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64 Commits

Author SHA1 Message Date
Massimiliano Culpo
a2e5f0821b Update version number 2024-11-21 08:37:23 +01:00
Massimiliano Culpo
bb447b21cf julia: add dependency on Fortran for Openblas compilation 2024-11-19 22:21:23 +01:00
Massimiliano Culpo
6421e2a557 mpich: remove now unneeded method 2024-11-19 15:45:02 +01:00
Massimiliano Culpo
29872d5fab gmp: fix cxx dependency, remove dependency on fortran 2024-11-19 15:45:01 +01:00
Massimiliano Culpo
d395c32021 (to be removed) Make spack unit test runnable 2024-11-19 15:45:01 +01:00
Massimiliano Culpo
a68fb52aaa Update command completion
Signed-off-by: Massimiliano Culpo <massimiliano.culpo@gmail.com>
2024-11-19 15:45:00 +01:00
Massimiliano Culpo
051a656a9e Update pipeline configurations
Signed-off-by: Massimiliano Culpo <massimiliano.culpo@gmail.com>
2024-11-19 15:45:00 +01:00
Massimiliano Culpo
3121612c8f Restore message when concretizing in parallel
It was lost in #44843
2024-11-19 15:45:00 +01:00
Massimiliano Culpo
767a9909cb Add further missing C, C++ dependencies to packages 2024-11-19 15:44:59 +01:00
Massimiliano Culpo
540e1279e8 fix: a compiler package sets dependent build environment only if used as such 2024-11-19 15:44:59 +01:00
Massimiliano Culpo
1a6467c485 dyninst: add missing dependencies 2024-11-19 12:16:43 +01:00
Massimiliano Culpo
da8cbf22dc nvhpc: set run dependency on gcc 2024-11-19 12:16:43 +01:00
Massimiliano Culpo
16489a6e70 builtin: minimal fix for _get_host_config_path 2024-11-19 12:16:42 +01:00
Massimiliano Culpo
fbcb06e247 builtin: changes to packages 2024-11-19 12:16:42 +01:00
Massimiliano Culpo
c4fc739db7 Allow different target flags for different compilers 2024-11-19 12:16:41 +01:00
Massimiliano Culpo
d4d1840400 Fix setting SPACK_TARGET_ARGS for concrete specs 2024-11-19 12:16:41 +01:00
Massimiliano Culpo
09b3e862e3 Fix setting SPACK_TARGET_ARGS for concrete specs 2024-11-19 12:16:40 +01:00
Massimiliano Culpo
df18e29146 Fix concretization of julia
That package depends on llvm as a library, and the rule on compatible
targets for compilers was getting in the way.
2024-11-19 12:16:40 +01:00
Massimiliano Culpo
01aac267e4 Make Spec.compiler behavior stricter
Now the adaptor will raise if the Spec has no C, C++,
or Fortran compiler.
2024-11-19 12:16:40 +01:00
Massimiliano Culpo
013c4b8d3a Make Spec.compiler behavior stricter
Now the adaptor will raise if the Spec has no C, C++,
or Fortran compiler.
2024-11-19 12:16:39 +01:00
Massimiliano Culpo
875abbeb88 unit-tests: remove a few FIXMEs 2024-11-19 12:16:39 +01:00
Massimiliano Culpo
940b130b5e Spec.__contains__: traverse only lin/run + direct build 2024-11-19 12:16:38 +01:00
Massimiliano Culpo
57e42f6a6b Spec.__contains__: traverse only lin/run + direct build 2024-11-19 12:16:38 +01:00
Massimiliano Culpo
5ff86017cb Remove a test that should fail according to concretization rules 2024-11-19 12:16:37 +01:00
Massimiliano Culpo
d48212bc33 Add a unit-test for satisfies and __getitem__ semantic 2024-11-19 12:16:37 +01:00
Massimiliano Culpo
0c5d58e473 Add a unit-test for compiler self-dependencies 2024-11-19 12:16:36 +01:00
Massimiliano Culpo
61ab36582e Exempt "compilers" and "runtimes" from default requirements 2024-11-19 12:16:36 +01:00
Massimiliano Culpo
1740a54130 unit-tests: mark a few tests as xfail, or skip, for now
Signed-off-by: Massimiliano Culpo <massimiliano.culpo@gmail.com>
2024-11-19 12:16:36 +01:00
Massimiliano Culpo
231472884f unit-tests: fix most unit tests to account for the new model
Signed-off-by: Massimiliano Culpo <massimiliano.culpo@gmail.com>
2024-11-19 12:16:35 +01:00
Massimiliano Culpo
fc9017bf61 asp: fix intel-oneapi-compilers-classic 2024-11-19 12:16:35 +01:00
Massimiliano Culpo
4773c1fd12 Exempt "compilers" and "runtimes" from default requirements 2024-11-19 12:16:34 +01:00
Massimiliano Culpo
7df34b3524 Allow self concretization to bootstrap compilers 2024-11-19 12:16:34 +01:00
Massimiliano Culpo
79890ba242 Add more constraint to providers 2024-11-19 12:16:34 +01:00
Massimiliano Culpo
d50ed90ea6 Fix for duplicate glibc in concretization 2024-11-19 12:16:33 +01:00
Massimiliano Culpo
93eb2c0f94 Improve reporting when bootstrapping from source
Signed-off-by: Massimiliano Culpo <massimiliano.culpo@gmail.com>
2024-11-19 12:16:33 +01:00
Massimiliano Culpo
c051450541 Improve error messages for statically checked specs
Signed-off-by: Massimiliano Culpo <massimiliano.culpo@gmail.com>
2024-11-19 12:16:32 +01:00
Massimiliano Culpo
e3e258497c spec: implemented direct satisfy semantic
Signed-off-by: Massimiliano Culpo <massimiliano.culpo@gmail.com>
2024-11-19 12:16:32 +01:00
Massimiliano Culpo
dec0e60d96 compilers_for_arch: improve implementation
Signed-off-by: Massimiliano Culpo <massimiliano.culpo@gmail.com>
2024-11-19 12:16:32 +01:00
Massimiliano Culpo
f610ed9ea2 Fixup binary cache reuse
Signed-off-by: Massimiliano Culpo <massimiliano.culpo@gmail.com>
2024-11-19 12:16:31 +01:00
Massimiliano Culpo
782112e747 Write adaptors for CompilerSpec and Compiler
Signed-off-by: Massimiliano Culpo <massimiliano.culpo@gmail.com>
2024-11-19 12:16:31 +01:00
Massimiliano Culpo
0ef1b1ebfd Make BaseConfiguration pickleable
Signed-off-by: Massimiliano Culpo <massimiliano.culpo@gmail.com>
2024-11-19 12:16:30 +01:00
Massimiliano Culpo
4feed79211 (WIP) Fix cray manifest
Signed-off-by: Massimiliano Culpo <massimiliano.culpo@gmail.com>
2024-11-19 12:16:30 +01:00
Massimiliano Culpo
532e258248 (WIP) Fix LMod module generation
Signed-off-by: Massimiliano Culpo <massimiliano.culpo@gmail.com>
2024-11-19 12:16:30 +01:00
Massimiliano Culpo
cd08cb04c0 (WIP) Remove deprecated argument for Spec.format
Signed-off-by: Massimiliano Culpo <massimiliano.culpo@gmail.com>
2024-11-19 12:16:29 +01:00
Massimiliano Culpo
c86b3da9a9 fixup: spec copies compiler annotation
Signed-off-by: Massimiliano Culpo <massimiliano.culpo@gmail.com>
2024-11-19 12:16:29 +01:00
Massimiliano Culpo
463ac6d6ea Restore bootstrapping from binaries
Signed-off-by: Massimiliano Culpo <massimiliano.culpo@gmail.com>
2024-11-19 12:16:28 +01:00
Massimiliano Culpo
155d381abc Restore bootstrapping from sources
Signed-off-by: Massimiliano Culpo <massimiliano.culpo@gmail.com>
2024-11-19 12:16:28 +01:00
Massimiliano Culpo
d48bddc196 spec: change semantic of __getitem__
Now __getitem__ can pick items in the transitive link/run graph,
or from direct build dependencies.

Signed-off-by: Massimiliano Culpo <massimiliano.culpo@gmail.com>
2024-11-19 12:16:28 +01:00
Massimiliano Culpo
1dfbf91eac spec: bump specfile format to v5
Signed-off-by: Massimiliano Culpo <massimiliano.culpo@gmail.com>
2024-11-19 12:16:27 +01:00
Massimiliano Culpo
8daad8c00b Overhaul of the spack.compilers package
Now the package contains modules that help using, or
detecting, compiler packages.

Signed-off-by: Massimiliano Culpo <massimiliano.culpo@gmail.com>
2024-11-19 12:16:27 +01:00
Massimiliano Culpo
ca60f02d0f (WIP) Remove attributes from compilers
Signed-off-by: Massimiliano Culpo <massimiliano.culpo@gmail.com>
2024-11-19 12:16:26 +01:00
Massimiliano Culpo
1505de5b78 (WIP) Install mechanism 2024-11-19 12:16:26 +01:00
Massimiliano Culpo
7be0066fc8 (WIP) Recover bootstrapping from binaries on linux 2024-11-19 12:16:25 +01:00
Massimiliano Culpo
012fd8600a unit-tests: fix concretization and spack compiler tests 2024-11-19 12:16:25 +01:00
Massimiliano Culpo
6270181d0a builtin.mock et al. : changes to packages
Signed-off-by: Massimiliano Culpo <massimiliano.culpo@gmail.com>
2024-11-19 12:16:25 +01:00
Massimiliano Culpo
5f254f77da solver: first working implementation of compiler as nodes
This commit changes the model to treat compilers as nodes, and
drops the concept of a "compiler" as a bundle of a C, C++, and
Fortran compiler.

Implementation does not rely on `Compiler` or `CompilerSpec`.
2024-11-19 12:16:24 +01:00
Massimiliano Culpo
8377c452b4 Deprecate packages:all:compiler and update default configs
Signed-off-by: Massimiliano Culpo <massimiliano.culpo@gmail.com>
2024-11-19 12:16:24 +01:00
Massimiliano Culpo
666f7e6055 directives: remove workaround for the c, cxx and fortran language
Signed-off-by: Massimiliano Culpo <massimiliano.culpo@gmail.com>
2024-11-19 12:16:23 +01:00
Massimiliano Culpo
f0b23c5614 spack audit: account for % new semantic
Since % means "direct build dependency", we need to exclude
it from the check in audits.
2024-11-19 12:16:23 +01:00
Massimiliano Culpo
3dc4d1b029 Overhaul the spack compiler command
This reverts commit 2c47dddbc1.

Now, `spack compiler` writes by default in packages.yaml. Entries
in old `compilers.yaml` are converted to external specs as a way to
support legacy configuration.

Since this operation is expensive, an environment variable can be
used to enforce the deprecation of `compiler.yaml`.

The --mixed-toolchain option has been deprecated, since it stops to
make sense once compiler are treated as nodes.
2024-11-19 12:16:22 +01:00
Massimiliano Culpo
8d12f6e978 Allow reading old JSON files 2024-11-19 12:16:22 +01:00
Massimiliano Culpo
37d3c71893 parse_with_version_concrete: remove compiler= switch 2024-11-19 12:16:22 +01:00
Massimiliano Culpo
074a80a718 Make CompilerSpec raise on __init__ 2024-11-19 12:16:21 +01:00
Massimiliano Culpo
bd8e7959a8 parser: parse compilers as direct build deps 2024-11-19 12:16:16 +01:00
9611 changed files with 40100 additions and 46909 deletions

View File

@@ -66,7 +66,7 @@ jobs:
./share/spack/qa/validate_last_exit.ps1
spack -d audit externals
./share/spack/qa/validate_last_exit.ps1
- uses: actions/upload-artifact@6f51ac03b9356f520e9adb1b1b7802705f340c2b
- uses: actions/upload-artifact@b4b15b8c7c6ac21ea08fcf65892d2ee8f75cf882
if: ${{ inputs.with_coverage == 'true' && runner.os != 'Windows' }}
with:
name: coverage-audits-${{ matrix.system.os }}

View File

@@ -1,3 +1,5 @@
# (c) 2022 Lawrence Livermore National Laboratory
git config --global user.email "spack@example.com"
git config --global user.name "Test User"
git config --global core.longpaths true

View File

@@ -161,7 +161,11 @@ jobs:
source share/spack/setup-env.sh
spack -d gpg list
tree $HOME/.spack/bootstrap/store/
- name: Bootstrap File
run: |
source share/spack/setup-env.sh
spack -d python share/spack/qa/bootstrap-file.py
tree $HOME/.spack/bootstrap/store/
windows:
runs-on: "windows-latest"
@@ -192,3 +196,9 @@ jobs:
spack -d gpg list
./share/spack/qa/validate_last_exit.ps1
tree $env:userprofile/.spack/bootstrap/store/
- name: Bootstrap File
run: |
./share/spack/setup-env.ps1
spack -d python share/spack/qa/bootstrap-file.py
./share/spack/qa/validate_last_exit.ps1
tree $env:userprofile/.spack/bootstrap/store/

