fix and test issue with copying by reference vs value

.github/dependabot.yml

@@ -5,13 +5,3 @@ updates:
     directory: "/"
     schedule:
       interval: "daily"
-  # Requirements to build documentation
-  - package-ecosystem: "pip"
-    directory: "/lib/spack/docs"
-    schedule:
-      interval: "daily"
-  # Requirements to run style checks
-  - package-ecosystem: "pip"
-    directory: "/.github/workflows/style"
-    schedule:
-      interval: "daily"

.github/workflows/audit.yaml

@@ -17,13 +17,10 @@ concurrency:
 jobs:
   # Run audits on all the packages in the built-in repository
   package-audits:
-    runs-on: ${{ matrix.operating_system }}
+    runs-on: ubuntu-latest
-    strategy:
-      matrix:
-        operating_system: ["ubuntu-latest", "macos-latest"]
     steps:
-    - uses: actions/checkout@b4ffde65f46336ab88eb53be808477a3936bae11 # @v2
+    - uses: actions/checkout@8e5e7e5ab8b370d6c329ec480221332ada57f0ab # @v2
-    - uses: actions/setup-python@65d7f2d534ac1bc67fcd62888c5f4f3d2cb2b236 # @v2
+    - uses: actions/setup-python@57ded4d7d5e986d7296eab16560982c6dd7c923b # @v2
       with:
         python-version: ${{inputs.python_version}}
     - name: Install Python packages
@@ -34,7 +31,6 @@ jobs:
       run: |
           . share/spack/setup-env.sh
           coverage run $(which spack) audit packages
-          coverage run $(which spack) audit externals        
           coverage combine
           coverage xml
     - name: Package audits (without coverage)
@@ -42,8 +38,7 @@ jobs:
       run: |
           . share/spack/setup-env.sh
           $(which spack) audit packages
-          $(which spack) audit externals
+    - uses: codecov/codecov-action@894ff025c7b54547a9a2a1e9f228beae737ad3c2 # @v2.1.0
-    - uses: codecov/codecov-action@eaaf4bedf32dbdc6b720b63067d99c4d77d6047d # @v2.1.0
       if: ${{ inputs.with_coverage == 'true' }}
       with:
-        flags: unittests,audits
+        flags: unittests,linux,audits

.github/workflows/bootstrap.yml

@@ -24,7 +24,7 @@ jobs:
               make patch unzip which xz python3 python3-devel tree \
               cmake bison bison-devel libstdc++-static
       - name: Checkout
-        uses: actions/checkout@b4ffde65f46336ab88eb53be808477a3936bae11
+        uses: actions/checkout@8e5e7e5ab8b370d6c329ec480221332ada57f0ab
         with:
           fetch-depth: 0
       - name: Setup non-root user
@@ -42,8 +42,8 @@ jobs:
         shell: runuser -u spack-test -- bash {0}
         run: |
           source share/spack/setup-env.sh
-          spack bootstrap disable github-actions-v0.5
           spack bootstrap disable github-actions-v0.4
+          spack bootstrap disable github-actions-v0.3
           spack external find cmake bison
           spack -d solve zlib
           tree ~/.spack/bootstrap/store/
@@ -62,7 +62,7 @@ jobs:
               make patch unzip xz-utils python3 python3-dev tree \
               cmake bison
       - name: Checkout
-        uses: actions/checkout@b4ffde65f46336ab88eb53be808477a3936bae11
+        uses: actions/checkout@8e5e7e5ab8b370d6c329ec480221332ada57f0ab
         with:
           fetch-depth: 0
       - name: Setup non-root user
@@ -80,8 +80,8 @@ jobs:
         shell: runuser -u spack-test -- bash {0}
         run: |
           source share/spack/setup-env.sh
-          spack bootstrap disable github-actions-v0.5
           spack bootstrap disable github-actions-v0.4
+          spack bootstrap disable github-actions-v0.3
           spack external find cmake bison
           spack -d solve zlib
           tree ~/.spack/bootstrap/store/
@@ -99,7 +99,7 @@ jobs:
               bzip2 curl file g++ gcc gfortran git gnupg2 gzip \
               make patch unzip xz-utils python3 python3-dev tree
       - name: Checkout
-        uses: actions/checkout@b4ffde65f46336ab88eb53be808477a3936bae11
+        uses: actions/checkout@8e5e7e5ab8b370d6c329ec480221332ada57f0ab
         with:
           fetch-depth: 0
       - name: Setup non-root user
@@ -133,7 +133,7 @@ jobs:
               make patch unzip which xz python3 python3-devel tree \
               cmake bison
       - name: Checkout
-        uses: actions/checkout@b4ffde65f46336ab88eb53be808477a3936bae11
+        uses: actions/checkout@8e5e7e5ab8b370d6c329ec480221332ada57f0ab
         with:
           fetch-depth: 0
       - name: Setup repo
@@ -145,8 +145,8 @@ jobs:
       - name: Bootstrap clingo
         run: |
           source share/spack/setup-env.sh
-          spack bootstrap disable github-actions-v0.5
           spack bootstrap disable github-actions-v0.4
+          spack bootstrap disable github-actions-v0.3
           spack external find cmake bison
           spack -d solve zlib
           tree ~/.spack/bootstrap/store/
@@ -158,16 +158,13 @@ jobs:
         run: |
           brew install cmake bison@2.7 tree
       - name: Checkout
-        uses: actions/checkout@b4ffde65f46336ab88eb53be808477a3936bae11
+        uses: actions/checkout@8e5e7e5ab8b370d6c329ec480221332ada57f0ab
-      - uses: actions/setup-python@65d7f2d534ac1bc67fcd62888c5f4f3d2cb2b236 # @v2
-        with:
-          python-version: "3.12"
       - name: Bootstrap clingo
         run: |
           source share/spack/setup-env.sh
           export PATH=/usr/local/opt/bison@2.7/bin:$PATH
-          spack bootstrap disable github-actions-v0.5
           spack bootstrap disable github-actions-v0.4
+          spack bootstrap disable github-actions-v0.3
           spack external find --not-buildable cmake bison
           spack -d solve zlib
           tree ~/.spack/bootstrap/store/
@@ -182,11 +179,11 @@ jobs:
         run: |
           brew install tree
       - name: Checkout
-        uses: actions/checkout@b4ffde65f46336ab88eb53be808477a3936bae11
+        uses: actions/checkout@8e5e7e5ab8b370d6c329ec480221332ada57f0ab
       - name: Bootstrap clingo
         run: |
           set -ex
-          for ver in '3.7' '3.8' '3.9' '3.10' '3.11' ; do
+          for ver in '3.6' '3.7' '3.8' '3.9' '3.10' ; do
             not_found=1
             ver_dir="$(find $RUNNER_TOOL_CACHE/Python -wholename "*/${ver}.*/*/bin" | grep . || true)"
             echo "Testing $ver_dir"
@@ -207,7 +204,7 @@ jobs:
     runs-on: ubuntu-20.04
     steps:
       - name: Checkout
-        uses: actions/checkout@b4ffde65f46336ab88eb53be808477a3936bae11
+        uses: actions/checkout@8e5e7e5ab8b370d6c329ec480221332ada57f0ab
         with:
           fetch-depth: 0
       - name: Setup repo
@@ -217,7 +214,7 @@ jobs:
       - name: Bootstrap clingo
         run: |
           set -ex
-          for ver in '3.7' '3.8' '3.9' '3.10' '3.11' ; do
+          for ver in '3.6' '3.7' '3.8' '3.9' '3.10' ; do
             not_found=1
             ver_dir="$(find $RUNNER_TOOL_CACHE/Python -wholename "*/${ver}.*/*/bin" | grep . || true)"
             echo "Testing $ver_dir"
@@ -250,7 +247,7 @@ jobs:
               bzip2 curl file g++ gcc patchelf gfortran git gzip \
               make patch unzip xz-utils python3 python3-dev tree
       - name: Checkout
-        uses: actions/checkout@b4ffde65f46336ab88eb53be808477a3936bae11
+        uses: actions/checkout@8e5e7e5ab8b370d6c329ec480221332ada57f0ab
         with:
           fetch-depth: 0
       - name: Setup non-root user
@@ -268,7 +265,6 @@ jobs:
         shell: runuser -u spack-test -- bash {0}
         run: |
           source share/spack/setup-env.sh
-          spack bootstrap disable github-actions-v0.4
           spack bootstrap disable spack-install
           spack -d gpg list
           tree ~/.spack/bootstrap/store/
@@ -287,7 +283,7 @@ jobs:
               make patch unzip xz-utils python3 python3-dev tree \
               gawk
       - name: Checkout
-        uses: actions/checkout@b4ffde65f46336ab88eb53be808477a3936bae11
+        uses: actions/checkout@8e5e7e5ab8b370d6c329ec480221332ada57f0ab
         with:
           fetch-depth: 0
       - name: Setup non-root user
@@ -306,8 +302,8 @@ jobs:
         run: |
           source share/spack/setup-env.sh
           spack solve zlib
-          spack bootstrap disable github-actions-v0.5
           spack bootstrap disable github-actions-v0.4
+          spack bootstrap disable github-actions-v0.3
           spack -d gpg list
           tree ~/.spack/bootstrap/store/
 
@@ -320,11 +316,10 @@ jobs:
           # Remove GnuPG since we want to bootstrap it
           sudo rm -rf /usr/local/bin/gpg
       - name: Checkout
-        uses: actions/checkout@b4ffde65f46336ab88eb53be808477a3936bae11
+        uses: actions/checkout@8e5e7e5ab8b370d6c329ec480221332ada57f0ab
       - name: Bootstrap GnuPG
         run: |
           source share/spack/setup-env.sh
-          spack bootstrap disable github-actions-v0.4
           spack bootstrap disable spack-install
           spack -d gpg list
           tree ~/.spack/bootstrap/store/
@@ -338,13 +333,13 @@ jobs:
           # Remove GnuPG since we want to bootstrap it
           sudo rm -rf /usr/local/bin/gpg
       - name: Checkout
-        uses: actions/checkout@b4ffde65f46336ab88eb53be808477a3936bae11
+        uses: actions/checkout@8e5e7e5ab8b370d6c329ec480221332ada57f0ab
       - name: Bootstrap GnuPG
         run: |
           source share/spack/setup-env.sh
           spack solve zlib
-          spack bootstrap disable github-actions-v0.5
           spack bootstrap disable github-actions-v0.4
+          spack bootstrap disable github-actions-v0.3
           spack -d gpg list
           tree ~/.spack/bootstrap/store/
 

.github/workflows/build-containers.yml

@@ -38,39 +38,38 @@ jobs:
         # Meaning of the various items in the matrix list
         # 0: Container name (e.g. ubuntu-bionic)
         # 1: Platforms to build for
-        # 2: Base image (e.g. ubuntu:22.04)
+        # 2: Base image (e.g. ubuntu:18.04)
         dockerfile: [[amazon-linux, 'linux/amd64,linux/arm64', 'amazonlinux:2'],
                      [centos7, 'linux/amd64,linux/arm64,linux/ppc64le', 'centos:7'],
                      [centos-stream, 'linux/amd64,linux/arm64,linux/ppc64le', 'centos:stream'],
                      [leap15, 'linux/amd64,linux/arm64,linux/ppc64le', 'opensuse/leap:15'],
+                     [ubuntu-bionic, 'linux/amd64,linux/arm64,linux/ppc64le', 'ubuntu:18.04'],
                      [ubuntu-focal, 'linux/amd64,linux/arm64,linux/ppc64le', 'ubuntu:20.04'],
                      [ubuntu-jammy, 'linux/amd64,linux/arm64,linux/ppc64le', 'ubuntu:22.04'],
                      [almalinux8, 'linux/amd64,linux/arm64,linux/ppc64le', 'almalinux:8'],
                      [almalinux9, 'linux/amd64,linux/arm64,linux/ppc64le', 'almalinux:9'],
                      [rockylinux8, 'linux/amd64,linux/arm64', 'rockylinux:8'],
-                     [rockylinux9, 'linux/amd64,linux/arm64', 'rockylinux:9'],
+                     [rockylinux9, 'linux/amd64,linux/arm64,linux/ppc64le', 'rockylinux:9'],
                      [fedora37, 'linux/amd64,linux/arm64,linux/ppc64le', 'fedora:37'],
                      [fedora38, 'linux/amd64,linux/arm64,linux/ppc64le', 'fedora:38']]
     name: Build ${{ matrix.dockerfile[0] }}
     if: github.repository == 'spack/spack'
     steps:
       - name: Checkout
-        uses: actions/checkout@b4ffde65f46336ab88eb53be808477a3936bae11 # @v2
+        uses: actions/checkout@8e5e7e5ab8b370d6c329ec480221332ada57f0ab # @v2
 
-      - uses: docker/metadata-action@e6428a5c4e294a61438ed7f43155db912025b6b3
+      - name: Set Container Tag Normal (Nightly)
-        id: docker_meta
+        run: |
-        with:
+          container="${{ matrix.dockerfile[0] }}:latest"
-          images: |
+          echo "container=${container}" >> $GITHUB_ENV
-              ghcr.io/${{ github.repository_owner }}/${{ matrix.dockerfile[0] }}
+          echo "versioned=${container}" >> $GITHUB_ENV
-              ${{ github.repository_owner }}/${{ matrix.dockerfile[0] }}
+
-          tags: |
+        # On a new release create a container with the same tag as the release.
-              type=schedule,pattern=nightly
+      - name: Set Container Tag on Release
-              type=schedule,pattern=develop
+        if: github.event_name == 'release'
-              type=semver,pattern={{version}}
+        run: |
-              type=semver,pattern={{major}}.{{minor}}
+          versioned="${{matrix.dockerfile[0]}}:${GITHUB_REF##*/}"
-              type=semver,pattern={{major}}
+          echo "versioned=${versioned}" >> $GITHUB_ENV
-              type=ref,event=branch
-              type=ref,event=pr
 
       - name: Generate the Dockerfile
         env:
@@ -87,19 +86,19 @@ jobs:
           fi
 
       - name: Upload Dockerfile
-        uses: actions/upload-artifact@a8a3f3ad30e3422c9c7b888a15615d19a852ae32
+        uses: actions/upload-artifact@0b7f8abb1508181956e8e162db84b466c27e18ce
         with:
           name: dockerfiles
           path: dockerfiles
 
       - name: Set up QEMU
-        uses: docker/setup-qemu-action@68827325e0b33c7199eb31dd4e31fbe9023e06e3
+        uses: docker/setup-qemu-action@e81a89b1732b9c48d79cd809d8d81d79c4647a18 # @v1
 
       - name: Set up Docker Buildx
-        uses: docker/setup-buildx-action@f95db51fddba0c2d1ec667646a06c2ce06100226
+        uses: docker/setup-buildx-action@4b4e9c3e2d4531116a6f8ba8e71fc6e2cb6e6c8c # @v1
 
       - name: Log in to GitHub Container Registry
-        uses: docker/login-action@343f7c4344506bcbf9b4de18042ae17996df046d
+        uses: docker/login-action@f4ef78c080cd8ba55a85445d5b36e214a81df20a # @v1
         with:
           registry: ghcr.io
           username: ${{ github.actor }}
@@ -107,18 +106,21 @@ jobs:
 
       - name: Log in to DockerHub
         if: github.event_name != 'pull_request'
-        uses: docker/login-action@343f7c4344506bcbf9b4de18042ae17996df046d
+        uses: docker/login-action@f4ef78c080cd8ba55a85445d5b36e214a81df20a # @v1
         with:
           username: ${{ secrets.DOCKERHUB_USERNAME }}
           password: ${{ secrets.DOCKERHUB_TOKEN }}
 
       - name: Build & Deploy ${{ matrix.dockerfile[0] }}
-        uses: docker/build-push-action@4a13e500e55cf31b7a5d59a38ab2040ab0f42f56
+        uses: docker/build-push-action@3b5e8027fcad23fda98b2e3ac259d8d67585f671 # @v2
         with:
           context: dockerfiles/${{ matrix.dockerfile[0] }}
           platforms: ${{ matrix.dockerfile[1] }}
           push: ${{ github.event_name != 'pull_request' }}
           cache-from: type=gha
           cache-to: type=gha,mode=max
-          tags: ${{ steps.docker_meta.outputs.tags }}
+          tags: |
-          labels: ${{ steps.docker_meta.outputs.labels }}
+            spack/${{ env.container }}
+            spack/${{ env.versioned }}
+            ghcr.io/spack/${{ env.container }}
+            ghcr.io/spack/${{ env.versioned }}

.github/workflows/ci.yaml

@@ -35,7 +35,7 @@ jobs:
       core: ${{ steps.filter.outputs.core }}
       packages: ${{ steps.filter.outputs.packages }}
     steps:
-      - uses: actions/checkout@b4ffde65f46336ab88eb53be808477a3936bae11 # @v2
+      - uses: actions/checkout@8e5e7e5ab8b370d6c329ec480221332ada57f0ab # @v2
         if: ${{ github.event_name == 'push' }}
         with:
           fetch-depth: 0

.github/workflows/nightly-win-builds.yml

@@ -1,31 +0,0 @@
-name: Windows Paraview Nightly
-
-on:
-  schedule:
-    - cron: '0 2 * * *' # Run at 2 am
-
-defaults:
-  run:
-    shell:
-     powershell Invoke-Expression -Command "./share/spack/qa/windows_test_setup.ps1"; {0}
-
-
-jobs:
-  build-paraview-deps:
-    runs-on: windows-latest
-    steps:
-    - uses: actions/checkout@b4ffde65f46336ab88eb53be808477a3936bae11
-      with:
-        fetch-depth: 0
-    - uses: actions/setup-python@65d7f2d534ac1bc67fcd62888c5f4f3d2cb2b236
-      with:
-        python-version: 3.9
-    - name: Install Python packages
-      run: |
-          python -m pip install --upgrade pip six pywin32 setuptools coverage
-    - name: Build Test
-      run: |
-        spack compiler find
-        spack external find cmake ninja win-sdk win-wdk wgl msmpi
-        spack -d install -y --cdash-upload-url https://cdash.spack.io/submit.php?project=Spack+on+Windows --cdash-track Nightly --only dependencies paraview
-        exit 0

.github/workflows/style/requirements.txt

@@ -1,7 +0,0 @@
-black==23.11.0
-clingo==5.6.2
-flake8==6.1.0
-isort==5.12.0
-mypy==1.7.1
-types-six==1.16.21.9
-vermin==1.6.0

.github/workflows/unit_tests.yaml

@@ -15,7 +15,7 @@ jobs:
     strategy:
       matrix:
         os: [ubuntu-latest]
-        python-version: ['3.7', '3.8', '3.9', '3.10', '3.11', '3.12']
+        python-version: ['3.7', '3.8', '3.9', '3.10', '3.11']
         concretizer: ['clingo']
         on_develop:
         - ${{ github.ref == 'refs/heads/develop' }}
@@ -45,16 +45,12 @@ jobs:
           os: ubuntu-latest
           concretizer: 'clingo'
           on_develop: false
-        - python-version: '3.11'
-          os: ubuntu-latest
-          concretizer: 'clingo'
-          on_develop: false
 
     steps:
-    - uses: actions/checkout@b4ffde65f46336ab88eb53be808477a3936bae11 # @v2
+    - uses: actions/checkout@8e5e7e5ab8b370d6c329ec480221332ada57f0ab # @v2
       with:
         fetch-depth: 0
-    - uses: actions/setup-python@65d7f2d534ac1bc67fcd62888c5f4f3d2cb2b236 # @v2
+    - uses: actions/setup-python@57ded4d7d5e986d7296eab16560982c6dd7c923b # @v2
       with:
         python-version: ${{ matrix.python-version }}
     - name: Install System packages
@@ -91,17 +87,17 @@ jobs:
           UNIT_TEST_COVERAGE: ${{ matrix.python-version == '3.11' }}
       run: |
           share/spack/qa/run-unit-tests
-    - uses: codecov/codecov-action@eaaf4bedf32dbdc6b720b63067d99c4d77d6047d
+    - uses: codecov/codecov-action@894ff025c7b54547a9a2a1e9f228beae737ad3c2
       with:
         flags: unittests,linux,${{ matrix.concretizer }}
   # Test shell integration
   shell:
     runs-on: ubuntu-latest
     steps:
-    - uses: actions/checkout@b4ffde65f46336ab88eb53be808477a3936bae11 # @v2
+    - uses: actions/checkout@8e5e7e5ab8b370d6c329ec480221332ada57f0ab # @v2
       with:
         fetch-depth: 0
-    - uses: actions/setup-python@65d7f2d534ac1bc67fcd62888c5f4f3d2cb2b236 # @v2
+    - uses: actions/setup-python@57ded4d7d5e986d7296eab16560982c6dd7c923b # @v2
       with:
         python-version: '3.11'
     - name: Install System packages
@@ -122,7 +118,7 @@ jobs:
           COVERAGE: true
       run: |
           share/spack/qa/run-shell-tests
-    - uses: codecov/codecov-action@eaaf4bedf32dbdc6b720b63067d99c4d77d6047d
+    - uses: codecov/codecov-action@894ff025c7b54547a9a2a1e9f228beae737ad3c2
       with:
         flags: shelltests,linux
 
@@ -137,7 +133,7 @@ jobs:
           dnf install -y \
               bzip2 curl file gcc-c++ gcc gcc-gfortran git gnupg2 gzip \
               make patch tcl unzip which xz
-    - uses: actions/checkout@b4ffde65f46336ab88eb53be808477a3936bae11 # @v2
+    - uses: actions/checkout@8e5e7e5ab8b370d6c329ec480221332ada57f0ab # @v2
     - name: Setup repo and non-root user
       run: |
           git --version
@@ -156,10 +152,10 @@ jobs:
   clingo-cffi:
     runs-on: ubuntu-latest
     steps:
-    - uses: actions/checkout@b4ffde65f46336ab88eb53be808477a3936bae11 # @v2
+    - uses: actions/checkout@8e5e7e5ab8b370d6c329ec480221332ada57f0ab # @v2
       with:
         fetch-depth: 0
-    - uses: actions/setup-python@65d7f2d534ac1bc67fcd62888c5f4f3d2cb2b236 # @v2
+    - uses: actions/setup-python@57ded4d7d5e986d7296eab16560982c6dd7c923b # @v2
       with:
         python-version: '3.11'
     - name: Install System packages
@@ -169,7 +165,6 @@ jobs:
     - name: Install Python packages
       run: |
           pip install --upgrade pip setuptools pytest coverage[toml] pytest-cov clingo pytest-xdist
-          pip install --upgrade flake8 "isort>=4.3.5" "mypy>=0.900" "click" "black"
     - name: Setup git configuration
       run: |
           # Need this for the git tests to succeed.
@@ -181,7 +176,7 @@ jobs:
           SPACK_TEST_SOLVER: clingo
       run: |
           share/spack/qa/run-unit-tests
-    - uses: codecov/codecov-action@eaaf4bedf32dbdc6b720b63067d99c4d77d6047d # @v2.1.0
+    - uses: codecov/codecov-action@894ff025c7b54547a9a2a1e9f228beae737ad3c2 # @v2.1.0
       with:
         flags: unittests,linux,clingo
   # Run unit tests on MacOS
@@ -189,12 +184,12 @@ jobs:
     runs-on: macos-latest
     strategy:
       matrix:
-        python-version: ["3.11"]
+        python-version: ["3.10"]
     steps:
-    - uses: actions/checkout@b4ffde65f46336ab88eb53be808477a3936bae11 # @v2
+    - uses: actions/checkout@8e5e7e5ab8b370d6c329ec480221332ada57f0ab # @v2
       with:
         fetch-depth: 0
-    - uses: actions/setup-python@65d7f2d534ac1bc67fcd62888c5f4f3d2cb2b236 # @v2
+    - uses: actions/setup-python@57ded4d7d5e986d7296eab16560982c6dd7c923b # @v2
       with:
         python-version: ${{ matrix.python-version }}
     - name: Install Python packages
@@ -215,7 +210,7 @@ jobs:
         $(which spack) bootstrap disable spack-install
         $(which spack) solve zlib
         common_args=(--dist loadfile --tx '4*popen//python=./bin/spack-tmpconfig python -u ./bin/spack python' -x)
-        $(which spack) unit-test --verbose --cov --cov-config=pyproject.toml --cov-report=xml:coverage.xml "${common_args[@]}"
+        $(which spack) unit-test --cov --cov-config=pyproject.toml --cov-report=xml:coverage.xml "${common_args[@]}"
-    - uses: codecov/codecov-action@eaaf4bedf32dbdc6b720b63067d99c4d77d6047d
+    - uses: codecov/codecov-action@894ff025c7b54547a9a2a1e9f228beae737ad3c2
       with:
         flags: unittests,macos

.github/workflows/valid-style.yml

@@ -18,15 +18,15 @@ jobs:
   validate:
     runs-on: ubuntu-latest
     steps:
-    - uses: actions/checkout@b4ffde65f46336ab88eb53be808477a3936bae11
+    - uses: actions/checkout@8e5e7e5ab8b370d6c329ec480221332ada57f0ab # @v2
-    - uses: actions/setup-python@65d7f2d534ac1bc67fcd62888c5f4f3d2cb2b236
+    - uses: actions/setup-python@57ded4d7d5e986d7296eab16560982c6dd7c923b # @v2
       with:
         python-version: '3.11'
         cache: 'pip'
     - name: Install Python Packages
       run: |
-        pip install --upgrade pip setuptools
+        pip install --upgrade pip
-        pip install -r .github/workflows/style/requirements.txt
+        pip install --upgrade vermin
     - name: vermin (Spack's Core)
       run: vermin --backport importlib --backport argparse --violations --backport typing -t=3.6- -vvv lib/spack/spack/ lib/spack/llnl/ bin/
     - name: vermin (Repositories)
@@ -35,17 +35,16 @@ jobs:
   style:
     runs-on: ubuntu-latest
     steps:
-    - uses: actions/checkout@b4ffde65f46336ab88eb53be808477a3936bae11
+    - uses: actions/checkout@8e5e7e5ab8b370d6c329ec480221332ada57f0ab # @v2
       with:
         fetch-depth: 0
-    - uses: actions/setup-python@65d7f2d534ac1bc67fcd62888c5f4f3d2cb2b236
+    - uses: actions/setup-python@57ded4d7d5e986d7296eab16560982c6dd7c923b # @v2
       with:
         python-version: '3.11'
         cache: 'pip'
     - name: Install Python packages
       run: |
-        pip install --upgrade pip setuptools
+        python3 -m pip install --upgrade pip setuptools types-six black==23.1.0 mypy isort clingo flake8
-        pip install -r .github/workflows/style/requirements.txt
     - name: Setup git configuration
       run: |
         # Need this for the git tests to succeed.
@@ -69,7 +68,7 @@ jobs:
           dnf install -y \
               bzip2 curl file gcc-c++ gcc gcc-gfortran git gnupg2 gzip \
               make patch tcl unzip which xz
-      - uses: actions/checkout@b4ffde65f46336ab88eb53be808477a3936bae11 # @v2
+      - uses: actions/checkout@8e5e7e5ab8b370d6c329ec480221332ada57f0ab # @v2
       - name: Setup repo and non-root user
         run: |
           git --version
@@ -82,7 +81,6 @@ jobs:
         shell: runuser -u spack-test -- bash {0}
         run: |
           source share/spack/setup-env.sh
-          spack debug report
           spack -d bootstrap now --dev
           spack style -t black
           spack unit-test -V

