code-block:: console
[Errno 111] Connection refused
If you want to continue builds (and stop monitoring) you can set the ``--monitor-keep-going``
flag.
.. code-block:: console
$ spack install --monitor --monitor-keep-going hdf5
This could mean that if a request fails, you only have partial or no data
added to your monitoring database. This setting will not be applied to the
first request to check if the server is running, but to subsequent requests.
If you don't have a monitor server running and you want to build, simply
don't provide the ``--monitor`` flag! Finally, if you want to provide one or
more tags to your build, you can do:
.. code-block:: console
# Add one tag, "pizza"
$ spack install --monitor --monitor-tags pizza hdf5
# Add two tags, "pizza" and "pasta"
$ spack install --monitor --monitor-tags pizza,pasta hdf5
----------------------------
Monitoring with Containerize
----------------------------
The same argument group is available to add to a containerize command.
^^^^^^
Docker
^^^^^^
To add monitoring to a Docker container recipe generation using the defaults,
and assuming a monitor server running on localhost, you would
start with a spack.yaml in your present working directory:
.. code-block:: yaml
spack:
specs:
- samtools
And then do:
.. code-block:: console
# preview first
spack containerize --monitor
# and then write to a Dockerfile
spack containerize --monitor > Dockerfile
The install command will be edited to include commands for enabling monitoring.
However, getting secrets into the container for your monitor server is something
that should be done carefully. Specifically you should:
- Never try to define secrets as ENV, ARG, or using ``--build-arg``
- Do not try to get the secret into the container via a "temporary" file that you remove (it in fact will still exist in a layer)
Instead, it's recommended to use buildkit `as explained here <https://pythonspeed.com/articles/docker-build-secrets/>`_.
You'll need to again export environment variables for your spack monitor server:
.. code-block:: console
$ export SPACKMON_TOKEN=50445263afd8f67e59bd79bff597836ee6c05438
$ export SPACKMON_USER=spacky
And then use buildkit along with your build and identifying the name of the secret:
.. code-block:: console
$ DOCKER_BUILDKIT=1 docker build --secret id=st,env=SPACKMON_TOKEN --secret id=su,env=SPACKMON_USER -t spack/container .
The secrets are expected to come from your environment, and then will be temporarily mounted and available
at ``/run/secrets/<name>``. If you forget to supply them (and authentication is required) the build
will fail. If you need to build on your host (and interact with a spack monitor at localhost) you'll
need to tell Docker to use the host network:
.. code-block:: console
$ DOCKER_BUILDKIT=1 docker build --network="host" --secret id=st,env=SPACKMON_TOKEN --secret id=su,env=SPACKMON_USER -t spack/container .
^^^^^^^^^^^
Singularity
^^^^^^^^^^^
To add monitoring to a Singularity container build, the spack.yaml needs to
be modified slightly to specify wanting a different format:
.. code-block:: yaml
spack:
specs:
- samtools
container:
format: singularity
Again, generate the recipe:
.. code-block:: console
# preview first
$ spack containerize --monitor
# then write to a Singularity recipe
$ spack containerize --monitor > Singularity
Singularity doesn't have a direct way to define secrets at build time, so we have
to do a bit of a manual command to add a file, source secrets in it, and remove it.
Since Singularity doesn't have layers like Docker, deleting a file will truly
remove it from the container and history. So let's say we have this file,
``secrets.sh``:
.. code-block:: console
# secrets.sh
export SPACKMON_USER=spack
export SPACKMON_TOKEN=50445263afd8f67e59bd79bff597836ee6c05438
We would then generate the Singularity recipe, and add a files section,
a source of that file at the start of ``%post``, and **importantly**
a removal of the final at the end of that same section.
.. code-block::
Bootstrap: docker
From: spack/ubuntu-bionic:latest
Stage: build
%files
secrets.sh /opt/secrets.sh
%post
. /opt/secrets.sh
# spack install commands are here
...
# Don't forget to remove here!
rm /opt/secrets.sh
You can then build the container as your normally would.
.. code-block:: console
$ sudo singularity build container.sif Singularity
------------------
Monitoring Offline
------------------
In the case that you want to save monitor results to your filesystem
and then upload them later (perhaps you are in an environment where you don't
have credentials or it isn't safe to use them) you can use the ``--monitor-save-local``
flag.
.. code-block:: console
$ spack install --monitor --monitor-save-local hdf5
This will save results in a subfolder, "monitor" in your designated spack
reports folder, which defaults to ``$HOME/.spack/reports/monitor``. When
you are ready to upload them to a spack monitor server:
.. code-block:: console
$ spack monitor upload ~/.spack/reports/monitor
You can choose the root directory of results as shown above, or a specific
subdirectory. The command accepts other arguments to specify configuration
for the monitor.

View File

@@ -1,4 +1,4 @@
.. Copyright 2013-2023 Lawrence Livermore National Security, LLC and other
.. Copyright 2013-2022 Lawrence Livermore National Security, LLC and other
Spack Project Developers. See the top-level COPYRIGHT file for details.
SPDX-License-Identifier: (Apache-2.0 OR MIT)