View File

@@ -40,30 +40,24 @@ jobs:
# 1: Platforms to build for
# 2: Base image (e.g. ubuntu:22.04)
dockerfile: [[amazon-linux, 'linux/amd64,linux/arm64', 'amazonlinux:2'],
[centos-stream9, 'linux/amd64,linux/arm64', 'centos:stream9'],
[leap15, 'linux/amd64,linux/arm64', 'opensuse/leap:15'],
[ubuntu-focal, 'linux/amd64,linux/arm64', 'ubuntu:20.04'],
[ubuntu-jammy, 'linux/amd64,linux/arm64', 'ubuntu:22.04'],
[ubuntu-noble, 'linux/amd64,linux/arm64', 'ubuntu:24.04'],
[almalinux8, 'linux/amd64,linux/arm64', 'almalinux:8'],
[almalinux9, 'linux/amd64,linux/arm64', 'almalinux:9'],
[centos-stream9, 'linux/amd64,linux/arm64,linux/ppc64le', 'centos:stream9'],
[leap15, 'linux/amd64,linux/arm64,linux/ppc64le', 'opensuse/leap:15'],
[ubuntu-focal, 'linux/amd64,linux/arm64,linux/ppc64le', 'ubuntu:20.04'],
[ubuntu-jammy, 'linux/amd64,linux/arm64,linux/ppc64le', 'ubuntu:22.04'],
[ubuntu-noble, 'linux/amd64,linux/arm64,linux/ppc64le', 'ubuntu:24.04'],
[almalinux8, 'linux/amd64,linux/arm64,linux/ppc64le', 'almalinux:8'],
[almalinux9, 'linux/amd64,linux/arm64,linux/ppc64le', 'almalinux:9'],
[rockylinux8, 'linux/amd64,linux/arm64', 'rockylinux:8'],
[rockylinux9, 'linux/amd64,linux/arm64', 'rockylinux:9'],
[fedora39, 'linux/amd64,linux/arm64', 'fedora:39'],
[fedora40, 'linux/amd64,linux/arm64', 'fedora:40']]
[fedora39, 'linux/amd64,linux/arm64,linux/ppc64le', 'fedora:39'],
[fedora40, 'linux/amd64,linux/arm64,linux/ppc64le', 'fedora:40']]
name: Build ${{ matrix.dockerfile[0] }}
if: github.repository == 'spack/spack'
steps:
- name: Checkout
uses: actions/checkout@11bd71901bbe5b1630ceea73d27597364c9af683
- name: Determine latest release tag
id: latest
run: |
git fetch --quiet --tags
echo "tag=$(git tag --list --sort=-v:refname | grep -E '^v[0-9]+\.[0-9]+\.[0-9]+$' | head -n 1)" | tee -a $GITHUB_OUTPUT
- uses: docker/metadata-action@369eb591f429131d6889c46b94e711f089e6ca96
- uses: docker/metadata-action@8e5442c4ef9f78752691e2d8f8d19755c6f78e81
id: docker_meta
with:
images: |
@@ -77,7 +71,6 @@ jobs:
type=semver,pattern={{major}}
type=ref,event=branch
type=ref,event=pr
type=raw,value=latest,enable=${{ github.ref == format('refs/tags/{0}', steps.latest.outputs.tag) }}
- name: Generate the Dockerfile
env:
@@ -94,7 +87,7 @@ jobs:
fi
- name: Upload Dockerfile
uses: actions/upload-artifact@6f51ac03b9356f520e9adb1b1b7802705f340c2b
uses: actions/upload-artifact@b4b15b8c7c6ac21ea08fcf65892d2ee8f75cf882
with:
name: dockerfiles_${{ matrix.dockerfile[0] }}
path: dockerfiles
@@ -103,7 +96,7 @@ jobs:
uses: docker/setup-qemu-action@49b3bc8e6bdd4a60e6116a5414239cba5943d3cf
- name: Set up Docker Buildx
uses: docker/setup-buildx-action@6524bf65af31da8d45b59e8c27de4bd072b392f5
uses: docker/setup-buildx-action@c47758b77c9736f4b2ef4073d4d51994fabfe349
- name: Log in to GitHub Container Registry
uses: docker/login-action@9780b0c442fbb1117ed29e0efdff1e18412f7567
@@ -120,7 +113,7 @@ jobs:
password: ${{ secrets.DOCKERHUB_TOKEN }}
- name: Build & Deploy ${{ matrix.dockerfile[0] }}
uses: docker/build-push-action@48aba3b46d1b1fec4febb7c5d0c644b249a11355
uses: docker/build-push-action@4f58ea79222b3b9dc2c8bbdd6debcef730109a75
with:
context: dockerfiles/${{ matrix.dockerfile[0] }}
platforms: ${{ matrix.dockerfile[1] }}
@@ -133,7 +126,7 @@ jobs:
needs: deploy-images
steps:
- name: Merge Artifacts
uses: actions/upload-artifact/merge@6f51ac03b9356f520e9adb1b1b7802705f340c2b
uses: actions/upload-artifact/merge@b4b15b8c7c6ac21ea08fcf65892d2ee8f75cf882
with:
name: dockerfiles
pattern: dockerfiles_*

View File

@@ -81,10 +81,6 @@ jobs:
with:
with_coverage: ${{ needs.changes.outputs.core }}
import-check:
needs: [ changes ]
uses: ./.github/workflows/import-check.yaml
all-prechecks:
needs: [ prechecks ]
if: ${{ always() }}

View File

@@ -29,8 +29,6 @@ jobs:
- run: coverage xml
- name: "Upload coverage report to CodeCov"
uses: codecov/codecov-action@1e68e06f1dbfde0e4cefc87efeba9e4643565303
uses: codecov/codecov-action@5c47607acb93fed5485fdbf7232e8a31425f672a
with:
verbose: true
fail_ci_if_error: false
token: ${{ secrets.CODECOV_TOKEN }}

View File

@@ -1,49 +0,0 @@
name: import-check
on:
workflow_call:
jobs:
# Check we don't make the situation with circular imports worse
import-check:
runs-on: ubuntu-latest
steps:
- uses: julia-actions/setup-julia@v2
with:
version: '1.10'
- uses: julia-actions/cache@v2
# PR: use the base of the PR as the old commit
- name: Checkout PR base commit
if: github.event_name == 'pull_request'
uses: actions/checkout@11bd71901bbe5b1630ceea73d27597364c9af683
with:
ref: ${{ github.event.pull_request.base.sha }}
path: old
# not a PR: use the previous commit as the old commit
- name: Checkout previous commit
if: github.event_name != 'pull_request'
uses: actions/checkout@11bd71901bbe5b1630ceea73d27597364c9af683
with:
fetch-depth: 2
path: old
- name: Checkout previous commit
if: github.event_name != 'pull_request'
run: git -C old reset --hard HEAD^
- name: Checkout new commit
uses: actions/checkout@11bd71901bbe5b1630ceea73d27597364c9af683
with:
path: new
- name: Install circular import checker
uses: actions/checkout@11bd71901bbe5b1630ceea73d27597364c9af683
with:
repository: haampie/circular-import-fighter
ref: e38bcd0aa46368e30648b61b7f0d8c1ca68aadff
path: circular-import-fighter
- name: Install dependencies
working-directory: circular-import-fighter
run: make -j dependencies
- name: Circular import check
working-directory: circular-import-fighter
run: make -j compare "SPACK_ROOT=../old ../new"

View File

@@ -2,6 +2,6 @@ black==24.10.0
clingo==5.7.1
flake8==7.1.1
isort==5.13.2
mypy==1.11.2
types-six==1.17.0.20241205
mypy==1.8.0
types-six==1.16.21.20241105
vermin==1.6.0

View File

@@ -15,17 +15,17 @@ jobs:
strategy:
matrix:
os: [ubuntu-latest]
python-version: ['3.8', '3.9', '3.10', '3.11', '3.12']
python-version: ['3.7', '3.8', '3.9', '3.10', '3.11', '3.12']
on_develop:
- ${{ github.ref == 'refs/heads/develop' }}
include:
- python-version: '3.6'
os: ubuntu-20.04
on_develop: ${{ github.ref == 'refs/heads/develop' }}
- python-version: '3.7'
os: ubuntu-22.04
on_develop: ${{ github.ref == 'refs/heads/develop' }}
exclude:
- python-version: '3.7'
os: ubuntu-latest
on_develop: false
- python-version: '3.8'
os: ubuntu-latest
on_develop: false
@@ -52,16 +52,10 @@ jobs:
# Needed for unit tests
sudo apt-get -y install \
coreutils cvs gfortran graphviz gnupg2 mercurial ninja-build \
cmake bison libbison-dev subversion
# On ubuntu 24.04, kcov was removed. It may come back in some future Ubuntu
- name: Set up Homebrew
id: set-up-homebrew
uses: Homebrew/actions/setup-homebrew@40e9946c182a64b3db1bf51be0dcb915f7802aa9
- name: Install kcov with brew
run: "brew install kcov"
cmake bison libbison-dev kcov
- name: Install Python packages
run: |
pip install --upgrade pip setuptools pytest pytest-xdist pytest-cov
pip install --upgrade pip setuptools pytest pytest-xdist pytest-cov clingo
pip install --upgrade flake8 "isort>=4.3.5" "mypy>=0.900" "click" "black"
- name: Setup git configuration
run: |
@@ -86,7 +80,7 @@ jobs:
UNIT_TEST_COVERAGE: ${{ matrix.python-version == '3.11' }}
run: |
share/spack/qa/run-unit-tests
- uses: actions/upload-artifact@6f51ac03b9356f520e9adb1b1b7802705f340c2b
- uses: actions/upload-artifact@b4b15b8c7c6ac21ea08fcf65892d2ee8f75cf882
with:
name: coverage-${{ matrix.os }}-python${{ matrix.python-version }}
path: coverage
@@ -105,13 +99,7 @@ jobs:
run: |
sudo apt-get -y update
# Needed for shell tests
sudo apt-get install -y coreutils csh zsh tcsh fish dash bash subversion
# On ubuntu 24.04, kcov was removed. It may come back in some future Ubuntu
- name: Set up Homebrew
id: set-up-homebrew
uses: Homebrew/actions/setup-homebrew@40e9946c182a64b3db1bf51be0dcb915f7802aa9
- name: Install kcov with brew
run: "brew install kcov"
sudo apt-get install -y coreutils kcov csh zsh tcsh fish dash bash
- name: Install Python packages
run: |
pip install --upgrade pip setuptools pytest coverage[toml] pytest-xdist
@@ -125,7 +113,7 @@ jobs:
COVERAGE: true
run: |
share/spack/qa/run-shell-tests
- uses: actions/upload-artifact@6f51ac03b9356f520e9adb1b1b7802705f340c2b
- uses: actions/upload-artifact@b4b15b8c7c6ac21ea08fcf65892d2ee8f75cf882
with:
name: coverage-shell
path: coverage
@@ -140,13 +128,13 @@ jobs:
- name: Install dependencies
run: |
dnf install -y \
bzip2 curl gcc-c++ gcc gcc-gfortran git gnupg2 gzip \
bzip2 curl file gcc-c++ gcc gcc-gfortran git gnupg2 gzip \
make patch tcl unzip which xz
- uses: actions/checkout@11bd71901bbe5b1630ceea73d27597364c9af683
- name: Setup repo and non-root user
run: |
git --version
git config --global --add safe.directory '*'
git config --global --add safe.directory /__w/spack/spack
git fetch --unshallow
. .github/workflows/bin/setup_git.sh
useradd spack-test
@@ -185,9 +173,8 @@ jobs:
spack bootstrap disable github-actions-v0.5
spack bootstrap disable github-actions-v0.6
spack bootstrap status
spack solve zlib
spack unit-test --verbose --cov --cov-config=pyproject.toml --cov-report=xml:coverage.xml lib/spack/spack/test/concretization/core.py
- uses: actions/upload-artifact@6f51ac03b9356f520e9adb1b1b7802705f340c2b
- uses: actions/upload-artifact@b4b15b8c7c6ac21ea08fcf65892d2ee8f75cf882
with:
name: coverage-clingo-cffi
path: coverage
@@ -223,9 +210,9 @@ jobs:
. share/spack/setup-env.sh
$(which spack) bootstrap disable spack-install
$(which spack) solve zlib
common_args=(--dist loadfile --tx '4*popen//python=./bin/spack-tmpconfig python -u ./bin/spack python' -x)
common_args=(--dist loadfile --tx '4*popen//python=./bin/spack-tmpconfig python -u ./bin/spack python')
$(which spack) unit-test --verbose --cov --cov-config=pyproject.toml --cov-report=xml:coverage.xml "${common_args[@]}"
- uses: actions/upload-artifact@6f51ac03b9356f520e9adb1b1b7802705f340c2b
- uses: actions/upload-artifact@b4b15b8c7c6ac21ea08fcf65892d2ee8f75cf882
with:
name: coverage-${{ matrix.os }}-python${{ matrix.python-version }}
path: coverage
@@ -254,9 +241,9 @@ jobs:
env:
COVERAGE_FILE: coverage/.coverage-windows
run: |
spack unit-test -x --verbose --cov --cov-config=pyproject.toml
spack unit-test --verbose --cov --cov-config=pyproject.toml
./share/spack/qa/validate_last_exit.ps1
- uses: actions/upload-artifact@6f51ac03b9356f520e9adb1b1b7802705f340c2b
- uses: actions/upload-artifact@b4b15b8c7c6ac21ea08fcf65892d2ee8f75cf882
with:
name: coverage-windows
path: coverage