.github/workflows/windows_python.yml

@@ -15,10 +15,10 @@ jobs:
   unit-tests:
     runs-on: windows-latest
     steps:
-    - uses: actions/checkout@b4ffde65f46336ab88eb53be808477a3936bae11
+    - uses: actions/checkout@8e5e7e5ab8b370d6c329ec480221332ada57f0ab
       with:
         fetch-depth: 0
-    - uses: actions/setup-python@65d7f2d534ac1bc67fcd62888c5f4f3d2cb2b236
+    - uses: actions/setup-python@57ded4d7d5e986d7296eab16560982c6dd7c923b
       with:
         python-version: 3.9
     - name: Install Python packages
@@ -33,16 +33,16 @@ jobs:
         ./share/spack/qa/validate_last_exit.ps1
         coverage combine -a
         coverage xml
-    - uses: codecov/codecov-action@eaaf4bedf32dbdc6b720b63067d99c4d77d6047d
+    - uses: codecov/codecov-action@894ff025c7b54547a9a2a1e9f228beae737ad3c2
       with:
         flags: unittests,windows
   unit-tests-cmd:
     runs-on: windows-latest
     steps:
-    - uses: actions/checkout@b4ffde65f46336ab88eb53be808477a3936bae11
+    - uses: actions/checkout@8e5e7e5ab8b370d6c329ec480221332ada57f0ab
       with:
         fetch-depth: 0
-    - uses: actions/setup-python@65d7f2d534ac1bc67fcd62888c5f4f3d2cb2b236
+    - uses: actions/setup-python@57ded4d7d5e986d7296eab16560982c6dd7c923b
       with:
         python-version: 3.9
     - name: Install Python packages
@@ -57,16 +57,16 @@ jobs:
         ./share/spack/qa/validate_last_exit.ps1
         coverage combine -a
         coverage xml
-    - uses: codecov/codecov-action@eaaf4bedf32dbdc6b720b63067d99c4d77d6047d
+    - uses: codecov/codecov-action@894ff025c7b54547a9a2a1e9f228beae737ad3c2
       with:
         flags: unittests,windows
   build-abseil:
     runs-on: windows-latest
     steps:
-    - uses: actions/checkout@b4ffde65f46336ab88eb53be808477a3936bae11
+    - uses: actions/checkout@8e5e7e5ab8b370d6c329ec480221332ada57f0ab
       with:
         fetch-depth: 0
-    - uses: actions/setup-python@65d7f2d534ac1bc67fcd62888c5f4f3d2cb2b236
+    - uses: actions/setup-python@57ded4d7d5e986d7296eab16560982c6dd7c923b
       with:
         python-version: 3.9
     - name: Install Python packages
@@ -75,5 +75,6 @@ jobs:
     - name: Build Test
       run: |
         spack compiler find
-        spack -d external find cmake ninja
+        spack external find cmake
+        spack external find ninja
         spack -d install abseil-cpp

.readthedocs.yml

@@ -1,16 +1,10 @@
 version: 2
 
-build:
-  os: "ubuntu-22.04"
-  apt_packages:
-    - graphviz
-  tools:
-    python: "3.11"
-
 sphinx:
   configuration: lib/spack/docs/conf.py
   fail_on_warning: true
 
 python:
+  version: 3.7
   install:
     - requirements: lib/spack/docs/requirements.txt

CHANGELOG.md

@@ -1,338 +1,3 @@
-# v0.21.0 (2023-11-11)
-
-`v0.21.0` is a major feature release.
-
-## Features in this release
-
-1. **Better error messages with condition chaining**
-
-   In v0.18, we added better error messages that could tell you what problem happened,
-   but they couldn't tell you *why* it happened. `0.21` adds *condition chaining* to the
-   solver, and Spack can now trace back through the conditions that led to an error and
-   build a tree of causes potential causes and where they came from. For example:
-
-   ```console
-   $ spack solve hdf5 ^cmake@3.0.1
-   ==> Error: concretization failed for the following reasons:
-
-      1. Cannot satisfy 'cmake@3.0.1'
-      2. Cannot satisfy 'cmake@3.0.1'
-           required because hdf5 ^cmake@3.0.1 requested from CLI
-      3. Cannot satisfy 'cmake@3.18:' and 'cmake@3.0.1
-           required because hdf5 ^cmake@3.0.1 requested from CLI
-           required because hdf5 depends on cmake@3.18: when @1.13:
-             required because hdf5 ^cmake@3.0.1 requested from CLI
-      4. Cannot satisfy 'cmake@3.12:' and 'cmake@3.0.1
-           required because hdf5 depends on cmake@3.12:
-             required because hdf5 ^cmake@3.0.1 requested from CLI
-           required because hdf5 ^cmake@3.0.1 requested from CLI
-   ```
-
-   More details in #40173.
-
-2. **OCI build caches**
-
-   You can now use an arbitrary [OCI](https://opencontainers.org) registry as a build
-   cache:
-
-   ```console
-   $ spack mirror add my_registry oci://user/image # Dockerhub
-   $ spack mirror add my_registry oci://ghcr.io/haampie/spack-test # GHCR
-   $ spack mirror set --push --oci-username ... --oci-password ... my_registry  # set login creds
-   $ spack buildcache push my_registry [specs...]
-   ```
-
-   And you can optionally add a base image to get *runnable* images:
-
-   ```console
-   $ spack buildcache push --base-image ubuntu:23.04 my_registry python
-   Pushed ... as [image]:python-3.11.2-65txfcpqbmpawclvtasuog4yzmxwaoia.spack
-
-   $ docker run --rm -it [image]:python-3.11.2-65txfcpqbmpawclvtasuog4yzmxwaoia.spack
-   ```
-
-   This creates a container image from the Spack installations on the host system,
-   without the need to run `spack install` from a `Dockerfile` or `sif` file. It also
-   addresses the inconvenience of losing binaries of dependencies when `RUN spack
-   install` fails inside `docker build`.
-
-   Further, the container image layers and build cache tarballs are the same files. This
-   means that `spack install` and `docker pull` use the exact same underlying binaries.
-   If you previously used `spack install` inside of `docker build`, this feature helps
-   you save storage by a factor two.
-
-   More details in #38358.
-
-3. **Multiple versions of build dependencies**
-
-   Increasingly, complex package builds require multiple versions of some build
-   dependencies. For example, Python packages frequently require very specific versions
-   of `setuptools`, `cython`, and sometimes different physics packages require different
-   versions of Python to build. The concretizer enforced that every solve was *unified*,
-   i.e., that there only be one version of every package. The concretizer now supports
-   "duplicate" nodes for *build dependencies*, but enforces unification through
-   transitive link and run dependencies. This will allow it to better resolve complex
-   dependency graphs in ecosystems like Python, and it also gets us very close to
-   modeling compilers as proper dependencies.
-
-   This change required a major overhaul of the concretizer, as well as a number of
-   performance optimizations. See #38447, #39621.
-
-4. **Cherry-picking virtual dependencies**
-
-   You can now select only a subset of virtual dependencies from a spec that may provide
-   more. For example, if you want `mpich` to be your `mpi` provider, you can be explicit
-   by writing:
-
-   ```
-   hdf5 ^[virtuals=mpi] mpich
-   ```
-
-   Or, if you want to use, e.g., `intel-parallel-studio` for `blas` along with an external
-   `lapack` like `openblas`, you could write:
-
-   ```
-   strumpack ^[virtuals=mpi] intel-parallel-studio+mkl ^[virtuals=lapack] openblas
-   ```
-
-   The `virtuals=mpi` is an edge attribute, and dependency edges in Spack graphs now
-   track which virtuals they satisfied. More details in #17229 and #35322.
-
-   Note for packaging: in Spack 0.21 `spec.satisfies("^virtual")` is true if and only if
-   the package specifies `depends_on("virtual")`. This is different from Spack 0.20,
-   where depending on a provider implied depending on the virtual provided. See #41002
-   for an example where `^mkl` was being used to test for several `mkl` providers in a
-   package that did not depend on `mkl`.
-
-5. **License directive**
-
-   Spack packages can now have license metadata, with the new `license()` directive:
-
-   ```python
-       license("Apache-2.0")
-   ```
-
-   Licenses use [SPDX identifiers](https://spdx.org/licenses), and you can use SPDX
-   expressions to combine them:
-
-   ```python
-       license("Apache-2.0 OR MIT")
-   ```
-
-   Like other directives in Spack, it's conditional, so you can handle complex cases like
-   Spack itself:
-
-   ```python
-      license("LGPL-2.1", when="@:0.11")
-      license("Apache-2.0 OR MIT", when="@0.12:")
-   ```
-
-   More details in #39346, #40598.
-
-6. **`spack deconcretize` command**
-
-   We are getting close to having a `spack update` command for environments, but we're
-   not quite there yet. This is the next best thing. `spack deconcretize` gives you
-   control over what you want to update in an already concrete environment. If you have
-   an environment built with, say, `meson`, and you want to update your `meson` version,
-   you can run:
-
-   ```console
-   spack deconcretize meson
-   ```
-
-   and have everything that depends on `meson` rebuilt the next time you run `spack
-   concretize`. In a future Spack version, we'll handle all of this in a single command,
-   but for now you can use this to drop bits of your lockfile and resolve your
-   dependencies again. More in #38803.
-
-7. **UI Improvements**
-
-   The venerable `spack info` command was looking shabby compared to the rest of Spack's
-   UI, so we reworked it to have a bit more flair. `spack info` now makes much better
-   use of terminal space and shows variants, their values, and their descriptions much
-   more clearly. Conditional variants are grouped separately so you can more easily
-   understand how packages are structured. More in #40998.
-
-   `spack checksum` now allows you to filter versions from your editor, or by version
-   range. It also notifies you about potential download URL changes. See #40403.
-
-8. **Environments can include definitions**
-
-   Spack did not previously support using `include:` with The
-   [definitions](https://spack.readthedocs.io/en/latest/environments.html#spec-list-references)
-   section of an environment, but now it does. You can use this to curate lists of specs
-   and more easily reuse them across environments. See #33960.
-
-9. **Aliases**
-
-   You can now add aliases to Spack commands in `config.yaml`, e.g. this might enshrine
-   your favorite args to `spack find` as `spack f`:
-
-   ```yaml
-   config:
-     aliases:
-       f: find -lv
-   ```
-
-   See #17229.
-
-10. **Improved autoloading of modules**
-
-    Spack 0.20 was the first release to enable autoloading of direct dependencies in
-    module files.
-
-    The downside of this was that `module avail` and `module load` tab completion would
-    show users too many modules to choose from, and many users disabled generating
-    modules for dependencies through `exclude_implicits: true`. Further, it was
-    necessary to keep hashes in module names to avoid file name clashes.
-
-    In this release, you can start using `hide_implicits: true` instead, which exposes
-    only explicitly installed packages to the user, while still autoloading
-    dependencies. On top of that, you can safely use `hash_length: 0`, as this config
-    now only applies to the modules exposed to the user -- you don't have to worry about
-    file name clashes for hidden dependencies.
-
-   Note: for `tcl` this feature requires Modules 4.7 or higher
-
-11. **Updated container labeling**
-
-    Nightly Docker images from the `develop` branch will now be tagged as `:develop` and
-    `:nightly`. The `:latest` tag is no longer associated with `:develop`, but with the
-    latest stable release. Releases will be tagged with `:{major}`, `:{major}.{minor}`
-    and `:{major}.{minor}.{patch}`. `ubuntu:18.04` has also been removed from the list of
-    generated Docker images, as it is no longer supported. See #40593.
-
-## Other new commands and directives
-
-* `spack env activate` without arguments now loads a `default` environment that you do
-  not have to create (#40756).
-* `spack find -H` / `--hashes`: a new shortcut for piping `spack find` output to
-  other commands (#38663)
-* Add `spack checksum --verify`, fix `--add` (#38458)
-* New `default_args` context manager factors out common args for directives (#39964)
-* `spack compiler find --[no]-mixed-toolchain` lets you easily mix `clang` and
-  `gfortran` on Linux (#40902)
-
-## Performance improvements
-
-* `spack external find` execution is now much faster (#39843)
-* `spack location -i` now much faster on success (#40898)
-* Drop redundant rpaths post install (#38976)
-* ASP-based solver: avoid cycles in clingo using hidden directive (#40720)
-* Fix multiple quadratic complexity issues in environments (#38771)
-
-## Other new features of note
-
-* archspec: update to v0.2.2, support for Sapphire Rapids, Power10, Neoverse V2 (#40917)
-* Propagate variants across nodes that don't have that variant (#38512)
-* Implement fish completion (#29549)
-* Can now distinguish between source/binary mirror; don't ping mirror.spack.io as much (#34523)
-* Improve status reporting on install (add [n/total] display) (#37903)
-
-## Windows
-
-This release has the best Windows support of any Spack release yet, with numerous
-improvements and much larger swaths of tests passing:
-
-* MSVC and SDK improvements (#37711, #37930, #38500, #39823, #39180)
-* Windows external finding: update default paths; treat .bat as executable on Windows (#39850)
-* Windows decompression: fix removal of intermediate file (#38958)
-* Windows: executable/path handling (#37762)
-* Windows build systems: use ninja and enable tests (#33589)
-* Windows testing (#36970, #36972, #36973, #36840, #36977, #36792, #36834, #34696, #36971)
-* Windows PowerShell support (#39118, #37951)
-* Windows symlinking and libraries (#39933, #38599, #34701, #38578, #34701)
-
-## Notable refactors
-* User-specified flags take precedence over others in Spack compiler wrappers (#37376)
-* Improve setup of build, run, and test environments (#35737, #40916)
-* `make` is no longer a required system dependency of Spack (#40380)
-* Support Python 3.12 (#40404, #40155, #40153)
-* docs: Replace package list with packages.spack.io (#40251)
-* Drop Python 2 constructs in Spack (#38720, #38718, #38703)
-
-## Binary cache and stack updates
-* e4s arm stack: duplicate and target neoverse v1 (#40369)
-* Add macOS ML CI stacks (#36586)
-* E4S Cray CI Stack (#37837)
-* e4s cray: expand spec list (#38947)
-* e4s cray sles ci: expand spec list (#39081)
-
-## Removals, deprecations, and syntax changes
-* ASP: targets, compilers and providers soft-preferences are only global (#31261)
-* Parser: fix ambiguity with whitespace in version ranges (#40344)
-* Module file generation is disabled by default; you'll need to enable it to use it (#37258)
-* Remove deprecated "extra_instructions" option for containers (#40365)
-* Stand-alone test feature deprecation postponed to v0.22 (#40600)
-* buildcache push: make `--allow-root` the default and deprecate the option (#38878)
-
-## Notable Bugfixes
-* Bugfix: propagation of multivalued variants (#39833)
-* Allow `/` in git versions (#39398)
-* Fetch & patch: actually acquire stage lock, and many more issues (#38903)
-* Environment/depfile: better escaping of targets with Git versions (#37560)
-* Prevent "spack external find" to error out on wrong permissions (#38755)
-* lmod: allow core compiler to be specified with a version range (#37789)
-
-## Spack community stats
-
-* 7,469 total packages, 303 new since `v0.20.0`
-    * 150 new Python packages
-    * 34 new R packages
-* 353 people contributed to this release
-    * 336 committers to packages
-    * 65 committers to core
-
-
-# v0.20.3 (2023-10-31)
-
-## Bugfixes
-
-- Fix a bug where `spack mirror set-url` would drop configured connection info (reverts #34210)
-- Fix a minor issue with package hash computation for Python 3.12 (#40328)
-
-
-# v0.20.2 (2023-10-03)
-
-## Features in this release
-
-Spack now supports Python 3.12 (#40155)
-
-## Bugfixes
-
-- Improve escaping in Tcl module files (#38375)
-- Make repo cache work on repositories with zero mtime (#39214)
-- Ignore errors for newer, incompatible buildcache version (#40279)
-- Print an error when git is required, but missing (#40254)
-- Ensure missing build dependencies get installed when using `spack install --overwrite` (#40252)
-- Fix an issue where Spack freezes when the build process unexpectedly exits (#39015)
-- Fix a bug where installation failures cause an unrelated `NameError` to be thrown (#39017)
-- Fix an issue where Spack package versions would be incorrectly derived from git tags (#39414)
-- Fix a bug triggered when file locking fails internally (#39188)
-- Prevent "spack external find" to error out when a directory cannot be accessed (#38755)
-- Fix multiple performance regressions in environments (#38771)
-- Add more ignored modules to `pyproject.toml` for `mypy` (#38769)
-
-
-# v0.20.1 (2023-07-10)
-
-## Spack Bugfixes
-
-- Spec removed from an environment where not actually removed if `--force` was not given (#37877)
-- Speed-up module file generation (#37739)
-- Hotfix for a few recipes that treat CMake as a link dependency (#35816)
-- Fix re-running stand-alone test a second time, which was getting a trailing spurious failure (#37840)
-- Fixed reading JSON manifest on Cray, reporting non-concrete specs (#37909)
-- Fixed a few bugs when generating Dockerfiles from Spack (#37766,#37769)
-- Fixed a few long-standing bugs when generating module files (#36678,#38347,#38465,#38455)
-- Fixed issues with building Python extensions using an external Python (#38186)
-- Fixed compiler removal from command line (#38057)
-- Show external status as [e] (#33792)
-- Backported `archspec` fixes (#37793)
-- Improved a few error messages (#37791)
-
-
 # v0.20.0 (2023-05-21)
 
 `v0.20.0` is a major feature release.

CITATION.cff

@@ -27,53 +27,12 @@
 # And here's the CITATION.cff format:
 #
 cff-version: 1.2.0
-type: software
 message: "If you are referencing Spack in a publication, please cite the paper below."
-title: "The Spack Package Manager: Bringing Order to HPC Software Chaos"
-abstract: >-
-  Large HPC centers spend considerable time supporting software for thousands of users, but the complexity of HPC software is quickly outpacing the capabilities of existing software management tools.
-  Scientific applications require specific versions of compilers, MPI, and other dependency libraries, so using a single, standard software stack is infeasible.
-  However, managing many configurations is difficult because the configuration space is combinatorial in size.
-  We introduce Spack, a tool used at Lawrence Livermore National Laboratory to manage this complexity.
-  Spack provides a novel, re- cursive specification syntax to invoke parametric builds of packages and dependencies.
-  It allows any number of builds to coexist on the same system, and it ensures that installed packages can find their dependencies, regardless of the environment.
-  We show through real-world use cases that Spack supports diverse and demanding applications, bringing order to HPC software chaos.
 preferred-citation:
-  title: "The Spack Package Manager: Bringing Order to HPC Software Chaos"
   type: conference-paper
-  url: "https://tgamblin.github.io/pubs/spack-sc15.pdf"
+  doi: "10.1145/2807591.2807623"
+  url: "https://github.com/spack/spack"
   authors:
-    - family-names: "Gamblin"
-      given-names: "Todd"
-    - family-names: "LeGendre"
-      given-names: "Matthew"
-    - family-names: "Collette"
-      given-names: "Michael R."
-    - family-names: "Lee"
-      given-names: "Gregory L."
-    - family-names: "Moody"
-      given-names: "Adam"
-    - family-names: "de Supinski"
-      given-names: "Bronis R."
-    - family-names: "Futral"
-      given-names: "Scott"
-  conference:
-    name: "Supercomputing 2015 (SC’15)"
-    city: "Austin"
-    region: "Texas"
-    country: "US"
-    date-start: 2015-11-15
-    date-end: 2015-11-20
-  month: 11
-  year: 2015
-  identifiers:
-    - description: "The concept DOI of the work."
-      type: doi
-      value: 10.1145/2807591.2807623
-    - description: "The DOE Document Release Number of the work"
-      type: other 
-      value: "LLNL-CONF-669890"
-authors:
   - family-names: "Gamblin"
     given-names: "Todd"
   - family-names: "LeGendre"
@@ -88,3 +47,12 @@ authors:
     given-names: "Bronis R."
   - family-names: "Futral"
     given-names: "Scott"
+  title: "The Spack Package Manager: Bringing Order to HPC Software Chaos"
+  conference:
+    name: "Supercomputing 2015 (SC’15)"
+    city: "Austin"
+    region: "Texas"
+    country: "USA"
+  month: November 15-20
+  year: 2015
+  notes: LLNL-CONF-669890

README.md

@@ -7,7 +7,6 @@
 [![Read the Docs](https://readthedocs.org/projects/spack/badge/?version=latest)](https://spack.readthedocs.io)
 [![Code style: black](https://img.shields.io/badge/code%20style-black-000000.svg)](https://github.com/psf/black)
 [![Slack](https://slack.spack.io/badge.svg)](https://slack.spack.io)
-[![Matrix](https://img.shields.io/matrix/spack-space%3Amatrix.org?label=Matrix)](https://matrix.to/#/#spack-space:matrix.org)
 
 Spack is a multi-platform package manager that builds and installs
 multiple versions and configurations of software. It works on Linux,
@@ -63,10 +62,7 @@ Resources:
 
 * **Slack workspace**: [spackpm.slack.com](https://spackpm.slack.com).
   To get an invitation, visit [slack.spack.io](https://slack.spack.io).
-* **Matrix space**: [#spack-space:matrix.org](https://matrix.to/#/#spack-space:matrix.org):
+* [**Github Discussions**](https://github.com/spack/spack/discussions): not just for discussions, also Q&A.
-  [bridged](https://github.com/matrix-org/matrix-appservice-slack#matrix-appservice-slack) to Slack.
-* [**Github Discussions**](https://github.com/spack/spack/discussions):
-  not just for discussions, but also Q&A.
 * **Mailing list**: [groups.google.com/d/forum/spack](https://groups.google.com/d/forum/spack)
 * **Twitter**: [@spackpm](https://twitter.com/spackpm). Be sure to
   `@mention` us!

SECURITY.md

@@ -2,26 +2,24 @@
 
 ## Supported Versions
 
-We provide security updates for `develop` and for the last two
+We provide security updates for the following releases.
-stable (`0.x`) release series of Spack. Security updates will be
-made available as patch (`0.x.1`, `0.x.2`, etc.) releases.
-
 For more on Spack's release structure, see
 [`README.md`](https://github.com/spack/spack#releases).
 
+
+| Version | Supported          |
+| ------- | ------------------ |
+| develop | :white_check_mark: |
+| 0.19.x  | :white_check_mark: |
+| 0.18.x  | :white_check_mark: |
+
 ## Reporting a Vulnerability
 
-You can report a vulnerability using GitHub's private reporting
+To report a vulnerability or other security
-feature:
+issue, email maintainers@spack.io.
 
-1. Go to [github.com/spack/spack/security](https://github.com/spack/spack/security).
+You can expect to hear back within two days.
-2. Click "Report a vulnerability" in the upper right corner of that page.
+If your security issue is accepted, we will do
-3. Fill out the form and submit your draft security advisory.
+our best to release a fix within a week. If
-
+fixing the issue will take longer than this,
-More details are available in
+we will discuss timeline options with you.
-[GitHub's docs](https://docs.github.com/en/code-security/security-advisories/guidance-on-reporting-and-writing/privately-reporting-a-security-vulnerability).
-
-You can expect to hear back about security issues within two days.
-If your security issue is accepted, we will do our best to release
-a fix within a week. If fixing the issue will take longer than
-this, we will discuss timeline options with you.

bin/spack

@@ -25,6 +25,8 @@ exit 1
 # Line above is a shell no-op, and ends a python multi-line comment.
 # The code above runs this file with our preferred python interpreter.
 
+from __future__ import print_function
+
 import os
 import os.path
 import sys

bin/spack.bat

@@ -14,7 +14,7 @@
 ::
 @echo off
 
-set spack="%SPACK_ROOT%"\bin\spack
+set spack=%SPACK_ROOT%\bin\spack
 
 ::#######################################################################
 :: This is a wrapper around the spack command that forwards calls to
@@ -51,43 +51,65 @@ setlocal enabledelayedexpansion
 :: subcommands will never start with '-'
 :: everything after the subcommand is an arg
 
-
+:: we cannot allow batch "for" loop to directly process CL args
+:: a number of batch reserved characters are commonly passed to
+:: spack and allowing batch's "for" method to process the raw inputs
+:: results in a large number of formatting issues
+:: instead, treat the entire CLI as one string
+:: and split by space manually
+:: capture cl args in variable named cl_args
+set cl_args=%*
 :process_cl_args
-rem Set first cl argument (denoted by %1) to be processed
+rem  tokens=1* returns the first processed token produced
-set t=%1
+rem  by tokenizing the input string cl_args on spaces into
-rem shift moves all cl positional arguments left by one
+rem  the named variable %%g
-rem meaning %2 is now %1, this allows us to iterate over each
+rem  While this make look like a for loop, it only
-rem argument
+rem  executes a single time for each of the cl args
-shift
+rem  the actual iterative loop is performed by the
-rem assign next "first" cl argument to cl_args, will be null when
+rem  goto process_cl_args stanza
-rem there are now further arguments to process
+rem  we are simply leveraging the "for" method's string
-set cl_args=%1
+rem  tokenization
-if "!t:~0,1!" == "-" (
+for /f "tokens=1*" %%g in ("%cl_args%") do (
-    if defined _sp_subcommand (
+    set t=%%~g
-        rem  We already have a subcommand, processing args now
+    rem  remainder of string is composed into %%h
+    rem  these are the cl args yet to be processed
+    rem  assign cl_args var to only the args to be processed
+    rem  effectively discarding the current arg %%g
+    rem  this will be nul when we have no further tokens to process
+    set cl_args=%%h
+    rem  process the first space delineated cl arg
+    rem  of this iteration
+    if "!t:~0,1!" == "-" (
+        if defined _sp_subcommand (
+            rem  We already have a subcommand, processing args now
+            if not defined _sp_args (
+                set "_sp_args=!t!"
+            ) else (
+                set "_sp_args=!_sp_args! !t!"
+            )
+        ) else (
+            if not defined _sp_flags (
+                set "_sp_flags=!t!"
+                shift
+            ) else (
+                set "_sp_flags=!_sp_flags! !t!"
+                shift
+            )
+        )
+    ) else if not defined _sp_subcommand (
+        set "_sp_subcommand=!t!"
+        shift
+    ) else (
         if not defined _sp_args (
             set "_sp_args=!t!"
+            shift
         ) else (
             set "_sp_args=!_sp_args! !t!"
+            shift
         )
-    ) else (
-        if not defined _sp_flags (
-            set "_sp_flags=!t!"
-        ) else (
-            set "_sp_flags=!_sp_flags! !t!"
-        )
-    )
-) else if not defined _sp_subcommand (
-    set "_sp_subcommand=!t!"
-) else (
-    if not defined _sp_args (
-        set "_sp_args=!t!"
-    ) else (
-        set "_sp_args=!_sp_args! !t!"
     )
 )
-
+rem  if this is not nil, we have more tokens to process
-rem  if this is not nu;ll, we have more tokens to process
 rem  start above process again with remaining unprocessed cl args
 if defined cl_args goto :process_cl_args
 