View File

@@ -1,4 +1,4 @@
.. Copyright 2013-2023 Lawrence Livermore National Security, LLC and other
.. Copyright 2013-2022 Lawrence Livermore National Security, LLC and other
Spack Project Developers. See the top-level COPYRIGHT file for details.
SPDX-License-Identifier: (Apache-2.0 OR MIT)
@@ -34,15 +34,6 @@ ubiquitous in the scientific software community. Second, it's a modern
language and has many powerful features to help make package writing
easy.
.. warning::
As a general rule, packages should install the software *from source*.
The only exception is for proprietary software (e.g., vendor compilers).
If a special build system needs to be added in order to support building
a package from source, then the associated code and recipe need to be added
first.
.. _installation_procedure:
@@ -234,7 +225,7 @@ generates a boilerplate template for your package, and opens up the new
.. code-block:: python
:linenos:
# Copyright 2013-2023 Lawrence Livermore National Security, LLC and other
# Copyright 2013-2022 Lawrence Livermore National Security, LLC and other
# Spack Project Developers. See the top-level COPYRIGHT file for details.
#
# SPDX-License-Identifier: (Apache-2.0 OR MIT)
@@ -268,7 +259,7 @@ generates a boilerplate template for your package, and opens up the new
# FIXME: Add a list of GitHub accounts to
# notify when the package is updated.
# maintainers("github_user1", "github_user2")
# maintainers = ["github_user1", "github_user2"]
version("6.2.1", sha256="eae9326beb4158c386e39a356818031bd28f3124cf915f8c5b1dc4c7a36b4d7c")
@@ -319,8 +310,14 @@ The rest of the tasks you need to do are as follows:
#. Add a comma-separated list of maintainers.
Add a list of Github accounts of people who want to be notified
any time the package is modified. See :ref:`package_maintainers`.
The ``maintainers`` field is a list of GitHub accounts of people
who want to be notified any time the package is modified. When a
pull request is submitted that updates the package, these people
will be requested to review the PR. This is useful for developers
who maintain a Spack package for their own software, as well as
users who rely on a piece of software and want to ensure that the
package doesn't break. It also gives users a list of people to
contact for help when someone reports a build error with the package.
#. Add ``depends_on()`` calls for the package's dependencies.
@@ -491,31 +488,6 @@ some examples:
In general, you won't have to remember this naming convention because
:ref:`cmd-spack-create` and :ref:`cmd-spack-edit` handle the details for you.
.. _package_maintainers:
-----------
Maintainers
-----------
Each package in Spack may have one or more maintainers, i.e. one or more
GitHub accounts of people who want to be notified any time the package is
modified.
When a pull request is submitted that updates the package, these people will
be requested to review the PR. This is useful for developers who maintain a
Spack package for their own software, as well as users who rely on a piece of
software and want to ensure that the package doesn't break. It also gives users
a list of people to contact for help when someone reports a build error with
the package.
To add maintainers to a package, simply declare them with the ``maintainers`` directive:
.. code-block:: python
maintainers("user1", "user2")
The list of maintainers is additive, and includes all the accounts eventually declared in base classes.
-----------------
Trusted Downloads
-----------------
@@ -2425,15 +2397,13 @@ this because uninstalling the dependency would break the package.
``build``, ``link``, and ``run`` dependencies all affect the hash of Spack
packages (along with ``sha256`` sums of patches and archives used to build the
package, and a `canonical hash <https://github.com/spack/spack/pull/28156>`_ of
package, and a [canonical hash](https://github.com/spack/spack/pull/28156) of
the ``package.py`` recipes). ``test`` dependencies do not affect the package
hash, as they are only used to construct a test environment *after* building and
installing a given package installation. Older versions of Spack did not include
build dependencies in the hash, but this has been
`fixed <https://github.com/spack/spack/pull/28504>`_ as of |Spack v0.18|_.
.. |Spack v0.18| replace:: Spack ``v0.18``
.. _Spack v0.18: https://github.com/spack/spack/releases/tag/v0.18.0
build dependencies in the hash, but this has been
[fixed](https://github.com/spack/spack/pull/28504) as of [Spack
``v0.18``](https://github.com/spack/spack/releases/tag/v0.18.0)
If the dependency type is not specified, Spack uses a default of
``('build', 'link')``. This is the common case for compiler languages.
@@ -2664,12 +2634,9 @@ extendable package:
extends('python')
...
This accomplishes a few things. Firstly, the Python package can set special
variables such as ``PYTHONPATH`` for all extensions when the run or build
environment is set up. Secondly, filesystem views can ensure that extensions
are put in the same prefix as their extendee. This ensures that Python in
a view can always locate its Python packages, even without environment
variables set.
Now, the ``py-numpy`` package can be used as an argument to ``spack
activate``. When it is activated, all the files in its prefix will be
symbolically linked into the prefix of the python package.
A package can only extend one other package at a time. To support packages
that may extend one of a list of other packages, Spack supports multiple
@@ -2717,8 +2684,9 @@ variant(s) are selected. This may be accomplished with conditional
...
Sometimes, certain files in one package will conflict with those in
another, which means they cannot both be used in a view at the
same time. In this case, you can tell Spack to ignore those files:
another, which means they cannot both be activated (symlinked) at the
same time. In this case, you can tell Spack to ignore those files
when it does the activation:
.. code-block:: python
@@ -2730,7 +2698,7 @@ same time. In this case, you can tell Spack to ignore those files:
...
The code above will prevent everything in the ``$prefix/bin/`` directory
from being linked in a view.
from being linked in at activation time.
.. note::
@@ -2754,6 +2722,67 @@ extensions; as a consequence python extension packages (those inheriting from
``PythonPackage``) likewise override ``add_files_to_view`` in order to rewrite
shebang lines which point to the Python interpreter.
^^^^^^^^^^^^^^^^^^^^^^^^^
Activation & deactivation
^^^^^^^^^^^^^^^^^^^^^^^^^
Adding an extension to a view is referred to as an activation. If the view is
maintained in the Spack installation prefix of the extendee this is called a
global activation. Activations may involve updating some centralized state
that is maintained by the extendee package, so there can be additional work
for adding extensions compared with non-extension packages.
Spack's ``Package`` class has default ``activate`` and ``deactivate``
implementations that handle symbolically linking extensions' prefixes
into a specified view. Extendable packages can override these methods
to add custom activate/deactivate logic of their own. For example,
the ``activate`` and ``deactivate`` methods in the Python class handle
symbolic linking of extensions, but they also handle details surrounding
Python's ``.pth`` files, and other aspects of Python packaging.
Spack's extensions mechanism is designed to be extensible, so that
other packages (like Ruby, R, Perl, etc.) can provide their own
custom extension management logic, as they may not handle modules the
same way that Python does.
Let's look at Python's activate function:
.. literalinclude:: _spack_root/var/spack/repos/builtin/packages/python/package.py
:pyobject: Python.activate
:linenos:
This function is called on the *extendee* (Python). It first calls
``activate`` in the superclass, which handles symlinking the
extension package's prefix into the specified view. It then does
some special handling of the ``easy-install.pth`` file, part of
Python's setuptools.
Deactivate behaves similarly to activate, but it unlinks files:
.. literalinclude:: _spack_root/var/spack/repos/builtin/packages/python/package.py
:pyobject: Python.deactivate
:linenos:
Both of these methods call some custom functions in the Python
package. See the source for Spack's Python package for details.
^^^^^^^^^^^^^^^^^^^^
Activation arguments
^^^^^^^^^^^^^^^^^^^^
You may have noticed that the ``activate`` function defined above
takes keyword arguments. These are the keyword arguments from
``extends()``, and they are passed to both activate and deactivate.
This capability allows an extension to customize its own activation by
passing arguments to the extendee. Extendees can likewise implement
custom ``activate()`` and ``deactivate()`` functions to suit their
needs.
The only keyword argument supported by default is the ``ignore``
argument, which can take a regex, list of regexes, or a predicate to
determine which files *not* to symlink during activation.
.. _virtual-dependencies:
--------------------
@@ -3555,7 +3584,7 @@ will likely contain some overriding of default builder methods:
def cmake_args(self):
pass
class AutotoolsBuilder(spack.build_systems.autotools.AutotoolsBuilder):
class Autotoolsbuilder(spack.build_systems.autotools.AutotoolsBuilder):
def configure_args(self):
pass

View File

@@ -1,4 +1,4 @@
.. Copyright 2013-2023 Lawrence Livermore National Security, LLC and other
.. Copyright 2013-2022 Lawrence Livermore National Security, LLC and other
Spack Project Developers. See the top-level COPYRIGHT file for details.
SPDX-License-Identifier: (Apache-2.0 OR MIT)