View File

@@ -13,14 +13,15 @@ concurrency:
jobs:
# Validate that the code can be run on all the Python versions supported by Spack
# Validate that the code can be run on all the Python versions
# supported by Spack
validate:
runs-on: ubuntu-latest
steps:
- uses: actions/checkout@11bd71901bbe5b1630ceea73d27597364c9af683
- uses: actions/setup-python@0b93645e9fea7318ecaed2b359559ac225c90a2b
with:
python-version: '3.13'
python-version: '3.11'
cache: 'pip'
- name: Install Python Packages
run: |
@@ -39,7 +40,7 @@ jobs:
fetch-depth: 0
- uses: actions/setup-python@0b93645e9fea7318ecaed2b359559ac225c90a2b
with:
python-version: '3.13'
python-version: '3.11'
cache: 'pip'
- name: Install Python packages
run: |
@@ -58,7 +59,7 @@ jobs:
secrets: inherit
with:
with_coverage: ${{ inputs.with_coverage }}
python_version: '3.13'
python_version: '3.11'
# Check that spack can bootstrap the development environment on Python 3.6 - RHEL8
bootstrap-dev-rhel8:
runs-on: ubuntu-latest
@@ -73,7 +74,7 @@ jobs:
- name: Setup repo and non-root user
run: |
git --version
git config --global --add safe.directory '*'
git config --global --add safe.directory /__w/spack/spack
git fetch --unshallow
. .github/workflows/bin/setup_git.sh
useradd spack-test
@@ -86,21 +87,62 @@ jobs:
spack -d bootstrap now --dev
spack -d style -t black
spack unit-test -V
# Further style checks from pylint
pylint:
import-check:
runs-on: ubuntu-latest
steps:
- uses: actions/checkout@11bd71901bbe5b1630ceea73d27597364c9af683
with:
fetch-depth: 0
- uses: actions/setup-python@0b93645e9fea7318ecaed2b359559ac225c90a2b
with:
python-version: '3.13'
cache: 'pip'
- name: Install Python packages
run: |
pip install --upgrade pip setuptools pylint
- name: Pylint (Spack Core)
run: |
pylint -j 4 --disable=all --enable=unspecified-encoding --ignore-paths=lib/spack/external lib
- uses: julia-actions/setup-julia@v2
with:
version: '1.10'
- uses: julia-actions/cache@v2
# PR: use the base of the PR as the old commit
- name: Checkout PR base commit
if: github.event_name == 'pull_request'
uses: actions/checkout@11bd71901bbe5b1630ceea73d27597364c9af683
with:
ref: ${{ github.event.pull_request.base.sha }}
path: old
# not a PR: use the previous commit as the old commit
- name: Checkout previous commit
if: github.event_name != 'pull_request'
uses: actions/checkout@11bd71901bbe5b1630ceea73d27597364c9af683
with:
fetch-depth: 2
path: old
- name: Checkout previous commit
if: github.event_name != 'pull_request'
run: git -C old reset --hard HEAD^
- name: Checkout new commit
uses: actions/checkout@11bd71901bbe5b1630ceea73d27597364c9af683
with:
path: new
- name: Install circular import checker
uses: actions/checkout@11bd71901bbe5b1630ceea73d27597364c9af683
with:
repository: haampie/circular-import-fighter
ref: 9f60f51bc7134e0be73f27623f1b0357d1718427
path: circular-import-fighter
- name: Install dependencies
working-directory: circular-import-fighter
run: make -j dependencies
- name: Import cycles before
working-directory: circular-import-fighter
run: make SPACK_ROOT=../old && cp solution solution.old
- name: Import cycles after
working-directory: circular-import-fighter
run: make clean-graph && make SPACK_ROOT=../new && cp solution solution.new
- name: Compare import cycles
working-directory: circular-import-fighter
run: |
edges_before="$(grep -oP 'edges to delete: \K\d+' solution.old)"
edges_after="$(grep -oP 'edges to delete: \K\d+' solution.new)"
if [ "$edges_after" -gt "$edges_before" ]; then
printf '\033[1;31mImport check failed: %s imports need to be deleted, ' "$edges_after"
printf 'previously this was %s\033[0m\n' "$edges_before"
printf 'Compare \033[1;97m"Import cycles before"\033[0m and '
printf '\033[1;97m"Import cycles after"\033[0m to see problematic imports.\n'
exit 1
else
printf '\033[1;32mImport check passed: %s <= %s\033[0m\n' "$edges_after" "$edges_before"
fi

View File

@@ -8,9 +8,8 @@ or http://www.apache.org/licenses/LICENSE-2.0) or the MIT license,
Copyrights and patents in the Spack project are retained by contributors.
No copyright assignment is required to contribute to Spack.
Spack was originally developed in 2013 by Lawrence Livermore National
Security, LLC. It was originally distributed under the LGPL-2.1 license.
Consent from contributors to relicense to Apache-2.0/MIT is documented at
Spack was originally distributed under the LGPL-2.1 license. Consent from
contributors to relicense to Apache-2.0/MIT is documented at
https://github.com/spack/spack/issues/9137.
@@ -103,6 +102,6 @@ PackageName: sbang
PackageHomePage: https://github.com/spack/sbang
PackageLicenseDeclared: Apache-2.0 OR MIT
PackageName: typing_extensions
PackageHomePage: https://pypi.org/project/typing-extensions/
PackageLicenseDeclared: Python-2.0
PackageName: six
PackageHomePage: https://pypi.python.org/pypi/six
PackageLicenseDeclared: MIT

View File

@@ -1,6 +1,6 @@
MIT License
Copyright (c) Spack Project Developers.
Copyright (c) 2013-2024 LLNS, LLC and other Spack Project Developers.
Permission is hereby granted, free of charge, to any person obtaining a copy
of this software and associated documentation files (the "Software"), to deal

View File

@@ -70,7 +70,7 @@ Tutorial
----------------
We maintain a
[**hands-on tutorial**](https://spack-tutorial.readthedocs.io/).
[**hands-on tutorial**](https://spack.readthedocs.io/en/latest/tutorial.html).
It covers basic to advanced usage, packaging, developer features, and large HPC
deployments. You can do all of the exercises on your own laptop using a
Docker container.

View File

@@ -1,4 +1,5 @@
# Copyright Spack Project Developers. See COPYRIGHT file for details.
# Copyright 2013-2024 Lawrence Livermore National Security, LLC and other
# Spack Project Developers. See the top-level COPYRIGHT file for details.
#
# SPDX-License-Identifier: (Apache-2.0 OR MIT)
import subprocess

View File

@@ -1,6 +1,7 @@
#!/bin/sh
#
# Copyright sbang project developers. See COPYRIGHT file for details.
# Copyright 2013-2024 Lawrence Livermore National Security, LLC and other
# sbang project developers. See the top-level COPYRIGHT file for details.
#
# SPDX-License-Identifier: (Apache-2.0 OR MIT)

View File

@@ -1,7 +1,8 @@
#!/bin/sh
# -*- python -*-
#
# Copyright Spack Project Developers. See COPYRIGHT file for details.
# Copyright 2013-2024 Lawrence Livermore National Security, LLC and other
# Spack Project Developers. See the top-level COPYRIGHT file for details.
#
# SPDX-License-Identifier: (Apache-2.0 OR MIT)
@@ -25,6 +26,7 @@ exit 1
# The code above runs this file with our preferred python interpreter.
import os
import os.path
import sys
min_python3 = (3, 6)

View File

@@ -1,6 +1,7 @@
#!/bin/sh
#
# Copyright Spack Project Developers. See COPYRIGHT file for details.
# Copyright 2013-2024 Lawrence Livermore National Security, LLC and other
# Spack Project Developers. See the top-level COPYRIGHT file for details.
#
# SPDX-License-Identifier: (Apache-2.0 OR MIT)

View File

@@ -1,4 +1,5 @@
:: Copyright Spack Project Developers. See COPYRIGHT file for details.
:: Copyright 2013-2024 Lawrence Livermore National Security, LLC and other
:: Spack Project Developers. See the top-level COPYRIGHT file for details.
::
:: SPDX-License-Identifier: (Apache-2.0 OR MIT)
::#######################################################################

View File

@@ -1,4 +1,5 @@
# Copyright Spack Project Developers. See COPYRIGHT file for details.
# Copyright 2013-2024 Lawrence Livermore National Security, LLC and other
# Spack Project Developers. See the top-level COPYRIGHT file for details.
# SPDX-License-Identifier: (Apache-2.0 OR MIT)
# #######################################################################

View File

@@ -1,4 +1,5 @@
# Copyright Spack Project Developers. See COPYRIGHT file for details.
# Copyright 2013-2024 Lawrence Livermore National Security, LLC and other
# Spack Project Developers. See the top-level COPYRIGHT file for details.
#
# SPDX-License-Identifier: (Apache-2.0 OR MIT)

View File

@@ -55,11 +55,3 @@ concretizer:
splice:
explicit: []
automatic: false
# Maximum time, in seconds, allowed for the 'solve' phase. If set to 0, there is no time limit.
timeout: 0
# If set to true, exceeding the timeout will always result in a concretization error. If false,
# the best (suboptimal) model computed before the timeout is used.
#
# Setting this to false yields unreproducible results, so we advise to use that value only
# for debugging purposes (e.g. check which constraints can help Spack concretize faster).
error_on_timeout: true

View File

@@ -19,7 +19,7 @@ config:
install_tree:
root: $spack/opt/spack
projections:
all: "{architecture}/{compiler.name}-{compiler.version}/{name}-{version}-{hash}"
all: "{architecture.platform}/{architecture.target}/{name}-{version}-{hash}"
# install_tree can include an optional padded length (int or boolean)
# default is False (do not pad)
# if padded_length is True, Spack will pad as close to the system max path
@@ -194,12 +194,6 @@ config:
# executables with many dependencies, in particular on slow filesystems.
bind: false
# Controls the handling of missing dynamic libraries after installation.
# Options are ignore (default), warn, or error. If set to error, the
# installation fails if installed binaries reference dynamic libraries that
# are not found in their specified rpaths.
missing_library_policy: ignore
# Set to 'false' to allow installation on filesystems that doesn't allow setgid bit
# manipulation by unprivileged user (e.g. AFS)

View File

@@ -15,12 +15,11 @@
# -------------------------------------------------------------------------
packages:
all:
compiler:
- apple-clang
- clang
- gcc
providers:
c: [apple-clang, llvm, gcc]
cxx: [apple-clang, llvm, gcc]
elf: [libelf]
fortran: [gcc]
fuse: [macfuse]
gl: [apple-gl]
glu: [apple-glu]

View File

@@ -15,19 +15,18 @@
# -------------------------------------------------------------------------
packages:
all:
compiler: [gcc, clang, oneapi, xl, nag, fj, aocc]
providers:
awk: [gawk]
armci: [armcimpi]
blas: [openblas, amdblis]
c: [gcc]
cxx: [gcc]
c: [gcc, llvm, intel-oneapi-compilers, xl, aocc]
cxx: [gcc, llvm, intel-oneapi-compilers, xl, aocc]
D: [ldc]
daal: [intel-oneapi-daal]
elf: [elfutils]
fftw-api: [fftw, amdfftw]
flame: [libflame, amdlibflame]
fortran: [gcc]
fortran: [gcc, llvm]
fortran-rt: [gcc-runtime, intel-oneapi-runtime]
fuse: [libfuse]
gl: [glx, osmesa]
@@ -36,7 +35,7 @@ packages:
go-or-gccgo-bootstrap: [go-bootstrap, gcc]
iconv: [libiconv]
ipp: [intel-oneapi-ipp]
java: [openjdk, jdk]
java: [openjdk, jdk, ibm-java]
jpeg: [libjpeg-turbo, libjpeg]
lapack: [openblas, amdlibflame]
libc: [glibc, musl]
@@ -65,7 +64,6 @@ packages:
unwind: [libunwind]
uuid: [util-linux-uuid, libuuid]
wasi-sdk: [wasi-sdk-prebuilt]
xkbdata-api: [xkeyboard-config, xkbdata]
xxd: [xxd-standalone, vim]
yacc: [bison, byacc]
ziglang: [zig]
@@ -73,27 +71,13 @@ packages:
permissions:
read: world
write: user
cray-fftw:
buildable: false
cray-libsci:
buildable: false
cray-mpich:
buildable: false
cray-mvapich2:
buildable: false
cray-pmi:
buildable: false
egl:
buildable: false
essl:
buildable: false
fujitsu-mpi:
buildable: false
fujitsu-ssl2:
buildable: false
hpcx-mpi:
buildable: false
mpt:
buildable: false
spectrum-mpi:
buildable: false

View File

@@ -1,5 +1,5 @@
config:
locks: false
build_stage::
- '$user_cache_path/stage'
- '$spack/.staging'
stage_name: '{name}-{version}-{hash:7}'

View File

@@ -15,8 +15,8 @@
# -------------------------------------------------------------------------
packages:
all:
compiler:
- msvc
providers:
c : [msvc]
cxx: [msvc]
mpi: [msmpi]
gl: [wgl]

View File

@@ -1,4 +1,5 @@
# Copyright Spack Project Developers. See COPYRIGHT file for details.
# Copyright 2013-2024 Lawrence Livermore National Security, LLC and other
# Spack Project Developers. See the top-level COPYRIGHT file for details.
#
# SPDX-License-Identifier: (Apache-2.0 OR MIT)

View File

@@ -1,4 +1,5 @@
.. Copyright Spack Project Developers. See COPYRIGHT file for details.
.. Copyright 2013-2024 Lawrence Livermore National Security, LLC and other
Spack Project Developers. See the top-level COPYRIGHT file for details.
SPDX-License-Identifier: (Apache-2.0 OR MIT)