@@ -192,7 +214,7 @@ goto :end_switch
 if defined _sp_args (
     if NOT "%_sp_args%"=="%_sp_args:--help=%" (
         goto :default_case
-    ) else if NOT "%_sp_args%"=="%_sp_args:-h=%" (
+    ) else if NOT "%_sp_args%"=="%_sp_args: -h=%" (
         goto :default_case
     ) else if NOT "%_sp_args%"=="%_sp_args:--bat=%" (
         goto :default_case

bin/spack.ps1

@@ -1,146 +0,0 @@
-#  Copyright 2013-2023 Lawrence Livermore National Security, LLC and other
-#  Spack Project Developers. See the top-level COPYRIGHT file for details.
-
-#  SPDX-License-Identifier: (Apache-2.0 OR MIT)
-# #######################################################################
-
-function Compare-CommonArgs {
-    $CMDArgs = $args[0]
-    # These aruments take precedence and call for no futher parsing of arguments
-    # invoke actual Spack entrypoint with that context and exit after
-    "--help", "-h", "--version", "-V" | ForEach-Object {
-        $arg_opt = $_
-        if(($CMDArgs) -and ([bool]($CMDArgs.Where({$_ -eq $arg_opt})))) {
-            return $true
-        }
-    }
-    return $false
-}
-
-function Read-SpackArgs {
-    $SpackCMD_params = @()
-    $SpackSubCommand = $NULL
-    $SpackSubCommandArgs = @()
-    $args_ = $args[0]
-    $args_ | ForEach-Object {
-        if (!$SpackSubCommand) {
-            if($_.SubString(0,1) -eq "-")
-            {
-                $SpackCMD_params += $_
-            }
-            else{
-                $SpackSubCommand = $_
-            }
-        }
-        else{
-            $SpackSubCommandArgs += $_
-        }
-    }
-    return $SpackCMD_params, $SpackSubCommand, $SpackSubCommandArgs
-}
-
-function Set-SpackEnv {
-    # This method is responsible
-    # for processing the return from $(spack <command>)
-    # which are returned as System.Object[]'s containing
-    # a list of env commands
-    # Invoke-Expression can only handle one command at a time
-    # so we iterate over the list to invoke the env modification
-    # expressions one at a time
-    foreach($envop in $args[0]){
-        Invoke-Expression $envop
-    }
-}
-
-
-function Invoke-SpackCD {
-    if (Compare-CommonArgs $SpackSubCommandArgs) {
-        python "$Env:SPACK_ROOT/bin/spack" cd -h
-    }
-    else {
-        $LOC = $(python "$Env:SPACK_ROOT/bin/spack" location $SpackSubCommandArgs)
-        if (($NULL -ne $LOC)){
-            if ( Test-Path -Path $LOC){
-                Set-Location $LOC
-            }
-            else{
-                exit 1
-            }
-        }
-        else {
-            exit 1
-        }
-    }
-}
-
-function Invoke-SpackEnv {
-    if (Compare-CommonArgs $SpackSubCommandArgs[0]) {
-        python "$Env:SPACK_ROOT/bin/spack" env -h
-    }
-    else {
-        $SubCommandSubCommand = $SpackSubCommandArgs[0]
-        $SubCommandSubCommandArgs = $SpackSubCommandArgs[1..$SpackSubCommandArgs.Count]
-        switch ($SubCommandSubCommand) {
-            "activate" {
-                if (Compare-CommonArgs $SubCommandSubCommandArgs) {
-                    python "$Env:SPACK_ROOT/bin/spack" env activate $SubCommandSubCommandArgs
-                }
-                elseif ([bool]($SubCommandSubCommandArgs.Where({$_ -eq "--pwsh"}))) {
-                    python "$Env:SPACK_ROOT/bin/spack" env activate $SubCommandSubCommandArgs
-                }
-                elseif (!$SubCommandSubCommandArgs) {
-                    python "$Env:SPACK_ROOT/bin/spack" env activate $SubCommandSubCommandArgs
-                }
-                else {
-                    $SpackEnv = $(python "$Env:SPACK_ROOT/bin/spack" $SpackCMD_params env activate "--pwsh" $SubCommandSubCommandArgs)
-                    Set-SpackEnv $SpackEnv
-                }
-            }
-            "deactivate" {
-                if ([bool]($SubCommandSubCommandArgs.Where({$_ -eq "--pwsh"}))) {
-                    python"$Env:SPACK_ROOT/bin/spack" env deactivate $SubCommandSubCommandArgs
-                }
-                elseif($SubCommandSubCommandArgs) {
-                    python "$Env:SPACK_ROOT/bin/spack" env deactivate -h
-                }
-                else {
-                    $SpackEnv = $(python "$Env:SPACK_ROOT/bin/spack" $SpackCMD_params env deactivate "--pwsh")
-                    Set-SpackEnv $SpackEnv
-                }
-            }
-            default {python "$Env:SPACK_ROOT/bin/spack" $SpackCMD_params $SpackSubCommand $SpackSubCommandArgs}
-        }
-    }
-}
-
-function Invoke-SpackLoad {
-    if (Compare-CommonArgs $SpackSubCommandArgs) {
-        python "$Env:SPACK_ROOT/bin/spack" $SpackCMD_params $SpackSubCommand $SpackSubCommandArgs
-    }
-    elseif ([bool]($SpackSubCommandArgs.Where({($_ -eq "--pwsh") -or ($_ -eq "--list")}))) {
-        python "$Env:SPACK_ROOT/bin/spack" $SpackCMD_params $SpackSubCommand $SpackSubCommandArgs
-    }
-    else {
-        $SpackEnv = $(python "$Env:SPACK_ROOT/bin/spack" $SpackCMD_params $SpackSubCommand "--pwsh" $SpackSubCommandArgs)
-        Set-SpackEnv $SpackEnv
-    }
-}
-
-
-$SpackCMD_params, $SpackSubCommand, $SpackSubCommandArgs = Read-SpackArgs $args
-
-if (Compare-CommonArgs $SpackCMD_params) {
-    python "$Env:SPACK_ROOT/bin/spack" $SpackCMD_params $SpackSubCommand $SpackSubCommandArgs
-    exit $LASTEXITCODE
-}
-
-# Process Spack commands with special conditions
-# all other commands are piped directly to Spack
-switch($SpackSubCommand)
-{
-    "cd"     {Invoke-SpackCD}
-    "env"    {Invoke-SpackEnv}
-    "load"   {Invoke-SpackLoad}
-    "unload" {Invoke-SpackLoad}
-    default  {python "$Env:SPACK_ROOT/bin/spack" $SpackCMD_params $SpackSubCommand $SpackSubCommandArgs}
-}

etc/spack/defaults/bootstrap.yaml

@@ -9,15 +9,15 @@ bootstrap:
   # may not be able to bootstrap all the software that Spack needs,
   # depending on its type.
   sources:
-  - name: 'github-actions-v0.5'
-    metadata: $spack/share/spack/bootstrap/github-actions-v0.5
   - name: 'github-actions-v0.4'
     metadata: $spack/share/spack/bootstrap/github-actions-v0.4
+  - name: 'github-actions-v0.3'
+    metadata: $spack/share/spack/bootstrap/github-actions-v0.3
   - name: 'spack-install'
     metadata: $spack/share/spack/bootstrap/spack-install
   trusted:
     # By default we trust bootstrapping from sources and from binaries
     # produced on Github via the workflow
-    github-actions-v0.5: true
     github-actions-v0.4: true
+    github-actions-v0.3: true
     spack-install: true

etc/spack/defaults/concretizer.yaml

@@ -36,9 +36,3 @@ concretizer:
   # on each root spec, allowing different versions and variants of the same package in
   # an environment.
   unify: true
-  # Option to deal with possible duplicate nodes (i.e. different nodes from the same package) in the DAG.
-  duplicates:
-    # "none": allows a single node for any package in the DAG.
-    # "minimal": allows the duplication of 'build-tools' nodes only (e.g. py-setuptools, cmake etc.)
-    # "full" (experimental): allows separation of the entire build-tool stack (e.g. the entire "cmake" subDAG)
-    strategy: minimal

etc/spack/defaults/config.yaml

@@ -216,11 +216,10 @@ config:
   # manipulation by unprivileged user (e.g. AFS)
   allow_sgid: true
 
-  # Whether to show status information during building and installing packages.
+  # Whether to set the terminal title to display status information during
-  # This gives information about Spack's current progress as well as the current
+  # building and installing packages. This gives information about Spack's
-  # and total number of packages. Information is shown both in the terminal
+  # current progress as well as the current and total number of packages.
-  # title and inline.
+  terminal_title: false
-  install_status: true
 
   # Number of seconds a buildcache's index.json is cached locally before probing
   # for updates, within a single Spack invocation. Defaults to 10 minutes.
@@ -229,11 +228,3 @@ config:
   flags:
     # Whether to keep -Werror flags active in package builds.
     keep_werror: 'none'
-
-  # A mapping of aliases that can be used to define new commands. For instance,
-  # `sp: spec -I` will define a new command `sp` that will execute `spec` with
-  # the `-I` argument. Aliases cannot override existing commands.
-  aliases:
-    concretise: concretize
-    containerise: containerize
-    rm: remove

etc/spack/defaults/darwin/packages.yaml

@@ -50,4 +50,4 @@ packages:
     # Apple bundles libuuid in libsystem_c version 1353.100.2,
     # although the version number used here isn't critical
     - spec: apple-libuuid@1353.100.2
-      prefix: /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk
+      prefix: /Applications/Xcode.app/Contents/Developer/Platforms/MacOSX.platform/Developer/SDKs/MacOSX.sdk

etc/spack/defaults/mirrors.yaml

@@ -1,4 +1,2 @@
 mirrors:
-  spack-public:
+  spack-public: https://mirror.spack.io
-    binary: false
-    url: https://mirror.spack.io

etc/spack/defaults/packages.yaml

@@ -49,7 +49,6 @@ packages:
       pbs: [openpbs, torque]
       pil: [py-pillow]
       pkgconfig: [pkgconf, pkg-config]
-      qmake: [qt-base, qt]
       rpc: [libtirpc]
       scalapack: [netlib-scalapack, amdscalapack]
       sycl: [hipsycl]
@@ -60,7 +59,6 @@ packages:
       xxd: [xxd-standalone, vim]
       yacc: [bison, byacc]
       ziglang: [zig]
-      zlib-api: [zlib-ng+compat, zlib]
     permissions:
       read: world
       write: user

lib/spack/docs/.gitignore

@@ -1,3 +1,4 @@
+package_list.html
 command_index.rst
 spack*.rst
 llnl*.rst

lib/spack/docs/_pygments/style.py

@@ -1,16 +0,0 @@
-# Copyright 2013-2023 Lawrence Livermore National Security, LLC and other
-# Spack Project Developers. See the top-level COPYRIGHT file for details.
-#
-# SPDX-License-Identifier: (Apache-2.0 OR MIT)
-
-# The name of the Pygments (syntax highlighting) style to use.
-# We use our own extension of the default style with a few modifications
-from pygments.styles.default import DefaultStyle
-from pygments.token import Generic
-
-
-class SpackStyle(DefaultStyle):
-    styles = DefaultStyle.styles.copy()
-    background_color = "#f4f4f8"
-    styles[Generic.Output] = "#355"
-    styles[Generic.Prompt] = "bold #346ec9"

lib/spack/docs/basic_usage.rst

@@ -45,8 +45,7 @@ Listing available packages
 
 To install software with Spack, you need to know what software is
 available.  You can see a list of available package names at the
-`packages.spack.io <https://packages.spack.io>`_ website, or
+:ref:`package-list` webpage, or using the ``spack list`` command.
-using the ``spack list`` command.
 
 .. _cmd-spack-list:
 
@@ -61,7 +60,7 @@ can install:
    :ellipsis: 10
 
 There are thousands of them, so we've truncated the output above, but you
-can find a `full list here <https://packages.spack.io>`_.
+can find a :ref:`full list here <package-list>`.
 Packages are listed by name in alphabetical order.
 A pattern to match with no wildcards, ``*`` or ``?``,
 will be treated as though it started and ended with
@@ -1526,30 +1525,6 @@ any MPI implementation will do.  If another package depends on
 error.  Likewise, if you try to plug in some package that doesn't
 provide MPI, Spack will raise an error.
 
-^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
-Explicit binding of virtual dependencies
-^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
-
-There are packages that provide more than just one virtual dependency. When interacting with them, users
-might want to utilize just a subset of what they could provide, and use other providers for virtuals they
-need.
-
-It is possible to be more explicit and tell Spack which dependency should provide which virtual, using a
-special syntax:
-
-.. code-block:: console
-
-   $ spack spec strumpack ^[virtuals=mpi] intel-parallel-studio+mkl ^[virtuals=lapack] openblas
-
-Concretizing the spec above produces the following DAG:
-
-.. figure:: images/strumpack_virtuals.svg
-   :scale: 60 %
-   :align: center
-
-where ``intel-parallel-studio`` *could* provide ``mpi``, ``lapack``, and ``blas`` but is used only for the former. The ``lapack``
-and ``blas`` dependencies are satisfied by ``openblas``.
-
 ^^^^^^^^^^^^^^^^^^^^^^^^
 Specifying Specs by Hash
 ^^^^^^^^^^^^^^^^^^^^^^^^

lib/spack/docs/binary_caches.rst

@@ -48,10 +48,14 @@ Here is an example where a build cache is created in a local directory named
 
 .. code-block:: console
 
-    $ spack buildcache push ./spack-cache ninja
+    $ spack buildcache push --allow-root ./spack-cache ninja
     ==> Pushing binary packages to file:///home/spackuser/spack/spack-cache/build_cache
 
-Note that ``ninja`` must be installed locally for this to work.
+Not that ``ninja`` must be installed locally for this to work.
+
+We're using the ``--allow-root`` flag to tell Spack that is OK when any of
+the binaries we're pushing contain references to the local Spack install
+directory.
 
 Once you have a build cache, you can add it as a mirror, discussed next.
 
@@ -143,7 +147,7 @@ and then install from it exclusively, you would do:
 
     $ spack mirror add E4S https://cache.e4s.io
     $ spack buildcache keys --install --trust
-    $ spack install --use-buildcache only <package>
+    $ spack install --use-buildache only <package>
 
 We use ``--install`` and ``--trust`` to say that we are installing keys to our
 keyring, and trusting all downloaded keys.
@@ -155,183 +159,16 @@ List of popular build caches
 
 * `Extreme-scale Scientific Software Stack (E4S) <https://e4s-project.github.io/>`_: `build cache <https://oaciss.uoregon.edu/e4s/inventory.html>`_
 
+
 ----------
 Relocation
 ----------
 
-When using buildcaches across different machines, it is likely that the install
+Initial build and later installation do not necessarily happen at the same
-root will be different from the one used to build the binaries.
+location. Spack provides a relocation capability and corrects for RPATHs and
-
+non-relocatable scripts. However, many packages compile paths into binary
-To address this issue, Spack automatically relocates all paths encoded in binaries
+artifacts directly. In such cases, the build instructions of this package would
-and scripts to their new location upon install.
+need to be adjusted for better re-locatability.
-
-Note that there are some cases where this is not possible: if binaries are built in
-a relatively short path, and then installed to a longer path, there may not be enough
-space in the binary to encode the new path. In this case, Spack will fail to install
-the package from the build cache, and a source build is required.
-
-To reduce the likelihood of this happening, it is highly recommended to add padding to
-the install root during the build, as specified in the :ref:`config <config-yaml>`
-section of the configuration:
-
-.. code-block:: yaml
-
-   config:
-     install_tree:
-       root: /opt/spack
-       padded_length: 128
-
-
-.. _binary_caches_oci:
-
------------------------------------------
-OCI / Docker V2 registries as build cache
------------------------------------------
-
-Spack can also use OCI or Docker V2 registries such as Dockerhub, Quay.io,
-Github Packages, GitLab Container Registry, JFrog Artifactory, and others
-as build caches. This is a convenient way to share binaries using public
-infrastructure, or to cache Spack built binaries in Github Actions and
-GitLab CI.
-
-To get started, configure an OCI mirror using ``oci://`` as the scheme,
-and optionally specify a username and password (or personal access token):
-
-.. code-block:: console
-
-    $ spack mirror add --oci-username username --oci-password password my_registry oci://example.com/my_image
-
-Spack follows the naming conventions of Docker, with Dockerhub as the default
-registry. To use Dockerhub, you can omit the registry domain:
-
-.. code-block:: console
-
-    $ spack mirror add --oci-username username --oci-password password my_registry oci://username/my_image
-
-From here, you can use the mirror as any other build cache:
-
-.. code-block:: console
-
-    $ spack buildcache push my_registry <specs...>  # push to the registry
-    $ spack install <specs...> # install from the registry
-
-A unique feature of buildcaches on top of OCI registries is that it's incredibly
-easy to generate get a runnable container image with the binaries installed. This
-is a great way to make applications available to users without requiring them to
-install Spack -- all you need is Docker, Podman or any other OCI-compatible container
-runtime.
-
-To produce container images, all you need to do is add the ``--base-image`` flag
-when pushing to the build cache:
-
-.. code-block:: console
-
-    $ spack buildcache push --base-image ubuntu:20.04 my_registry ninja
-    Pushed to example.com/my_image:ninja-1.11.1-yxferyhmrjkosgta5ei6b4lqf6bxbscz.spack
-
-    $ docker run -it example.com/my_image:ninja-1.11.1-yxferyhmrjkosgta5ei6b4lqf6bxbscz.spack
-    root@e4c2b6f6b3f4:/# ninja --version
-    1.11.1
-
-If ``--base-image`` is not specified, distroless images are produced. In practice,
-you won't be able to run these as containers, since they don't come with libc and
-other system dependencies. However, they are still compatible with tools like
-``skopeo``, ``podman``, and ``docker`` for pulling and pushing.
-
-.. note::
-    The docker ``overlayfs2`` storage driver is limited to 128 layers, above which a
-    ``max depth exceeded`` error may be produced when pulling the image. There
-    are `alternative drivers <https://docs.docker.com/storage/storagedriver/>`_.
-
-------------------------------------
-Spack build cache for GitHub Actions
-------------------------------------
-
-To significantly speed up Spack in GitHub Actions, binaries can be cached in
-GitHub Packages. This service is an OCI registry that can be linked to a GitHub
-repository.
-
-A typical workflow is to include a ``spack.yaml`` environment in your repository
-that specifies the packages to install, the target architecture, and the build
-cache to use under ``mirrors``:
-
-.. code-block:: yaml
-
-    spack:
-      specs:
-      - python@3.11
-      config:
-        install_tree:
-          root: /opt/spack
-          padded_length: 128
-      packages:
-        all:
-          require: target=x86_64_v2
-      mirrors:
-        local-buildcache: oci://ghcr.io/<organization>/<repository>
-
-A GitHub action can then be used to install the packages and push them to the
-build cache:
-
-.. code-block:: yaml
-
-    name: Install Spack packages
-
-    on: push
-
-    env:
-      SPACK_COLOR: always
-
-    jobs:
-      example:
-        runs-on: ubuntu-22.04
-        permissions:
-          packages: write
-        steps:
-        - name: Checkout
-          uses: actions/checkout@v3
-
-        - name: Checkout Spack
-          uses: actions/checkout@v3
-          with:
-            repository: spack/spack
-            path: spack
-
-        - name: Setup Spack
-          run: echo "$PWD/spack/bin" >> "$GITHUB_PATH"
-
-        - name: Concretize
-          run: spack -e . concretize
-
-        - name: Install
-          run: spack -e . install --no-check-signature
-
-        - name: Run tests
-            run: ./my_view/bin/python3 -c 'print("hello world")'
-
-        - name: Push to buildcache
-          run: |
-            spack -e . mirror set --oci-username ${{ github.actor }} --oci-password "${{ secrets.GITHUB_TOKEN }}" local-buildcache
-            spack -e . buildcache push --base-image ubuntu:22.04 --unsigned --update-index local-buildcache
-          if: ${{ !cancelled() }}
-
-The first time this action runs, it will build the packages from source and
-push them to the build cache. Subsequent runs will pull the binaries from the
-build cache. The concretizer will ensure that prebuilt binaries are favored
-over source builds.
-
-The build cache entries appear in the GitHub Packages section of your repository,
-and contain instructions for pulling and running them with ``docker`` or ``podman``.
-
-
-^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
-Using Spack's public build cache for GitHub Actions
-^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
-
-Spack offers a public build cache for GitHub Actions with a set of common packages,
-which lets you get started quickly. See the following resources for more information:
-
-* `spack/github-actions-buildcache <https://github.com/spack/github-actions-buildcache>`_
 
 .. _cmd-spack-buildcache:
 

lib/spack/docs/bootstrapping.rst

@@ -32,14 +32,9 @@ can't be found. You can readily check if any prerequisite for using Spack is mis
 
    Spack will take care of bootstrapping any missing dependency marked as [B]. Dependencies marked as [-] are instead required to be found on the system.
 
-   % echo $?
-   1
-
 In the case of the output shown above Spack detected that both ``clingo`` and ``gnupg``
 are missing and it's giving detailed information on why they are needed and whether
-they can be bootstrapped. The return code of this command summarizes the results, if any
+they can be bootstrapped. Running a command that concretize a spec, like:
-dependencies are missing the return code is ``1``, otherwise ``0``. Running a command that
-concretizes a spec, like:
 
 .. code-block:: console
 
@@ -49,7 +44,7 @@ concretizes a spec, like:
    ==> Installing "clingo-bootstrap@spack%apple-clang@12.0.0~docs~ipo+python build_type=Release arch=darwin-catalina-x86_64" from a buildcache
    [ ... ]
 
-automatically triggers the bootstrapping of clingo from pre-built binaries as expected.
+triggers the bootstrapping of clingo from pre-built binaries as expected.
 
 Users can also bootstrap all the dependencies needed by Spack in a single command, which
 might be useful to setup containers or other similar environments:

lib/spack/docs/build_settings.rst

@@ -3,23 +3,251 @@
 
    SPDX-License-Identifier: (Apache-2.0 OR MIT)
 
+.. _build-settings:
+
+================================
+Package Settings (packages.yaml)
+================================
+
+Spack allows you to customize how your software is built through the
+``packages.yaml`` file.  Using it, you can make Spack prefer particular
+implementations of virtual dependencies (e.g., MPI or BLAS/LAPACK),
+or you can make it prefer to build with particular compilers.  You can
+also tell Spack to use *external* software installations already
+present on your system.
+
+At a high level, the ``packages.yaml`` file is structured like this:
+
+.. code-block:: yaml
+
+   packages:
+     package1:
+       # settings for package1
+     package2:
+       # settings for package2
+     # ...
+     all:
+       # settings that apply to all packages.
+
+So you can either set build preferences specifically for *one* package,
+or you can specify that certain settings should apply to *all* packages.
+The types of settings you can customize are described in detail below.
+
+Spack's build defaults are in the default
+``etc/spack/defaults/packages.yaml`` file.  You can override them in
+``~/.spack/packages.yaml`` or ``etc/spack/packages.yaml``. For more
+details on how this works, see :ref:`configuration-scopes`.
+
+.. _sec-external-packages:
+
+-----------------
+External Packages
+-----------------
+
+Spack can be configured to use externally-installed
+packages rather than building its own packages. This may be desirable
+if machines ship with system packages, such as a customized MPI
+that should be used instead of Spack building its own MPI.
+
+External packages are configured through the ``packages.yaml`` file.
+Here's an example of an external configuration:
+
+.. code-block:: yaml
+
+   packages:
+     openmpi:
+       externals:
+       - spec: "openmpi@1.4.3%gcc@4.4.7 arch=linux-debian7-x86_64"
+         prefix: /opt/openmpi-1.4.3
+       - spec: "openmpi@1.4.3%gcc@4.4.7 arch=linux-debian7-x86_64+debug"
+         prefix: /opt/openmpi-1.4.3-debug
+       - spec: "openmpi@1.6.5%intel@10.1 arch=linux-debian7-x86_64"
+         prefix: /opt/openmpi-1.6.5-intel
+
+This example lists three installations of OpenMPI, one built with GCC,
+one built with GCC and debug information, and another built with Intel.
+If Spack is asked to build a package that uses one of these MPIs as a
+dependency, it will use the pre-installed OpenMPI in
+the given directory. Note that the specified path is the top-level
+install prefix, not the ``bin`` subdirectory.
+
+``packages.yaml`` can also be used to specify modules to load instead
+of the installation prefixes.  The following example says that module
+``CMake/3.7.2`` provides cmake version 3.7.2.
+
+.. code-block:: yaml
+
+   cmake:
+     externals:
+     - spec: cmake@3.7.2
+       modules:
+       - CMake/3.7.2
+
+Each ``packages.yaml`` begins with a ``packages:`` attribute, followed
+by a list of package names.  To specify externals, add an ``externals:``
+attribute under the package name, which lists externals.
+Each external should specify a ``spec:`` string that should be as
+well-defined as reasonably possible.  If a
+package lacks a spec component, such as missing a compiler or
+package version, then Spack will guess the missing component based
+on its most-favored packages, and it may guess incorrectly.
+
+Each package version and compiler listed in an external should
+have entries in Spack's packages and compiler configuration, even
+though the package and compiler may not ever be built.
+
+^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
+Prevent packages from being built from sources
+^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
+
+Adding an external spec in ``packages.yaml`` allows Spack to use an external location,
+but it does not prevent Spack from building packages from sources. In the above example,
+Spack might choose for many valid reasons to start building and linking with the
+latest version of OpenMPI rather than continue using the pre-installed OpenMPI versions.
+
+To prevent this, the ``packages.yaml`` configuration also allows packages
+to be flagged as non-buildable.  The previous example could be modified to
+be:
+
+.. code-block:: yaml
+
+   packages:
+     openmpi:
+       externals:
+       - spec: "openmpi@1.4.3%gcc@4.4.7 arch=linux-debian7-x86_64"
+         prefix: /opt/openmpi-1.4.3
+       - spec: "openmpi@1.4.3%gcc@4.4.7 arch=linux-debian7-x86_64+debug"
+         prefix: /opt/openmpi-1.4.3-debug
+       - spec: "openmpi@1.6.5%intel@10.1 arch=linux-debian7-x86_64"
+         prefix: /opt/openmpi-1.6.5-intel
+       buildable: False
+
+The addition of the ``buildable`` flag tells Spack that it should never build
+its own version of OpenMPI from sources, and it will instead always rely on a pre-built
+OpenMPI.
+
+.. note::
+
+   If ``concretizer:reuse`` is on (see :ref:`concretizer-options` for more information on that flag)
+   pre-built specs include specs already available from a local store, an upstream store, a registered
+   buildcache or specs marked as externals in ``packages.yaml``. If ``concretizer:reuse`` is off, only
+   external specs in ``packages.yaml`` are included in the list of pre-built specs.
+
+If an external module is specified as not buildable, then Spack will load the
+external module into the build environment which can be used for linking.
+
+The ``buildable`` does not need to be paired with external packages.
+It could also be used alone to forbid packages that may be
+buggy or otherwise undesirable.
+
+^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
+Non-buildable virtual packages
+^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
+
+Virtual packages in Spack can also be specified as not buildable, and
+external implementations can be provided. In the example above,
+OpenMPI is configured as not buildable, but Spack will often prefer
+other MPI implementations over the externally available OpenMPI. Spack
+can be configured with every MPI provider not buildable individually,
+but more conveniently:
+
+.. code-block:: yaml
+
+   packages:
+     mpi:
+       buildable: False
+     openmpi:
+       externals:
+       - spec: "openmpi@1.4.3%gcc@4.4.7 arch=linux-debian7-x86_64"
+         prefix: /opt/openmpi-1.4.3
+       - spec: "openmpi@1.4.3%gcc@4.4.7 arch=linux-debian7-x86_64+debug"
+         prefix: /opt/openmpi-1.4.3-debug
+       - spec: "openmpi@1.6.5%intel@10.1 arch=linux-debian7-x86_64"
+         prefix: /opt/openmpi-1.6.5-intel
+
+Spack can then use any of the listed external implementations of MPI
+to satisfy a dependency, and will choose depending on the compiler and
+architecture.
+
+In cases where the concretizer is configured to reuse specs, and other ``mpi`` providers
+(available via stores or buildcaches) are not wanted, Spack can be configured to require
+specs matching only the available externals:
+
+.. code-block:: yaml
+
+   packages:
+     mpi:
+       buildable: False
+       require:
+       - one_of: [
+           "openmpi@1.4.3%gcc@4.4.7 arch=linux-debian7-x86_64",
+           "openmpi@1.4.3%gcc@4.4.7 arch=linux-debian7-x86_64+debug",
+           "openmpi@1.6.5%intel@10.1 arch=linux-debian7-x86_64"
+         ]
+     openmpi:
+       externals:
+       - spec: "openmpi@1.4.3%gcc@4.4.7 arch=linux-debian7-x86_64"
+         prefix: /opt/openmpi-1.4.3
+       - spec: "openmpi@1.4.3%gcc@4.4.7 arch=linux-debian7-x86_64+debug"
+         prefix: /opt/openmpi-1.4.3-debug
+       - spec: "openmpi@1.6.5%intel@10.1 arch=linux-debian7-x86_64"
+         prefix: /opt/openmpi-1.6.5-intel
+
+This configuration prevents any spec using MPI and originating from stores or buildcaches to be reused,
+unless it matches the requirements under ``packages:mpi:require``. For more information on requirements see
+:ref:`package-requirements`.
+
+.. _cmd-spack-external-find:
+
+^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
+Automatically Find External Packages
+^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
+
+You can run the :ref:`spack external find <spack-external-find>` command
+to search for system-provided packages and add them to ``packages.yaml``.
+After running this command your ``packages.yaml`` may include new entries:
+
+.. code-block:: yaml
+
+   packages:
+     cmake:
+       externals:
+       - spec: cmake@3.17.2
+         prefix: /usr
+
+Generally this is useful for detecting a small set of commonly-used packages;
+for now this is generally limited to finding build-only dependencies.
+Specific limitations include:
+
+* Packages are not discoverable by default: For a package to be
+  discoverable with ``spack external find``, it needs to add special
+  logic. See :ref:`here <make-package-findable>` for more details.
+* The logic does not search through module files, it can only detect
+  packages with executables defined in ``PATH``; you can help Spack locate
+  externals which use module files by loading any associated modules for
+  packages that you want Spack to know about before running
+  ``spack external find``.
+* Spack does not overwrite existing entries in the package configuration:
+  If there is an external defined for a spec at any configuration scope,
+  then Spack will not add a new external entry (``spack config blame packages``
+  can help locate all external entries).
 