View File

@@ -1,4 +1,4 @@
.. Copyright 2013-2023 Lawrence Livermore National Security, LLC and other
.. Copyright 2013-2022 Lawrence Livermore National Security, LLC and other
Spack Project Developers. See the top-level COPYRIGHT file for details.
SPDX-License-Identifier: (Apache-2.0 OR MIT)
@@ -184,48 +184,13 @@ simply run the following commands:
.. code-block:: console
$ spack env activate myenv
$ spack concretize --fresh --force
$ spack concretize --force
$ spack install
The ``--fresh`` flag tells Spack to use the latest version of every package
where possible instead of trying to optimize for reuse of existing installed
packages.
The ``--force`` flag in addition tells Spack to overwrite its previous
concretization decisions, allowing you to choose a new version of Python.
If any of the new packages like Bash are already installed, ``spack install``
won't re-install them, it will keep the symlinks in place.
-----------------------------------
Updating & Cleaning Up Old Packages
-----------------------------------
If you're looking to mimic the behavior of Homebrew, you may also want to
clean up out-of-date packages from your environment after an upgrade. To
upgrade your entire software stack within an environment and clean up old
package versions, simply run the following commands:
.. code-block:: console
$ spack env activate myenv
$ spack mark -i --all
$ spack concretize --fresh --force
$ spack install
$ spack gc
Running ``spack mark -i --all`` tells Spack to mark all of the existing
packages within an environment as "implicitly" installed. This tells
spack's garbage collection system that these packages should be cleaned up.
Don't worry however, this will not remove your entire environment.
Running ``spack install`` will reexamine your spack environment after
a fresh concretization and will re-mark any packages that should remain
installed as "explicitly" installed.
**Note:** if you use multiple spack environments you should re-run ``spack install``
in each of your environments prior to running ``spack gc`` to prevent spack
from uninstalling any shared packages that are no longer required by the
environment you just upgraded.
The ``--force`` flag tells Spack to overwrite its previous concretization
decisions, allowing you to choose a new version of Python. If any of the new
packages like Bash are already installed, ``spack install`` won't re-install
them, it will keep the symlinks in place.
--------------
Uninstallation

View File

@@ -1,4 +1,4 @@
.. Copyright 2013-2023 Lawrence Livermore National Security, LLC and other
.. Copyright 2013-2022 Lawrence Livermore National Security, LLC and other
Spack Project Developers. See the top-level COPYRIGHT file for details.
SPDX-License-Identifier: (Apache-2.0 OR MIT)

View File

@@ -1,4 +1,4 @@
# Copyright 2013-2023 Lawrence Livermore National Security, LLC and other
# Copyright 2013-2022 Lawrence Livermore National Security, LLC and other
# Spack Project Developers. See the top-level COPYRIGHT file for details.
#
# SPDX-License-Identifier: (Apache-2.0 OR MIT)

View File

@@ -1,5 +1,5 @@
Name, Supported Versions, Notes, Requirement Reason
Python, 3.6--3.11, , Interpreter for Spack
Python, 2.7/3.6-3.10, , Interpreter for Spack
C/C++ Compilers, , , Building software
make, , , Build software
patch, , , Build software
@@ -11,7 +11,6 @@ bzip2, , , Compress/Decompress archives
xz, , , Compress/Decompress archives
zstd, , Optional, Compress/Decompress archives
file, , , Create/Use Buildcaches
lsb-release, , , Linux: identify operating system version
gnupg2, , , Sign/Verify Buildcaches
git, , , Manage Software Repositories
svn, , Optional, Manage Software Repositories
1 Name Supported Versions Notes Requirement Reason
2 Python 3.6--3.11 2.7/3.6-3.10 Interpreter for Spack
3 C/C++ Compilers Building software
4 make Build software
5 patch Build software
11 xz Compress/Decompress archives
12 zstd Optional Compress/Decompress archives
13 file Create/Use Buildcaches
lsb-release Linux: identify operating system version
14 gnupg2 Sign/Verify Buildcaches
15 git Manage Software Repositories
16 svn Optional Manage Software Repositories

43
lib/spack/env/cc vendored
View File

@@ -1,7 +1,7 @@
#!/bin/sh -f
# shellcheck disable=SC2034 # evals in this script fool shellcheck
#
# Copyright 2013-2023 Lawrence Livermore National Security, LLC and other
# Copyright 2013-2022 Lawrence Livermore National Security, LLC and other
# Spack Project Developers. See the top-level COPYRIGHT file for details.
#
# SPDX-License-Identifier: (Apache-2.0 OR MIT)
@@ -440,47 +440,6 @@ while [ $# -ne 0 ]; do
continue
fi
if [ -n "${SPACK_COMPILER_FLAGS_KEEP}" ] ; then
# NOTE: the eval is required to allow `|` alternatives inside the variable
eval "\
case \"\$1\" in
$SPACK_COMPILER_FLAGS_KEEP)
append other_args_list \"\$1\"
shift
continue
;;
esac
"
fi
# the replace list is a space-separated list of pipe-separated pairs,
# the first in each pair is the original prefix to be matched, the
# second is the replacement prefix
if [ -n "${SPACK_COMPILER_FLAGS_REPLACE}" ] ; then
for rep in ${SPACK_COMPILER_FLAGS_REPLACE} ; do
before=${rep%|*}
after=${rep#*|}
eval "\
stripped=\"\${1##$before}\"
"
if [ "$stripped" = "$1" ] ; then
continue
fi
replaced="$after$stripped"
# it matched, remove it
shift
if [ -z "$replaced" ] ; then
# completely removed, continue OUTER loop
continue 2
fi
# re-build argument list with replacement
set -- "$replaced" "$@"
done
fi
case "$1" in
-isystem*)
arg="${1#-isystem}"