View File

@@ -1,4 +1,5 @@
.. Copyright Spack Project Developers. See COPYRIGHT file for details.
.. Copyright 2013-2024 Lawrence Livermore National Security, LLC and other
Spack Project Developers. See the top-level COPYRIGHT file for details.
SPDX-License-Identifier: (Apache-2.0 OR MIT)
@@ -264,30 +265,25 @@ infrastructure, or to cache Spack built binaries in Github Actions and
GitLab CI.
To get started, configure an OCI mirror using ``oci://`` as the scheme,
and optionally specify variables that hold the username and password (or
personal access token) for the registry:
and optionally specify a username and password (or personal access token):
.. code-block:: console
$ spack mirror add --oci-username-variable REGISTRY_USER \
--oci-password-variable REGISTRY_TOKEN \
my_registry oci://example.com/my_image
$ spack mirror add --oci-username username --oci-password password my_registry oci://example.com/my_image
Spack follows the naming conventions of Docker, with Dockerhub as the default
registry. To use Dockerhub, you can omit the registry domain:
.. code-block:: console
$ spack mirror add ... my_registry oci://username/my_image
$ spack mirror add --oci-username username --oci-password password my_registry oci://username/my_image
From here, you can use the mirror as any other build cache:
.. code-block:: console
$ export REGISTRY_USER=...
$ export REGISTRY_TOKEN=...
$ spack buildcache push my_registry <specs...> # push to the registry
$ spack install <specs...> # or install from the registry
$ spack install <specs...> # install from the registry
A unique feature of buildcaches on top of OCI registries is that it's incredibly
easy to generate get a runnable container image with the binaries installed. This

View File

@@ -1,4 +1,5 @@
.. Copyright Spack Project Developers. See COPYRIGHT file for details.
.. Copyright 2013-2024 Lawrence Livermore National Security, LLC and other
Spack Project Developers. See the top-level COPYRIGHT file for details.
SPDX-License-Identifier: (Apache-2.0 OR MIT)
@@ -170,7 +171,7 @@ bootstrapping.
To register the mirror on the platform where it's supposed to be used run the following command(s):
% spack bootstrap add --trust local-sources /opt/bootstrap/metadata/sources
% spack bootstrap add --trust local-binaries /opt/bootstrap/metadata/binaries
% spack buildcache update-index /opt/bootstrap/bootstrap_cache
This command needs to be run on a machine with internet access and the resulting folder
has to be moved over to the air-gapped system. Once the local sources are added using the

View File

@@ -1,4 +1,5 @@
.. Copyright Spack Project Developers. See COPYRIGHT file for details.
.. Copyright 2013-2024 Lawrence Livermore National Security, LLC and other
Spack Project Developers. See the top-level COPYRIGHT file for details.
SPDX-License-Identifier: (Apache-2.0 OR MIT)

View File

@@ -1,4 +1,5 @@
.. Copyright Spack Project Developers. See COPYRIGHT file for details.
.. Copyright 2013-2024 Lawrence Livermore National Security, LLC and other
Spack Project Developers. See the top-level COPYRIGHT file for details.
SPDX-License-Identifier: (Apache-2.0 OR MIT)

View File

@@ -1,4 +1,5 @@
.. Copyright Spack Project Developers. See COPYRIGHT file for details.
.. Copyright 2013-2024 Lawrence Livermore National Security, LLC and other
Spack Project Developers. See the top-level COPYRIGHT file for details.
SPDX-License-Identifier: (Apache-2.0 OR MIT)
@@ -272,9 +273,9 @@ often lists dependencies and the flags needed to locate them. The
"environment variables" section lists environment variables that the
build system uses to pass flags to the compiler and linker.
^^^^^^^^^^^^^^^^^^^^^^^^^
Adding flags to configure
^^^^^^^^^^^^^^^^^^^^^^^^^
^^^^^^^^^^^^^^^^^^^^^^^^^^
Addings flags to configure
^^^^^^^^^^^^^^^^^^^^^^^^^^
For most of the flags you encounter, you will want a variant to
optionally enable/disable them. You can then optionally pass these
@@ -285,7 +286,7 @@ function like so:
def configure_args(self):
args = []
...
if self.spec.satisfies("+mpi"):
args.append("--enable-mpi")
else:
@@ -299,10 +300,7 @@ Alternatively, you can use the :ref:`enable_or_disable <autotools_enable_or_dis
.. code-block:: python
def configure_args(self):
args = []
...
args.extend(self.enable_or_disable("mpi"))
return args
return [self.enable_or_disable("mpi")]
Note that we are explicitly disabling MPI support if it is not
@@ -347,14 +345,7 @@ typically used to enable or disable some feature within the package.
default=False,
description="Memchecker support for debugging [degrades performance]"
)
...
def configure_args(self):
args = []
...
args.extend(self.enable_or_disable("memchecker"))
return args
config_args.extend(self.enable_or_disable("memchecker"))
In this example, specifying the variant ``+memchecker`` will generate
the following configuration options:

View File

@@ -1,4 +1,5 @@
.. Copyright Spack Project Developers. See COPYRIGHT file for details.
.. Copyright 2013-2024 Lawrence Livermore National Security, LLC and other
Spack Project Developers. See the top-level COPYRIGHT file for details.
SPDX-License-Identifier: (Apache-2.0 OR MIT)

View File

@@ -1,4 +1,5 @@
.. Copyright Spack Project Developers. See COPYRIGHT file for details.
.. Copyright 2013-2024 Lawrence Livermore National Security, LLC and other
Spack Project Developers. See the top-level COPYRIGHT file for details.
SPDX-License-Identifier: (Apache-2.0 OR MIT)

View File

@@ -1,4 +1,5 @@
.. Copyright Spack Project Developers. See COPYRIGHT file for details.
.. Copyright 2013-2024 Lawrence Livermore National Security, LLC and other
Spack Project Developers. See the top-level COPYRIGHT file for details.
SPDX-License-Identifier: (Apache-2.0 OR MIT)

View File

@@ -1,4 +1,5 @@
.. Copyright Spack Project Developers. See COPYRIGHT file for details.
.. Copyright 2013-2024 Lawrence Livermore National Security, LLC and other
Spack Project Developers. See the top-level COPYRIGHT file for details.
SPDX-License-Identifier: (Apache-2.0 OR MIT)

View File

@@ -1,4 +1,5 @@
.. Copyright Spack Project Developers. See COPYRIGHT file for details.
.. Copyright 2013-2024 Lawrence Livermore National Security, LLC and other
Spack Project Developers. See the top-level COPYRIGHT file for details.
SPDX-License-Identifier: (Apache-2.0 OR MIT)
@@ -56,13 +57,13 @@ If you look at the ``perl`` package, you'll see:
.. code-block:: python
phases = ("configure", "build", "install")
phases = ["configure", "build", "install"]
Similarly, ``cmake`` defines:
.. code-block:: python
phases = ("bootstrap", "build", "install")
phases = ["bootstrap", "build", "install"]
If we look at the ``cmake`` example, this tells Spack's ``PackageBase``
class to run the ``bootstrap``, ``build``, and ``install`` functions

View File

@@ -1,4 +1,5 @@
.. Copyright Spack Project Developers. See COPYRIGHT file for details.
.. Copyright 2013-2024 Lawrence Livermore National Security, LLC and other
Spack Project Developers. See the top-level COPYRIGHT file for details.
SPDX-License-Identifier: (Apache-2.0 OR MIT)

View File

@@ -1,4 +1,5 @@
.. Copyright Spack Project Developers. See COPYRIGHT file for details.
.. Copyright 2013-2024 Lawrence Livermore National Security, LLC and other
Spack Project Developers. See the top-level COPYRIGHT file for details.
SPDX-License-Identifier: (Apache-2.0 OR MIT)

View File

@@ -1,4 +1,5 @@
.. Copyright Spack Project Developers. See COPYRIGHT file for details.
.. Copyright 2013-2024 Lawrence Livermore National Security, LLC and other
Spack Project Developers. See the top-level COPYRIGHT file for details.
SPDX-License-Identifier: (Apache-2.0 OR MIT)

View File

@@ -1,4 +1,5 @@
.. Copyright Spack Project Developers. See COPYRIGHT file for details.
.. Copyright 2013-2024 Lawrence Livermore National Security, LLC and other
Spack Project Developers. See the top-level COPYRIGHT file for details.
SPDX-License-Identifier: (Apache-2.0 OR MIT)

View File

@@ -1,4 +1,5 @@
.. Copyright Spack Project Developers. See COPYRIGHT file for details.
.. Copyright 2013-2024 Lawrence Livermore National Security, LLC and other
Spack Project Developers. See the top-level COPYRIGHT file for details.
SPDX-License-Identifier: (Apache-2.0 OR MIT)

View File

@@ -1,4 +1,5 @@
.. Copyright Spack Project Developers. See COPYRIGHT file for details.
.. Copyright 2013-2024 Lawrence Livermore National Security, LLC and other
Spack Project Developers. See the top-level COPYRIGHT file for details.
SPDX-License-Identifier: (Apache-2.0 OR MIT)

View File

@@ -1,4 +1,5 @@
.. Copyright Spack Project Developers. See COPYRIGHT file for details.
.. Copyright 2013-2024 Lawrence Livermore National Security, LLC and other
Spack Project Developers. See the top-level COPYRIGHT file for details.
SPDX-License-Identifier: (Apache-2.0 OR MIT)

View File

@@ -1,4 +1,5 @@
.. Copyright Spack Project Developers. See COPYRIGHT file for details.
.. Copyright 2013-2024 Lawrence Livermore National Security, LLC and other
Spack Project Developers. See the top-level COPYRIGHT file for details.
SPDX-License-Identifier: (Apache-2.0 OR MIT)

View File

@@ -1,4 +1,5 @@
.. Copyright Spack Project Developers. See COPYRIGHT file for details.
.. Copyright 2013-2024 Lawrence Livermore National Security, LLC and other
Spack Project Developers. See the top-level COPYRIGHT file for details.
SPDX-License-Identifier: (Apache-2.0 OR MIT)

View File

@@ -1,4 +1,5 @@
.. Copyright Spack Project Developers. See COPYRIGHT file for details.
.. Copyright 2013-2024 Lawrence Livermore National Security, LLC and other
Spack Project Developers. See the top-level COPYRIGHT file for details.
SPDX-License-Identifier: (Apache-2.0 OR MIT)
@@ -24,14 +25,6 @@ QMake does not appear to have a standardized way of specifying
the installation directory, so you may have to set environment
variables or edit ``*.pro`` files to get things working properly.
QMake packages will depend on the virtual ``qmake`` package which
is provided by multiple versions of Qt: ``qt`` provides Qt up to
Qt5, and ``qt-base`` provides Qt from version Qt6 onwards. This
split was motivated by the desire to split the single Qt package
into its components to allow for more fine-grained installation.
To depend on a specific version, refer to the documentation on
:ref:`virtual-dependencies`.
^^^^^^
Phases
^^^^^^

View File

@@ -1,4 +1,5 @@
.. Copyright Spack Project Developers. See COPYRIGHT file for details.
.. Copyright 2013-2024 Lawrence Livermore National Security, LLC and other
Spack Project Developers. See the top-level COPYRIGHT file for details.
SPDX-License-Identifier: (Apache-2.0 OR MIT)

View File

@@ -1,4 +1,5 @@
.. Copyright Spack Project Developers. See COPYRIGHT file for details.
.. Copyright 2013-2024 Lawrence Livermore National Security, LLC and other
Spack Project Developers. See the top-level COPYRIGHT file for details.
SPDX-License-Identifier: (Apache-2.0 OR MIT)

View File

@@ -1,4 +1,5 @@
.. Copyright Spack Project Developers. See COPYRIGHT file for details.
.. Copyright 2013-2024 Lawrence Livermore National Security, LLC and other
Spack Project Developers. See the top-level COPYRIGHT file for details.
SPDX-License-Identifier: (Apache-2.0 OR MIT)

View File

@@ -1,4 +1,5 @@
.. Copyright Spack Project Developers. See COPYRIGHT file for details.
.. Copyright 2013-2024 Lawrence Livermore National Security, LLC and other
Spack Project Developers. See the top-level COPYRIGHT file for details.
SPDX-License-Identifier: (Apache-2.0 OR MIT)

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@@ -1,4 +1,5 @@
.. Copyright Spack Project Developers. See COPYRIGHT file for details.
.. Copyright 2013-2024 Lawrence Livermore National Security, LLC and other
Spack Project Developers. See the top-level COPYRIGHT file for details.
SPDX-License-Identifier: (Apache-2.0 OR MIT)

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@@ -1,4 +1,5 @@
.. Copyright Spack Project Developers. See COPYRIGHT file for details.
.. Copyright 2013-2024 Lawrence Livermore National Security, LLC and other
Spack Project Developers. See the top-level COPYRIGHT file for details.
SPDX-License-Identifier: (Apache-2.0 OR MIT)

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@@ -1,4 +1,5 @@
.. Copyright Spack Project Developers. See COPYRIGHT file for details.
.. Copyright 2013-2024 Lawrence Livermore National Security, LLC and other
Spack Project Developers. See the top-level COPYRIGHT file for details.
SPDX-License-Identifier: (Apache-2.0 OR MIT)