 .. _concretizer-options:
 
-==========================================
+----------------------
-Concretization Settings (concretizer.yaml)
+Concretizer options
-==========================================
+----------------------
 
-The ``concretizer.yaml`` configuration file allows to customize aspects of the
+``packages.yaml`` gives the concretizer preferences for specific packages,
-algorithm used to select the dependencies you install. The default configuration
+but you can also use ``concretizer.yaml`` to customize aspects of the
-is the following:
+algorithm it uses to select the dependencies you install:
 
 .. literalinclude:: _spack_root/etc/spack/defaults/concretizer.yaml
    :language: yaml
 
---------------------------------
+^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
 Reuse already installed packages
---------------------------------
+^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
 
 The ``reuse`` attribute controls whether Spack will prefer to use installed packages (``true``), or
 whether it will do a "fresh" installation and prefer the latest settings from
@@ -37,15 +265,11 @@ to enable reuse for a single installation, and you can use:
    spack install --fresh <spec>
 
 to do a fresh install if ``reuse`` is enabled by default.
-``reuse: dependencies`` is the default.
+``reuse: true`` is the default.
 
-.. seealso::
+^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
-
-   FAQ: :ref:`Why does Spack pick particular versions and variants? <faq-concretizer-precedence>`
-
-------------------------------------------
 Selection of the target microarchitectures
-------------------------------------------
+^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
 
 The options under the ``targets`` attribute control which targets are considered during a solve.
 Currently the options in this section are only configurable from the ``concretizer.yaml`` file
@@ -78,28 +302,321 @@ microarchitectures considered during the solve are constrained to be compatible
 host Spack is currently running on. For instance, if this option is set to ``true``, a
 user cannot concretize for ``target=icelake`` while running on an Haswell node.
 
----------------
+.. _package-requirements:
-Duplicate nodes
----------------
 
-The ``duplicates`` attribute controls whether the DAG can contain multiple configurations of
+--------------------
-the same package. This is mainly relevant for build dependencies, which may have their version
+Package Requirements
-pinned by some nodes, and thus be required at different versions by different nodes in the same
+--------------------
-DAG.
 
-The ``strategy`` option controls how the solver deals with duplicates. If the value is ``none``,
+Spack can be configured to always use certain compilers, package
-then a single configuration per package is allowed in the DAG. This means, for instance, that only
+versions, and variants during concretization through package
-a single ``cmake`` or a single ``py-setuptools`` version is allowed. The result would be a slightly
+requirements.
-faster concretization, at the expense of making a few specs unsolvable.
 
-If the value is ``minimal`` Spack will allow packages tagged as ``build-tools`` to have duplicates.
+Package requirements are useful when you find yourself repeatedly
-This allows, for instance, to concretize specs whose nodes require different, and incompatible, ranges
+specifying the same constraints on the command line, and wish that
-of some build tool. For instance, in the figure below the latest `py-shapely` requires a newer `py-setuptools`,
+Spack respects these constraints whether you mention them explicitly
-while `py-numpy` still needs an older version:
+or not. Another use case is specifying constraints that should apply
+to all root specs in an environment, without having to repeat the
+constraint everywhere.
 
-.. figure::  images/shapely_duplicates.svg
+Apart from that, requirements config is more flexible than constraints
-   :scale: 70 %
+on the command line, because it can specify constraints on packages
-   :align: center
+*when they occur* as a dependency. In contrast, on the command line it
+is not possible to specify constraints on dependencies while also keeping
+those dependencies optional.
 
-Up to Spack v0.20 ``duplicates:strategy:none`` was the default (and only) behavior. From Spack v0.21 the
+^^^^^^^^^^^^^^^^^^^
-default behavior is ``duplicates:strategy:minimal``.
+Requirements syntax
+^^^^^^^^^^^^^^^^^^^
+
+The package requirements configuration is specified in ``packages.yaml``,
+keyed by package name and expressed using the Spec syntax. In the simplest
+case you can specify attributes that you always want the package to have
+by providing a single spec string to ``require``:
+
+.. code-block:: yaml
+
+   packages:
+     libfabric:
+       require: "@1.13.2"
+
+In the above example, ``libfabric`` will always build with version 1.13.2. If you
+need to compose multiple configuration scopes ``require`` accepts a list of
+strings:
+
+.. code-block:: yaml
+
+   packages:
+     libfabric:
+       require:
+       - "@1.13.2"
+       - "%gcc"
+
+In this case ``libfabric`` will always build with version 1.13.2 **and** using GCC
+as a compiler.
+
+For more complex use cases, require accepts also a list of objects. These objects
+must have either a ``any_of`` or a ``one_of`` field, containing a list of spec strings,
+and they can optionally have a ``when`` and a ``message`` attribute:
+
+.. code-block:: yaml
+
+   packages:
+     openmpi:
+       require:
+       - any_of: ["@4.1.5", "%gcc"]
+         message: "in this example only 4.1.5 can build with other compilers"
+
+``any_of`` is a list of specs. One of those specs must be satisfied
+and it is also allowed for the concretized spec to match more than one.
+In the above example, that means you could build ``openmpi@4.1.5%gcc``,
+``openmpi@4.1.5%clang`` or ``openmpi@3.9%gcc``, but
+not ``openmpi@3.9%clang``.
+
+If a custom message is provided, and the requirement is not satisfiable,
+Spack will print the custom error message:
+
+.. code-block:: console
+
+   $ spack spec openmpi@3.9%clang
+   ==> Error: in this example only 4.1.5 can build with other compilers
+
+We could express a similar requirement using the ``when`` attribute:
+
+.. code-block:: yaml
+
+   packages:
+     openmpi:
+       require:
+       - any_of: ["%gcc"]
+         when: "@:4.1.4"
+         message: "in this example only 4.1.5 can build with other compilers"
+
+In the example above, if the version turns out to be 4.1.4 or less, we require the compiler to be GCC.
+For readability, Spack also allows a ``spec`` key accepting a string when there is only a single
+constraint:
+
+.. code-block:: yaml
+
+   packages:
+     openmpi:
+       require:
+       - spec: "%gcc"
+         when: "@:4.1.4"
+         message: "in this example only 4.1.5 can build with other compilers"
+
+This code snippet and the one before it are semantically equivalent.
+
+Finally, instead of ``any_of`` you can use ``one_of`` which also takes a list of specs. The final
+concretized spec must match one and only one of them:
+
+.. code-block:: yaml
+
+   packages:
+     mpich:
+       require:
+       - one_of: ["+cuda", "+rocm"]
+
+In the example above, that means you could build ``mpich+cuda`` or ``mpich+rocm`` but not ``mpich+cuda+rocm``.
+
+.. note::
+
+   For ``any_of`` and ``one_of``, the order of specs indicates a
+   preference: items that appear earlier in the list are preferred
+   (note that these preferences can be ignored in favor of others).
+
+.. note::
+
+   When using a conditional requirement, Spack is allowed to actively avoid the triggering
+   condition (the ``when=...`` spec) if that leads to a concrete spec with better scores in
+   the optimization criteria. To check the current optimization criteria and their
+   priorities you can run ``spack solve zlib``.
+
+^^^^^^^^^^^^^^^^^^^^^^^^^^^^
+Setting default requirements
+^^^^^^^^^^^^^^^^^^^^^^^^^^^^
+
+You can also set default requirements for all packages under ``all``
+like this:
+
+.. code-block:: yaml
+
+   packages:
+     all:
+       require: '%clang'
+
+which means every spec will be required to use ``clang`` as a compiler.
+
+Note that in this case ``all`` represents a *default set of requirements* -
+if there are specific package requirements, then the default requirements
+under ``all`` are disregarded. For example, with a configuration like this:
+
+.. code-block:: yaml
+
+   packages:
+     all:
+       require: '%clang'
+     cmake:
+       require: '%gcc'
+
+Spack requires ``cmake`` to use ``gcc`` and all other nodes (including ``cmake``
+dependencies) to use ``clang``.
+
+^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
+Setting requirements on virtual specs
+^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
+
+A requirement on a virtual spec applies whenever that virtual is present in the DAG.
+This can be useful for fixing which virtual provider you want to use:
+
+.. code-block:: yaml
+
+   packages:
+     mpi:
+       require: 'mvapich2 %gcc'
+
+With the configuration above the only allowed ``mpi`` provider is ``mvapich2 %gcc``.
+
+Requirements on the virtual spec and on the specific provider are both applied, if
+present. For instance with a configuration like:
+
+.. code-block:: yaml
+
+   packages:
+     mpi:
+       require: 'mvapich2 %gcc'
+     mvapich2:
+       require: '~cuda'
+
+you will use ``mvapich2~cuda %gcc`` as an ``mpi`` provider.
+
+.. _package-preferences:
+
+-------------------
+Package Preferences
+-------------------
+
+In some cases package requirements can be too strong, and package
+preferences are the better option. Package preferences do not impose
+constraints on packages for particular versions or variants values,
+they rather only set defaults -- the concretizer is free to change
+them if it must due to other constraints. Also note that package
+preferences are of lower priority than reuse of already installed
+packages.
+
+Here's an example ``packages.yaml`` file that sets preferred packages:
+
+.. code-block:: yaml
+
+   packages:
+     opencv:
+       compiler: [gcc@4.9]
+       variants: +debug
+     gperftools:
+       version: [2.2, 2.4, 2.3]
+     all:
+       compiler: [gcc@4.4.7, 'gcc@4.6:', intel, clang, pgi]
+       target: [sandybridge]
+       providers:
+         mpi: [mvapich2, mpich, openmpi]
+
+At a high level, this example is specifying how packages are preferably
+concretized.  The opencv package should prefer using GCC 4.9 and
+be built with debug options.  The gperftools package should prefer version
+2.2 over 2.4.  Every package on the system should prefer mvapich2 for
+its MPI and GCC 4.4.7 (except for opencv, which overrides this by preferring GCC 4.9).
+These options are used to fill in implicit defaults.  Any of them can be overwritten
+on the command line if explicitly requested.
+
+Package preferences accept the follow keys or components under
+the specific package (or ``all``) section: ``compiler``, ``variants``,
+``version``, ``providers``, and ``target``.  Each component has an
+ordered list of spec ``constraints``, with earlier entries in the
+list being preferred over later entries.
+
+Sometimes a package installation may have constraints that forbid
+the first concretization rule, in which case Spack will use the first
+legal concretization rule.  Going back to the example, if a user
+requests gperftools 2.3 or later, then Spack will install version 2.4
+as the 2.4 version of gperftools is preferred over 2.3.
+
+An explicit concretization rule in the preferred section will always
+take preference over unlisted concretizations.  In the above example,
+xlc isn't listed in the compiler list.  Every listed compiler from
+gcc to pgi will thus be preferred over the xlc compiler.
+
+The syntax for the ``provider`` section differs slightly from other
+concretization rules.  A provider lists a value that packages may
+``depends_on`` (e.g, MPI) and a list of rules for fulfilling that
+dependency.
+
+.. _package_permissions:
+
+-------------------
+Package Permissions
+-------------------
+
+Spack can be configured to assign permissions to the files installed
+by a package.
+
+In the ``packages.yaml`` file under ``permissions``, the attributes
+``read``, ``write``, and ``group`` control the package
+permissions. These attributes can be set per-package, or for all
+packages under ``all``. If permissions are set under ``all`` and for a
+specific package, the package-specific settings take precedence.
+
+The ``read`` and ``write`` attributes take one of ``user``, ``group``,
+and ``world``.
+
+.. code-block:: yaml
+
+  packages:
+    all:
+      permissions:
+        write: group
+        group: spack
+    my_app:
+      permissions:
+        read: group
+        group: my_team
+
+The permissions settings describe the broadest level of access to
+installations of the specified packages. The execute permissions of
+the file are set to the same level as read permissions for those files
+that are executable. The default setting for ``read`` is ``world``,
+and for ``write`` is ``user``. In the example above, installations of
+``my_app`` will be installed with user and group permissions but no
+world permissions, and owned by the group ``my_team``. All other
+packages will be installed with user and group write privileges, and
+world read privileges. Those packages will be owned by the group
+``spack``.
+
+The ``group`` attribute assigns a Unix-style group to a package. All
+files installed by the package will be owned by the assigned group,
+and the sticky group bit will be set on the install prefix and all
+directories inside the install prefix. This will ensure that even
+manually placed files within the install prefix are owned by the
+assigned group. If no group is assigned, Spack will allow the OS
+default behavior to go as expected.
+
+----------------------------
+Assigning Package Attributes
+----------------------------
+
+You can assign class-level attributes in the configuration:
+
+.. code-block:: yaml
+
+  packages:
+    mpileaks:
+      # Override existing attributes
+      url: http://www.somewhereelse.com/mpileaks-1.0.tar.gz
+      # ... or add new ones
+      x: 1
+
+Attributes set this way will be accessible to any method executed
+in the package.py file (e.g. the ``install()`` method). Values for these
+attributes may be any value parseable by yaml.
+
+These can only be applied to specific packages, not "all" or
+virtual packages.

lib/spack/docs/build_systems/autotoolspackage.rst

@@ -127,9 +127,9 @@ check out a commit from the ``master`` branch, you would want to add:
 
 .. code-block:: python
 
-   depends_on("autoconf", type="build", when="@master")
+   depends_on('autoconf', type='build', when='@master')
-   depends_on("automake", type="build", when="@master")
+   depends_on('automake', type='build', when='@master')
-   depends_on("libtool",  type="build", when="@master")
+   depends_on('libtool',  type='build', when='@master')
 
 It is typically redundant to list the ``m4`` macro processor package as a
 dependency, since ``autoconf`` already depends on it.
@@ -145,7 +145,7 @@ example, the ``bash`` shell is used to run the ``autogen.sh`` script.
 .. code-block:: python
 
    def autoreconf(self, spec, prefix):
-       which("bash")("autogen.sh")
+       which('bash')('autogen.sh')
 
 """""""""""""""""""""""""""""""""""""""
 patching configure or Makefile.in files
@@ -186,9 +186,9 @@ To opt out of this feature, use the following setting:
 To enable it conditionally on different architectures, define a property and
 make the package depend on ``gnuconfig`` as a build dependency:
 
-.. code-block:: python
+.. code-block
 
-   depends_on("gnuconfig", when="@1.0:")
+   depends_on('gnuconfig', when='@1.0:')
 
    @property
    def patch_config_files(self):
@@ -230,7 +230,7 @@ version, this can be done like so:
 
    @property
    def force_autoreconf(self):
-       return self.version == Version("1.2.3")
+       return self.version == Version('1.2.3')
 
 ^^^^^^^^^^^^^^^^^^^^^^^
 Finding configure flags
@@ -278,22 +278,13 @@ function like so:
    def configure_args(self):
        args = []
 
-       if self.spec.satisfies("+mpi"):
+       if '+mpi' in self.spec:
-           args.append("--enable-mpi")
+           args.append('--enable-mpi')
        else:
-           args.append("--disable-mpi")
+           args.append('--disable-mpi')
 
        return args
 
-
-Alternatively, you can use the :ref:`enable_or_disable  <autotools_enable_or_disable>` helper:
-
-.. code-block:: python
-
-   def configure_args(self):
-       return [self.enable_or_disable("mpi")]
-
-
 Note that we are explicitly disabling MPI support if it is not
 requested. This is important, as many Autotools packages will enable
 options by default if the dependencies are found, and disable them
@@ -304,11 +295,9 @@ and `here <https://wiki.gentoo.org/wiki/Project:Quality_Assurance/Automagic_depe
 for a rationale as to why these so-called "automagic" dependencies
 are a problem.
 
-.. note::
+By default, Autotools installs packages to ``/usr``. We don't want this,
-
+so Spack automatically adds ``--prefix=/path/to/installation/prefix``
-   By default, Autotools installs packages to ``/usr``. We don't want this,
+to your list of ``configure_args``. You don't need to add this yourself.
-   so Spack automatically adds ``--prefix=/path/to/installation/prefix``
-   to your list of ``configure_args``. You don't need to add this yourself.
 
 ^^^^^^^^^^^^^^^^
 Helper functions
@@ -319,8 +308,6 @@ You may have noticed that most of the Autotools flags are of the form
 ``--without-baz``. Since these flags are so common, Spack provides a
 couple of helper functions to make your life easier.
 
-.. _autotools_enable_or_disable:
-
 """""""""""""""""
 enable_or_disable
 """""""""""""""""
@@ -332,11 +319,11 @@ typically used to enable or disable some feature within the package.
 .. code-block:: python
 
    variant(
-       "memchecker",
+       'memchecker',
        default=False,
-       description="Memchecker support for debugging [degrades performance]"
+       description='Memchecker support for debugging [degrades performance]'
    )
-   config_args.extend(self.enable_or_disable("memchecker"))
+   config_args.extend(self.enable_or_disable('memchecker'))
 
 In this example, specifying the variant ``+memchecker`` will generate
 the following configuration options:
@@ -356,15 +343,15 @@ the ``with_or_without`` method.
 .. code-block:: python
 
    variant(
-       "schedulers",
+       'schedulers',
        values=disjoint_sets(
-           ("auto",), ("alps", "lsf", "tm", "slurm", "sge", "loadleveler")
+           ('auto',), ('alps', 'lsf', 'tm', 'slurm', 'sge', 'loadleveler')
-       ).with_non_feature_values("auto", "none"),
+       ).with_non_feature_values('auto', 'none'),
        description="List of schedulers for which support is enabled; "
        "'auto' lets openmpi determine",
    )
-   if not spec.satisfies("schedulers=auto"):
+   if 'schedulers=auto' not in spec:
-       config_args.extend(self.with_or_without("schedulers"))
+       config_args.extend(self.with_or_without('schedulers'))
 
 In this example, specifying the variant ``schedulers=slurm,sge`` will
 generate the following configuration options:
@@ -389,16 +376,16 @@ generated, using the ``activation_value`` argument to
 .. code-block:: python
 
    variant(
-      "fabrics",
+      'fabrics',
        values=disjoint_sets(
-           ("auto",), ("psm", "psm2", "verbs", "mxm", "ucx", "libfabric")
+           ('auto',), ('psm', 'psm2', 'verbs', 'mxm', 'ucx', 'libfabric')
-       ).with_non_feature_values("auto", "none"),
+       ).with_non_feature_values('auto', 'none'),
        description="List of fabrics that are enabled; "
        "'auto' lets openmpi determine",
    )
-   if not spec.satisfies("fabrics=auto"):
+   if 'fabrics=auto' not in spec:
-       config_args.extend(self.with_or_without("fabrics",
+       config_args.extend(self.with_or_without('fabrics',
-           activation_value="prefix"))
+           activation_value='prefix'))
 
 ``activation_value`` accepts a callable that generates the configure
 parameter value given the variant value; but the special value
@@ -422,16 +409,16 @@ When Spack variants and configure flags do not correspond one-to-one, the
 
 .. code-block:: python
 
-   variant("debug_tools", default=False)
+   variant('debug_tools', default=False)
-   config_args += self.enable_or_disable("debug-tools", variant="debug_tools")
+   config_args += self.enable_or_disable('debug-tools', variant='debug_tools')
 
 Or when one variant controls multiple flags:
 
 .. code-block:: python
 
-   variant("debug_tools", default=False)
+   variant('debug_tools', default=False)
-   config_args += self.with_or_without("memchecker", variant="debug_tools")
+   config_args += self.with_or_without('memchecker', variant='debug_tools')
-   config_args += self.with_or_without("profiler", variant="debug_tools")
+   config_args += self.with_or_without('profiler', variant='debug_tools')
 
 
 """"""""""""""""""""
@@ -445,8 +432,8 @@ For example:
 
 .. code-block:: python
 
-   variant("profiler", when="@2.0:")
+   variant('profiler', when='@2.0:')
-   config_args += self.with_or_without("profiler")
+   config_args += self.with_or_without('profiler')
 
 will neither add ``--with-profiler`` nor ``--without-profiler`` when the version is
 below ``2.0``.
@@ -465,10 +452,10 @@ the variant values require atypical behavior.
    def with_or_without_verbs(self, activated):
        # Up through version 1.6, this option was named --with-openib.
        # In version 1.7, it was renamed to be --with-verbs.
-       opt = "verbs" if self.spec.satisfies("@1.7:") else "openib"
+       opt = 'verbs' if self.spec.satisfies('@1.7:') else 'openib'
        if not activated:
-           return f"--without-{opt}"
+           return '--without-{0}'.format(opt)
-       return f"--with-{opt}={self.spec['rdma-core'].prefix}"
+       return '--with-{0}={1}'.format(opt, self.spec['rdma-core'].prefix)
 
 Defining ``with_or_without_verbs`` overrides the behavior of a
 ``fabrics=verbs`` variant, changing the configure-time option to
@@ -492,7 +479,7 @@ do this like so:
 
 .. code-block:: python
 
-   configure_directory = "src"
+   configure_directory = 'src'
 
 ^^^^^^^^^^^^^^^^^^^^^^
 Building out of source
@@ -504,7 +491,7 @@ This can be done using the ``build_directory`` variable:
 
 .. code-block:: python
 
-   build_directory = "spack-build"
+   build_directory = 'spack-build'
 
 By default, Spack will build the package in the same directory that
 contains the ``configure`` script
@@ -527,8 +514,8 @@ library or build the documentation, you can add these like so:
 
 .. code-block:: python
 
-   build_targets = ["all", "docs"]
+   build_targets = ['all', 'docs']
-   install_targets = ["install", "docs"]
+   install_targets = ['install', 'docs']
 
 ^^^^^^^
 Testing

lib/spack/docs/build_systems/bundlepackage.rst

@@ -9,32 +9,9 @@
 Bundle
 ------
 
-``BundlePackage`` represents a set of packages that are expected to work
+``BundlePackage`` represents a set of packages that are expected to work well
-well together, such as a collection of commonly used software libraries.
+together, such as a collection of commonly used software libraries.  The
-The associated software is specified as dependencies.
+associated software is specified as bundle dependencies.
-
-If it makes sense, variants, conflicts, and requirements can be added to
-the package. :ref:`Variants <variants>` ensure that common build options
-are consistent across the packages supporting them.  :ref:`Conflicts
-and requirements <packaging_conflicts>` prevent attempts to build with known
-bugs or limitations.
-
-For example, if ``MyBundlePackage`` is known to only build on ``linux``,
-it could use the ``require`` directive as follows:
-
-.. code-block:: python
-
-    require("platform=linux", msg="MyBundlePackage only builds on linux")
-
-Spack has a number of built-in bundle packages, such as:
-
-* `AmdAocl <https://github.com/spack/spack/blob/develop/var/spack/repos/builtin/packages/amd-aocl/package.py>`_
-* `EcpProxyApps <https://github.com/spack/spack/blob/develop/var/spack/repos/builtin/packages/ecp-proxy-apps/package.py>`_
-* `Libc <https://github.com/spack/spack/blob/develop/var/spack/repos/builtin/packages/libc/package.py>`_
-* `Xsdk <https://github.com/spack/spack/blob/develop/var/spack/repos/builtin/packages/xsdk/package.py>`_
-
-where ``Xsdk`` also inherits from ``CudaPackage`` and ``RocmPackage`` and
-``Libc`` is a virtual bundle package for the C standard library.
 