View File

@@ -1,4 +1,4 @@
# Copyright 2013-2023 Lawrence Livermore National Security, LLC and other
# Copyright 2013-2022 Lawrence Livermore National Security, LLC and other
# Spack Project Developers. See the top-level COPYRIGHT file for details.
#
# SPDX-License-Identifier: (Apache-2.0 OR MIT)
@@ -11,14 +11,25 @@
* Homepage: https://altgraph.readthedocs.io/en/latest/index.html
* Usage: dependency of macholib
* Version: 0.17.3
* Version: 0.17.2
archspec
--------
* Homepage: https://pypi.python.org/pypi/archspec
* Usage: Labeling, comparison and detection of microarchitectures
* Version: 0.2.0 (commit e44bad9c7b6defac73696f64078b2fe634719b62)
* Version: 0.1.4 (commit e2cfdc266174488dee78b8c9058e36d60dc1b548)
argparse
--------
* Homepage: https://pypi.python.org/pypi/argparse
* Usage: We include our own version to be Python 3.X compatible.
* Version: 1.4.0
* Note: This package has been slightly modified to improve
error message formatting. See the following commit if the
vendored copy ever needs to be updated again:
https://github.com/spack/spack/pull/6786/commits/dfcef577b77249106ea4e4c69a6cd9e64fa6c418
astunparse
----------------
@@ -41,7 +52,7 @@
* Homepage: https://github.com/python-attrs/attrs
* Usage: Needed by jsonschema.
* Version: 22.1.0
* Version: 21.2.0 (83d3cd70f90a3f4d19ee8b508e58d1c58821c0ad)
ctest_log_parser
----------------
@@ -56,14 +67,21 @@
* Homepage: https://pypi.python.org/pypi/distro
* Usage: Provides a more stable linux distribution detection.
* Version: 1.8.0
* Version: 1.6.0 (64946a1e2a9ff529047070657728600e006c99ff)
* Note: Last version supporting Python 2.7
functools32
-----------
* Homepage: https://github.com/MiCHiLU/python-functools32
* Usage: Needed by jsonschema when using Python 2.7.
* Version: 3.2.3-2
jinja2
------
* Homepage: https://pypi.python.org/pypi/Jinja2
* Usage: A modern and designer-friendly templating language for Python.
* Version: 3.0.3 (last version supporting Python 3.6)
* Version: 2.11.3 (last version supporting Python 2.7)
jsonschema
----------
@@ -78,21 +96,44 @@
* Homepage: https://macholib.readthedocs.io/en/latest/index.html#
* Usage: Manipulation of Mach-o binaries for relocating macOS buildcaches on Linux
* Version: 1.16.2
* Version: 1.15.2
markupsafe
----------
* Homepage: https://pypi.python.org/pypi/MarkupSafe
* Usage: Implements a XML/HTML/XHTML Markup safe string for Python.
* Version: 2.0.1 (last version supporting Python 3.6)
* Version: 1.1.1 (last version supporting Python 2.7)
py
--
* Homepage: https://pypi.python.org/pypi/py
* Usage: Needed by pytest. Library with cross-python path,
ini-parsing, io, code, and log facilities.
* Version: 1.4.34 (last version supporting Python 2.6)
* Note: This packages has been modified:
* https://github.com/pytest-dev/py/pull/186 was backported
pyrsistent
----------
* Homepage: http://github.com/tobgu/pyrsistent/
* Usage: Needed by `jsonschema`
* Version: 0.18.0
* Version: 0.16.1 (last version supporting Python 2.7)
* Note: We only include the parts needed for `jsonschema`.
pytest
------
* Homepage: https://pypi.python.org/pypi/pytest
* Usage: Testing framework used by Spack.
* Version: 3.2.5 (last version supporting Python 2.6)
* Note: This package has been slightly modified:
* We improve Python 2.6 compatibility. See:
https://github.com/spack/spack/pull/6801.
* We have patched pytest not to depend on setuptools. See:
https://github.com/spack/spack/pull/15612
ruamel.yaml
------

View File

@@ -1 +0,0 @@
__version__ = '0.18.0'

View File

@@ -1 +0,0 @@
from _pyrsistent_version import *

View File

@@ -1 +0,0 @@
from altgraph import *

View File

@@ -1,18 +0,0 @@
Copyright (c) 2004 Istvan Albert unless otherwise noted.
Copyright (c) 2006-2010 Bob Ippolito
Copyright (2) 2010-2020 Ronald Oussoren, et. al.
Permission is hereby granted, free of charge, to any person obtaining a copy
of this software and associated documentation files (the "Software"), to
deal in the Software without restriction, including without limitation the
rights to use, copy, modify, merge, publish, distribute, sublicense,
and/or sell copies of the Software, and to permit persons to whom the
Software is furnished to do so.
THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR
IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,
FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE
AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER
LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING
FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS
IN THE SOFTWARE.