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@@ -1,4 +1,5 @@
.. Copyright Spack Project Developers. See COPYRIGHT file for details.
.. Copyright 2013-2024 Lawrence Livermore National Security, LLC and other
Spack Project Developers. See the top-level COPYRIGHT file for details.
SPDX-License-Identifier: (Apache-2.0 OR MIT)

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@@ -1,4 +1,5 @@
.. Copyright Spack Project Developers. See COPYRIGHT file for details.
.. Copyright 2013-2024 Lawrence Livermore National Security, LLC and other
Spack Project Developers. See the top-level COPYRIGHT file for details.
SPDX-License-Identifier: (Apache-2.0 OR MIT)

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@@ -1,4 +1,5 @@
# Copyright Spack Project Developers. See COPYRIGHT file for details.
# Copyright 2013-2024 Lawrence Livermore National Security, LLC and other
# Spack Project Developers. See the top-level COPYRIGHT file for details.
#
# SPDX-License-Identifier: (Apache-2.0 OR MIT)

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@@ -1,4 +1,5 @@
.. Copyright Spack Project Developers. See COPYRIGHT file for details.
.. Copyright 2013-2024 Lawrence Livermore National Security, LLC and other
Spack Project Developers. See the top-level COPYRIGHT file for details.
SPDX-License-Identifier: (Apache-2.0 OR MIT)
@@ -25,23 +26,14 @@ These settings can be overridden in ``etc/spack/config.yaml`` or
The location where Spack will install packages and their dependencies.
Default is ``$spack/opt/spack``.
---------------
``projections``
---------------
---------------------------------------------------
``install_hash_length`` and ``install_path_scheme``
---------------------------------------------------
.. warning::
Modifying projections of the install tree is strongly discouraged.
By default Spack installs all packages into a unique directory relative to the install
tree root with the following layout:
.. code-block::
{architecture}/{compiler.name}-{compiler.version}/{name}-{version}-{hash}
In very rare cases, it may be necessary to reduce the length of this path. For example,
very old versions of the Intel compiler are known to segfault when input paths are too long:
The default Spack installation path can be very long and can create problems
for scripts with hardcoded shebangs. Additionally, when using the Intel
compiler, and if there is also a long list of dependencies, the compiler may
segfault. If you see the following:
.. code-block:: console
@@ -49,25 +41,36 @@ very old versions of the Intel compiler are known to segfault when input paths a
** Segmentation violation signal raised. **
Access violation or stack overflow. Please contact Intel Support for assistance.
Another case is Python and R packages with many runtime dependencies, which can result
in very large ``PYTHONPATH`` and ``R_LIBS`` environment variables. This can cause the
``execve`` system call to fail with ``E2BIG``, preventing processes from starting.
it may be because variables containing dependency specs may be too long. There
are two parameters to help with long path names. Firstly, the
``install_hash_length`` parameter can set the length of the hash in the
installation path from 1 to 32. The default path uses the full 32 characters.
For this reason, Spack allows users to modify the installation layout through custom
projections. For example
Secondly, it is also possible to modify the entire installation
scheme. By default Spack uses
``{architecture}/{compiler.name}-{compiler.version}/{name}-{version}-{hash}``
where the tokens that are available for use in this directive are the
same as those understood by the :meth:`~spack.spec.Spec.format`
method. Using this parameter it is possible to use a different package
layout or reduce the depth of the installation paths. For example
.. code-block:: yaml
config:
install_tree:
root: $spack/opt/spack
projections:
all: "{name}/{version}/{hash:16}"
install_path_scheme: '{name}/{version}/{hash:7}'
would install packages into sub-directories using only the package name, version and a
hash length of 16 characters.
would install packages into sub-directories using only the package
name, version and a hash length of 7 characters.
Notice that reducing the hash length increases the likelihood of hash collisions.
When using either parameter to set the hash length it only affects the
representation of the hash in the installation directory. You
should be aware that the smaller the hash length the more likely
naming conflicts will occur. These parameters are independent of those
used to configure module names.
.. warning:: Modifying the installation hash length or path scheme after
packages have been installed will prevent Spack from being
able to find the old installation directories.
--------------------
``build_stage``

View File

@@ -1,4 +1,5 @@
.. Copyright Spack Project Developers. See COPYRIGHT file for details.
.. Copyright 2013-2024 Lawrence Livermore National Security, LLC and other
Spack Project Developers. See the top-level COPYRIGHT file for details.
SPDX-License-Identifier: (Apache-2.0 OR MIT)

View File

@@ -1,4 +1,5 @@
.. Copyright Spack Project Developers. See COPYRIGHT file for details.
.. Copyright 2013-2024 Lawrence Livermore National Security, LLC and other
Spack Project Developers. See the top-level COPYRIGHT file for details.
SPDX-License-Identifier: (Apache-2.0 OR MIT)
@@ -37,11 +38,9 @@ just have to configure and OCI registry and run ``spack buildcache push``.
spack -e . install
# Configure the registry
spack -e . mirror add --oci-username-variable REGISTRY_USER \
--oci-password-variable REGISTRY_TOKEN \
container-registry oci://example.com/name/image
spack -e . mirror add --oci-username ... --oci-password ... container-registry oci://example.com/name/image
# Push the image (do set REGISTRY_USER and REGISTRY_TOKEN)
# Push the image
spack -e . buildcache push --update-index --base-image ubuntu:22.04 --tag my_env container-registry
The resulting container image can then be run as follows:

View File

@@ -1,4 +1,5 @@
.. Copyright Spack Project Developers. See COPYRIGHT file for details.
.. Copyright 2013-2024 Lawrence Livermore National Security, LLC and other
Spack Project Developers. See the top-level COPYRIGHT file for details.
SPDX-License-Identifier: (Apache-2.0 OR MIT)
@@ -361,6 +362,7 @@ and the tags associated with the class of runners to build on.
* ``.linux_neoverse_n1``
* ``.linux_neoverse_v1``
* ``.linux_neoverse_v2``
* ``.linux_power``
* ``.linux_skylake``
* ``.linux_x86_64``
* ``.linux_x86_64_v4``

View File

@@ -1,4 +1,5 @@
.. Copyright Spack Project Developers. See COPYRIGHT file for details.
.. Copyright 2013-2024 Lawrence Livermore National Security, LLC and other
Spack Project Developers. See the top-level COPYRIGHT file for details.
SPDX-License-Identifier: (Apache-2.0 OR MIT)
@@ -177,8 +178,8 @@ Spec-related modules
Contains :class:`~spack.spec.Spec`. Also implements most of the logic for concretization
of specs.
:mod:`spack.spec_parser`
Contains :class:`~spack.spec_parser.SpecParser` and functions related to parsing specs.
:mod:`spack.parser`
Contains :class:`~spack.parser.SpecParser` and functions related to parsing specs.
:mod:`spack.version`
Implements a simple :class:`~spack.version.Version` class with simple
@@ -543,10 +544,10 @@ With either interpreter you can run a single command:
.. code-block:: console
$ spack python -c 'from spack.concretize import concretize_one; concretize_one("python")'
$ spack python -c 'from spack.spec import Spec; Spec("python").concretized()'
...
$ spack python -i ipython -c 'from spack.concretize import concretize_one; concretize_one("python")'
$ spack python -i ipython -c 'from spack.spec import Spec; Spec("python").concretized()'
Out[1]: ...
or a file:

View File

@@ -1,4 +1,5 @@
.. Copyright Spack Project Developers. See COPYRIGHT file for details.
.. Copyright 2013-2024 Lawrence Livermore National Security, LLC and other
Spack Project Developers. See the top-level COPYRIGHT file for details.
SPDX-License-Identifier: (Apache-2.0 OR MIT)
@@ -112,19 +113,6 @@ the original but may concretize differently in the presence of different
explicit or default configuration settings (e.g., a different version of
Spack or for a different user account).
Environments created from a manifest will copy any included configs
from relative paths inside the environment. Relative paths from
outside the environment will cause errors, and absolute paths will be
kept absolute. For example, if ``spack.yaml`` includes:
.. code-block:: yaml
spack:
include: [./config.yaml]
then the created environment will have its own copy of the file
``config.yaml`` copied from the location in the original environment.
Create an environment from a ``spack.lock`` file using:
.. code-block:: console
@@ -173,7 +161,7 @@ accepts. If an environment already exists then spack will simply activate it
and ignore the create-specific flags.
.. code-block:: console
$ spack env activate --create -p myenv
# ...
# [creates if myenv does not exist yet]
@@ -437,8 +425,8 @@ Developing Packages in a Spack Environment
The ``spack develop`` command allows one to develop Spack packages in
an environment. It requires a spec containing a concrete version, and
will configure Spack to install the package from local source.
If a version is not provided from the command line interface then spack
will configure Spack to install the package from local source.
If a version is not provided from the command line interface then spack
will automatically pick the highest version the package has defined.
This means any infinity versions (``develop``, ``main``, ``stable``) will be
preferred in this selection process.
@@ -448,9 +436,9 @@ set, and Spack will ensure the package and its dependents are rebuilt
any time the environment is installed if the package's local source
code has been modified. Spack's native implementation to check for modifications
is to check if ``mtime`` is newer than the installation.
A custom check can be created by overriding the ``detect_dev_src_change`` method
in your package class. This is particularly useful for projects using custom spack repo's
to drive development and want to optimize performance.
A custom check can be created by overriding the ``detect_dev_src_change`` method
in your package class. This is particularly useful for projects using custom spack repo's
to drive development and want to optimize performance.
Spack ensures that all instances of a
developed package in the environment are concretized to match the
@@ -466,7 +454,7 @@ Further development on ``foo`` can be tested by re-installing the environment,
and eventually committed and pushed to the upstream git repo.
If the package being developed supports out-of-source builds then users can use the
``--build_directory`` flag to control the location and name of the build directory.
``--build_directory`` flag to control the location and name of the build directory.
This is a shortcut to set the ``package_attributes:build_directory`` in the
``packages`` configuration (see :ref:`assigning-package-attributes`).
The supplied location will become the build-directory for that package in all future builds.

View File

@@ -1,4 +1,5 @@
.. Copyright Spack Project Developers. See COPYRIGHT file for details.
.. Copyright 2013-2024 Lawrence Livermore National Security, LLC and other
Spack Project Developers. See the top-level COPYRIGHT file for details.
SPDX-License-Identifier: (Apache-2.0 OR MIT)

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@@ -1,4 +1,5 @@
.. Copyright Spack Project Developers. See COPYRIGHT file for details.
.. Copyright 2013-2024 Lawrence Livermore National Security, LLC and other
Spack Project Developers. See the top-level COPYRIGHT file for details.
SPDX-License-Identifier: (Apache-2.0 OR MIT)

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@@ -1,4 +1,5 @@
.. Copyright Spack Project Developers. See COPYRIGHT file for details.
.. Copyright 2013-2024 Lawrence Livermore National Security, LLC and other
Spack Project Developers. See the top-level COPYRIGHT file for details.
SPDX-License-Identifier: (Apache-2.0 OR MIT)

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@@ -1,4 +1,5 @@
.. Copyright Spack Project Developers. See COPYRIGHT file for details.
.. Copyright 2013-2024 Lawrence Livermore National Security, LLC and other
Spack Project Developers. See the top-level COPYRIGHT file for details.
SPDX-License-Identifier: (Apache-2.0 OR MIT)
@@ -34,7 +35,7 @@ A build matrix showing which packages are working on which systems is shown belo
.. code-block:: console
apt update
apt install bzip2 ca-certificates g++ gcc gfortran git gzip lsb-release patch python3 tar unzip xz-utils zstd
apt install bzip2 ca-certificates file g++ gcc gfortran git gzip lsb-release patch python3 tar unzip xz-utils zstd
.. tab-item:: RHEL
@@ -147,22 +148,20 @@ The first time you concretize a spec, Spack will bootstrap automatically:
--------------------------------
zlib@1.2.13%gcc@9.4.0+optimize+pic+shared build_system=makefile arch=linux-ubuntu20.04-icelake
The default bootstrap behavior is to use pre-built binaries. You can verify the
active bootstrap repositories with:
.. command-output:: spack bootstrap list
If for security concerns you cannot bootstrap ``clingo`` from pre-built
binaries, you have to disable fetching the binaries we generated with Github Actions.
.. code-block:: console
$ spack bootstrap disable github-actions-v0.6
==> "github-actions-v0.6" is now disabled and will not be used for bootstrapping
$ spack bootstrap disable github-actions-v0.5
==> "github-actions-v0.5" is now disabled and will not be used for bootstrapping
$ spack bootstrap disable github-actions-v0.4
==> "github-actions-v0.4" is now disabled and will not be used for bootstrapping
$ spack bootstrap disable github-actions-v0.3
==> "github-actions-v0.3" is now disabled and will not be used for bootstrapping
You can verify that the new settings are effective with:
.. command-output:: spack bootstrap list
You can verify that the new settings are effective with ``spack bootstrap list``.
.. note::
@@ -1327,7 +1326,6 @@ Required:
* Microsoft Visual Studio
* Python
* Git
* 7z
Optional:
* Intel Fortran (needed for some packages)
@@ -1393,13 +1391,6 @@ as the project providing Git support on Windows. This is additionally the recomm
for installing Git on Windows, a link to which can be found above. Spack requires the
utilities vendored by this project.
"""
7zip
"""
A tool for extracting ``.xz`` files is required for extracting source tarballs. The latest 7zip
can be located at https://sourceforge.net/projects/sevenzip/.
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
Step 2: Install and setup Spack
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^