 
 ^^^^^^^^

lib/spack/docs/build_systems/cachedcmakepackage.rst

@@ -87,7 +87,7 @@ A typical usage of these methods may look something like this:
 
 .. code-block:: python
 
-   def initconfig_mpi_entries(self):
+   def initconfig_mpi_entries(self)
        # Get existing MPI configurations
        entries = super(self, Foo).initconfig_mpi_entries()
 
@@ -95,25 +95,25 @@ A typical usage of these methods may look something like this:
        # This spec has an MPI variant, and we need to enable MPI when it is on.
        # This hypothetical package controls MPI with the ``FOO_MPI`` option to
        # cmake.
-       if self.spec.satisfies("+mpi"):
+       if '+mpi' in self.spec:
-           entries.append(cmake_cache_option("FOO_MPI", True, "enable mpi"))
+           entries.append(cmake_cache_option('FOO_MPI', True, "enable mpi"))
        else:
-           entries.append(cmake_cache_option("FOO_MPI", False, "disable mpi"))
+           entries.append(cmake_cache_option('FOO_MPI', False, "disable mpi"))
 
    def initconfig_package_entries(self):
        # Package specific options
        entries = []
 
-       entries.append("#Entries for build options")
+       entries.append('#Entries for build options')
 
-       bar_on = self.spec.satisfies("+bar")
+       bar_on = '+bar' in self.spec
-       entries.append(cmake_cache_option("FOO_BAR", bar_on, "toggle bar"))
+       entries.append(cmake_cache_option('FOO_BAR', bar_on, 'toggle bar'))
 
-       entries.append("#Entries for dependencies")
+       entries.append('#Entries for dependencies')
 
-       if self.spec["blas"].name == "baz":  # baz is our blas provider
+       if self.spec['blas'].name == 'baz':  # baz is our blas provider
-           entries.append(cmake_cache_string("FOO_BLAS", "baz", "Use baz"))
+       entries.append(cmake_cache_string('FOO_BLAS', 'baz', 'Use baz'))
-           entries.append(cmake_cache_path("BAZ_PREFIX", self.spec["baz"].prefix))
+       entries.append(cmake_cache_path('BAZ_PREFIX', self.spec['baz'].prefix))
 
 ^^^^^^^^^^^^^^^^^^^^^^
 External documentation

lib/spack/docs/build_systems/cmakepackage.rst

@@ -82,7 +82,7 @@ class already contains:
 
 .. code-block:: python
 
-   depends_on("cmake", type="build")
+   depends_on('cmake', type='build')
 
 
 If you need to specify a particular version requirement, you can
@@ -90,7 +90,7 @@ override this in your package:
 
 .. code-block:: python
 
-   depends_on("cmake@2.8.12:", type="build")
+   depends_on('cmake@2.8.12:', type='build')
 
 
 ^^^^^^^^^^^^^^^^^^^
@@ -137,10 +137,10 @@ and without the :meth:`~spack.build_systems.cmake.CMakeBuilder.define` and
 
    def cmake_args(self):
        args = [
-           "-DWHATEVER:STRING=somevalue",
+           '-DWHATEVER:STRING=somevalue',
-           self.define("ENABLE_BROKEN_FEATURE", False),
+           self.define('ENABLE_BROKEN_FEATURE', False),
-           self.define_from_variant("DETECT_HDF5", "hdf5"),
+           self.define_from_variant('DETECT_HDF5', 'hdf5'),
-           self.define_from_variant("THREADS"), # True if +threads
+           self.define_from_variant('THREADS'), # True if +threads
        ]
 
        return args
@@ -151,10 +151,10 @@ and CMake simply ignores the empty command line argument. For example the follow
 
 .. code-block:: python
 
-   variant("example", default=True, when="@2.0:")
+   variant('example', default=True, when='@2.0:')
 
    def cmake_args(self):
-      return [self.define_from_variant("EXAMPLE", "example")]
+      return [self.define_from_variant('EXAMPLE', 'example')]
 
 will generate ``'cmake' '-DEXAMPLE=ON' ...`` when `@2.0: +example` is met, but will
 result in ``'cmake' '' ...`` when the spec version is below ``2.0``.
@@ -193,9 +193,9 @@ a variant to control this:
 
 .. code-block:: python
 
-   variant("build_type", default="RelWithDebInfo",
+   variant('build_type', default='RelWithDebInfo',
-           description="CMake build type",
+           description='CMake build type',
-           values=("Debug", "Release", "RelWithDebInfo", "MinSizeRel"))
+           values=('Debug', 'Release', 'RelWithDebInfo', 'MinSizeRel'))
 
 However, not every CMake package accepts all four of these options.
 Grep the ``CMakeLists.txt`` file to see if the default values are
@@ -205,9 +205,9 @@ package overrides the default variant with:
 
 .. code-block:: python
 
-   variant("build_type", default="DebugRelease",
+   variant('build_type', default='DebugRelease',
-           description="The build type to build",
+           description='The build type to build',
-           values=("Debug", "Release", "DebugRelease"))
+           values=('Debug', 'Release', 'DebugRelease'))
 
 For more information on ``CMAKE_BUILD_TYPE``, see:
 https://cmake.org/cmake/help/latest/variable/CMAKE_BUILD_TYPE.html
@@ -250,7 +250,7 @@ generator is Ninja. To switch to the Ninja generator, simply add:
 
 .. code-block:: python
 
-   generator = "Ninja"
+   generator = 'Ninja'
 
 
 ``CMakePackage`` defaults to "Unix Makefiles". If you switch to the
@@ -258,7 +258,7 @@ Ninja generator, make sure to add:
 
 .. code-block:: python
 
-   depends_on("ninja", type="build")
+   depends_on('ninja', type='build')
 
 to the package as well. Aside from that, you shouldn't need to do
 anything else. Spack will automatically detect that you are using
@@ -288,7 +288,7 @@ like so:
 
 .. code-block:: python
 
-   root_cmakelists_dir = "src"
+   root_cmakelists_dir = 'src'
 
 
 Note that this path is relative to the root of the extracted tarball,
@@ -304,7 +304,7 @@ different sub-directory, simply override ``build_directory`` like so:
 
 .. code-block:: python
 
-   build_directory = "my-build"
+   build_directory = 'my-build'
 
 ^^^^^^^^^^^^^^^^^^^^^^^^^
 Build and install targets
@@ -324,8 +324,8 @@ library or build the documentation, you can add these like so:
 
 .. code-block:: python
 
-   build_targets = ["all", "docs"]
+   build_targets = ['all', 'docs']
-   install_targets = ["install", "docs"]
+   install_targets = ['install', 'docs']
 
 ^^^^^^^
 Testing

lib/spack/docs/build_systems/cudapackage.rst

@@ -54,8 +54,8 @@ to terminate such build attempts with a suitable message:
 
 .. code-block:: python
 
-    conflicts("cuda_arch=none", when="+cuda",
+    conflicts('cuda_arch=none', when='+cuda',
-              msg="CUDA architecture is required")
+              msg='CUDA architecture is required')
 
 Similarly, if your software does not support all versions of the property,
 you could add ``conflicts`` to your package for those versions.  For example,
@@ -66,13 +66,13 @@ custom message should a user attempt such a build:
 .. code-block:: python
 
     unsupported_cuda_archs = [
-        "10", "11", "12", "13",
+        '10', '11', '12', '13',
-        "20", "21",
+        '20', '21',
-        "30", "32", "35", "37"
+        '30', '32', '35', '37'
     ]
     for value in unsupported_cuda_archs:
-        conflicts(f"cuda_arch={value}", when="+cuda",
+        conflicts('cuda_arch={0}'.format(value), when='+cuda',
-                  msg=f"CUDA architecture {value} is not supported")
+                  msg='CUDA architecture {0} is not supported'.format(value))
 
 ^^^^^^^
 Methods
@@ -107,16 +107,16 @@ class of your package.  For example, you can add it to your
             spec = self.spec
             args = []
             ...
-            if spec.satisfies("+cuda"):
+            if '+cuda' in spec:
                 # Set up the cuda macros needed by the build
-                args.append("-DWITH_CUDA=ON")
+                args.append('-DWITH_CUDA=ON')
-                cuda_arch_list = spec.variants["cuda_arch"].value
+                cuda_arch_list = spec.variants['cuda_arch'].value
                 cuda_arch = cuda_arch_list[0]
-                if cuda_arch != "none":
+                if cuda_arch != 'none':
-                    args.append(f"-DCUDA_FLAGS=-arch=sm_{cuda_arch}")
+                    args.append('-DCUDA_FLAGS=-arch=sm_{0}'.format(cuda_arch))
             else:
                 # Ensure build with cuda is disabled
-                args.append("-DWITH_CUDA=OFF")
+                args.append('-DWITH_CUDA=OFF')
             ...
             return args
 
@@ -125,7 +125,7 @@ You will need to customize options as needed for your build.
 
 This example also illustrates how to check for the ``cuda`` variant using
 ``self.spec`` and how to retrieve the ``cuda_arch`` variant's value, which
-is a list, using ``self.spec.variants["cuda_arch"].value``.
+is a list, using ``self.spec.variants['cuda_arch'].value``.
 
 With over 70 packages using ``CudaPackage`` as of January 2021 there are
 lots of examples to choose from to get more ideas for using this package.

lib/spack/docs/build_systems/custompackage.rst

@@ -57,13 +57,13 @@ If you look at the ``perl`` package, you'll see:
 
 .. code-block:: python
 
-   phases = ["configure", "build", "install"]
+   phases = ['configure', 'build', 'install']
 
 Similarly, ``cmake`` defines:
 
 .. code-block:: python
 
-   phases = ["bootstrap", "build", "install"]
+   phases = ['bootstrap', 'build', 'install']
 
 If we look at the ``cmake`` example, this tells Spack's ``PackageBase``
 class to run the ``bootstrap``, ``build``, and ``install`` functions
@@ -78,7 +78,7 @@ If we look at ``perl``, we see that it defines a ``configure`` method:
 .. code-block:: python
 
    def configure(self, spec, prefix):
-       configure = Executable("./Configure")
+       configure = Executable('./Configure')
        configure(*self.configure_args())
 
 There is also a corresponding ``configure_args`` function that handles
@@ -92,7 +92,7 @@ phases are pretty simple:
        make()
 
    def install(self, spec, prefix):
-       make("install")
+       make('install')
 
 The ``cmake`` package looks very similar, but with a ``bootstrap``
 function instead of ``configure``:
@@ -100,14 +100,14 @@ function instead of ``configure``:
 .. code-block:: python
 
    def bootstrap(self, spec, prefix):
-       bootstrap = Executable("./bootstrap")
+       bootstrap = Executable('./bootstrap')
        bootstrap(*self.bootstrap_args())
 
    def build(self, spec, prefix):
        make()
 
    def install(self, spec, prefix):
-       make("install")
+       make('install')
 
 Again, there is a ``boostrap_args`` function that determines the
 correct bootstrap flags to use.
@@ -128,16 +128,16 @@ before or after a particular phase. For example, in ``perl``, we see:
 
 .. code-block:: python
 
-   @run_after("install")
+   @run_after('install')
    def install_cpanm(self):
        spec = self.spec
 
-       if spec.satisfies("+cpanm"):
+       if '+cpanm' in spec:
-           with working_dir(join_path("cpanm", "cpanm")):
+           with working_dir(join_path('cpanm', 'cpanm')):
-               perl = spec["perl"].command
+               perl = spec['perl'].command
-               perl("Makefile.PL")
+               perl('Makefile.PL')
                make()
-               make("install")
+               make('install')
 
 This extra step automatically installs ``cpanm`` in addition to the
 base Perl installation.
@@ -174,10 +174,10 @@ In the ``perl`` package, we can see:
 
 .. code-block:: python
 
-   @run_after("build")
+   @run_after('build')
    @on_package_attributes(run_tests=True)
    def test(self):
-       make("test")
+       make('test')
 
 As you can guess, this runs ``make test`` *after* building the package,
 if and only if testing is requested. Again, this is not specific to
@@ -189,7 +189,7 @@ custom build systems, it can be added to existing build systems as well.
 
    .. code-block:: python
 
-      @run_after("install")
+      @run_after('install')
       @on_package_attributes(run_tests=True)
 
    works as expected. However, if you reverse the ordering:
@@ -197,7 +197,7 @@ custom build systems, it can be added to existing build systems as well.
    .. code-block:: python
 
       @on_package_attributes(run_tests=True)
-      @run_after("install")
+      @run_after('install')
 
    the tests will always be run regardless of whether or not
    ``--test=root`` is requested. See https://github.com/spack/spack/issues/3833

lib/spack/docs/build_systems/inteloneapipackage.rst

@@ -25,8 +25,8 @@ use Spack to build packages with the tools.
 The Spack Python class ``IntelOneapiPackage`` is a base class that is
 used by ``IntelOneapiCompilers``, ``IntelOneapiMkl``,
 ``IntelOneapiTbb`` and other classes to implement the oneAPI
-packages. Search for ``oneAPI`` at `<packages.spack.io>`_ for the full
+packages. See the :ref:`package-list` for the full list of available
-list of available oneAPI packages, or use::
+oneAPI packages or use::
 
   spack list -d oneAPI
 
@@ -53,24 +53,18 @@ Install the oneAPI compilers::
 
 Add the compilers to your ``compilers.yaml`` so spack can use them::
 
-  spack compiler add `spack location -i intel-oneapi-compilers`/compiler/latest/bin
+  spack compiler add `spack location -i intel-oneapi-compilers`/compiler/latest/linux/bin/intel64
+  spack compiler add `spack location -i intel-oneapi-compilers`/compiler/latest/linux/bin
 
 Verify that the compilers are available::
 
   spack compiler list
 
-Note that 2024 and later releases do not include ``icc``. Before 2024,
-the package layout was different::
-  
-  spack compiler add `spack location -i intel-oneapi-compilers`/compiler/latest/linux/bin/intel64
-  spack compiler add `spack location -i intel-oneapi-compilers`/compiler/latest/linux/bin
-
 The ``intel-oneapi-compilers`` package includes 2 families of
 compilers:
 
 * ``intel``: ``icc``, ``icpc``, ``ifort``. Intel's *classic*
-  compilers. 2024 and later releases contain ``ifort``, but not
+  compilers.
-  ``icc`` and ``icpc``.
 * ``oneapi``: ``icx``, ``icpx``, ``ifx``. Intel's new generation of
   compilers based on LLVM.
 
@@ -82,55 +76,6 @@ To build with with ``icx``, do ::
 
   spack install patchelf%oneapi
 
-
-Using oneAPI Spack environment
--------------------------------
-
-In this example, we build lammps with ``icx`` using Spack environment for oneAPI packages created by Intel. The
-compilers are installed with Spack like in example above.
-
-Install the oneAPI compilers::
-
-  spack install intel-oneapi-compilers
-
-Add the compilers to your ``compilers.yaml`` so Spack can use them::
-
-  spack compiler add `spack location -i intel-oneapi-compilers`/compiler/latest/bin
-  spack compiler add `spack location -i intel-oneapi-compilers`/compiler/latest/bin
-
-Verify that the compilers are available::
-
-  spack compiler list
-
-Clone `spack-configs <https://github.com/spack/spack-configs>`_ repo and activate Intel oneAPI CPU environment::
-
-  git clone https://github.com/spack/spack-configs
-  spack env activate spack-configs/INTEL/CPU
-  spack concretize -f
-
-`Intel oneAPI CPU environment <https://github.com/spack/spack-configs/blob/main/INTEL/CPU/spack.yaml>`_  contains applications tested and validated by Intel, this list is constantly extended. And currently it supports:
-
-- `Devito <https://www.devitoproject.org/>`_
-- `GROMACS <https://www.gromacs.org/>`_
-- `HPCG <https://www.hpcg-benchmark.org/>`_
-- `HPL <https://netlib.org/benchmark/hpl/>`_
-- `LAMMPS <https://www.lammps.org/#gsc.tab=0>`_
-- `OpenFOAM <https://www.openfoam.com/>`_
-- `Quantum Espresso <https://www.quantum-espresso.org/>`_
-- `STREAM <https://www.cs.virginia.edu/stream/>`_
-- `WRF <https://github.com/wrf-model/WRF>`_
-
-To build lammps with oneAPI compiler from this environment just run::
-
-  spack install lammps
-
-Compiled binaries can be find using::
-
-  spack cd -i lammps
-
-You can do the same for all other applications from this environment.
-
-
 Using oneAPI MPI to Satisfy a Virtual Dependence
 ------------------------------------------------------
 
@@ -152,7 +97,8 @@ Compilers
 To use the compilers, add some information about the installation to
 ``compilers.yaml``. For most users, it is sufficient to do::
 
-  spack compiler add /opt/intel/oneapi/compiler/latest/bin
+  spack compiler add /opt/intel/oneapi/compiler/latest/linux/bin/intel64
+  spack compiler add /opt/intel/oneapi/compiler/latest/linux/bin
 
 Adapt the paths above if you did not install the tools in the default
 location. After adding the compilers, using them is the same
@@ -161,12 +107,6 @@ Another option is to manually add the configuration to
 ``compilers.yaml`` as described in :ref:`Compiler configuration
 <compiler-config>`.
 
-Before 2024, the directory structure was different::
-  
-  spack compiler add /opt/intel/oneapi/compiler/latest/linux/bin/intel64
-  spack compiler add /opt/intel/oneapi/compiler/latest/linux/bin
-
-
 Libraries
 ---------
 

lib/spack/docs/build_systems/intelpackage.rst

@@ -392,7 +392,7 @@ See section
 :ref:`Configuration Scopes <configuration-scopes>`
 for an explanation about the different files
 and section
-:ref:`Build customization <packages-config>`
+:ref:`Build customization <build-settings>`
 for specifics and examples for ``packages.yaml`` files.
 
 .. If your system administrator did not provide modules for pre-installed Intel
@@ -934,9 +934,9 @@ a *virtual* ``mkl`` package is declared in Spack.
   .. code-block:: python
 
      # Examples for absolute and conditional dependencies:
-     depends_on("mkl")
+     depends_on('mkl')
-     depends_on("mkl", when="+mkl")
+     depends_on('mkl', when='+mkl')
-     depends_on("mkl", when="fftw=mkl")
+     depends_on('mkl', when='fftw=mkl')
 
   The ``MKLROOT`` environment variable (part of the documented API) will be set
   during all stages of client package installation, and is available to both
@@ -972,8 +972,8 @@ a *virtual* ``mkl`` package is declared in Spack.
       def configure_args(self):
           args = []
           ...
-          args.append("--with-blas=%s" % self.spec["blas"].libs.ld_flags)
+          args.append('--with-blas=%s' % self.spec['blas'].libs.ld_flags)
-          args.append("--with-lapack=%s" % self.spec["lapack"].libs.ld_flags)
+          args.append('--with-lapack=%s' % self.spec['lapack'].libs.ld_flags)
           ...
 
   .. tip::
@@ -989,13 +989,13 @@ a *virtual* ``mkl`` package is declared in Spack.
 
   .. code-block:: python
 
-    self.spec["blas"].headers.include_flags
+    self.spec['blas'].headers.include_flags
 
   and to generate linker options (``-L<dir> -llibname ...``), use the same as above,
 
   .. code-block:: python
 
-    self.spec["blas"].libs.ld_flags
+    self.spec['blas'].libs.ld_flags
 
   See
   :ref:`MakefilePackage <makefilepackage>`

lib/spack/docs/build_systems/luapackage.rst

@@ -88,7 +88,7 @@ override the ``luarocks_args`` method like so:
 .. code-block:: python
 
     def luarocks_args(self):
-        return ["flag1", "flag2"]
+        return ['flag1', 'flag2']
 
 One common use of this is to override warnings or flags for newer compilers, as in:
 

lib/spack/docs/build_systems/makefilepackage.rst

@@ -59,7 +59,7 @@ using GNU Make, you should add a dependency on ``gmake``:
 
 .. code-block:: python
 
-   depends_on("gmake", type="build")
+   depends_on('gmake', type='build')
 
 
 ^^^^^^^^^^^^^^^^^^^^^^^^^^
@@ -93,8 +93,8 @@ there are any other variables you need to set, you can do this in the
 .. code-block:: python
 
    def edit(self, spec, prefix):
-       env["PREFIX"] = prefix
+       env['PREFIX'] = prefix
-       env["BLASLIB"] = spec["blas"].libs.ld_flags
+       env['BLASLIB'] = spec['blas'].libs.ld_flags
 
 
 `cbench <https://github.com/spack/spack/blob/develop/var/spack/repos/builtin/packages/cbench/package.py>`_
@@ -113,7 +113,7 @@ you can do this like so:
 
 .. code-block:: python
 
-   build_targets = ["CC=cc"]
+   build_targets = ['CC=cc']
 
 
 If you do need access to the spec, you can create a property like so:
@@ -125,8 +125,8 @@ If you do need access to the spec, you can create a property like so:
        spec = self.spec
 
        return [
-           "CC=cc",
+           'CC=cc',
-           f"BLASLIB={spec['blas'].libs.ld_flags}",
+           'BLASLIB={0}'.format(spec['blas'].libs.ld_flags),
        ]
 
 
@@ -145,12 +145,12 @@ and a ``filter_file`` method to help with this. For example:
 .. code-block:: python
 
    def edit(self, spec, prefix):
-       makefile = FileFilter("Makefile")
+       makefile = FileFilter('Makefile')
 
-       makefile.filter(r"^\s*CC\s*=.*",  f"CC = {spack_cc}")
+       makefile.filter(r'^\s*CC\s*=.*',  'CC = '  + spack_cc)
-       makefile.filter(r"^\s*CXX\s*=.*", f"CXX = {spack_cxx}")
+       makefile.filter(r'^\s*CXX\s*=.*', 'CXX = ' + spack_cxx)
-       makefile.filter(r"^\s*F77\s*=.*", f"F77 = {spack_f77}")
+       makefile.filter(r'^\s*F77\s*=.*', 'F77 = ' + spack_f77)
-       makefile.filter(r"^\s*FC\s*=.*",  f"FC = {spack_fc}")
+       makefile.filter(r'^\s*FC\s*=.*',  'FC = '  + spack_fc)
 
 
 `stream <https://github.com/spack/spack/blob/develop/var/spack/repos/builtin/packages/stream/package.py>`_
@@ -181,16 +181,16 @@ well for storing variables:
 
    def edit(self, spec, prefix):
        config = {
-           "CC": "cc",
+           'CC': 'cc',
-           "MAKE": "make",
+           'MAKE': 'make',
        }
 
-       if spec.satisfies("+blas"):
+       if '+blas' in spec:
-           config["BLAS_LIBS"] = spec["blas"].libs.joined()
+           config['BLAS_LIBS'] = spec['blas'].libs.joined()
 
-       with open("make.inc", "w") as inc:
+       with open('make.inc', 'w') as inc:
            for key in config:
-               inc.write(f"{key} = {config[key]}\n")
+               inc.write('{0} = {1}\n'.format(key, config[key]))
 
 
 `elk <https://github.com/spack/spack/blob/develop/var/spack/repos/builtin/packages/elk/package.py>`_
@@ -204,14 +204,14 @@ them in a list:
 
    def edit(self, spec, prefix):
        config = [
-           f"INSTALL_DIR = {prefix}",
+           'INSTALL_DIR = {0}'.format(prefix),
-           "INCLUDE_DIR = $(INSTALL_DIR)/include",
+           'INCLUDE_DIR = $(INSTALL_DIR)/include',
-           "LIBRARY_DIR = $(INSTALL_DIR)/lib",
+           'LIBRARY_DIR = $(INSTALL_DIR)/lib',
        ]
 
-       with open("make.inc", "w") as inc:
+       with open('make.inc', 'w') as inc:
            for var in config:
-               inc.write(f"{var}\n")
+               inc.write('{0}\n'.format(var))
 
 
 `hpl <https://github.com/spack/spack/blob/develop/var/spack/repos/builtin/packages/hpl/package.py>`_
@@ -284,7 +284,7 @@ can tell Spack where to locate it like so:
 
 .. code-block:: python
 
-   build_directory = "src"
+   build_directory = 'src'
 
 
 ^^^^^^^^^^^^^^^^^^^
@@ -299,8 +299,8 @@ install the package:
 
    def install(self, spec, prefix):
        mkdir(prefix.bin)
-       install("foo", prefix.bin)
+       install('foo', prefix.bin)
-       install_tree("lib", prefix.lib)
+       install_tree('lib', prefix.lib)
 
 
 ^^^^^^^^^^^^^^^^^^^^^^

lib/spack/docs/build_systems/mavenpackage.rst

@@ -48,8 +48,8 @@ class automatically adds the following dependencies:
 
 .. code-block:: python
 
-   depends_on("java", type=("build", "run"))
+   depends_on('java', type=('build', 'run'))
-   depends_on("maven", type="build")
+   depends_on('maven', type='build')
 
 
 In the ``pom.xml`` file, you may see sections like:
@@ -72,8 +72,8 @@ should add:
 
 .. code-block:: python
 
-   depends_on("java@7:", type="build")
+   depends_on('java@7:', type='build')
-   depends_on("maven@3.5.4:", type="build")
+   depends_on('maven@3.5.4:', type='build')
 
 
 ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
@@ -88,9 +88,9 @@ the build phase. For example:
 
    def build_args(self):
        return [
-           "-Pdist,native",
+           '-Pdist,native',
-           "-Dtar",
+           '-Dtar',
-           "-Dmaven.javadoc.skip=true"
+           '-Dmaven.javadoc.skip=true'
        ]
 
 

lib/spack/docs/build_systems/mesonpackage.rst

@@ -86,8 +86,8 @@ the ``MesonPackage`` base class already contains:
 
 .. code-block:: python
 
-   depends_on("meson", type="build")
+   depends_on('meson', type='build')
-   depends_on("ninja", type="build")
+   depends_on('ninja', type='build')
 
 
 If you need to specify a particular version requirement, you can
@@ -95,8 +95,8 @@ override this in your package:
 
 .. code-block:: python
 
-   depends_on("meson@0.43.0:", type="build")
+   depends_on('meson@0.43.0:', type='build')
-   depends_on("ninja", type="build")
+   depends_on('ninja', type='build')
 
 
 ^^^^^^^^^^^^^^^^^^^
@@ -121,7 +121,7 @@ override the ``meson_args`` method like so:
 .. code-block:: python
 
    def meson_args(self):
-       return ["--warnlevel=3"]
+       return ['--warnlevel=3']
 
 
 This method can be used to pass flags as well as variables.

lib/spack/docs/build_systems/perlpackage.rst

@@ -118,7 +118,7 @@ so ``PerlPackage`` contains:
 
 .. code-block:: python
 
-   extends("perl")
+   extends('perl')
 
 
 If your package requires a specific version of Perl, you should
@@ -132,14 +132,14 @@ properly. If your package uses ``Makefile.PL`` to build, add:
 
 .. code-block:: python
 
-   depends_on("perl-extutils-makemaker", type="build")
+   depends_on('perl-extutils-makemaker', type='build')
 
 
 If your package uses ``Build.PL`` to build, add:
 
 .. code-block:: python
 
-   depends_on("perl-module-build", type="build")
+   depends_on('perl-module-build', type='build')
 
 
 ^^^^^^^^^^^^^^^^^
@@ -165,11 +165,11 @@ arguments to ``Makefile.PL`` or ``Build.PL`` by overriding
 .. code-block:: python
 
    def configure_args(self):
-       expat = self.spec["expat"].prefix
+       expat = self.spec['expat'].prefix
 
        return [
-           "EXPATLIBPATH={0}".format(expat.lib),
+           'EXPATLIBPATH={0}'.format(expat.lib),
-           "EXPATINCPATH={0}".format(expat.include),
+           'EXPATINCPATH={0}'.format(expat.include),
        ]
 
 

lib/spack/docs/build_systems/pythonpackage.rst

@@ -152,16 +152,16 @@ set. Once set, ``pypi`` will be used to define the ``homepage``,
 
 .. code-block:: python
 
-   homepage = "https://pypi.org/project/setuptools/"
+   homepage = 'https://pypi.org/project/setuptools/'
-   url      = "https://pypi.org/packages/source/s/setuptools/setuptools-49.2.0.zip"
+   url      = 'https://pypi.org/packages/source/s/setuptools/setuptools-49.2.0.zip'
-   list_url = "https://pypi.org/simple/setuptools/"
+   list_url = 'https://pypi.org/simple/setuptools/'
 
 
 is equivalent to:
 
 .. code-block:: python
 
-   pypi = "setuptools/setuptools-49.2.0.zip"
+   pypi = 'setuptools/setuptools-49.2.0.zip'
 
 
 If a package has a different homepage listed on PyPI, you can
@@ -208,7 +208,7 @@ dependencies to your package:
 
 .. code-block:: python
 
-   depends_on("py-setuptools@42:", type="build")
+   depends_on('py-setuptools@42:', type='build')
 
 
 Note that ``py-wheel`` is already listed as a build dependency in the
@@ -232,7 +232,7 @@ Look for dependencies under the following keys:
 * ``dependencies`` under ``[project]``
 
   These packages are required for building and installation. You can
-  add them with ``type=("build", "run")``.
+  add them with ``type=('build', 'run')``.
 
 * ``[project.optional-dependencies]``
 
@@ -279,12 +279,12 @@ distutils library, and has almost the exact same API. In addition to
 * ``setup_requires``
 
   These packages are usually only needed at build-time, so you can
-  add them with ``type="build"``.
+  add them with ``type='build'``.
 
 * ``install_requires``
 
   These packages are required for building and installation. You can
-  add them with ``type=("build", "run")``.
+  add them with ``type=('build', 'run')``.
 
 * ``extras_require``
 
@@ -296,7 +296,7 @@ distutils library, and has almost the exact same API. In addition to
 
   These are packages that are required to run the unit tests for the
   package. These dependencies can be specified using the
-  ``type="test"`` dependency type. However, the PyPI tarballs rarely
+  ``type='test'`` dependency type. However, the PyPI tarballs rarely
   contain unit tests, so there is usually no reason to add these.
 