View File

@@ -1,486 +0,0 @@
import sys
from typing import (
Any,
Callable,
ClassVar,
Dict,
Generic,
List,
Mapping,
Optional,
Protocol,
Sequence,
Tuple,
Type,
TypeVar,
Union,
overload,
)
# `import X as X` is required to make these public
from . import converters as converters
from . import exceptions as exceptions
from . import filters as filters
from . import setters as setters
from . import validators as validators
from ._cmp import cmp_using as cmp_using
from ._version_info import VersionInfo
__version__: str
__version_info__: VersionInfo
__title__: str
__description__: str
__url__: str
__uri__: str
__author__: str
__email__: str
__license__: str
__copyright__: str
_T = TypeVar("_T")
_C = TypeVar("_C", bound=type)
_EqOrderType = Union[bool, Callable[[Any], Any]]
_ValidatorType = Callable[[Any, Attribute[_T], _T], Any]
_ConverterType = Callable[[Any], Any]
_FilterType = Callable[[Attribute[_T], _T], bool]
_ReprType = Callable[[Any], str]
_ReprArgType = Union[bool, _ReprType]
_OnSetAttrType = Callable[[Any, Attribute[Any], Any], Any]
_OnSetAttrArgType = Union[
_OnSetAttrType, List[_OnSetAttrType], setters._NoOpType
]
_FieldTransformer = Callable[
[type, List[Attribute[Any]]], List[Attribute[Any]]
]
# FIXME: in reality, if multiple validators are passed they must be in a list
# or tuple, but those are invariant and so would prevent subtypes of
# _ValidatorType from working when passed in a list or tuple.
_ValidatorArgType = Union[_ValidatorType[_T], Sequence[_ValidatorType[_T]]]
# A protocol to be able to statically accept an attrs class.
class AttrsInstance(Protocol):
__attrs_attrs__: ClassVar[Any]
# _make --
NOTHING: object
# NOTE: Factory lies about its return type to make this possible:
# `x: List[int] # = Factory(list)`
# Work around mypy issue #4554 in the common case by using an overload.
if sys.version_info >= (3, 8):
from typing import Literal
@overload
def Factory(factory: Callable[[], _T]) -> _T: ...
@overload
def Factory(
factory: Callable[[Any], _T],
takes_self: Literal[True],
) -> _T: ...
@overload
def Factory(
factory: Callable[[], _T],
takes_self: Literal[False],
) -> _T: ...
else:
@overload
def Factory(factory: Callable[[], _T]) -> _T: ...
@overload
def Factory(
factory: Union[Callable[[Any], _T], Callable[[], _T]],
takes_self: bool = ...,
) -> _T: ...
# Static type inference support via __dataclass_transform__ implemented as per:
# https://github.com/microsoft/pyright/blob/1.1.135/specs/dataclass_transforms.md
# This annotation must be applied to all overloads of "define" and "attrs"
#
# NOTE: This is a typing construct and does not exist at runtime. Extensions
# wrapping attrs decorators should declare a separate __dataclass_transform__
# signature in the extension module using the specification linked above to
# provide pyright support.
def __dataclass_transform__(
*,
eq_default: bool = True,
order_default: bool = False,
kw_only_default: bool = False,
field_descriptors: Tuple[Union[type, Callable[..., Any]], ...] = (()),
) -> Callable[[_T], _T]: ...
class Attribute(Generic[_T]):
name: str
default: Optional[_T]
validator: Optional[_ValidatorType[_T]]
repr: _ReprArgType
cmp: _EqOrderType
eq: _EqOrderType
order: _EqOrderType
hash: Optional[bool]
init: bool
converter: Optional[_ConverterType]
metadata: Dict[Any, Any]
type: Optional[Type[_T]]
kw_only: bool
on_setattr: _OnSetAttrType
def evolve(self, **changes: Any) -> "Attribute[Any]": ...
# NOTE: We had several choices for the annotation to use for type arg:
# 1) Type[_T]
# - Pros: Handles simple cases correctly
# - Cons: Might produce less informative errors in the case of conflicting
# TypeVars e.g. `attr.ib(default='bad', type=int)`
# 2) Callable[..., _T]
# - Pros: Better error messages than #1 for conflicting TypeVars
# - Cons: Terrible error messages for validator checks.
# e.g. attr.ib(type=int, validator=validate_str)
# -> error: Cannot infer function type argument
# 3) type (and do all of the work in the mypy plugin)
# - Pros: Simple here, and we could customize the plugin with our own errors.
# - Cons: Would need to write mypy plugin code to handle all the cases.
# We chose option #1.
# `attr` lies about its return type to make the following possible:
# attr() -> Any
# attr(8) -> int
# attr(validator=<some callable>) -> Whatever the callable expects.
# This makes this type of assignments possible:
# x: int = attr(8)
#
# This form catches explicit None or no default but with no other arguments
# returns Any.
@overload
def attrib(
default: None = ...,
validator: None = ...,
repr: _ReprArgType = ...,
cmp: Optional[_EqOrderType] = ...,
hash: Optional[bool] = ...,
init: bool = ...,
metadata: Optional[Mapping[Any, Any]] = ...,
type: None = ...,
converter: None = ...,
factory: None = ...,
kw_only: bool = ...,
eq: Optional[_EqOrderType] = ...,
order: Optional[_EqOrderType] = ...,
on_setattr: Optional[_OnSetAttrArgType] = ...,
) -> Any: ...
# This form catches an explicit None or no default and infers the type from the
# other arguments.
@overload
def attrib(
default: None = ...,
validator: Optional[_ValidatorArgType[_T]] = ...,
repr: _ReprArgType = ...,
cmp: Optional[_EqOrderType] = ...,
hash: Optional[bool] = ...,
init: bool = ...,
metadata: Optional[Mapping[Any, Any]] = ...,
type: Optional[Type[_T]] = ...,
converter: Optional[_ConverterType] = ...,
factory: Optional[Callable[[], _T]] = ...,
kw_only: bool = ...,
eq: Optional[_EqOrderType] = ...,
order: Optional[_EqOrderType] = ...,
on_setattr: Optional[_OnSetAttrArgType] = ...,
) -> _T: ...
# This form catches an explicit default argument.
@overload
def attrib(
default: _T,
validator: Optional[_ValidatorArgType[_T]] = ...,
repr: _ReprArgType = ...,
cmp: Optional[_EqOrderType] = ...,
hash: Optional[bool] = ...,
init: bool = ...,
metadata: Optional[Mapping[Any, Any]] = ...,
type: Optional[Type[_T]] = ...,
converter: Optional[_ConverterType] = ...,
factory: Optional[Callable[[], _T]] = ...,
kw_only: bool = ...,
eq: Optional[_EqOrderType] = ...,
order: Optional[_EqOrderType] = ...,
on_setattr: Optional[_OnSetAttrArgType] = ...,
) -> _T: ...
# This form covers type=non-Type: e.g. forward references (str), Any
@overload
def attrib(
default: Optional[_T] = ...,
validator: Optional[_ValidatorArgType[_T]] = ...,
repr: _ReprArgType = ...,
cmp: Optional[_EqOrderType] = ...,
hash: Optional[bool] = ...,
init: bool = ...,
metadata: Optional[Mapping[Any, Any]] = ...,
type: object = ...,
converter: Optional[_ConverterType] = ...,
factory: Optional[Callable[[], _T]] = ...,
kw_only: bool = ...,
eq: Optional[_EqOrderType] = ...,
order: Optional[_EqOrderType] = ...,
on_setattr: Optional[_OnSetAttrArgType] = ...,
) -> Any: ...
@overload
def field(
*,
default: None = ...,
validator: None = ...,
repr: _ReprArgType = ...,
hash: Optional[bool] = ...,
init: bool = ...,
metadata: Optional[Mapping[Any, Any]] = ...,
converter: None = ...,
factory: None = ...,
kw_only: bool = ...,
eq: Optional[bool] = ...,
order: Optional[bool] = ...,