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@@ -1,4 +1,5 @@
.. Copyright Spack Project Developers. See COPYRIGHT file for details.
.. Copyright 2013-2024 Lawrence Livermore National Security, LLC and other
Spack Project Developers. See the top-level COPYRIGHT file for details.
SPDX-License-Identifier: (Apache-2.0 OR MIT)

View File

@@ -1,4 +1,5 @@
.. Copyright Spack Project Developers. See COPYRIGHT file for details.
.. Copyright 2013-2024 Lawrence Livermore National Security, LLC and other
Spack Project Developers. See the top-level COPYRIGHT file for details.
SPDX-License-Identifier: (Apache-2.0 OR MIT)

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@@ -1,4 +1,5 @@
.. Copyright Spack Project Developers. See COPYRIGHT file for details.
.. Copyright 2013-2024 Lawrence Livermore National Security, LLC and other
Spack Project Developers. See the top-level COPYRIGHT file for details.
SPDX-License-Identifier: (Apache-2.0 OR MIT)

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@@ -1,4 +1,5 @@
.. Copyright Spack Project Developers. See COPYRIGHT file for details.
.. Copyright 2013-2024 Lawrence Livermore National Security, LLC and other
Spack Project Developers. See the top-level COPYRIGHT file for details.
SPDX-License-Identifier: (Apache-2.0 OR MIT)
@@ -456,13 +457,14 @@ For instance, the following config options,
tcl:
all:
suffixes:
^python@3: 'python{^python.version.up_to_2}'
^python@3: 'python{^python.version}'
^openblas: 'openblas'
will add a ``python3.12`` to module names of packages compiled with Python 3.12, and similarly for
all specs depending on ``python@3``. This is useful to know which version of Python a set of Python
extensions is associated with. Likewise, the ``openblas`` string is attached to any program that
has openblas in the spec, most likely via the ``+blas`` variant specification.
will add a ``python-3.12.1`` version string to any packages compiled with
Python matching the spec, ``python@3``. This is useful to know which
version of Python a set of Python extensions is associated with. Likewise, the
``openblas`` string is attached to any program that has openblas in the spec,
most likely via the ``+blas`` variant specification.
The most heavyweight solution to module naming is to change the entire
naming convention for module files. This uses the projections format

View File

@@ -1,4 +1,5 @@
.. Copyright Spack Project Developers. See COPYRIGHT file for details.
.. Copyright 2013-2024 Lawrence Livermore National Security, LLC and other
Spack Project Developers. See the top-level COPYRIGHT file for details.
SPDX-License-Identifier: (Apache-2.0 OR MIT)

View File

@@ -1,4 +1,5 @@
.. Copyright Spack Project Developers. See COPYRIGHT file for details.
.. Copyright 2013-2024 Lawrence Livermore National Security, LLC and other
Spack Project Developers. See the top-level COPYRIGHT file for details.
SPDX-License-Identifier: (Apache-2.0 OR MIT)
@@ -236,7 +237,8 @@ for details):
.. code-block:: python
:linenos:
# Copyright Spack Project Developers. See COPYRIGHT file for details.
# Copyright 2013-2024 Lawrence Livermore National Security, LLC and other
# Spack Project Developers. See the top-level COPYRIGHT file for details.
#
# SPDX-License-Identifier: (Apache-2.0 OR MIT)
@@ -4898,15 +4900,15 @@ If your package has a virtual dependency like ``mpi``, then referring to
``spec["mpi"]`` within ``install()`` will get you the concrete ``mpi``
implementation in your dependency DAG. That is a spec object just like
the one passed to install, only the MPI implementations all set some
additional properties on it to help you out. E.g., in openmpi, you'll
additional properties on it to help you out. E.g., in mvapich2, you'll
find this:
.. literalinclude:: _spack_root/var/spack/repos/builtin/packages/openmpi/package.py
:pyobject: Openmpi.setup_dependent_package
.. literalinclude:: _spack_root/var/spack/repos/builtin/packages/mvapich2/package.py
:pyobject: Mvapich2.setup_dependent_package
That code allows the ``openmpi`` package to associate an ``mpicc`` property
with the ``openmpi`` node in the DAG, so that dependents can access it.
``mvapich2`` and ``mpich`` do similar things. So, no matter what MPI
That code allows the mvapich2 package to associate an ``mpicc`` property
with the ``mvapich2`` node in the DAG, so that dependents can access it.
``openmpi`` and ``mpich`` do similar things. So, no matter what MPI
you're using, spec["mpi"].mpicc gets you the location of the MPI
compilers. This allows us to have a fairly simple polymorphic interface
for information about virtual dependencies like MPI.
@@ -5135,7 +5137,7 @@ other checks.
- Not applicable
* - :ref:`PythonPackage <pythonpackage>`
- Not applicable
- ``test_imports`` (module imports)
- ``test`` (module imports)
* - :ref:`QMakePackage <qmakepackage>`
- ``check`` (``make check``)
- Not applicable
@@ -5144,7 +5146,7 @@ other checks.
- Not applicable
* - :ref:`SIPPackage <sippackage>`
- Not applicable
- ``test_imports`` (module imports)
- ``test`` (module imports)
* - :ref:`WafPackage <wafpackage>`
- ``build_test`` (must be overridden)
- ``install_test`` (must be overridden)

View File

@@ -1,4 +1,5 @@
.. Copyright Spack Project Developers. See COPYRIGHT file for details.
.. Copyright 2013-2024 Lawrence Livermore National Security, LLC and other
Spack Project Developers. See the top-level COPYRIGHT file for details.
SPDX-License-Identifier: (Apache-2.0 OR MIT)

View File

@@ -1,4 +1,5 @@
.. Copyright Spack Project Developers. See COPYRIGHT file for details.
.. Copyright 2013-2024 Lawrence Livermore National Security, LLC and other
Spack Project Developers. See the top-level COPYRIGHT file for details.
SPDX-License-Identifier: (Apache-2.0 OR MIT)

View File

@@ -1,4 +1,5 @@
.. Copyright Spack Project Developers. See COPYRIGHT file for details.
.. Copyright 2013-2024 Lawrence Livermore National Security, LLC and other
Spack Project Developers. See the top-level COPYRIGHT file for details.
SPDX-License-Identifier: (Apache-2.0 OR MIT)

View File

@@ -1,12 +1,12 @@
sphinx==8.1.3
sphinxcontrib-programoutput==0.18
sphinxcontrib-programoutput==0.17
sphinx_design==0.6.1
sphinx-rtd-theme==3.0.2
python-levenshtein==0.26.1
docutils==0.21.2
pygments==2.19.1
urllib3==2.3.0
pytest==8.3.4
pygments==2.18.0
urllib3==2.2.3
pytest==8.3.3
isort==5.13.2
black==24.10.0
flake8==7.1.1

View File

@@ -1,4 +1,5 @@
.. Copyright Spack Project Developers. See COPYRIGHT file for details.
.. Copyright 2013-2024 Lawrence Livermore National Security, LLC and other
Spack Project Developers. See the top-level COPYRIGHT file for details.
SPDX-License-Identifier: (Apache-2.0 OR MIT)

View File

@@ -1,4 +1,5 @@
# Copyright Spack Project Developers. See COPYRIGHT file for details.
# Copyright 2013-2024 Lawrence Livermore National Security, LLC and other
# Spack Project Developers. See the top-level COPYRIGHT file for details.
#
# SPDX-License-Identifier: (Apache-2.0 OR MIT)

View File

@@ -8,6 +8,7 @@ unzip, , , Compress/Decompress archives
bzip2, , , Compress/Decompress archives
xz, , , Compress/Decompress archives
zstd, , Optional, Compress/Decompress archives
file, , , Create/Use Buildcaches
lsb-release, , , Linux: identify operating system version
gnupg2, , , Sign/Verify Buildcaches
git, , , Manage Software Repositories
1 Name Supported Versions Notes Requirement Reason
8 bzip2 Compress/Decompress archives
9 xz Compress/Decompress archives
10 zstd Optional Compress/Decompress archives
11 file Create/Use Buildcaches
12 lsb-release Linux: identify operating system version
13 gnupg2 Sign/Verify Buildcaches
14 git Manage Software Repositories

18
lib/spack/env/cc vendored
View File

@@ -1,7 +1,8 @@
#!/bin/sh -f
# shellcheck disable=SC2034 # evals in this script fool shellcheck
#
# Copyright Spack Project Developers. See COPYRIGHT file for details.
# Copyright 2013-2024 Lawrence Livermore National Security, LLC and other
# Spack Project Developers. See the top-level COPYRIGHT file for details.
#
# SPDX-License-Identifier: (Apache-2.0 OR MIT)
@@ -40,10 +41,6 @@ SPACK_ENV_PATH
SPACK_DEBUG_LOG_DIR
SPACK_DEBUG_LOG_ID
SPACK_COMPILER_SPEC
SPACK_CC_RPATH_ARG
SPACK_CXX_RPATH_ARG
SPACK_F77_RPATH_ARG
SPACK_FC_RPATH_ARG
SPACK_LINKER_ARG
SPACK_SHORT_SPEC
SPACK_SYSTEM_DIRS
@@ -222,6 +219,7 @@ for param in $params; do
if eval "test -z \"\${${param}:-}\""; then
die "Spack compiler must be run from Spack! Input '$param' is missing."
fi
# FIXME (compiler as nodes) add checks on whether `SPACK_XX_RPATH` is set if `SPACK_XX` is set
done
# eval this because SPACK_MANAGED_DIRS and SPACK_SYSTEM_DIRS are inputs we don't wanna loop over.
@@ -402,7 +400,7 @@ dtags_to_strip="${SPACK_DTAGS_TO_STRIP}"
linker_arg="${SPACK_LINKER_ARG}"
# Set up rpath variable according to language.
rpath="ERROR: RPATH ARG WAS NOT SET"
rpath="ERROR: RPATH ARG WAS NOT SET, MAYBE THE PACKAGE DOES NOT DEPEND ON ${comp}?"
eval "rpath=\${SPACK_${comp}_RPATH_ARG:?${rpath}}"
# Dump the mode and exit if the command is dump-mode.
@@ -787,15 +785,17 @@ case "$mode" in
C)
extend spack_flags_list SPACK_ALWAYS_CFLAGS
extend spack_flags_list SPACK_CFLAGS
preextend flags_list SPACK_TARGET_ARGS_CC
;;
CXX)
extend spack_flags_list SPACK_ALWAYS_CXXFLAGS
extend spack_flags_list SPACK_CXXFLAGS
preextend flags_list SPACK_TARGET_ARGS_CXX
;;
F)
preextend flags_list SPACK_TARGET_ARGS_FORTRAN
;;
esac
# prepend target args
preextend flags_list SPACK_TARGET_ARGS
;;
esac

View File

@@ -1,4 +1,5 @@
# Copyright Spack Project Developers. See COPYRIGHT file for details.
# Copyright 2013-2024 Lawrence Livermore National Security, LLC and other
# Spack Project Developers. See the top-level COPYRIGHT file for details.
#
# SPDX-License-Identifier: (Apache-2.0 OR MIT)