 See https://setuptools.pypa.io/en/latest/userguide/dependency_management.html
@@ -321,7 +321,7 @@ older versions of flit may use the following keys:
 * ``requires`` under ``[tool.flit.metadata]``
 
   These packages are required for building and installation. You can
-  add them with ``type=("build", "run")``.
+  add them with ``type=('build', 'run')``.
 
 * ``[tool.flit.metadata.requires-extra]``
 
@@ -434,12 +434,12 @@ the BLAS/LAPACK library you want pkg-config to search for:
 
 .. code-block:: python
 
-   depends_on("py-pip@22.1:", type="build")
+   depends_on('py-pip@22.1:', type='build')
 
    def config_settings(self, spec, prefix):
        return {
-           "blas": spec["blas"].libs.names[0],
+           'blas': spec['blas'].libs.names[0],
-           "lapack": spec["lapack"].libs.names[0],
+           'lapack': spec['lapack'].libs.names[0],
        }
 
 
@@ -463,10 +463,10 @@ has an optional dependency on ``libyaml`` that can be enabled like so:
 
    def global_options(self, spec, prefix):
        options = []
-       if spec.satisfies("+libyaml"):
+       if '+libyaml' in spec:
-           options.append("--with-libyaml")
+           options.append('--with-libyaml')
        else:
-           options.append("--without-libyaml")
+           options.append('--without-libyaml')
        return options
 
 
@@ -492,10 +492,10 @@ allows you to specify the directories to search for ``libyaml``:
 
    def install_options(self, spec, prefix):
        options = []
-       if spec.satisfies("+libyaml"):
+       if '+libyaml' in spec:
            options.extend([
-               spec["libyaml"].libs.search_flags,
+               spec['libyaml'].libs.search_flags,
-               spec["libyaml"].headers.include_flags,
+               spec['libyaml'].headers.include_flags,
            ])
        return options
 
@@ -556,7 +556,7 @@ detected are wrong, you can provide the names yourself by overriding
 
 .. code-block:: python
 
-   import_modules = ["six"]
+   import_modules = ['six']
 
 
 Sometimes the list of module names to import depends on how the
@@ -571,9 +571,9 @@ This can be expressed like so:
 
    @property
    def import_modules(self):
-       modules = ["yaml"]
+       modules = ['yaml']
-       if self.spec.satisfies("+libyaml"):
+       if '+libyaml' in self.spec:
-           modules.append("yaml.cyaml")
+           modules.append('yaml.cyaml')
        return modules
 
 
@@ -586,14 +586,14 @@ Instead of defining the ``import_modules`` explicitly, only the subset
 of module names to be skipped can be defined by using ``skip_modules``.
 If a defined module has submodules, they are skipped as well, e.g.,
 in case the ``plotting`` modules should be excluded from the
-automatically detected ``import_modules`` ``["nilearn", "nilearn.surface",
+automatically detected ``import_modules`` ``['nilearn', 'nilearn.surface',
-"nilearn.plotting", "nilearn.plotting.data"]`` set:
+'nilearn.plotting', 'nilearn.plotting.data']`` set:
 
 .. code-block:: python
 
-        skip_modules = ["nilearn.plotting"]
+        skip_modules = ['nilearn.plotting']
 
-This will set ``import_modules`` to ``["nilearn", "nilearn.surface"]``
+This will set ``import_modules`` to ``['nilearn', 'nilearn.surface']``
 
 Import tests can be run during the installation using ``spack install
 --test=root`` or at any time after the installation using
@@ -612,11 +612,11 @@ after the ``install`` phase:
 
 .. code-block:: python
 
-   @run_after("install")
+   @run_after('install')
    @on_package_attributes(run_tests=True)
    def install_test(self):
-       with working_dir("spack-test", create=True):
+       with working_dir('spack-test', create=True):
-           python("-c", "import numpy; numpy.test('full', verbose=2)")
+           python('-c', 'import numpy; numpy.test("full", verbose=2)')
 
 
 when testing is enabled during the installation (i.e., ``spack install
@@ -638,7 +638,7 @@ provides Python bindings in a ``python`` directory, you can use:
 
 .. code-block:: python
 
-   build_directory = "python"
+   build_directory = 'python'
 
 
 ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^

lib/spack/docs/build_systems/qmakepackage.rst

@@ -83,7 +83,7 @@ base class already contains:
 
 .. code-block:: python
 
-   depends_on("qt", type="build")
+   depends_on('qt', type='build')
 
 
 If you want to specify a particular version requirement, or need to
@@ -91,7 +91,7 @@ link to the ``qt`` libraries, you can override this in your package:
 
 .. code-block:: python
 
-   depends_on("qt@5.6.0:")
+   depends_on('qt@5.6.0:')
 
 ^^^^^^^^^^^^^^^^^^^^^^^^^^
 Passing arguments to qmake
@@ -103,7 +103,7 @@ override the ``qmake_args`` method like so:
 .. code-block:: python
 
    def qmake_args(self):
-       return ["-recursive"]
+       return ['-recursive']
 
 
 This method can be used to pass flags as well as variables.
@@ -118,7 +118,7 @@ sub-directory by adding the following to the package:
 
 .. code-block:: python
 
-   build_directory = "src"
+   build_directory = 'src'
 
 
 ^^^^^^^^^^^^^^^^^^^^^^

lib/spack/docs/build_systems/rocmpackage.rst

@@ -81,27 +81,28 @@ class of your package.  For example, you can add it to your
     class MyRocmPackage(CMakePackage, ROCmPackage):
         ...
         # Ensure +rocm and amdgpu_targets are passed to dependencies
-        depends_on("mydeppackage", when="+rocm")
+        depends_on('mydeppackage', when='+rocm')
         for val in ROCmPackage.amdgpu_targets:
-            depends_on(f"mydeppackage amdgpu_target={val}",
+            depends_on('mydeppackage amdgpu_target={0}'.format(val),
-                       when=f"amdgpu_target={val}")
+                       when='amdgpu_target={0}'.format(val))
         ...
 
         def cmake_args(self):
             spec = self.spec
             args = []
             ...
-            if spec.satisfies("+rocm"):
+            if '+rocm' in spec:
                 # Set up the hip macros needed by the build
                 args.extend([
-                    "-DENABLE_HIP=ON",
+                    '-DENABLE_HIP=ON',
-                    f"-DHIP_ROOT_DIR={spec['hip'].prefix}"])
+                    '-DHIP_ROOT_DIR={0}'.format(spec['hip'].prefix)])
-                rocm_archs = spec.variants["amdgpu_target"].value
+                rocm_archs = spec.variants['amdgpu_target'].value
-                if "none" not in rocm_archs:
+                if 'none' not in rocm_archs:
-                    args.append(f"-DHIP_HIPCC_FLAGS=--amdgpu-target={','.join(rocm_archs}")
+                    args.append('-DHIP_HIPCC_FLAGS=--amdgpu-target={0}'
+                                .format(",".join(rocm_archs)))
             else:
                 # Ensure build with hip is disabled
-                args.append("-DENABLE_HIP=OFF")
+                args.append('-DENABLE_HIP=OFF')
             ...
             return args
         ...
@@ -113,7 +114,7 @@ build.
 
 This example also illustrates how to check for the ``rocm`` variant using
 ``self.spec`` and how to retrieve the ``amdgpu_target`` variant's value
-using ``self.spec.variants["amdgpu_target"].value``.
+using ``self.spec.variants['amdgpu_target'].value``.
 
 All five packages using ``ROCmPackage`` as of January 2021 also use the
 :ref:`CudaPackage <cudapackage>`. So it is worth looking at those packages

lib/spack/docs/build_systems/rpackage.rst

@@ -163,28 +163,28 @@ attributes that can be used to set ``homepage``, ``url``, ``list_url``, and
 
 .. code-block:: python
 
-   cran = "caret"
+   cran = 'caret'
 
 is equivalent to:
 
 .. code-block:: python
 
-   homepage = "https://cloud.r-project.org/package=caret"
+   homepage = 'https://cloud.r-project.org/package=caret'
-   url      = "https://cloud.r-project.org/src/contrib/caret_6.0-86.tar.gz"
+   url      = 'https://cloud.r-project.org/src/contrib/caret_6.0-86.tar.gz'
-   list_url = "https://cloud.r-project.org/src/contrib/Archive/caret"
+   list_url = 'https://cloud.r-project.org/src/contrib/Archive/caret'
 
 Likewise, the following ``bioc`` attribute:
 
 .. code-block:: python
 
-   bioc = "BiocVersion"
+   bioc = 'BiocVersion'
 
 is equivalent to:
 
 .. code-block:: python
 
-   homepage = "https://bioconductor.org/packages/BiocVersion/"
+   homepage = 'https://bioconductor.org/packages/BiocVersion/'
-   git      = "https://git.bioconductor.org/packages/BiocVersion"
+   git      = 'https://git.bioconductor.org/packages/BiocVersion'
 
 
 ^^^^^^^^^^^^^^^^^^^^^^^^^
@@ -200,7 +200,7 @@ base class contains:
 
 .. code-block:: python
 
-   extends("r")
+   extends('r')
 
 
 Take a close look at the homepage for ``caret``. If you look at the
@@ -209,7 +209,7 @@ You should add this to your package like so:
 
 .. code-block:: python
 
-   depends_on("r@3.2.0:", type=("build", "run"))
+   depends_on('r@3.2.0:', type=('build', 'run'))
 
 
 ^^^^^^^^^^^^^^
@@ -227,7 +227,7 @@ and list all of their dependencies in the following sections:
 * LinkingTo
 
 As far as Spack is concerned, all 3 of these dependency types
-correspond to ``type=("build", "run")``, so you don't have to worry
+correspond to ``type=('build', 'run')``, so you don't have to worry
 about the details. If you are curious what they mean,
 https://github.com/spack/spack/issues/2951 has a pretty good summary:
 
@@ -330,7 +330,7 @@ the dependency:
 
 .. code-block:: python
 
-   depends_on("r-lattice@0.20:", type=("build", "run"))
+   depends_on('r-lattice@0.20:', type=('build', 'run'))
 
 
 ^^^^^^^^^^^^^^^^^^
@@ -361,20 +361,20 @@ like so:
 .. code-block:: python
 
    def configure_args(self):
-       mpi_name = self.spec["mpi"].name
+       mpi_name = self.spec['mpi'].name
 
        # The type of MPI. Supported values are:
        # OPENMPI, LAM, MPICH, MPICH2, or CRAY
-       if mpi_name == "openmpi":
+       if mpi_name == 'openmpi':
-           Rmpi_type = "OPENMPI"
+           Rmpi_type = 'OPENMPI'
-       elif mpi_name == "mpich":
+       elif mpi_name == 'mpich':
-           Rmpi_type = "MPICH2"
+           Rmpi_type = 'MPICH2'
        else:
-           raise InstallError("Unsupported MPI type")
+           raise InstallError('Unsupported MPI type')
 
        return [
-           "--with-Rmpi-type={0}".format(Rmpi_type),
+           '--with-Rmpi-type={0}'.format(Rmpi_type),
-           "--with-mpi={0}".format(spec["mpi"].prefix),
+           '--with-mpi={0}'.format(spec['mpi'].prefix),
        ]
 
 

lib/spack/docs/build_systems/rubypackage.rst

@@ -84,8 +84,8 @@ The ``*.gemspec`` file may contain something like:
 
 .. code-block:: ruby
 
-   summary = "An implementation of the AsciiDoc text processor and publishing toolchain"
+   summary = 'An implementation of the AsciiDoc text processor and publishing toolchain'
-   description = "A fast, open source text processor and publishing toolchain for converting AsciiDoc content to HTML 5, DocBook 5, and other formats."
+   description = 'A fast, open source text processor and publishing toolchain for converting AsciiDoc content to HTML 5, DocBook 5, and other formats.'
 
 
 Either of these can be used for the description of the Spack package.
@@ -98,7 +98,7 @@ The ``*.gemspec`` file may contain something like:
 
 .. code-block:: ruby
 
-   homepage = "https://asciidoctor.org"
+   homepage = 'https://asciidoctor.org'
 
 
 This should be used as the official homepage of the Spack package.
@@ -112,21 +112,21 @@ the base class contains:
 
 .. code-block:: python
 
-   extends("ruby")
+   extends('ruby')
 
 
 The ``*.gemspec`` file may contain something like:
 
 .. code-block:: ruby
 
-   required_ruby_version = ">= 2.3.0"
+   required_ruby_version = '>= 2.3.0'
 
 
 This can be added to the Spack package using:
 
 .. code-block:: python
 
-   depends_on("ruby@2.3.0:", type=("build", "run"))
+   depends_on('ruby@2.3.0:', type=('build', 'run'))
 
 
 ^^^^^^^^^^^^^^^^^

lib/spack/docs/build_systems/sconspackage.rst

@@ -57,7 +57,7 @@ overridden like so:
 .. code-block:: python
 
    def test(self):
-       scons("check")
+       scons('check')
 
 
 ^^^^^^^^^^^^^^^
@@ -88,7 +88,7 @@ base class already contains:
 
 .. code-block:: python
 
-   depends_on("scons", type="build")
+   depends_on('scons', type='build')
 
 
 If you want to specify a particular version requirement, you can override
@@ -96,7 +96,7 @@ this in your package:
 
 .. code-block:: python
 
-   depends_on("scons@2.3.0:", type="build")
+   depends_on('scons@2.3.0:', type='build')
 
 
 ^^^^^^^^^^^^^^^^^^^^^^^^^
@@ -238,14 +238,14 @@ the package build phase. This is done by overriding ``build_args`` like so:
 
    def build_args(self, spec, prefix):
        args = [
-         f"PREFIX={prefix}",
+         'PREFIX={0}'.format(prefix),
-         f"ZLIB={spec['zlib'].prefix}",
+         'ZLIB={0}'.format(spec['zlib'].prefix),
        ]
 
-       if spec.satisfies("+debug"):
+       if '+debug' in spec:
-           args.append("DEBUG=yes")
+           args.append('DEBUG=yes')
        else:
-           args.append("DEBUG=no")
+           args.append('DEBUG=no')
 
        return args
 
@@ -275,8 +275,8 @@ environment variables. For example, cantera has the following option:
    * env_vars: [ string ]
        Environment variables to propagate through to SCons. Either the
        string "all" or a comma separated list of variable names, e.g.
-       "LD_LIBRARY_PATH,HOME".
+       'LD_LIBRARY_PATH,HOME'.
-       - default: "LD_LIBRARY_PATH,PYTHONPATH"
+       - default: 'LD_LIBRARY_PATH,PYTHONPATH'
 
 
 In the case of cantera, using ``env_vars=all`` allows us to use

lib/spack/docs/build_systems/sippackage.rst

@@ -32,7 +32,7 @@ By default, these phases run:
 
 .. code-block:: console
 
-   $ sip-build --verbose --target-dir ...
+   $ python configure.py --bindir ... --destdir ...
    $ make
    $ make install
 
@@ -41,30 +41,30 @@ By default, these phases run:
 Important files
 ^^^^^^^^^^^^^^^
 
-Each SIP package comes with a custom configuration file written in Python.
+Each SIP package comes with a custom ``configure.py`` build script,
-For newer packages, this is called ``project.py``, while in older packages,
+written in Python. This script contains instructions to build the project.
-it may be called ``configure.py``. This script contains instructions to build
-the project.
 
 ^^^^^^^^^^^^^^^^^^^^^^^^^
 Build system dependencies
 ^^^^^^^^^^^^^^^^^^^^^^^^^
 
-``SIPPackage`` requires several dependencies. Python and SIP are needed at build-time
+``SIPPackage`` requires several dependencies. Python is needed to run
-to run the aforementioned configure script. Python is also needed at run-time to
+the ``configure.py`` build script, and to run the resulting Python
-actually use the installed Python library. And as we are building Python bindings
+libraries. Qt is needed to provide the ``qmake`` command. SIP is also
-for C/C++ libraries, Python is also needed as a link dependency. All of these
+needed to build the package. All of these dependencies are automatically
-dependencies are automatically added via the base class.
+added via the base class
 
 .. code-block:: python
 
-   extends("python", type=("build", "link", "run"))
+   extends('python')
-   depends_on("py-sip", type="build")
 
+   depends_on('qt', type='build')
 
-^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
+   depends_on('py-sip', type='build')
-Passing arguments to ``sip-build``
+
-^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
+^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
+Passing arguments to ``configure.py``
+^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
 
 Each phase comes with a ``<phase_args>`` function that can be used to pass
 arguments to that particular phase. For example, if you need to pass
@@ -72,11 +72,11 @@ arguments to the configure phase, you can use:
 
 .. code-block:: python
 
-   def configure_args(self):
+   def configure_args(self, spec, prefix):
-       return ["--no-python-dbus"]
+       return ['--no-python-dbus']
 
 
-A list of valid options can be found by running ``sip-build --help``.
+A list of valid options can be found by running ``python configure.py --help``.
 
 ^^^^^^^
 Testing
@@ -124,7 +124,7 @@ are wrong, you can provide the names yourself by overriding
 
 .. code-block:: python
 
-   import_modules = ["PyQt5"]
+   import_modules = ['PyQt5']
 
 
 These tests often catch missing dependencies and non-RPATHed

lib/spack/docs/build_systems/wafpackage.rst

@@ -63,8 +63,8 @@ run package-specific unit tests.
 .. code-block:: python
 
    def installtest(self):
-       with working_dir("test"):
+       with working_dir('test'):
-           pytest = which("py.test")
+           pytest = which('py.test')
            pytest()
 
 
@@ -93,7 +93,7 @@ the following dependency automatically:
 
 .. code-block:: python
 
-   depends_on("python@2.5:", type="build")
+   depends_on('python@2.5:', type='build')
 
 
 Waf only supports Python 2.5 and up.
@@ -113,7 +113,7 @@ phase, you can use:
        args = []
 
        if self.run_tests:
-           args.append("--test")
+           args.append('--test')
 
        return args
 

lib/spack/docs/conf.py

@@ -48,6 +48,9 @@
 os.environ["COLIFY_SIZE"] = "25x120"
 os.environ["COLUMNS"] = "120"
 
+# Generate full package list if needed
+subprocess.call(["spack", "list", "--format=html", "--update=package_list.html"])
+
 # Generate a command index if an update is needed
 subprocess.call(
     [
@@ -94,7 +97,9 @@ class PatchedPythonDomain(PythonDomain):
     def resolve_xref(self, env, fromdocname, builder, typ, target, node, contnode):
         if "refspecific" in node:
             del node["refspecific"]
-        return super().resolve_xref(env, fromdocname, builder, typ, target, node, contnode)
+        return super(PatchedPythonDomain, self).resolve_xref(
+            env, fromdocname, builder, typ, target, node, contnode
+        )
 
 
 #
@@ -144,6 +149,7 @@ def setup(sphinx):
 # Get nice vector graphics
 graphviz_output_format = "svg"
 
+
 # Add any paths that contain templates here, relative to this directory.
 templates_path = ["_templates"]
 
@@ -204,7 +210,6 @@ def setup(sphinx):
     ("py:class", "clingo.Control"),
     ("py:class", "six.moves.urllib.parse.ParseResult"),
     ("py:class", "TextIO"),
-    ("py:class", "hashlib._Hash"),
     # Spack classes that are private and we don't want to expose
     ("py:class", "spack.provider_index._IndexBase"),
     ("py:class", "spack.repo._PrependFileLoader"),
@@ -212,8 +217,6 @@ def setup(sphinx):
     # Spack classes that intersphinx is unable to resolve
     ("py:class", "spack.version.StandardVersion"),
     ("py:class", "spack.spec.DependencySpec"),
-    ("py:class", "spack.spec.InstallStatus"),
-    ("py:class", "spack.spec.SpecfileReaderBase"),
     ("py:class", "spack.install_test.Pb"),
 ]
 
@@ -230,8 +233,30 @@ def setup(sphinx):
 # If true, sectionauthor and moduleauthor directives will be shown in the
 # output. They are ignored by default.
 # show_authors = False
-sys.path.append("./_pygments")
+
-pygments_style = "style.SpackStyle"
+# The name of the Pygments (syntax highlighting) style to use.
+# We use our own extension of the default style with a few modifications
+from pygments.style import Style
+from pygments.styles.default import DefaultStyle
+from pygments.token import Comment, Generic, Text
+
+
+class SpackStyle(DefaultStyle):
+    styles = DefaultStyle.styles.copy()
+    background_color = "#f4f4f8"
+    styles[Generic.Output] = "#355"
+    styles[Generic.Prompt] = "bold #346ec9"
+
+
+import pkg_resources
+
+dist = pkg_resources.Distribution(__file__)
+sys.path.append(".")  # make 'conf' module findable
+ep = pkg_resources.EntryPoint.parse("spack = conf:SpackStyle", dist=dist)
+dist._ep_map = {"pygments.styles": {"plugin1": ep}}
+pkg_resources.working_set.add(dist)
+
+pygments_style = "spack"
 
 # A list of ignored prefixes for module index sorting.
 # modindex_common_prefix = []
@@ -316,15 +341,16 @@ def setup(sphinx):
 # Output file base name for HTML help builder.
 htmlhelp_basename = "Spackdoc"
 
+
 # -- Options for LaTeX output --------------------------------------------------
 
 latex_elements = {
     # The paper size ('letterpaper' or 'a4paper').
-    # 'papersize': 'letterpaper',
+    #'papersize': 'letterpaper',
     # The font size ('10pt', '11pt' or '12pt').
-    # 'pointsize': '10pt',
+    #'pointsize': '10pt',
     # Additional stuff for the LaTeX preamble.
-    # 'preamble': '',
+    #'preamble': '',
 }
 
 # Grouping the document tree into LaTeX files. List of tuples

lib/spack/docs/config_yaml.rst

@@ -292,29 +292,14 @@ It is also worth noting that:
          non_bindable_shared_objects = ["libinterface.so"]
 
 ----------------------
-``install_status``
+``terminal_title``
 ----------------------
 
-When set to ``true``, Spack will show information about its current progress
+By setting this option to ``true``, Spack will update the terminal's title to
-as well as the current and total package numbers. Progress is shown both
+provide information about its current progress as well as the current and
-in the terminal title and inline. Setting it to ``false`` will not show any
+total package numbers.
-progress information.
 
 To work properly, this requires your terminal to reset its title after
 Spack has finished its work, otherwise Spack's status information will
 remain in the terminal's title indefinitely. Most terminals should already
 be set up this way and clear Spack's status information.
-
------------
-``aliases``
------------
-
-Aliases can be used to define new Spack commands. They can be either shortcuts
-for longer commands or include specific arguments for convenience. For instance,
-if users want to use ``spack install``'s ``-v`` argument all the time, they can
-create a new alias called ``inst`` that will always call ``install -v``:
-
-.. code-block:: yaml
-
-   aliases:
-     inst: install -v

lib/spack/docs/configuration.rst

@@ -17,7 +17,7 @@ case you want to skip directly to specific docs:
 * :ref:`config.yaml <config-yaml>`
 * :ref:`mirrors.yaml <mirrors>`
 * :ref:`modules.yaml <modules>`
-* :ref:`packages.yaml <packages-config>`
+* :ref:`packages.yaml <build-settings>`
 * :ref:`repos.yaml <repositories>`
 
 You can also add any of these as inline configuration in the YAML
@@ -243,11 +243,9 @@ lower-precedence settings. Completely ignoring higher-level configuration
 options is supported with the ``::`` notation for keys (see
 :ref:`config-overrides` below).
 
-There are also special notations for string concatenation and precendense override:
+There are also special notations for string concatenation and precendense override.
-
+Using the ``+:`` notation  can be used to force *prepending* strings or lists. For lists, this is identical
-* ``+:`` will force *prepending* strings or lists. For lists, this is the default behavior.
+to the default behavior. Using the ``-:`` works similarly, but for *appending* values.
-* ``-:`` works similarly, but for *appending* values.
-
 :ref:`config-prepend-append`
 
 ^^^^^^^^^^^

lib/spack/docs/containers.rst

@@ -24,16 +24,6 @@ image, or to set up a proper entrypoint to run the image. These tasks are
 usually both necessary and repetitive, so Spack comes with a command
 to generate recipes for container images starting from a ``spack.yaml``.
 
-.. seealso::
-
-  This page is a reference for generating recipes to build container images.
-  It means that your environment is built from scratch inside the container
-  runtime.
-
-  Since v0.21, Spack can also create container images from existing package installations
-  on your host system. See :ref:`binary_caches_oci` for more information on
-  that topic.
-
 --------------------
 A Quick Introduction
 --------------------
@@ -222,12 +212,18 @@ under the ``container`` attribute of environments:
          final:
          - libgomp
 
+       # Extra instructions
+       extra_instructions:
+         final: |
+           RUN echo 'export PS1="\[$(tput bold)\]\[$(tput setaf 1)\][gromacs]\[$(tput setaf 2)\]\u\[$(tput sgr0)\]:\w $ "' >> ~/.bashrc
+
        # Labels for the image
        labels:
          app: "gromacs"
          mpi: "mpich"
 
-A detailed description of the options available can be found in the :ref:`container_config_options` section.
+A detailed description of the options available can be found in the
+:ref:`container_config_options` section.
 
 -------------------
 Setting Base Images
@@ -529,13 +525,6 @@ the example below:
    COPY data /share/myapp/data
    {% endblock %}
 
-The Dockerfile is generated by running:
-
-.. code-block:: console
-
-   $ spack -e /opt/environment containerize
-
-Note that the environment must be active for spack to read the template.
 The recipe that gets generated contains the two extra instruction that we added in our template extension:
 
 .. code-block:: Dockerfile
@@ -647,7 +636,7 @@ to customize the generation of container recipes:
      - No
    * - ``os_packages:command``
      - Tool used to manage system packages
-     - ``apt``, ``yum``, ``dnf``, ``dnf_epel``, ``zypper``, ``apk``, ``yum_amazon``
+     - ``apt``, ``yum``, ``zypper``, ``apk``, ``yum_amazon``
      - Only with custom base images
    * - ``os_packages:update``
      - Whether or not to update the list of available packages

lib/spack/docs/contribution_guide.rst

@@ -310,11 +310,53 @@ Once all of the dependencies are installed, you can try building the documentati
    $ make clean
    $ make
 
-If you see any warning or error messages, you will have to correct those before your PR
+If you see any warning or error messages, you will have to correct those before
-is accepted. If you are editing the documentation, you should be running the
+your PR is accepted.
-documentation tests to make sure there are no errors. Documentation changes can result
+
-in some obfuscated warning messages. If you don't understand what they mean, feel free
+If you are editing the documentation, you should obviously be running the
-to ask when you submit your PR.
+documentation tests. But even if you are simply adding a new package, your
+changes could cause the documentation tests to fail:
+
+.. code-block:: console
+
+   package_list.rst:8745: WARNING: Block quote ends without a blank line; unexpected unindent.
+
+At first, this error message will mean nothing to you, since you didn't edit
+that file. Until you look at line 8745 of the file in question:
+
+.. code-block:: rst
+
+   Description:
+      NetCDF is a set of software libraries and self-describing, machine-
+     independent data formats that support the creation, access, and sharing
+     of array-oriented scientific data.
+
+Our documentation includes :ref:`a list of all Spack packages <package-list>`.
+If you add a new package, its docstring is added to this page. The problem in
+this case was that the docstring looked like:
+
+.. code-block:: python
+
+   class Netcdf(Package):
+       """
+       NetCDF is a set of software libraries and self-describing,
+       machine-independent data formats that support the creation,
+       access, and sharing of array-oriented scientific data.
+       """
+
+Docstrings cannot start with a newline character, or else Sphinx will complain.
+Instead, they should look like:
+
+.. code-block:: python
+
+   class Netcdf(Package):
+       """NetCDF is a set of software libraries and self-describing,
+       machine-independent data formats that support the creation,
+       access, and sharing of array-oriented scientific data."""
+
+Documentation changes can result in much more obfuscated warning messages.
+If you don't understand what they mean, feel free to ask when you submit
+your PR.
 