on_setattr: Optional[_OnSetAttrArgType] = ...,
) -> Any: ...
# This form catches an explicit None or no default and infers the type from the
# other arguments.
@overload
def field(
*,
default: None = ...,
validator: Optional[_ValidatorArgType[_T]] = ...,
repr: _ReprArgType = ...,
hash: Optional[bool] = ...,
init: bool = ...,
metadata: Optional[Mapping[Any, Any]] = ...,
converter: Optional[_ConverterType] = ...,
factory: Optional[Callable[[], _T]] = ...,
kw_only: bool = ...,
eq: Optional[_EqOrderType] = ...,
order: Optional[_EqOrderType] = ...,
on_setattr: Optional[_OnSetAttrArgType] = ...,
) -> _T: ...
# This form catches an explicit default argument.
@overload
def field(
*,
default: _T,
validator: Optional[_ValidatorArgType[_T]] = ...,
repr: _ReprArgType = ...,
hash: Optional[bool] = ...,
init: bool = ...,
metadata: Optional[Mapping[Any, Any]] = ...,
converter: Optional[_ConverterType] = ...,
factory: Optional[Callable[[], _T]] = ...,
kw_only: bool = ...,
eq: Optional[_EqOrderType] = ...,
order: Optional[_EqOrderType] = ...,
on_setattr: Optional[_OnSetAttrArgType] = ...,
) -> _T: ...
# This form covers type=non-Type: e.g. forward references (str), Any
@overload
def field(
*,
default: Optional[_T] = ...,
validator: Optional[_ValidatorArgType[_T]] = ...,
repr: _ReprArgType = ...,
hash: Optional[bool] = ...,
init: bool = ...,
metadata: Optional[Mapping[Any, Any]] = ...,
converter: Optional[_ConverterType] = ...,
factory: Optional[Callable[[], _T]] = ...,
kw_only: bool = ...,
eq: Optional[_EqOrderType] = ...,
order: Optional[_EqOrderType] = ...,
on_setattr: Optional[_OnSetAttrArgType] = ...,
) -> Any: ...
@overload
@__dataclass_transform__(order_default=True, field_descriptors=(attrib, field))
def attrs(
maybe_cls: _C,
these: Optional[Dict[str, Any]] = ...,
repr_ns: Optional[str] = ...,
repr: bool = ...,
cmp: Optional[_EqOrderType] = ...,
hash: Optional[bool] = ...,
init: bool = ...,
slots: bool = ...,
frozen: bool = ...,
weakref_slot: bool = ...,
str: bool = ...,
auto_attribs: bool = ...,
kw_only: bool = ...,
cache_hash: bool = ...,
auto_exc: bool = ...,
eq: Optional[_EqOrderType] = ...,
order: Optional[_EqOrderType] = ...,
auto_detect: bool = ...,
collect_by_mro: bool = ...,
getstate_setstate: Optional[bool] = ...,
on_setattr: Optional[_OnSetAttrArgType] = ...,
field_transformer: Optional[_FieldTransformer] = ...,
match_args: bool = ...,
) -> _C: ...
@overload
@__dataclass_transform__(order_default=True, field_descriptors=(attrib, field))
def attrs(
maybe_cls: None = ...,
these: Optional[Dict[str, Any]] = ...,
repr_ns: Optional[str] = ...,
repr: bool = ...,
cmp: Optional[_EqOrderType] = ...,
hash: Optional[bool] = ...,
init: bool = ...,
slots: bool = ...,
frozen: bool = ...,
weakref_slot: bool = ...,
str: bool = ...,
auto_attribs: bool = ...,
kw_only: bool = ...,
cache_hash: bool = ...,
auto_exc: bool = ...,
eq: Optional[_EqOrderType] = ...,
order: Optional[_EqOrderType] = ...,
auto_detect: bool = ...,
collect_by_mro: bool = ...,
getstate_setstate: Optional[bool] = ...,
on_setattr: Optional[_OnSetAttrArgType] = ...,
field_transformer: Optional[_FieldTransformer] = ...,
match_args: bool = ...,
) -> Callable[[_C], _C]: ...
@overload
@__dataclass_transform__(field_descriptors=(attrib, field))
def define(
maybe_cls: _C,
*,
these: Optional[Dict[str, Any]] = ...,
repr: bool = ...,
hash: Optional[bool] = ...,
init: bool = ...,
slots: bool = ...,
frozen: bool = ...,
weakref_slot: bool = ...,
str: bool = ...,
auto_attribs: bool = ...,
kw_only: bool = ...,
cache_hash: bool = ...,
auto_exc: bool = ...,
eq: Optional[bool] = ...,
order: Optional[bool] = ...,
auto_detect: bool = ...,
getstate_setstate: Optional[bool] = ...,
on_setattr: Optional[_OnSetAttrArgType] = ...,
field_transformer: Optional[_FieldTransformer] = ...,
match_args: bool = ...,
) -> _C: ...
@overload
@__dataclass_transform__(field_descriptors=(attrib, field))
def define(
maybe_cls: None = ...,
*,
these: Optional[Dict[str, Any]] = ...,
repr: bool = ...,
hash: Optional[bool] = ...,
init: bool = ...,
slots: bool = ...,
frozen: bool = ...,
weakref_slot: bool = ...,
str: bool = ...,
auto_attribs: bool = ...,
kw_only: bool = ...,
cache_hash: bool = ...,
auto_exc: bool = ...,
eq: Optional[bool] = ...,
order: Optional[bool] = ...,
auto_detect: bool = ...,
getstate_setstate: Optional[bool] = ...,
on_setattr: Optional[_OnSetAttrArgType] = ...,
field_transformer: Optional[_FieldTransformer] = ...,
match_args: bool = ...,
) -> Callable[[_C], _C]: ...
mutable = define
frozen = define # they differ only in their defaults
def fields(cls: Type[AttrsInstance]) -> Any: ...
def fields_dict(cls: Type[AttrsInstance]) -> Dict[str, Attribute[Any]]: ...
def validate(inst: AttrsInstance) -> None: ...
def resolve_types(
cls: _C,
globalns: Optional[Dict[str, Any]] = ...,
localns: Optional[Dict[str, Any]] = ...,
attribs: Optional[List[Attribute[Any]]] = ...,
) -> _C: ...
# TODO: add support for returning a proper attrs class from the mypy plugin
# we use Any instead of _CountingAttr so that e.g. `make_class('Foo',
# [attr.ib()])` is valid
def make_class(
name: str,
attrs: Union[List[str], Tuple[str, ...], Dict[str, Any]],
bases: Tuple[type, ...] = ...,
repr_ns: Optional[str] = ...,
repr: bool = ...,
cmp: Optional[_EqOrderType] = ...,
hash: Optional[bool] = ...,
init: bool = ...,
slots: bool = ...,
frozen: bool = ...,
weakref_slot: bool = ...,
str: bool = ...,
auto_attribs: bool = ...,
kw_only: bool = ...,
cache_hash: bool = ...,
auto_exc: bool = ...,
eq: Optional[_EqOrderType] = ...,
order: Optional[_EqOrderType] = ...,
collect_by_mro: bool = ...,
on_setattr: Optional[_OnSetAttrArgType] = ...,
field_transformer: Optional[_FieldTransformer] = ...,
) -> type: ...
# _funcs --
# TODO: add support for returning TypedDict from the mypy plugin
# FIXME: asdict/astuple do not honor their factory args. Waiting on one of
# these:
# https://github.com/python/mypy/issues/4236
# https://github.com/python/typing/issues/253
# XXX: remember to fix attrs.asdict/astuple too!
def asdict(
inst: AttrsInstance,
recurse: bool = ...,
filter: Optional[_FilterType[Any]] = ...,
dict_factory: Type[Mapping[Any, Any]] = ...,
retain_collection_types: bool = ...,
value_serializer: Optional[
Callable[[type, Attribute[Any], Any], Any]
] = ...,
tuple_keys: Optional[bool] = ...,
) -> Dict[str, Any]: ...
# TODO: add support for returning NamedTuple from the mypy plugin
def astuple(
inst: AttrsInstance,
recurse: bool = ...,
filter: Optional[_FilterType[Any]] = ...,
tuple_factory: Type[Sequence[Any]] = ...,
retain_collection_types: bool = ...,
) -> Tuple[Any, ...]: ...
def has(cls: type) -> bool: ...
def assoc(inst: _T, **changes: Any) -> _T: ...
def evolve(inst: _T, **changes: Any) -> _T: ...
# _config --
def set_run_validators(run: bool) -> None: ...
def get_run_validators() -> bool: ...
# aliases --
s = attributes = attrs
ib = attr = attrib
dataclass = attrs # Technically, partial(attrs, auto_attribs=True) ;)