View File

@@ -1,254 +0,0 @@
A. HISTORY OF THE SOFTWARE
==========================
Python was created in the early 1990s by Guido van Rossum at Stichting
Mathematisch Centrum (CWI, see http://www.cwi.nl) in the Netherlands
as a successor of a language called ABC. Guido remains Python's
principal author, although it includes many contributions from others.
In 1995, Guido continued his work on Python at the Corporation for
National Research Initiatives (CNRI, see http://www.cnri.reston.va.us)
in Reston, Virginia where he released several versions of the
software.
In May 2000, Guido and the Python core development team moved to
BeOpen.com to form the BeOpen PythonLabs team. In October of the same
year, the PythonLabs team moved to Digital Creations (now Zope
Corporation, see http://www.zope.com). In 2001, the Python Software
Foundation (PSF, see http://www.python.org/psf/) was formed, a
non-profit organization created specifically to own Python-related
Intellectual Property. Zope Corporation is a sponsoring member of
the PSF.
All Python releases are Open Source (see http://www.opensource.org for
the Open Source Definition). Historically, most, but not all, Python
releases have also been GPL-compatible; the table below summarizes
the various releases.
Release Derived Year Owner GPL-
from compatible? (1)
0.9.0 thru 1.2 1991-1995 CWI yes
1.3 thru 1.5.2 1.2 1995-1999 CNRI yes
1.6 1.5.2 2000 CNRI no
2.0 1.6 2000 BeOpen.com no
1.6.1 1.6 2001 CNRI yes (2)
2.1 2.0+1.6.1 2001 PSF no
2.0.1 2.0+1.6.1 2001 PSF yes
2.1.1 2.1+2.0.1 2001 PSF yes
2.1.2 2.1.1 2002 PSF yes
2.1.3 2.1.2 2002 PSF yes
2.2 and above 2.1.1 2001-now PSF yes
Footnotes:
(1) GPL-compatible doesn't mean that we're distributing Python under
the GPL. All Python licenses, unlike the GPL, let you distribute
a modified version without making your changes open source. The
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(2) According to Richard Stallman, 1.6.1 is not GPL-compatible,
because its license has a choice of law clause. According to
CNRI, however, Stallman's lawyer has told CNRI's lawyer that 1.6.1
is "not incompatible" with the GPL.
Thanks to the many outside volunteers who have worked under Guido's
direction to make these releases possible.
B. TERMS AND CONDITIONS FOR ACCESSING OR OTHERWISE USING PYTHON
===============================================================
PYTHON SOFTWARE FOUNDATION LICENSE VERSION 2
--------------------------------------------
1. This LICENSE AGREEMENT is between the Python Software Foundation
("PSF"), and the Individual or Organization ("Licensee") accessing and
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its associated documentation.
2. Subject to the terms and conditions of this License Agreement, PSF hereby
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DISCLAIMS ANY REPRESENTATION OR WARRANTY OF MERCHANTABILITY OR FITNESS
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INFRINGE ANY THIRD PARTY RIGHTS.
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FOR ANY INCIDENTAL, SPECIAL, OR CONSEQUENTIAL DAMAGES OR LOSS AS
A RESULT OF MODIFYING, DISTRIBUTING, OR OTHERWISE USING PYTHON,
OR ANY DERIVATIVE THEREOF, EVEN IF ADVISED OF THE POSSIBILITY THEREOF.
6. This License Agreement will automatically terminate upon a material
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8. By copying, installing or otherwise using Python, Licensee
agrees to be bound by the terms and conditions of this License
Agreement.
BEOPEN.COM LICENSE AGREEMENT FOR PYTHON 2.0
-------------------------------------------
BEOPEN PYTHON OPEN SOURCE LICENSE AGREEMENT VERSION 1
1. This LICENSE AGREEMENT is between BeOpen.com ("BeOpen"), having an
office at 160 Saratoga Avenue, Santa Clara, CA 95051, and the
Individual or Organization ("Licensee") accessing and otherwise using
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2. Subject to the terms and conditions of this BeOpen Python License
Agreement, BeOpen hereby grants Licensee a non-exclusive,
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otherwise use the Software alone or in any derivative version,
provided, however, that the BeOpen Python License is retained in the
Software, alone or in any derivative version prepared by Licensee.
3. BeOpen is making the Software available to Licensee on an "AS IS"
basis. BEOPEN MAKES NO REPRESENTATIONS OR WARRANTIES, EXPRESS OR
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4. BEOPEN SHALL NOT BE LIABLE TO LICENSEE OR ANY OTHER USERS OF THE
SOFTWARE FOR ANY INCIDENTAL, SPECIAL, OR CONSEQUENTIAL DAMAGES OR LOSS
AS A RESULT OF USING, MODIFYING OR DISTRIBUTING THE SOFTWARE, OR ANY
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5. This License Agreement will automatically terminate upon a material
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CNRI LICENSE AGREEMENT FOR PYTHON 1.6.1
---------------------------------------
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Research Initiatives, having an office at 1895 Preston White Drive,
Reston, VA 20191 ("CNRI"), and the Individual or Organization
("Licensee") accessing and otherwise using Python 1.6.1 software in
source or binary form and its associated documentation.
2. Subject to the terms and conditions of this License Agreement, CNRI
hereby grants Licensee a nonexclusive, royalty-free, world-wide
license to reproduce, analyze, test, perform and/or display publicly,
prepare derivative works, distribute, and otherwise use Python 1.6.1
alone or in any derivative version, provided, however, that CNRI's
License Agreement and CNRI's notice of copyright, i.e., "Copyright (c)
1995-2001 Corporation for National Research Initiatives; All Rights
Reserved" are retained in Python 1.6.1 alone or in any derivative
version prepared by Licensee. Alternately, in lieu of CNRI's License
Agreement, Licensee may substitute the following text (omitting the
quotes): "Python 1.6.1 is made available subject to the terms and
conditions in CNRI's License Agreement. This Agreement together with
Python 1.6.1 may be located on the Internet using the following
unique, persistent identifier (known as a handle): 1895.22/1013. This
Agreement may also be obtained from a proxy server on the Internet
using the following URL: http://hdl.handle.net/1895.22/1013".
3. In the event Licensee prepares a derivative work that is based on
or incorporates Python 1.6.1 or any part thereof, and wants to make
the derivative work available to others as provided herein, then
Licensee hereby agrees to include in any such work a brief summary of
the changes made to Python 1.6.1.
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IMPLIED. BY WAY OF EXAMPLE, BUT NOT LIMITATION, CNRI MAKES NO AND
DISCLAIMS ANY REPRESENTATION OR WARRANTY OF MERCHANTABILITY OR FITNESS
FOR ANY PARTICULAR PURPOSE OR THAT THE USE OF PYTHON 1.6.1 WILL NOT
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1.6.1 FOR ANY INCIDENTAL, SPECIAL, OR CONSEQUENTIAL DAMAGES OR LOSS AS
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ACCEPT
CWI LICENSE AGREEMENT FOR PYTHON 0.9.0 THROUGH 1.2
--------------------------------------------------
Copyright (c) 1991 - 1995, Stichting Mathematisch Centrum Amsterdam,
The Netherlands. All rights reserved.
Permission to use, copy, modify, and distribute this software and its
documentation for any purpose and without fee is hereby granted,
provided that the above copyright notice appear in all copies and that
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File diff suppressed because it is too large Load Diff

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@@ -1 +0,0 @@
from typing_extensions import *

View File

@@ -8,4 +8,3 @@ six==1.16.0
macholib==1.16.2
altgraph==0.17.3
ruamel.yaml==0.17.21
typing_extensions==4.1.1

View File

@@ -1,3 +1,4 @@
# Copyright Spack Project Developers. See COPYRIGHT file for details.
# Copyright 2013-2024 Lawrence Livermore National Security, LLC and other
# Spack Project Developers. See the top-level COPYRIGHT file for details.
#
# SPDX-License-Identifier: (Apache-2.0 OR MIT)

View File

@@ -1,4 +1,5 @@
# Copyright Spack Project Developers. See COPYRIGHT file for details.
# Copyright 2013-2024 Lawrence Livermore National Security, LLC and other
# Spack Project Developers. See the top-level COPYRIGHT file for details.
#
# SPDX-License-Identifier: (Apache-2.0 OR MIT)
"""Path primitives that just require Python standard library."""
@@ -65,7 +66,7 @@ def _is_url(path_or_url: str) -> bool:
return result
def _system_path_filter(_func=None, arg_slice: Optional[slice] = None):
def system_path_filter(_func=None, arg_slice: Optional[slice] = None):
"""Filters function arguments to account for platform path separators.
Optional slicing range can be specified to select specific arguments
@@ -99,16 +100,6 @@ def path_filter_caller(*args, **kwargs):
return holder_func
def _noop_decorator(_func=None, arg_slice: Optional[slice] = None):
return _func if _func else lambda x: x
if sys.platform == "win32":
system_path_filter = _system_path_filter
else:
system_path_filter = _noop_decorator
def sanitize_win_longpath(path: str) -> str:
"""Strip Windows extended path prefix from strings
Returns sanitized string.

View File

@@ -1,4 +1,5 @@
# Copyright Spack Project Developers. See COPYRIGHT file for details.
# Copyright 2013-2024 Lawrence Livermore National Security, LLC and other
# Spack Project Developers. See the top-level COPYRIGHT file for details.
#
# SPDX-License-Identifier: (Apache-2.0 OR MIT)
"""String manipulation functions that do not have other dependencies than Python

View File

@@ -1,9 +1,10 @@
# Copyright Spack Project Developers. See COPYRIGHT file for details.
# Copyright 2013-2024 Lawrence Livermore National Security, LLC and other
# Spack Project Developers. See the top-level COPYRIGHT file for details.
#
# SPDX-License-Identifier: (Apache-2.0 OR MIT)
"""URL primitives that just require Python standard library."""
import itertools
import os
import os.path
import re
from typing import Optional, Set, Tuple
from urllib.parse import urlsplit, urlunsplit

View File

@@ -1,3 +1,4 @@
# Copyright Spack Project Developers. See COPYRIGHT file for details.
# Copyright 2013-2024 Lawrence Livermore National Security, LLC and other
# Spack Project Developers. See the top-level COPYRIGHT file for details.
#
# SPDX-License-Identifier: (Apache-2.0 OR MIT)

View File

@@ -1,4 +1,5 @@
# Copyright Spack Project Developers. See COPYRIGHT file for details.
# Copyright 2013-2024 Lawrence Livermore National Security, LLC and other
# Spack Project Developers. See the top-level COPYRIGHT file for details.
#
# SPDX-License-Identifier: (Apache-2.0 OR MIT)