 --------
 Coverage

lib/spack/docs/environments.rst

@@ -916,9 +916,9 @@ function, as shown in the example below:
 .. code-block:: yaml
 
    projections:
-     zlib: "{name}-{version}"
+     zlib: {name}-{version}
-     ^mpi: "{name}-{version}/{^mpi.name}-{^mpi.version}-{compiler.name}-{compiler.version}"
+     ^mpi: {name}-{version}/{^mpi.name}-{^mpi.version}-{compiler.name}-{compiler.version}
-     all: "{name}-{version}/{compiler.name}-{compiler.version}"
+     all: {name}-{version}/{compiler.name}-{compiler.version}
 
 The entries in the projections configuration file must all be either
 specs or the keyword ``all``. For each spec, the projection used will
@@ -1132,11 +1132,11 @@ index once every package is pushed. Note how this target uses the generated
    example/push/%: example/install/%
    	@mkdir -p $(dir $@)
    	$(info About to push $(SPEC) to a buildcache)
-   	$(SPACK) -e . buildcache push --allow-root --only=package $(BUILDCACHE_DIR) /$(HASH)
+   	$(SPACK) -e . buildcache create --allow-root --only=package --directory $(BUILDCACHE_DIR) /$(HASH)
    	@touch $@
 
    push: $(addprefix example/push/,$(example/SPACK_PACKAGE_IDS))
    	$(info Updating the buildcache index)
-   	$(SPACK) -e . buildcache update-index $(BUILDCACHE_DIR)
+   	$(SPACK) -e . buildcache update-index --directory $(BUILDCACHE_DIR)
    	$(info Done!)
    	@touch $@

lib/spack/docs/frequently_asked_questions.rst

@@ -1,77 +0,0 @@
-.. Copyright 2013-2023 Lawrence Livermore National Security, LLC and other
-   Spack Project Developers. See the top-level COPYRIGHT file for details.
-
-   SPDX-License-Identifier: (Apache-2.0 OR MIT)
-
-==========================
-Frequently Asked Questions
-==========================
-
-This page contains answers to frequently asked questions about Spack.
-If you have questions that are not answered here, feel free to ask on
-`Slack <https://slack.spack.io>`_ or `GitHub Discussions
-<https://github.com/spack/spack/discussions>`_. If you've learned the
-answer to a question that you think should be here, please consider
-contributing to this page.
-
-.. _faq-concretizer-precedence:
-
------------------------------------------------------
-Why does Spack pick particular versions and variants?
------------------------------------------------------
-
-This question comes up in a variety of forms:
-
- 1. Why does Spack seem to ignore my package preferences from ``packages.yaml`` config?
- 2. Why does Spack toggle a variant instead of using the default from the ``package.py`` file?
-
-The short answer is that Spack always picks an optimal configuration
-based on a complex set of criteria\ [#f1]_. These criteria are more nuanced
-than always choosing the latest versions or default variants.
-
-.. note::
-
-    As a rule of thumb: requirements + constraints > reuse > preferences > defaults.
-
-The following set of criteria (from lowest to highest precedence) explain
-common cases where concretization output may seem surprising at first.
-
-1. :ref:`Package preferences <package-preferences>` configured in ``packages.yaml``
-   override variant defaults from ``package.py`` files, and influence the optimal
-   ordering of versions. Preferences are specified as follows:
-
-   .. code-block:: yaml
-
-      packages:
-        foo:
-          version: [1.0, 1.1]
-          variants: ~mpi
-
-2. :ref:`Reuse concretization <concretizer-options>` configured in ``concretizer.yaml``
-   overrides preferences, since it's typically faster to reuse an existing spec than to
-   build a preferred one from sources. When build caches are enabled, specs may be reused
-   from a remote location too. Reuse concretization is configured as follows:
-
-   .. code-block:: yaml
-
-      concretizer:
-        reuse: dependencies  # other options are 'true' and 'false'
-
-3. :ref:`Package requirements <package-requirements>` configured in ``packages.yaml``,
-   and constraints from the command line as well as ``package.py`` files override all
-   of the above. Requirements are specified as follows:
-
-   .. code-block:: yaml
-
-      packages:
-        foo:
-          require:
-          - "@1.2: +mpi"
-
-Requirements and constraints restrict the set of possible solutions, while reuse
-behavior and preferences influence what an optimal solution looks like.
-
-
-.. rubric:: Footnotes
-
-.. [#f1] The exact list of criteria can be retrieved with the ``spack solve`` command

lib/spack/docs/getting_started.rst

@@ -317,7 +317,7 @@ installed, but you know that new compilers have been added to your
 
 .. code-block:: console
 
-   $ module load gcc/4.9.0
+   $ module load gcc-4.9.0
    $ spack compiler find
    ==> Added 1 new compiler to ~/.spack/linux/compilers.yaml
        gcc@4.9.0

lib/spack/docs/gpu_configuration.rst

@@ -1,113 +0,0 @@
-.. Copyright 2013-2023 Lawrence Livermore National Security, LLC and other
-   Spack Project Developers. See the top-level COPYRIGHT file for details.
-
-   SPDX-License-Identifier: (Apache-2.0 OR MIT)
-
-==========================
-Using External GPU Support
-==========================
-
-Many packages come with a ``+cuda`` or ``+rocm`` variant. With no added
-configuration Spack will download and install the needed components.
-It may be preferable to use existing system support: the following sections
-help with using a system installation of GPU libraries.
-
------------------------------------
-Using an External ROCm Installation
------------------------------------
-
-Spack breaks down ROCm into many separate component packages. The following
-is an example ``packages.yaml`` that organizes a consistent set of ROCm
-components for use by dependent packages:
-
-.. code-block:: yaml
-
-   packages:
-     all:
-       compiler: [rocmcc@=5.3.0]
-       variants: amdgpu_target=gfx90a
-     hip:
-       buildable: false
-       externals:
-       - spec: hip@5.3.0
-         prefix: /opt/rocm-5.3.0/hip
-     hsa-rocr-dev:
-       buildable: false
-       externals:
-       - spec: hsa-rocr-dev@5.3.0
-         prefix: /opt/rocm-5.3.0/
-     llvm-amdgpu:
-       buildable: false
-       externals:
-       - spec: llvm-amdgpu@5.3.0
-         prefix: /opt/rocm-5.3.0/llvm/
-     comgr:
-       buildable: false
-       externals:
-       - spec: comgr@5.3.0
-         prefix: /opt/rocm-5.3.0/
-     hipsparse:
-       buildable: false
-       externals:
-       - spec: hipsparse@5.3.0
-         prefix: /opt/rocm-5.3.0/
-     hipblas:
-       buildable: false
-       externals:
-       - spec: hipblas@5.3.0
-         prefix: /opt/rocm-5.3.0/
-     rocblas:
-       buildable: false
-       externals:
-       - spec: rocblas@5.3.0
-         prefix: /opt/rocm-5.3.0/
-     rocprim:
-       buildable: false
-       externals:
-       - spec: rocprim@5.3.0
-         prefix: /opt/rocm-5.3.0/rocprim/
-
-This is in combination with the following compiler definition:
-
-.. code-block:: yaml
-
-   compilers:
-   - compiler:
-       spec: rocmcc@=5.3.0
-       paths:
-         cc: /opt/rocm-5.3.0/bin/amdclang
-         cxx: /opt/rocm-5.3.0/bin/amdclang++
-         f77: null
-         fc: /opt/rocm-5.3.0/bin/amdflang
-       operating_system: rhel8
-       target: x86_64
-
-This includes the following considerations:
-
-- Each of the listed externals specifies ``buildable: false`` to force Spack
-  to use only the externals we defined.
-- ``spack external find`` can automatically locate some of the ``hip``/``rocm``
-  packages, but not all of them, and furthermore not in a manner that
-  guarantees a complementary set if multiple ROCm installations are available.
-- The ``prefix`` is the same for several components, but note that others
-  require listing one of the subdirectories as a prefix.
-
------------------------------------
-Using an External CUDA Installation
------------------------------------
-
-CUDA is split into fewer components and is simpler to specify:
-
-.. code-block:: yaml
-
-   packages:
-     all:
-       variants:
-       - cuda_arch=70
-     cuda:
-       buildable: false
-       externals:
-       - spec: cuda@11.0.2
-         prefix: /opt/cuda/cuda-11.0.2/
-
-where ``/opt/cuda/cuda-11.0.2/lib/`` contains ``libcudart.so``.

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lib/spack/docs/index.rst

@@ -54,16 +54,8 @@ or refer to the full manual below.
    features
    getting_started
    basic_usage
+   Tutorial: Spack 101 <https://spack-tutorial.readthedocs.io>
    replace_conda_homebrew
-   frequently_asked_questions
-
-.. toctree::
-   :maxdepth: 2
-   :caption: Links
-
-   Tutorial (spack-tutorial.rtfd.io) <https://spack-tutorial.readthedocs.io>
-   Packages (packages.spack.io) <https://packages.spack.io>
-   Binaries (binaries.spack.io) <https://cache.spack.io>
 
 .. toctree::
    :maxdepth: 2
@@ -71,7 +63,7 @@ or refer to the full manual below.
 
    configuration
    config_yaml
-   packages_yaml
+   bootstrapping
    build_settings
    environments
    containers
@@ -79,13 +71,11 @@ or refer to the full manual below.
    module_file_support
    repositories
    binary_caches
-   bootstrapping
    command_index
+   package_list
    chain
    extensions
    pipelines
-   signing
-   gpu_configuration
 
 .. toctree::
    :maxdepth: 2

lib/spack/docs/module_file_support.rst

@@ -35,27 +35,27 @@ showing lots of installed packages:
    $ module avail
 
    --------------------------------------------------------------- ~/spack/share/spack/modules/linux-ubuntu14-x86_64 ---------------------------------------------------------------
-   autoconf/2.69-gcc-4.8-qextxkq       hwloc/1.11.6-gcc-6.3.0-akcisez             m4/1.4.18-gcc-4.8-ev2znoc                   openblas/0.2.19-gcc-6.3.0-dhkmed6        py-setuptools/34.2.0-gcc-6.3.0-fadur4s
+   autoconf-2.69-gcc-4.8-qextxkq       hwloc-1.11.6-gcc-6.3.0-akcisez             m4-1.4.18-gcc-4.8-ev2znoc                   openblas-0.2.19-gcc-6.3.0-dhkmed6        py-setuptools-34.2.0-gcc-6.3.0-fadur4s
-   automake/1.15-gcc-4.8-maqvukj       isl/0.18-gcc-4.8-afi6taq                   m4/1.4.18-gcc-6.3.0-uppywnz                 openmpi/2.1.0-gcc-6.3.0-go2s4z5          py-six/1.10.0-gcc-6.3.0-p4dhkaw
+   automake-1.15-gcc-4.8-maqvukj       isl-0.18-gcc-4.8-afi6taq                   m4-1.4.18-gcc-6.3.0-uppywnz                 openmpi-2.1.0-gcc-6.3.0-go2s4z5          py-six-1.10.0-gcc-6.3.0-p4dhkaw
-   binutils/2.28-gcc-4.8-5s7c6rs       libiconv/1.15-gcc-4.8-at46wg3              mawk/1.3.4-gcc-4.8-acjez57                  openssl/1.0.2k-gcc-4.8-dkls5tk           python/2.7.13-gcc-6.3.0-tyehea7
+   binutils-2.28-gcc-4.8-5s7c6rs       libiconv-1.15-gcc-4.8-at46wg3              mawk-1.3.4-gcc-4.8-acjez57                  openssl-1.0.2k-gcc-4.8-dkls5tk           python-2.7.13-gcc-6.3.0-tyehea7
-   bison/3.0.4-gcc-4.8-ek4luo5         libpciaccess/0.13.4-gcc-6.3.0-gmufnvh      mawk/1.3.4-gcc-6.3.0-ostdoms                openssl/1.0.2k-gcc-6.3.0-gxgr5or         readline/7.0-gcc-4.8-xhufqhn
+   bison-3.0.4-gcc-4.8-ek4luo5         libpciaccess-0.13.4-gcc-6.3.0-gmufnvh      mawk-1.3.4-gcc-6.3.0-ostdoms                openssl-1.0.2k-gcc-6.3.0-gxgr5or         readline-7.0-gcc-4.8-xhufqhn
-   bzip2/1.0.6-gcc-4.8-iffrxzn         libsigsegv/2.11-gcc-4.8-pp2cvte            mpc/1.0.3-gcc-4.8-g5mztc5                   pcre/8.40-gcc-4.8-r5pbrxb                readline/7.0-gcc-6.3.0-zzcyicg
+   bzip2-1.0.6-gcc-4.8-iffrxzn         libsigsegv-2.11-gcc-4.8-pp2cvte            mpc-1.0.3-gcc-4.8-g5mztc5                   pcre-8.40-gcc-4.8-r5pbrxb                readline-7.0-gcc-6.3.0-zzcyicg
-   bzip2/1.0.6-gcc-6.3.0-bequudr       libsigsegv/2.11-gcc-6.3.0-7enifnh          mpfr/3.1.5-gcc-4.8-o7xm7az                  perl/5.24.1-gcc-4.8-dg5j65u              sqlite/3.8.5-gcc-6.3.0-6zoruzj
+   bzip2-1.0.6-gcc-6.3.0-bequudr       libsigsegv-2.11-gcc-6.3.0-7enifnh          mpfr-3.1.5-gcc-4.8-o7xm7az                  perl-5.24.1-gcc-4.8-dg5j65u              sqlite-3.8.5-gcc-6.3.0-6zoruzj
-   cmake/3.7.2-gcc-6.3.0-fowuuby       libtool/2.4.6-gcc-4.8-7a523za              mpich/3.2-gcc-6.3.0-dmvd3aw                 perl/5.24.1-gcc-6.3.0-6uzkpt6            tar/1.29-gcc-4.8-wse2ass
+   cmake-3.7.2-gcc-6.3.0-fowuuby       libtool-2.4.6-gcc-4.8-7a523za              mpich-3.2-gcc-6.3.0-dmvd3aw                 perl-5.24.1-gcc-6.3.0-6uzkpt6            tar-1.29-gcc-4.8-wse2ass
-   curl/7.53.1-gcc-4.8-3fz46n6         libtool/2.4.6-gcc-6.3.0-n7zmbzt            ncurses/6.0-gcc-4.8-dcpe7ia                 pkg-config/0.29.2-gcc-4.8-ib33t75        tcl/8.6.6-gcc-4.8-tfxzqbr
+   curl-7.53.1-gcc-4.8-3fz46n6         libtool-2.4.6-gcc-6.3.0-n7zmbzt            ncurses-6.0-gcc-4.8-dcpe7ia                 pkg-config-0.29.2-gcc-4.8-ib33t75        tcl-8.6.6-gcc-4.8-tfxzqbr
-   expat/2.2.0-gcc-4.8-mrv6bd4         libxml2/2.9.4-gcc-4.8-ryzxnsu              ncurses/6.0-gcc-6.3.0-ucbhcdy               pkg-config/0.29.2-gcc-6.3.0-jpgubk3      util-macros/1.19.1-gcc-6.3.0-xorz2x2
+   expat-2.2.0-gcc-4.8-mrv6bd4         libxml2-2.9.4-gcc-4.8-ryzxnsu              ncurses-6.0-gcc-6.3.0-ucbhcdy               pkg-config-0.29.2-gcc-6.3.0-jpgubk3      util-macros-1.19.1-gcc-6.3.0-xorz2x2
-   flex/2.6.3-gcc-4.8-yf345oo          libxml2/2.9.4-gcc-6.3.0-rltzsdh            netlib-lapack/3.6.1-gcc-6.3.0-js33dog       py-appdirs/1.4.0-gcc-6.3.0-jxawmw7       xz/5.2.3-gcc-4.8-mew4log
+   flex-2.6.3-gcc-4.8-yf345oo          libxml2-2.9.4-gcc-6.3.0-rltzsdh            netlib-lapack-3.6.1-gcc-6.3.0-js33dog       py-appdirs-1.4.0-gcc-6.3.0-jxawmw7       xz-5.2.3-gcc-4.8-mew4log
-   gcc/6.3.0-gcc-4.8-24puqve           lmod/7.4.1-gcc-4.8-je4srhr                 netlib-scalapack/2.0.2-gcc-6.3.0-5aidk4l    py-numpy/1.12.0-gcc-6.3.0-oemmoeu        xz/5.2.3-gcc-6.3.0-3vqeuvb
+   gcc-6.3.0-gcc-4.8-24puqve           lmod-7.4.1-gcc-4.8-je4srhr                 netlib-scalapack-2.0.2-gcc-6.3.0-5aidk4l    py-numpy-1.12.0-gcc-6.3.0-oemmoeu        xz-5.2.3-gcc-6.3.0-3vqeuvb
-   gettext/0.19.8.1-gcc-4.8-yymghlh    lua/5.3.4-gcc-4.8-im75yaz                  netlib-scalapack/2.0.2-gcc-6.3.0-hjsemcn    py-packaging/16.8-gcc-6.3.0-i2n3dtl      zip/3.0-gcc-4.8-rwar22d
+   gettext-0.19.8.1-gcc-4.8-yymghlh    lua-5.3.4-gcc-4.8-im75yaz                  netlib-scalapack-2.0.2-gcc-6.3.0-hjsemcn    py-packaging-16.8-gcc-6.3.0-i2n3dtl      zip-3.0-gcc-4.8-rwar22d
-   gmp/6.1.2-gcc-4.8-5ub2wu5           lua-luafilesystem/1_6_3-gcc-4.8-wkey3nl    netlib-scalapack/2.0.2-gcc-6.3.0-jva724b    py-pyparsing/2.1.10-gcc-6.3.0-tbo6gmw    zlib/1.2.11-gcc-4.8-pgxsxv7
+   gmp-6.1.2-gcc-4.8-5ub2wu5           lua-luafilesystem-1_6_3-gcc-4.8-wkey3nl    netlib-scalapack-2.0.2-gcc-6.3.0-jva724b    py-pyparsing-2.1.10-gcc-6.3.0-tbo6gmw    zlib-1.2.11-gcc-4.8-pgxsxv7
-   help2man/1.47.4-gcc-4.8-kcnqmau     lua-luaposix/33.4.0-gcc-4.8-mdod2ry        netlib-scalapack/2.0.2-gcc-6.3.0-rgqfr6d    py-scipy/0.19.0-gcc-6.3.0-kr7nat4        zlib/1.2.11-gcc-6.3.0-7cqp6cj
+   help2man-1.47.4-gcc-4.8-kcnqmau     lua-luaposix-33.4.0-gcc-4.8-mdod2ry        netlib-scalapack-2.0.2-gcc-6.3.0-rgqfr6d    py-scipy-0.19.0-gcc-6.3.0-kr7nat4        zlib-1.2.11-gcc-6.3.0-7cqp6cj
 
 The names should look familiar, as they resemble the output from ``spack find``.
 For example, you could type the following command to load the ``cmake`` module:
 
 .. code-block:: console
 
-   $ module load cmake/3.7.2-gcc-6.3.0-fowuuby
+   $ module load cmake-3.7.2-gcc-6.3.0-fowuuby
 
 Neither of these is particularly pretty, easy to remember, or easy to
 type. Luckily, Spack offers many facilities for customizing the module
@@ -275,12 +275,10 @@ of the installed software. For instance, in the snippet below:
              set:
                BAR: 'bar'
          # This anonymous spec selects any package that
-         # depends on mpi. The double colon at the
+         # depends on openmpi. The double colon at the
          # end clears the set of rules that matched so far.
-         ^mpi::
+         ^openmpi::
            environment:
-             prepend_path:
-               PATH: '{^mpi.prefix}/bin'
              set:
                BAR: 'baz'
          # Selects any zlib package
@@ -295,9 +293,7 @@ of the installed software. For instance, in the snippet below:
              - FOOBAR
 
 you are instructing Spack to set the environment variable ``BAR=bar`` for every module,
-unless the associated spec satisfies the abstract dependency ``^mpi`` in which case
+unless the associated spec satisfies ``^openmpi`` in which case ``BAR=baz``.
-``BAR=baz``, and the directory containing the respective MPI executables is prepended
-to the ``PATH`` variable.
 In addition in any spec that satisfies ``zlib`` the value ``foo`` will be
 prepended to ``LD_LIBRARY_PATH`` and in any spec that satisfies ``zlib%gcc@4.8``
 the variable ``FOOBAR`` will be unset.
@@ -400,30 +396,28 @@ that are already in the Lmod hierarchy.
 
 
 .. note::
-   Tcl and Lua modules also allow for explicit conflicts between modulefiles.
+   Tcl modules
+     Tcl modules also allow for explicit conflicts between modulefiles.
 
-   .. code-block:: yaml
+     .. code-block:: yaml
 
-      modules:
+        modules:
-        default:
+          default:
-          enable:
+            enable:
-            - tcl
+              - tcl
-          tcl:
+            tcl:
-            projections:
+              projections:
-              all: '{name}/{version}-{compiler.name}-{compiler.version}'
+                all: '{name}/{version}-{compiler.name}-{compiler.version}'
-            all:
+              all:
-              conflict:
+                conflict:
-                - '{name}'
+                  - '{name}'
-                - 'intel/14.0.1'
+                  - 'intel/14.0.1'
 
-   will create module files that will conflict with ``intel/14.0.1`` and with the
+     will create module files that will conflict with ``intel/14.0.1`` and with the
-   base directory of the same module, effectively preventing the possibility to
+     base directory of the same module, effectively preventing the possibility to
-   load two or more versions of the same software at the same time. The tokens
+     load two or more versions of the same software at the same time. The tokens
-   that are available for use in this directive are the same understood by the
+     that are available for use in this directive are the same understood by
-   :meth:`~spack.spec.Spec.format` method.
+     the :meth:`~spack.spec.Spec.format` method.
-
-   For Lmod and Environment Modules versions prior 4.2, it is important to
-   express the conflict on both modulefiles conflicting with each other.
 
 
 .. note::
@@ -519,11 +513,11 @@ inspections and customize them per-module-set.
 
   modules:
     prefix_inspections:
-      ./bin:
+      bin:
         - PATH
-      ./man:
+      man:
         - MANPATH
-      ./:
+      '':
         - CMAKE_PREFIX_PATH
 
 Prefix inspections are only applied if the relative path inside the
@@ -579,7 +573,7 @@ the view.
        view_relative_modules:
          use_view: my_view
        prefix_inspections:
-         ./bin:
+         bin:
            - PATH
      view:
        my_view:
@@ -785,35 +779,35 @@ cut-and-pasted into a shell script.  For example:
 
     $ spack module tcl loads --dependencies py-numpy git
     # bzip2@1.0.6%gcc@4.9.3=linux-x86_64
-    module load bzip2/1.0.6-gcc-4.9.3-ktnrhkrmbbtlvnagfatrarzjojmkvzsx
+    module load bzip2-1.0.6-gcc-4.9.3-ktnrhkrmbbtlvnagfatrarzjojmkvzsx
     # ncurses@6.0%gcc@4.9.3=linux-x86_64
-    module load ncurses/6.0-gcc-4.9.3-kaazyneh3bjkfnalunchyqtygoe2mncv
+    module load ncurses-6.0-gcc-4.9.3-kaazyneh3bjkfnalunchyqtygoe2mncv
     # zlib@1.2.8%gcc@4.9.3=linux-x86_64
-    module load zlib/1.2.8-gcc-4.9.3-v3ufwaahjnviyvgjcelo36nywx2ufj7z
+    module load zlib-1.2.8-gcc-4.9.3-v3ufwaahjnviyvgjcelo36nywx2ufj7z
     # sqlite@3.8.5%gcc@4.9.3=linux-x86_64
-    module load sqlite/3.8.5-gcc-4.9.3-a3eediswgd5f3rmto7g3szoew5nhehbr
+    module load sqlite-3.8.5-gcc-4.9.3-a3eediswgd5f3rmto7g3szoew5nhehbr
     # readline@6.3%gcc@4.9.3=linux-x86_64
-    module load readline/6.3-gcc-4.9.3-se6r3lsycrwxyhreg4lqirp6xixxejh3
+    module load readline-6.3-gcc-4.9.3-se6r3lsycrwxyhreg4lqirp6xixxejh3
     # python@3.5.1%gcc@4.9.3=linux-x86_64
-    module load python/3.5.1-gcc-4.9.3-5q5rsrtjld4u6jiicuvtnx52m7tfhegi
+    module load python-3.5.1-gcc-4.9.3-5q5rsrtjld4u6jiicuvtnx52m7tfhegi
     # py-setuptools@20.5%gcc@4.9.3=linux-x86_64
-    module load py-setuptools/20.5-gcc-4.9.3-4qr2suj6p6glepnedmwhl4f62x64wxw2
+    module load py-setuptools-20.5-gcc-4.9.3-4qr2suj6p6glepnedmwhl4f62x64wxw2
     # py-nose@1.3.7%gcc@4.9.3=linux-x86_64
-    module load py-nose/1.3.7-gcc-4.9.3-pwhtjw2dvdvfzjwuuztkzr7b4l6zepli
+    module load py-nose-1.3.7-gcc-4.9.3-pwhtjw2dvdvfzjwuuztkzr7b4l6zepli
     # openblas@0.2.17%gcc@4.9.3+shared=linux-x86_64
-    module load openblas/0.2.17-gcc-4.9.3-pw6rmlom7apfsnjtzfttyayzc7nx5e7y
+    module load openblas-0.2.17-gcc-4.9.3-pw6rmlom7apfsnjtzfttyayzc7nx5e7y
     # py-numpy@1.11.0%gcc@4.9.3+blas+lapack=linux-x86_64
-    module load py-numpy/1.11.0-gcc-4.9.3-mulodttw5pcyjufva4htsktwty4qd52r
+    module load py-numpy-1.11.0-gcc-4.9.3-mulodttw5pcyjufva4htsktwty4qd52r
     # curl@7.47.1%gcc@4.9.3=linux-x86_64
-    module load curl/7.47.1-gcc-4.9.3-ohz3fwsepm3b462p5lnaquv7op7naqbi
+    module load curl-7.47.1-gcc-4.9.3-ohz3fwsepm3b462p5lnaquv7op7naqbi
     # autoconf@2.69%gcc@4.9.3=linux-x86_64
-    module load autoconf/2.69-gcc-4.9.3-bkibjqhgqm5e3o423ogfv2y3o6h2uoq4
+    module load autoconf-2.69-gcc-4.9.3-bkibjqhgqm5e3o423ogfv2y3o6h2uoq4
     # cmake@3.5.0%gcc@4.9.3~doc+ncurses+openssl~qt=linux-x86_64
-    module load cmake/3.5.0-gcc-4.9.3-x7xnsklmgwla3ubfgzppamtbqk5rwn7t
+    module load cmake-3.5.0-gcc-4.9.3-x7xnsklmgwla3ubfgzppamtbqk5rwn7t
     # expat@2.1.0%gcc@4.9.3=linux-x86_64
-    module load expat/2.1.0-gcc-4.9.3-6pkz2ucnk2e62imwakejjvbv6egncppd
+    module load expat-2.1.0-gcc-4.9.3-6pkz2ucnk2e62imwakejjvbv6egncppd
     # git@2.8.0-rc2%gcc@4.9.3+curl+expat=linux-x86_64
-    module load git/2.8.0-rc2-gcc-4.9.3-3bib4hqtnv5xjjoq5ugt3inblt4xrgkd
+    module load git-2.8.0-rc2-gcc-4.9.3-3bib4hqtnv5xjjoq5ugt3inblt4xrgkd
 
 The script may be further edited by removing unnecessary modules.
 