View File

@@ -1,13 +0,0 @@
from typing import Any, Callable, Optional, Type
_CompareWithType = Callable[[Any, Any], bool]
def cmp_using(
eq: Optional[_CompareWithType],
lt: Optional[_CompareWithType],
le: Optional[_CompareWithType],
gt: Optional[_CompareWithType],
ge: Optional[_CompareWithType],
require_same_type: bool,
class_name: str,
) -> Type: ...

View File

@@ -1,185 +0,0 @@
# SPDX-License-Identifier: MIT
import inspect
import platform
import sys
import threading
import types
import warnings
from collections.abc import Mapping, Sequence # noqa
PYPY = platform.python_implementation() == "PyPy"
PY36 = sys.version_info[:2] >= (3, 6)
HAS_F_STRINGS = PY36
PY310 = sys.version_info[:2] >= (3, 10)
if PYPY or PY36:
ordered_dict = dict
else:
from collections import OrderedDict
ordered_dict = OrderedDict
def just_warn(*args, **kw):
warnings.warn(
"Running interpreter doesn't sufficiently support code object "
"introspection. Some features like bare super() or accessing "
"__class__ will not work with slotted classes.",
RuntimeWarning,
stacklevel=2,
)
class _AnnotationExtractor:
"""
Extract type annotations from a callable, returning None whenever there
is none.
"""
__slots__ = ["sig"]
def __init__(self, callable):
try:
self.sig = inspect.signature(callable)
except (ValueError, TypeError): # inspect failed
self.sig = None
def get_first_param_type(self):
"""
Return the type annotation of the first argument if it's not empty.
"""
if not self.sig:
return None
params = list(self.sig.parameters.values())
if params and params[0].annotation is not inspect.Parameter.empty:
return params[0].annotation
return None
def get_return_type(self):
"""
Return the return type if it's not empty.
"""
if (
self.sig
and self.sig.return_annotation is not inspect.Signature.empty
):
return self.sig.return_annotation
return None
def make_set_closure_cell():
"""Return a function of two arguments (cell, value) which sets
the value stored in the closure cell `cell` to `value`.
"""
# pypy makes this easy. (It also supports the logic below, but
# why not do the easy/fast thing?)
if PYPY:
def set_closure_cell(cell, value):
cell.__setstate__((value,))
return set_closure_cell
# Otherwise gotta do it the hard way.
# Create a function that will set its first cellvar to `value`.
def set_first_cellvar_to(value):
x = value
return
# This function will be eliminated as dead code, but
# not before its reference to `x` forces `x` to be
# represented as a closure cell rather than a local.
def force_x_to_be_a_cell(): # pragma: no cover
return x
try:
# Extract the code object and make sure our assumptions about
# the closure behavior are correct.
co = set_first_cellvar_to.__code__
if co.co_cellvars != ("x",) or co.co_freevars != ():
raise AssertionError # pragma: no cover
# Convert this code object to a code object that sets the
# function's first _freevar_ (not cellvar) to the argument.
if sys.version_info >= (3, 8):
def set_closure_cell(cell, value):
cell.cell_contents = value
else:
args = [co.co_argcount]
args.append(co.co_kwonlyargcount)
args.extend(
[
co.co_nlocals,
co.co_stacksize,
co.co_flags,
co.co_code,
co.co_consts,
co.co_names,
co.co_varnames,
co.co_filename,
co.co_name,
co.co_firstlineno,
co.co_lnotab,
# These two arguments are reversed:
co.co_cellvars,
co.co_freevars,
]
)
set_first_freevar_code = types.CodeType(*args)
def set_closure_cell(cell, value):
# Create a function using the set_first_freevar_code,
# whose first closure cell is `cell`. Calling it will
# change the value of that cell.
setter = types.FunctionType(
set_first_freevar_code, {}, "setter", (), (cell,)
)
# And call it to set the cell.
setter(value)
# Make sure it works on this interpreter:
def make_func_with_cell():
x = None
def func():
return x # pragma: no cover
return func
cell = make_func_with_cell().__closure__[0]
set_closure_cell(cell, 100)
if cell.cell_contents != 100:
raise AssertionError # pragma: no cover
except Exception:
return just_warn
else:
return set_closure_cell
set_closure_cell = make_set_closure_cell()
# Thread-local global to track attrs instances which are already being repr'd.
# This is needed because there is no other (thread-safe) way to pass info
# about the instances that are already being repr'd through the call stack
# in order to ensure we don't perform infinite recursion.
#
# For instance, if an instance contains a dict which contains that instance,
# we need to know that we're already repr'ing the outside instance from within
# the dict's repr() call.
#
# This lives here rather than in _make.py so that the functions in _make.py
# don't have a direct reference to the thread-local in their globals dict.
# If they have such a reference, it breaks cloudpickle.
repr_context = threading.local()

View File

@@ -1,9 +0,0 @@
class VersionInfo:
@property
def year(self) -> int: ...
@property
def minor(self) -> int: ...
@property
def micro(self) -> int: ...
@property
def releaselevel(self) -> str: ...

View File

@@ -1,13 +0,0 @@
from typing import Callable, Optional, TypeVar, overload
from . import _ConverterType
_T = TypeVar("_T")
def pipe(*validators: _ConverterType) -> _ConverterType: ...
def optional(converter: _ConverterType) -> _ConverterType: ...
@overload
def default_if_none(default: _T) -> _ConverterType: ...
@overload
def default_if_none(*, factory: Callable[[], _T]) -> _ConverterType: ...
def to_bool(val: str) -> bool: ...

View File

@@ -1,17 +0,0 @@
from typing import Any
class FrozenError(AttributeError):
msg: str = ...
class FrozenInstanceError(FrozenError): ...
class FrozenAttributeError(FrozenError): ...
class AttrsAttributeNotFoundError(ValueError): ...
class NotAnAttrsClassError(ValueError): ...
class DefaultAlreadySetError(RuntimeError): ...
class UnannotatedAttributeError(RuntimeError): ...
class PythonTooOldError(RuntimeError): ...
class NotCallableError(TypeError):
msg: str = ...
value: Any = ...
def __init__(self, msg: str, value: Any) -> None: ...

View File

@@ -1,6 +0,0 @@
from typing import Any, Union
from . import Attribute, _FilterType
def include(*what: Union[type, Attribute[Any]]) -> _FilterType[Any]: ...
def exclude(*what: Union[type, Attribute[Any]]) -> _FilterType[Any]: ...