View File

@@ -1,4 +1,5 @@
# Copyright Spack Project Developers. See COPYRIGHT file for details.
# Copyright 2013-2024 Lawrence Livermore National Security, LLC and other
# Spack Project Developers. See the top-level COPYRIGHT file for details.
#
# SPDX-License-Identifier: (Apache-2.0 OR MIT)
import collections
@@ -23,7 +24,6 @@
Callable,
Deque,
Dict,
Generator,
Iterable,
List,
Match,
@@ -75,6 +75,7 @@
"install_tree",
"is_exe",
"join_path",
"last_modification_time_recursive",
"library_extensions",
"mkdirp",
"partition_path",
@@ -299,32 +300,35 @@ def filter_file(
ignore_absent: bool = False,
start_at: Optional[str] = None,
stop_at: Optional[str] = None,
encoding: Optional[str] = "utf-8",
) -> None:
r"""Like sed, but uses python regular expressions.
Filters every line of each file through regex and replaces the file with a filtered version.
Preserves mode of filtered files.
Filters every line of each file through regex and replaces the file
with a filtered version. Preserves mode of filtered files.
As with re.sub, ``repl`` can be either a string or a callable. If it is a callable, it is
passed the match object and should return a suitable replacement string. If it is a string, it
can contain ``\1``, ``\2``, etc. to represent back-substitution as sed would allow.
As with re.sub, ``repl`` can be either a string or a callable.
If it is a callable, it is passed the match object and should
return a suitable replacement string. If it is a string, it
can contain ``\1``, ``\2``, etc. to represent back-substitution
as sed would allow.
Args:
regex: The regular expression to search for
repl: The string to replace matches with
*filenames: One or more files to search and replace string: Treat regex as a plain string.
Default it False backup: Make backup file(s) suffixed with ``~``. Default is False
ignore_absent: Ignore any files that don't exist. Default is False
start_at: Marker used to start applying the replacements. If a text line matches this
marker filtering is started at the next line. All contents before the marker and the
marker itself are copied verbatim. Default is to start filtering from the first line of
the file.
stop_at: Marker used to stop scanning the file further. If a text line matches this marker
filtering is stopped and the rest of the file is copied verbatim. Default is to filter
until the end of the file.
encoding: The encoding to use when reading and writing the files. Default is None, which
uses the system's default encoding.
regex (str): The regular expression to search for
repl (str): The string to replace matches with
*filenames: One or more files to search and replace
string (bool): Treat regex as a plain string. Default it False
backup (bool): Make backup file(s) suffixed with ``~``. Default is False
ignore_absent (bool): Ignore any files that don't exist.
Default is False
start_at (str): Marker used to start applying the replacements. If a
text line matches this marker filtering is started at the next line.
All contents before the marker and the marker itself are copied
verbatim. Default is to start filtering from the first line of the
file.
stop_at (str): Marker used to stop scanning the file further. If a text
line matches this marker filtering is stopped and the rest of the
file is copied verbatim. Default is to filter until the end of the
file.
"""
# Allow strings to use \1, \2, etc. for replacement, like sed
if not callable(repl):
@@ -340,56 +344,72 @@ def groupid_to_group(x):
if string:
regex = re.escape(regex)
regex_compiled = re.compile(regex)
for path in path_to_os_path(*filenames):
if ignore_absent and not os.path.exists(path):
tty.debug(f'FILTER FILE: file "{path}" not found. Skipping to next file.')
for filename in path_to_os_path(*filenames):
msg = 'FILTER FILE: {0} [replacing "{1}"]'
tty.debug(msg.format(filename, regex))
backup_filename = filename + "~"
tmp_filename = filename + ".spack~"
if ignore_absent and not os.path.exists(filename):
msg = 'FILTER FILE: file "{0}" not found. Skipping to next file.'
tty.debug(msg.format(filename))
continue
else:
tty.debug(f'FILTER FILE: {path} [replacing "{regex}"]')
fd, temp_path = tempfile.mkstemp(
prefix=f"{os.path.basename(path)}.", dir=os.path.dirname(path)
)
os.close(fd)
# Create backup file. Don't overwrite an existing backup
# file in case this file is being filtered multiple times.
if not os.path.exists(backup_filename):
shutil.copy(filename, backup_filename)
shutil.copy(path, temp_path)
errored = False
# Create a temporary file to read from. We cannot use backup_filename
# in case filter_file is invoked multiple times on the same file.
shutil.copy(filename, tmp_filename)
try:
# Open as a text file and filter until the end of the file is reached, or we found a
# marker in the line if it was specified. To avoid translating line endings (\n to
# \r\n and vice-versa) use newline="".
with open(
temp_path, mode="r", errors="surrogateescape", newline="", encoding=encoding
) as input_file, open(
path, mode="w", errors="surrogateescape", newline="", encoding=encoding
) as output_file:
if start_at is None and stop_at is None: # common case, avoids branching in loop
for line in input_file:
output_file.write(re.sub(regex_compiled, repl, line))
else:
# state is -1 before start_at; 0 between; 1 after stop_at
state = 0 if start_at is None else -1
for line in input_file:
if state == 0:
# Open as a text file and filter until the end of the file is
# reached, or we found a marker in the line if it was specified
#
# To avoid translating line endings (\n to \r\n and vice-versa)
# we force os.open to ignore translations and use the line endings
# the file comes with
with open(tmp_filename, mode="r", errors="surrogateescape", newline="") as input_file:
with open(filename, mode="w", errors="surrogateescape", newline="") as output_file:
do_filtering = start_at is None
# Using iter and readline is a workaround needed not to
# disable input_file.tell(), which will happen if we call
# input_file.next() implicitly via the for loop
for line in iter(input_file.readline, ""):
if stop_at is not None:
current_position = input_file.tell()
if stop_at == line.strip():
state = 1
else:
line = re.sub(regex_compiled, repl, line)
elif state == -1 and start_at == line.strip():
state = 0
output_file.write(line)
output_file.write(line)
break
if do_filtering:
filtered_line = re.sub(regex, repl, line)
output_file.write(filtered_line)
else:
do_filtering = start_at == line.strip()
output_file.write(line)
else:
current_position = None
# If we stopped filtering at some point, reopen the file in
# binary mode and copy verbatim the remaining part
if current_position and stop_at:
with open(tmp_filename, mode="rb") as input_binary_buffer:
input_binary_buffer.seek(current_position)
with open(filename, mode="ab") as output_binary_buffer:
output_binary_buffer.writelines(input_binary_buffer.readlines())
except BaseException:
# restore the original file
os.rename(temp_path, path)
errored = True
# clean up the original file on failure.
shutil.move(backup_filename, filename)
raise
finally:
if not errored and not backup:
os.unlink(temp_path)
os.remove(tmp_filename)
if not backup and os.path.exists(backup_filename):
os.remove(backup_filename)
class FileFilter:
@@ -668,7 +688,7 @@ def copy(src, dest, _permissions=False):
_permissions (bool): for internal use only
Raises:
OSError: if *src* does not match any files or directories
IOError: if *src* does not match any files or directories
ValueError: if *src* matches multiple files but *dest* is
not a directory
"""
@@ -679,7 +699,7 @@ def copy(src, dest, _permissions=False):
files = glob.glob(src)
if not files:
raise OSError("No such file or directory: '{0}'".format(src))
raise IOError("No such file or directory: '{0}'".format(src))
if len(files) > 1 and not os.path.isdir(dest):
raise ValueError(
"'{0}' matches multiple files but '{1}' is not a directory".format(src, dest)
@@ -710,7 +730,7 @@ def install(src, dest):
dest (str): the destination file or directory
Raises:
OSError: if *src* does not match any files or directories
IOError: if *src* does not match any files or directories
ValueError: if *src* matches multiple files but *dest* is
not a directory
"""
@@ -748,7 +768,7 @@ def copy_tree(
_permissions (bool): for internal use only
Raises:
OSError: if *src* does not match any files or directories
IOError: if *src* does not match any files or directories
ValueError: if *src* is a parent directory of *dest*
"""
if _permissions:
@@ -762,7 +782,7 @@ def copy_tree(
files = glob.glob(src)
if not files:
raise OSError("No such file or directory: '{0}'".format(src))
raise IOError("No such file or directory: '{0}'".format(src))
# For Windows hard-links and junctions, the source path must exist to make a symlink. Add
# all symlinks to this list while traversing the tree, then when finished, make all
@@ -843,7 +863,7 @@ def install_tree(src, dest, symlinks=True, ignore=None):
ignore (typing.Callable): function indicating which files to ignore
Raises:
OSError: if *src* does not match any files or directories
IOError: if *src* does not match any files or directories
ValueError: if *src* is a parent directory of *dest*
"""
copy_tree(src, dest, symlinks=symlinks, ignore=ignore, _permissions=True)
@@ -1094,12 +1114,12 @@ def hash_directory(directory, ignore=[]):
@contextmanager
@system_path_filter
def write_tmp_and_move(filename: str, *, encoding: Optional[str] = None):
def write_tmp_and_move(filename):
"""Write to a temporary file, then move into place."""
dirname = os.path.dirname(filename)
basename = os.path.basename(filename)
tmp = os.path.join(dirname, ".%s.tmp" % basename)
with open(tmp, "w", encoding=encoding) as f:
with open(tmp, "w") as f:
yield f
shutil.move(tmp, filename)
@@ -1469,36 +1489,15 @@ def set_executable(path):
@system_path_filter
def recursive_mtime_greater_than(path: str, time: float) -> bool:
"""Returns true if any file or dir recursively under `path` has mtime greater than `time`."""
# use bfs order to increase likelihood of early return
queue: Deque[str] = collections.deque([path])
if os.stat(path).st_mtime > time:
return True
while queue:
current = queue.popleft()
try:
entries = os.scandir(current)
except OSError:
continue
with entries:
for entry in entries:
try:
st = entry.stat(follow_symlinks=False)
except OSError:
continue
if st.st_mtime > time:
return True
if entry.is_dir(follow_symlinks=False):
queue.append(entry.path)
return False
def last_modification_time_recursive(path):
path = os.path.abspath(path)
times = [os.stat(path).st_mtime]
times.extend(
os.lstat(os.path.join(root, name)).st_mtime
for root, dirs, files in os.walk(path)
for name in dirs + files
)
return max(times)
@system_path_filter
@@ -1760,7 +1759,8 @@ def find(
def _log_file_access_issue(e: OSError, path: str) -> None:
tty.debug(f"find must skip {path}: {e}")
errno_name = errno.errorcode.get(e.errno, "UNKNOWN")
tty.debug(f"find must skip {path}: {errno_name} {e}")
def _file_id(s: os.stat_result) -> Tuple[int, int]:
@@ -2772,6 +2772,22 @@ def prefixes(path):
return paths
@system_path_filter
def md5sum(file):
"""Compute the MD5 sum of a file.
Args:
file (str): file to be checksummed
Returns:
MD5 sum of the file's content
"""
md5 = hashlib.md5()
with open(file, "rb") as f:
md5.update(f.read())
return md5.digest()
@system_path_filter
def remove_directory_contents(dir):
"""Remove all contents of a directory."""
@@ -2822,25 +2838,6 @@ def temporary_dir(
remove_directory_contents(tmp_dir)
@contextmanager
def edit_in_place_through_temporary_file(file_path: str) -> Generator[str, None, None]:
"""Context manager for modifying ``file_path`` in place, preserving its inode and hardlinks,
for functions or external tools that do not support in-place editing. Notice that this function
is unsafe in that it works with paths instead of a file descriptors, but this is by design,
since we assume the call site will create a new inode at the same path."""
tmp_fd, tmp_path = tempfile.mkstemp(
dir=os.path.dirname(file_path), prefix=f"{os.path.basename(file_path)}."
)
# windows cannot replace a file with open fds, so close since the call site needs to replace.
os.close(tmp_fd)
try:
shutil.copyfile(file_path, tmp_path, follow_symlinks=True)
yield tmp_path
shutil.copyfile(tmp_path, file_path, follow_symlinks=True)
finally:
os.unlink(tmp_path)
def filesummary(path, print_bytes=16) -> Tuple[int, bytes]:
"""Create a small summary of the given file. Does not error
when file does not exist.

View File

@@ -1,4 +1,5 @@
# Copyright Spack Project Developers. See COPYRIGHT file for details.
# Copyright 2013-2024 Lawrence Livermore National Security, LLC and other
# Spack Project Developers. See the top-level COPYRIGHT file for details.
#
# SPDX-License-Identifier: (Apache-2.0 OR MIT)
@@ -72,7 +73,7 @@ def index_by(objects, *funcs):
if isinstance(f, str):
f = lambda x: getattr(x, funcs[0])
elif isinstance(f, tuple):
f = lambda x: tuple(getattr(x, p) for p in funcs[0])
f = lambda x: tuple(getattr(x, p, None) for p in funcs[0])
result = {}
for o in objects:
@@ -862,10 +863,8 @@ def elide_list(line_list: List[str], max_num: int = 10) -> List[str]:
if sys.version_info >= (3, 9):
PatternStr = re.Pattern[str]
PatternBytes = re.Pattern[bytes]
else:
PatternStr = typing.Pattern[str]
PatternBytes = typing.Pattern[bytes]
def fnmatch_translate_multiple(named_patterns: Dict[str, str]) -> str:
@@ -996,11 +995,8 @@ def _receive_forwarded(self, context: str, exc: Exception, tb: List[str]):
def grouped_message(self, with_tracebacks: bool = True) -> str:
"""Print out an error message coalescing all the forwarded errors."""
each_exception_message = [
"{0} raised {1}: {2}{3}".format(
context,
exc.__class__.__name__,
exc,
"\n{0}".format("".join(tb)) if with_tracebacks else "",
"\n\t{0} raised {1}: {2}\n{3}".format(
context, exc.__class__.__name__, exc, f"\n{''.join(tb)}" if with_tracebacks else ""
)
for context, exc, tb in self.exceptions
]

View File

@@ -1,4 +1,5 @@
# Copyright Spack Project Developers. See COPYRIGHT file for details.
# Copyright 2013-2024 Lawrence Livermore National Security, LLC and other
# Spack Project Developers. See the top-level COPYRIGHT file for details.
#
# SPDX-License-Identifier: (Apache-2.0 OR MIT)
@@ -308,7 +309,7 @@ class LinkTree:
def __init__(self, source_root):
if not os.path.exists(source_root):
raise OSError("No such file or directory: '%s'", source_root)
raise IOError("No such file or directory: '%s'", source_root)
self._root = source_root

View File

@@ -1,4 +1,5 @@
# Copyright Spack Project Developers. See COPYRIGHT file for details.
# Copyright 2013-2024 Lawrence Livermore National Security, LLC and other
# Spack Project Developers. See the top-level COPYRIGHT file for details.
#
# SPDX-License-Identifier: (Apache-2.0 OR MIT)
@@ -95,8 +96,8 @@ def get_fh(self, path: str) -> IO:
Arguments:
path: path to lock file we want a filehandle for
"""
# Open writable files as rb+ so we can upgrade to write later
os_mode, fh_mode = (os.O_RDWR | os.O_CREAT), "rb+"
# Open writable files as 'r+' so we can upgrade to write later
os_mode, fh_mode = (os.O_RDWR | os.O_CREAT), "r+"
pid = os.getpid()
open_file = None # OpenFile object, if there is one
@@ -123,7 +124,7 @@ def get_fh(self, path: str) -> IO:
# we know path exists but not if it's writable. If it's read-only,
# only open the file for reading (and fail if we're trying to get
# an exclusive (write) lock on it)
os_mode, fh_mode = os.O_RDONLY, "rb"
os_mode, fh_mode = os.O_RDONLY, "r"
fd = os.open(path, os_mode)
fh = os.fdopen(fd, fh_mode)
@@ -242,7 +243,7 @@ def __init__(
helpful for distinguishing between different Spack locks.
"""
self.path = path
self._file: Optional[IO[bytes]] = None
self._file: Optional[IO] = None
self._reads = 0
self._writes = 0
@@ -328,9 +329,9 @@ def _lock(self, op: int, timeout: Optional[float] = None) -> Tuple[float, int]:
self._ensure_parent_directory()
self._file = FILE_TRACKER.get_fh(self.path)
if LockType.to_module(op) == fcntl.LOCK_EX and self._file.mode == "rb":
if LockType.to_module(op) == fcntl.LOCK_EX and self._file.mode == "r":
# Attempt to upgrade to write lock w/a read-only file.
# If the file were writable, we'd have opened it rb+
# If the file were writable, we'd have opened it 'r+'
raise LockROFileError(self.path)
self._log_debug(
@@ -391,7 +392,7 @@ def _poll_lock(self, op: int) -> bool:
return True
except OSError as e:
except IOError as e:
# EAGAIN and EACCES == locked by another process (so try again)
if e.errno not in (errno.EAGAIN, errno.EACCES):
raise
@@ -425,7 +426,7 @@ def _read_log_debug_data(self) -> None:
line = self._file.read()
if line:
pid, host = line.decode("utf-8").strip().split(",")
pid, host = line.strip().split(",")
_, _, pid = pid.rpartition("=")
_, _, self.host = host.rpartition("=")
self.pid = int(pid)
@@ -441,7 +442,7 @@ def _write_log_debug_data(self) -> None:
# write pid, host to disk to sync over FS
self._file.seek(0)
self._file.write(f"pid={self.pid},host={self.host}".encode("utf-8"))
self._file.write("pid=%s,host=%s" % (self.pid, self.host))
self._file.truncate()
self._file.flush()
os.fsync(self._file.fileno())

View File

@@ -1,4 +1,5 @@
# Copyright Spack Project Developers. See COPYRIGHT file for details.
# Copyright 2013-2024 Lawrence Livermore National Security, LLC and other
# Spack Project Developers. See the top-level COPYRIGHT file for details.
#
# SPDX-License-Identifier: (Apache-2.0 OR MIT)

View File

@@ -1,4 +1,5 @@
# Copyright Spack Project Developers. See COPYRIGHT file for details.
# Copyright 2013-2024 Lawrence Livermore National Security, LLC and other
# Spack Project Developers. See the top-level COPYRIGHT file for details.
#
# SPDX-License-Identifier: (Apache-2.0 OR MIT)
import os

View File

@@ -1,4 +1,5 @@
# Copyright Spack Project Developers. See COPYRIGHT file for details.
# Copyright 2013-2024 Lawrence Livermore National Security, LLC and other
# Spack Project Developers. See the top-level COPYRIGHT file for details.
#
# SPDX-License-Identifier: (Apache-2.0 OR MIT)

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