View File

@@ -1,19 +0,0 @@
from typing import Any, NewType, NoReturn, TypeVar, cast
from . import Attribute, _OnSetAttrType
_T = TypeVar("_T")
def frozen(
instance: Any, attribute: Attribute[Any], new_value: Any
) -> NoReturn: ...
def pipe(*setters: _OnSetAttrType) -> _OnSetAttrType: ...
def validate(instance: Any, attribute: Attribute[_T], new_value: _T) -> _T: ...
# convert is allowed to return Any, because they can be chained using pipe.
def convert(
instance: Any, attribute: Attribute[Any], new_value: Any
) -> Any: ...
_NoOpType = NewType("_NoOpType", object)
NO_OP: _NoOpType

View File

@@ -1,80 +0,0 @@
from typing import (
Any,
AnyStr,
Callable,
Container,
ContextManager,
Iterable,
List,
Mapping,
Match,
Optional,
Pattern,
Tuple,
Type,
TypeVar,
Union,
overload,
)
from . import _ValidatorType
from . import _ValidatorArgType
_T = TypeVar("_T")
_T1 = TypeVar("_T1")
_T2 = TypeVar("_T2")
_T3 = TypeVar("_T3")
_I = TypeVar("_I", bound=Iterable)
_K = TypeVar("_K")
_V = TypeVar("_V")
_M = TypeVar("_M", bound=Mapping)
def set_disabled(run: bool) -> None: ...
def get_disabled() -> bool: ...
def disabled() -> ContextManager[None]: ...
# To be more precise on instance_of use some overloads.
# If there are more than 3 items in the tuple then we fall back to Any
@overload
def instance_of(type: Type[_T]) -> _ValidatorType[_T]: ...
@overload
def instance_of(type: Tuple[Type[_T]]) -> _ValidatorType[_T]: ...
@overload
def instance_of(
type: Tuple[Type[_T1], Type[_T2]]
) -> _ValidatorType[Union[_T1, _T2]]: ...
@overload
def instance_of(
type: Tuple[Type[_T1], Type[_T2], Type[_T3]]
) -> _ValidatorType[Union[_T1, _T2, _T3]]: ...
@overload
def instance_of(type: Tuple[type, ...]) -> _ValidatorType[Any]: ...
def provides(interface: Any) -> _ValidatorType[Any]: ...
def optional(
validator: Union[_ValidatorType[_T], List[_ValidatorType[_T]]]
) -> _ValidatorType[Optional[_T]]: ...
def in_(options: Container[_T]) -> _ValidatorType[_T]: ...
def and_(*validators: _ValidatorType[_T]) -> _ValidatorType[_T]: ...
def matches_re(
regex: Union[Pattern[AnyStr], AnyStr],
flags: int = ...,
func: Optional[
Callable[[AnyStr, AnyStr, int], Optional[Match[AnyStr]]]
] = ...,
) -> _ValidatorType[AnyStr]: ...
def deep_iterable(
member_validator: _ValidatorArgType[_T],
iterable_validator: Optional[_ValidatorType[_I]] = ...,
) -> _ValidatorType[_I]: ...
def deep_mapping(
key_validator: _ValidatorType[_K],
value_validator: _ValidatorType[_V],
mapping_validator: Optional[_ValidatorType[_M]] = ...,
) -> _ValidatorType[_M]: ...
def is_callable() -> _ValidatorType[_T]: ...
def lt(val: _T) -> _ValidatorType[_T]: ...
def le(val: _T) -> _ValidatorType[_T]: ...
def ge(val: _T) -> _ValidatorType[_T]: ...
def gt(val: _T) -> _ValidatorType[_T]: ...
def max_len(length: int) -> _ValidatorType[_T]: ...
def min_len(length: int) -> _ValidatorType[_T]: ...

View File

@@ -1,70 +0,0 @@
# SPDX-License-Identifier: MIT
from attr import (
NOTHING,
Attribute,
Factory,
__author__,
__copyright__,
__description__,
__doc__,
__email__,
__license__,
__title__,
__url__,
__version__,
__version_info__,
assoc,
cmp_using,
define,
evolve,
field,
fields,
fields_dict,
frozen,
has,
make_class,
mutable,
resolve_types,
validate,
)
from attr._next_gen import asdict, astuple
from . import converters, exceptions, filters, setters, validators
__all__ = [
"__author__",
"__copyright__",
"__description__",
"__doc__",
"__email__",
"__license__",
"__title__",
"__url__",
"__version__",
"__version_info__",
"asdict",
"assoc",
"astuple",
"Attribute",
"cmp_using",
"converters",
"define",
"evolve",
"exceptions",
"Factory",
"field",
"fields_dict",
"fields",
"filters",
"frozen",
"has",
"make_class",
"mutable",
"NOTHING",
"resolve_types",
"setters",
"validate",
"validators",
]

View File

@@ -1,66 +0,0 @@
from typing import (
Any,
Callable,
Dict,
Mapping,
Optional,
Sequence,
Tuple,
Type,
)
# Because we need to type our own stuff, we have to make everything from
# attr explicitly public too.
from attr import __author__ as __author__
from attr import __copyright__ as __copyright__
from attr import __description__ as __description__
from attr import __email__ as __email__
from attr import __license__ as __license__
from attr import __title__ as __title__
from attr import __url__ as __url__
from attr import __version__ as __version__
from attr import __version_info__ as __version_info__
from attr import _FilterType
from attr import assoc as assoc
from attr import Attribute as Attribute
from attr import cmp_using as cmp_using
from attr import converters as converters
from attr import define as define
from attr import evolve as evolve
from attr import exceptions as exceptions
from attr import Factory as Factory
from attr import field as field
from attr import fields as fields
from attr import fields_dict as fields_dict
from attr import filters as filters
from attr import frozen as frozen
from attr import has as has
from attr import make_class as make_class
from attr import mutable as mutable
from attr import NOTHING as NOTHING
from attr import resolve_types as resolve_types
from attr import setters as setters
from attr import validate as validate
from attr import validators as validators
# TODO: see definition of attr.asdict/astuple
def asdict(
inst: Any,
recurse: bool = ...,
filter: Optional[_FilterType[Any]] = ...,
dict_factory: Type[Mapping[Any, Any]] = ...,
retain_collection_types: bool = ...,
value_serializer: Optional[
Callable[[type, Attribute[Any], Any], Any]
] = ...,
tuple_keys: bool = ...,
) -> Dict[str, Any]: ...
# TODO: add support for returning NamedTuple from the mypy plugin
def astuple(
inst: Any,
recurse: bool = ...,
filter: Optional[_FilterType[Any]] = ...,
tuple_factory: Type[Sequence[Any]] = ...,
retain_collection_types: bool = ...,
) -> Tuple[Any, ...]: ...

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@@ -1,3 +0,0 @@
# SPDX-License-Identifier: MIT
from attr.converters import * # noqa

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@@ -1,3 +0,0 @@
# SPDX-License-Identifier: MIT
from attr.exceptions import * # noqa

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@@ -1,3 +0,0 @@
# SPDX-License-Identifier: MIT
from attr.filters import * # noqa

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@@ -1,3 +0,0 @@
# SPDX-License-Identifier: MIT
from attr.setters import * # noqa

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@@ -1,3 +0,0 @@
# SPDX-License-Identifier: MIT
from attr.validators import * # noqa

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@@ -1,202 +0,0 @@
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http://www.apache.org/licenses/
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