@@ -832,12 +826,12 @@ For example, consider the following on one system:
 .. code-block:: console
 
     $ module avail
-    linux-SuSE11-x86_64/antlr/2.7.7-gcc-5.3.0-bdpl46y
+    linux-SuSE11-x86_64/antlr-2.7.7-gcc-5.3.0-bdpl46y
 
     $ spack module tcl loads antlr    # WRONG!
     # antlr@2.7.7%gcc@5.3.0~csharp+cxx~java~python arch=linux-SuSE11-x86_64
-    module load antlr/2.7.7-gcc-5.3.0-bdpl46y
+    module load antlr-2.7.7-gcc-5.3.0-bdpl46y
 
     $ spack module tcl loads --prefix linux-SuSE11-x86_64/ antlr
     # antlr@2.7.7%gcc@5.3.0~csharp+cxx~java~python arch=linux-SuSE11-x86_64
-    module load linux-SuSE11-x86_64/antlr/2.7.7-gcc-5.3.0-bdpl46y
+    module load linux-SuSE11-x86_64/antlr-2.7.7-gcc-5.3.0-bdpl46y

lib/spack/docs/package_list.rst

@@ -0,0 +1,17 @@
+.. Copyright 2013-2023 Lawrence Livermore National Security, LLC and other
+   Spack Project Developers. See the top-level COPYRIGHT file for details.
+
+   SPDX-License-Identifier: (Apache-2.0 OR MIT)
+
+.. _package-list:
+
+============
+Package List
+============
+
+This is a list of things you can install using Spack.  It is
+automatically generated based on the packages in this Spack
+version.
+
+.. raw:: html
+   :file: package_list.html

lib/spack/docs/packages_yaml.rst

@@ -1,591 +0,0 @@
-.. Copyright 2013-2023 Lawrence Livermore National Security, LLC and other
-   Spack Project Developers. See the top-level COPYRIGHT file for details.
-
-   SPDX-License-Identifier: (Apache-2.0 OR MIT)
-
-
-.. _packages-config:
-
-================================
-Package Settings (packages.yaml)
-================================
-
-Spack allows you to customize how your software is built through the
-``packages.yaml`` file.  Using it, you can make Spack prefer particular
-implementations of virtual dependencies (e.g., MPI or BLAS/LAPACK),
-or you can make it prefer to build with particular compilers.  You can
-also tell Spack to use *external* software installations already
-present on your system.
-
-At a high level, the ``packages.yaml`` file is structured like this:
-
-.. code-block:: yaml
-
-   packages:
-     package1:
-       # settings for package1
-     package2:
-       # settings for package2
-     # ...
-     all:
-       # settings that apply to all packages.
-
-So you can either set build preferences specifically for *one* package,
-or you can specify that certain settings should apply to *all* packages.
-The types of settings you can customize are described in detail below.
-
-Spack's build defaults are in the default
-``etc/spack/defaults/packages.yaml`` file.  You can override them in
-``~/.spack/packages.yaml`` or ``etc/spack/packages.yaml``. For more
-details on how this works, see :ref:`configuration-scopes`.
-
-.. _sec-external-packages:
-
------------------
-External Packages
------------------
-
-Spack can be configured to use externally-installed
-packages rather than building its own packages. This may be desirable
-if machines ship with system packages, such as a customized MPI
-that should be used instead of Spack building its own MPI.
-
-External packages are configured through the ``packages.yaml`` file.
-Here's an example of an external configuration:
-
-.. code-block:: yaml
-
-   packages:
-     openmpi:
-       externals:
-       - spec: "openmpi@1.4.3%gcc@4.4.7 arch=linux-debian7-x86_64"
-         prefix: /opt/openmpi-1.4.3
-       - spec: "openmpi@1.4.3%gcc@4.4.7 arch=linux-debian7-x86_64+debug"
-         prefix: /opt/openmpi-1.4.3-debug
-       - spec: "openmpi@1.6.5%intel@10.1 arch=linux-debian7-x86_64"
-         prefix: /opt/openmpi-1.6.5-intel
-
-This example lists three installations of OpenMPI, one built with GCC,
-one built with GCC and debug information, and another built with Intel.
-If Spack is asked to build a package that uses one of these MPIs as a
-dependency, it will use the pre-installed OpenMPI in
-the given directory. Note that the specified path is the top-level
-install prefix, not the ``bin`` subdirectory.
-
-``packages.yaml`` can also be used to specify modules to load instead
-of the installation prefixes.  The following example says that module
-``CMake/3.7.2`` provides cmake version 3.7.2.
-
-.. code-block:: yaml
-
-   cmake:
-     externals:
-     - spec: cmake@3.7.2
-       modules:
-       - CMake/3.7.2
-
-Each ``packages.yaml`` begins with a ``packages:`` attribute, followed
-by a list of package names.  To specify externals, add an ``externals:``
-attribute under the package name, which lists externals.
-Each external should specify a ``spec:`` string that should be as
-well-defined as reasonably possible.  If a
-package lacks a spec component, such as missing a compiler or
-package version, then Spack will guess the missing component based
-on its most-favored packages, and it may guess incorrectly.
-
-Each package version and compiler listed in an external should
-have entries in Spack's packages and compiler configuration, even
-though the package and compiler may not ever be built.
-
-^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
-Prevent packages from being built from sources
-^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
-
-Adding an external spec in ``packages.yaml`` allows Spack to use an external location,
-but it does not prevent Spack from building packages from sources. In the above example,
-Spack might choose for many valid reasons to start building and linking with the
-latest version of OpenMPI rather than continue using the pre-installed OpenMPI versions.
-
-To prevent this, the ``packages.yaml`` configuration also allows packages
-to be flagged as non-buildable.  The previous example could be modified to
-be:
-
-.. code-block:: yaml
-
-   packages:
-     openmpi:
-       externals:
-       - spec: "openmpi@1.4.3%gcc@4.4.7 arch=linux-debian7-x86_64"
-         prefix: /opt/openmpi-1.4.3
-       - spec: "openmpi@1.4.3%gcc@4.4.7 arch=linux-debian7-x86_64+debug"
-         prefix: /opt/openmpi-1.4.3-debug
-       - spec: "openmpi@1.6.5%intel@10.1 arch=linux-debian7-x86_64"
-         prefix: /opt/openmpi-1.6.5-intel
-       buildable: False
-
-The addition of the ``buildable`` flag tells Spack that it should never build
-its own version of OpenMPI from sources, and it will instead always rely on a pre-built
-OpenMPI.
-
-.. note::
-
-   If ``concretizer:reuse`` is on (see :ref:`concretizer-options` for more information on that flag)
-   pre-built specs include specs already available from a local store, an upstream store, a registered
-   buildcache or specs marked as externals in ``packages.yaml``. If ``concretizer:reuse`` is off, only
-   external specs in ``packages.yaml`` are included in the list of pre-built specs.
-
-If an external module is specified as not buildable, then Spack will load the
-external module into the build environment which can be used for linking.
-
-The ``buildable`` does not need to be paired with external packages.
-It could also be used alone to forbid packages that may be
-buggy or otherwise undesirable.
-
-^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
-Non-buildable virtual packages
-^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
-
-Virtual packages in Spack can also be specified as not buildable, and
-external implementations can be provided. In the example above,
-OpenMPI is configured as not buildable, but Spack will often prefer
-other MPI implementations over the externally available OpenMPI. Spack
-can be configured with every MPI provider not buildable individually,
-but more conveniently:
-
-.. code-block:: yaml
-
-   packages:
-     mpi:
-       buildable: False
-     openmpi:
-       externals:
-       - spec: "openmpi@1.4.3%gcc@4.4.7 arch=linux-debian7-x86_64"
-         prefix: /opt/openmpi-1.4.3
-       - spec: "openmpi@1.4.3%gcc@4.4.7 arch=linux-debian7-x86_64+debug"
-         prefix: /opt/openmpi-1.4.3-debug
-       - spec: "openmpi@1.6.5%intel@10.1 arch=linux-debian7-x86_64"
-         prefix: /opt/openmpi-1.6.5-intel
-
-Spack can then use any of the listed external implementations of MPI
-to satisfy a dependency, and will choose depending on the compiler and
-architecture.
-
-In cases where the concretizer is configured to reuse specs, and other ``mpi`` providers
-(available via stores or buildcaches) are not wanted, Spack can be configured to require
-specs matching only the available externals:
-
-.. code-block:: yaml
-
-   packages:
-     mpi:
-       buildable: False
-       require:
-       - one_of: [
-           "openmpi@1.4.3%gcc@4.4.7 arch=linux-debian7-x86_64",
-           "openmpi@1.4.3%gcc@4.4.7 arch=linux-debian7-x86_64+debug",
-           "openmpi@1.6.5%intel@10.1 arch=linux-debian7-x86_64"
-         ]
-     openmpi:
-       externals:
-       - spec: "openmpi@1.4.3%gcc@4.4.7 arch=linux-debian7-x86_64"
-         prefix: /opt/openmpi-1.4.3
-       - spec: "openmpi@1.4.3%gcc@4.4.7 arch=linux-debian7-x86_64+debug"
-         prefix: /opt/openmpi-1.4.3-debug
-       - spec: "openmpi@1.6.5%intel@10.1 arch=linux-debian7-x86_64"
-         prefix: /opt/openmpi-1.6.5-intel
-
-This configuration prevents any spec using MPI and originating from stores or buildcaches to be reused,
-unless it matches the requirements under ``packages:mpi:require``. For more information on requirements see
-:ref:`package-requirements`.
-
-.. _cmd-spack-external-find:
-
-^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
-Automatically Find External Packages
-^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
-
-You can run the :ref:`spack external find <spack-external-find>` command
-to search for system-provided packages and add them to ``packages.yaml``.
-After running this command your ``packages.yaml`` may include new entries:
-
-.. code-block:: yaml
-
-   packages:
-     cmake:
-       externals:
-       - spec: cmake@3.17.2
-         prefix: /usr
-
-Generally this is useful for detecting a small set of commonly-used packages;
-for now this is generally limited to finding build-only dependencies.
-Specific limitations include:
-
-* Packages are not discoverable by default: For a package to be
-  discoverable with ``spack external find``, it needs to add special
-  logic. See :ref:`here <make-package-findable>` for more details.
-* The logic does not search through module files, it can only detect
-  packages with executables defined in ``PATH``; you can help Spack locate
-  externals which use module files by loading any associated modules for
-  packages that you want Spack to know about before running
-  ``spack external find``.
-* Spack does not overwrite existing entries in the package configuration:
-  If there is an external defined for a spec at any configuration scope,
-  then Spack will not add a new external entry (``spack config blame packages``
-  can help locate all external entries).
-
-.. _package-requirements:
-
---------------------
-Package Requirements
---------------------
-
-Spack can be configured to always use certain compilers, package
-versions, and variants during concretization through package
-requirements.
-
-Package requirements are useful when you find yourself repeatedly
-specifying the same constraints on the command line, and wish that
-Spack respects these constraints whether you mention them explicitly
-or not. Another use case is specifying constraints that should apply
-to all root specs in an environment, without having to repeat the
-constraint everywhere.
-
-Apart from that, requirements config is more flexible than constraints
-on the command line, because it can specify constraints on packages
-*when they occur* as a dependency. In contrast, on the command line it
-is not possible to specify constraints on dependencies while also keeping
-those dependencies optional.
-
-.. seealso::
-
-   FAQ: :ref:`Why does Spack pick particular versions and variants? <faq-concretizer-precedence>`
-
-
-^^^^^^^^^^^^^^^^^^^
-Requirements syntax
-^^^^^^^^^^^^^^^^^^^
-
-The package requirements configuration is specified in ``packages.yaml``,
-keyed by package name and expressed using the Spec syntax. In the simplest
-case you can specify attributes that you always want the package to have
-by providing a single spec string to ``require``:
-
-.. code-block:: yaml
-
-   packages:
-     libfabric:
-       require: "@1.13.2"
-
-In the above example, ``libfabric`` will always build with version 1.13.2. If you
-need to compose multiple configuration scopes ``require`` accepts a list of
-strings:
-
-.. code-block:: yaml
-
-   packages:
-     libfabric:
-       require:
-       - "@1.13.2"
-       - "%gcc"
-
-In this case ``libfabric`` will always build with version 1.13.2 **and** using GCC
-as a compiler.
-
-For more complex use cases, require accepts also a list of objects. These objects
-must have either a ``any_of`` or a ``one_of`` field, containing a list of spec strings,
-and they can optionally have a ``when`` and a ``message`` attribute:
-
-.. code-block:: yaml
-
-   packages:
-     openmpi:
-       require:
-       - any_of: ["@4.1.5", "%gcc"]
-         message: "in this example only 4.1.5 can build with other compilers"
-
-``any_of`` is a list of specs. One of those specs must be satisfied
-and it is also allowed for the concretized spec to match more than one.
-In the above example, that means you could build ``openmpi@4.1.5%gcc``,
-``openmpi@4.1.5%clang`` or ``openmpi@3.9%gcc``, but
-not ``openmpi@3.9%clang``.
-
-If a custom message is provided, and the requirement is not satisfiable,
-Spack will print the custom error message:
-
-.. code-block:: console
-
-   $ spack spec openmpi@3.9%clang
-   ==> Error: in this example only 4.1.5 can build with other compilers
-
-We could express a similar requirement using the ``when`` attribute:
-
-.. code-block:: yaml
-
-   packages:
-     openmpi:
-       require:
-       - any_of: ["%gcc"]
-         when: "@:4.1.4"
-         message: "in this example only 4.1.5 can build with other compilers"
-
-In the example above, if the version turns out to be 4.1.4 or less, we require the compiler to be GCC.
-For readability, Spack also allows a ``spec`` key accepting a string when there is only a single
-constraint:
-
-.. code-block:: yaml
-
-   packages:
-     openmpi:
-       require:
-       - spec: "%gcc"
-         when: "@:4.1.4"
-         message: "in this example only 4.1.5 can build with other compilers"
-
-This code snippet and the one before it are semantically equivalent.
-
-Finally, instead of ``any_of`` you can use ``one_of`` which also takes a list of specs. The final
-concretized spec must match one and only one of them:
-
-.. code-block:: yaml
-
-   packages:
-     mpich:
-       require:
-       - one_of: ["+cuda", "+rocm"]
-
-In the example above, that means you could build ``mpich+cuda`` or ``mpich+rocm`` but not ``mpich+cuda+rocm``.
-
-.. note::
-
-   For ``any_of`` and ``one_of``, the order of specs indicates a
-   preference: items that appear earlier in the list are preferred
-   (note that these preferences can be ignored in favor of others).
-
-.. note::
-
-   When using a conditional requirement, Spack is allowed to actively avoid the triggering
-   condition (the ``when=...`` spec) if that leads to a concrete spec with better scores in
-   the optimization criteria. To check the current optimization criteria and their
-   priorities you can run ``spack solve zlib``.
-
-^^^^^^^^^^^^^^^^^^^^^^^^^^^^
-Setting default requirements
-^^^^^^^^^^^^^^^^^^^^^^^^^^^^
-
-You can also set default requirements for all packages under ``all``
-like this:
-
-.. code-block:: yaml
-
-   packages:
-     all:
-       require: '%clang'
-
-which means every spec will be required to use ``clang`` as a compiler.
-
-Requirements on variants for all packages are possible too, but note that they
-are only enforced for those packages that define these variants, otherwise they
-are disregarded. For example:
-
-.. code-block:: yaml
-
-   packages:
-     all:
-       require:
-       - "+shared"
-       - "+cuda"
-
-will just enforce ``+shared`` on ``zlib``, which has a boolean ``shared`` variant but
-no ``cuda`` variant.
-
-Constraints in a single spec literal are always considered as a whole, so in a case like:
-
-.. code-block:: yaml
-
-   packages:
-     all:
-       require: "+shared +cuda"
-
-the default requirement will be enforced only if a package has both a ``cuda`` and
-a ``shared`` variant, and will never be partially enforced.
-
-Finally, ``all`` represents a *default set of requirements* -
-if there are specific package requirements, then the default requirements
-under ``all`` are disregarded. For example, with a configuration like this:
-
-.. code-block:: yaml
-
-   packages:
-     all:
-       require:
-       - 'build_type=Debug'
-       - '%clang'
-     cmake:
-       require:
-       - 'build_type=Debug'
-       - '%gcc'
-
-Spack requires ``cmake`` to use ``gcc`` and all other nodes (including ``cmake``
-dependencies) to use ``clang``. If enforcing ``build_type=Debug`` is needed also
-on ``cmake``, it must be repeated in the specific ``cmake`` requirements.
-
-
-^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
-Setting requirements on virtual specs
-^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
-
-A requirement on a virtual spec applies whenever that virtual is present in the DAG.
-This can be useful for fixing which virtual provider you want to use:
-
-.. code-block:: yaml
-
-   packages:
-     mpi:
-       require: 'mvapich2 %gcc'
-
-With the configuration above the only allowed ``mpi`` provider is ``mvapich2 %gcc``.
-
-Requirements on the virtual spec and on the specific provider are both applied, if
-present. For instance with a configuration like:
-
-.. code-block:: yaml
-
-   packages:
-     mpi:
-       require: 'mvapich2 %gcc'
-     mvapich2:
-       require: '~cuda'
-
-you will use ``mvapich2~cuda %gcc`` as an ``mpi`` provider.
-
-.. _package-preferences:
-
--------------------
-Package Preferences
--------------------
-
-In some cases package requirements can be too strong, and package
-preferences are the better option. Package preferences do not impose
-constraints on packages for particular versions or variants values,
-they rather only set defaults. The concretizer is free to change
-them if it must, due to other constraints, and also prefers reusing
-installed packages over building new ones that are a better match for
-preferences.
-
-.. seealso::
-
-   FAQ: :ref:`Why does Spack pick particular versions and variants? <faq-concretizer-precedence>`
-
-
-Most package preferences (``compilers``, ``target`` and ``providers``)
-can only be set globally under the ``all`` section of ``packages.yaml``:
-
-.. code-block:: yaml
-
-   packages:
-     all:
-       compiler: [gcc@12.2.0, clang@12:, oneapi@2023:]
-       target: [x86_64_v3]
-       providers:
-         mpi: [mvapich2, mpich, openmpi]
-
-These preferences override Spack's default and effectively reorder priorities
-when looking for the best compiler, target or virtual package provider. Each
-preference takes an ordered list of spec constraints, with earlier entries in
-the list being preferred over later entries.
-
-In the example above all packages prefer to be compiled with ``gcc@12.2.0``,
-to target the ``x86_64_v3`` microarchitecture and to use ``mvapich2`` if they
-depend on ``mpi``.
-
-The ``variants`` and ``version`` preferences can be set under
-package specific sections of the ``packages.yaml`` file:
-
-.. code-block:: yaml
-
-   packages:
-     opencv:
-       variants: +debug
-     gperftools:
-       version: [2.2, 2.4, 2.3]
-
-In this case, the preference for ``opencv`` is to build with debug options, while
-``gperftools`` prefers version 2.2 over 2.4.
-
-Any preference can be overwritten on the command line if explicitly requested.
-
-Preferences cannot overcome explicit constraints, as they only set a preferred
-ordering among homogeneous attribute values. Going back to the example, if
-``gperftools@2.3:`` was requested, then Spack will install version 2.4
-since the most preferred version 2.2 is prohibited by the version constraint.
-
-.. _package_permissions:
-
--------------------
-Package Permissions
--------------------
-
-Spack can be configured to assign permissions to the files installed
-by a package.
-
-In the ``packages.yaml`` file under ``permissions``, the attributes
-``read``, ``write``, and ``group`` control the package
-permissions. These attributes can be set per-package, or for all
-packages under ``all``. If permissions are set under ``all`` and for a
-specific package, the package-specific settings take precedence.
-
-The ``read`` and ``write`` attributes take one of ``user``, ``group``,
-and ``world``.
-
-.. code-block:: yaml
-
-  packages:
-    all:
-      permissions:
-        write: group
-        group: spack
-    my_app:
-      permissions:
-        read: group
-        group: my_team
-
-The permissions settings describe the broadest level of access to
-installations of the specified packages. The execute permissions of
-the file are set to the same level as read permissions for those files
-that are executable. The default setting for ``read`` is ``world``,
-and for ``write`` is ``user``. In the example above, installations of
-``my_app`` will be installed with user and group permissions but no
-world permissions, and owned by the group ``my_team``. All other
-packages will be installed with user and group write privileges, and
-world read privileges. Those packages will be owned by the group
-``spack``.
-
-The ``group`` attribute assigns a Unix-style group to a package. All
-files installed by the package will be owned by the assigned group,
-and the sticky group bit will be set on the install prefix and all
-directories inside the install prefix. This will ensure that even
-manually placed files within the install prefix are owned by the
-assigned group. If no group is assigned, Spack will allow the OS
-default behavior to go as expected.
-
-----------------------------
-Assigning Package Attributes
-----------------------------
-
-You can assign class-level attributes in the configuration:
-
-.. code-block:: yaml
-
-  packages:
-    mpileaks:
-      # Override existing attributes
-      url: http://www.somewhereelse.com/mpileaks-1.0.tar.gz
-      # ... or add new ones
-      x: 1
-
-Attributes set this way will be accessible to any method executed
-in the package.py file (e.g. the ``install()`` method). Values for these
-attributes may be any value parseable by yaml.
-
-These can only be applied to specific packages, not "all" or
-virtual packages.

lib/spack/docs/packaging_guide.rst

@@ -121,7 +121,7 @@ Since v0.19, Spack supports  two ways of writing a package recipe. The most comm
 
        def url_for_version(self, version):
            if version >= Version("2.1.1"):
-               return super().url_for_version(version)
+               return super(Openjpeg, self).url_for_version(version)
            url_fmt = "https://github.com/uclouvain/openjpeg/archive/version.{0}.tar.gz"
            return url_fmt.format(version)
 
@@ -155,7 +155,7 @@ builder class explicitly. Using the same example as above, this reads:
 
        def url_for_version(self, version):
            if version >= Version("2.1.1"):
-               return super().url_for_version(version)
+               return super(Openjpeg, self).url_for_version(version)
            url_fmt = "https://github.com/uclouvain/openjpeg/archive/version.{0}.tar.gz"
            return url_fmt.format(version)
 
@@ -363,42 +363,6 @@ one of these::
 If Spack finds none of these variables set, it will look for ``vim``, ``vi``, ``emacs``,
 ``nano``, and ``notepad``, in that order.
 
-^^^^^^^^^^^^^^^^^
-Bundling software
-^^^^^^^^^^^^^^^^^
-
-If you have a collection of software expected to work well together with
-no source code of its own, you can create a :ref:`BundlePackage <bundlepackage>`.
-Examples where bundle packages can be useful include defining suites of
-applications (e.g, `EcpProxyApps
-<https://github.com/spack/spack/blob/develop/var/spack/repos/builtin/packages/ecp-proxy-apps/package.py>`_), commonly used libraries
-(e.g., `AmdAocl <https://github.com/spack/spack/blob/develop/var/spack/repos/builtin/packages/amd-aocl/package.py>`_),
-and software development kits (e.g., `EcpDataVisSdk <https://github.com/spack/spack/blob/develop/var/spack/repos/builtin/packages/ecp-data-vis-sdk/package.py>`_).
-
-These versioned packages primarily consist of dependencies on the associated
-software packages. They can include :ref:`variants <variants>` to ensure
-common build options are consistently applied to dependencies. Known build
-failures, such as not building on a platform or when certain compilers or
-variants are used, can be flagged with :ref:`conflicts <packaging_conflicts>`.
-Build requirements, such as only building with specific compilers, can similarly
-be flagged with :ref:`requires <packaging_conflicts>`.
-
-The ``spack create --template bundle`` command will create a skeleton
-``BundlePackage`` ``package.py`` for you:
-
-.. code-block:: console
-
-   $ spack create --template bundle --name coolsdk
-
-Now you can fill in the basic package documentation, version(s), and software
-package dependencies along with any other relevant customizations.
-
-.. note::
-
-   Remember that bundle packages have no software of their own so there
-   is nothing to download.
-
-
 ^^^^^^^^^^^^^^^^^^^^^^^^^
 Non-downloadable software
 ^^^^^^^^^^^^^^^^^^^^^^^^^
@@ -646,16 +610,7 @@ add a line like this in the package class:
        version("8.2.0", md5="1c9f62f0778697a09d36121ead88e08e")
        version("8.1.2", md5="d47dd09ed7ae6e7fd6f9a816d7f5fdf6")
 
-.. note::
+Versions should be listed in descending order, from newest to oldest.
-
-   By convention, we list versions in descending order, from newest to oldest.
-
-.. note::
-
-   :ref:`Bundle packages  <bundlepackage>` do not have source code so
-   there is nothing to fetch. Consequently, their version directives
-   consist solely of the version name (e.g., ``version("202309")``).
-
 
 ^^^^^^^^^^^^^
 Date Versions
@@ -1549,7 +1504,7 @@ its value:
 
     def configure_args(self):
         ...
-        if self.spec.satisfies("+shared"):
+        if "+shared" in self.spec:
             extra_args.append("--enable-shared")
         else:
             extra_args.append("--disable-shared")
@@ -1636,7 +1591,7 @@ Within a package recipe a multi-valued variant is tested using a ``key=value`` s
 
   .. code-block:: python
 
-    if spec.satisfies("languages=jit"):
+    if "languages=jit" in spec:
         options.append("--enable-host-shared")
 
 """""""""""""""""""""""""""""""""""""""""""
@@ -2288,7 +2243,7 @@ looks like this:
        url      = "http://www.openssl.org/source/openssl-1.0.1h.tar.gz"
 
        version("1.0.1h", md5="8d6d684a9430d5cc98a62a5d8fbda8cf")
-       depends_on("zlib-api")
+       depends_on("zlib")
 
        parallel = False
 
@@ -2337,7 +2292,7 @@ window while a batch job is running ``spack install`` on the same or
 overlapping dependencies without any process trying to re-do the work of
 another.
 
-For example, if you are using Slurm, you could launch an installation
+For example, if you are using SLURM, you could launch an installation
 of ``mpich`` using the following command:
 
 .. code-block:: console
@@ -2352,7 +2307,7 @@ the following at the command line of a bash shell:
 
 .. code-block:: console
 
-   $ for i in {1..12}; do nohup spack install -j 4 mpich@3.3.2 >> mpich_install.txt 2>&1 & done
+   $ for i in {1..12}; do nohup spack install -j 4 mpich@3.3.2 >> mpich_install.txt 2>&1 &; done
 
 .. note::
 
@@ -2557,10 +2512,9 @@ Conditional dependencies
 ^^^^^^^^^^^^^^^^^^^^^^^^
 
 You may have a package that only requires a dependency under certain
-conditions. For example, you may have a package with optional MPI support.
+conditions. For example, you may have a package that has optional MPI support,
-You would then provide a variant to reflect that the feature is optional
+- MPI is only a dependency when you want to enable MPI support for the
-and specify the MPI dependency only applies when MPI support is enabled.
+package. In that case, you could say something like:
-In that case, you could say something like:
 
 .. code-block:: python
 
@@ -2568,39 +2522,13 @@ In that case, you could say something like:
 
    depends_on("mpi", when="+mpi")
 
+``when`` can include constraints on the variant, version, compiler, etc. and
+the :mod:`syntax<spack.spec>` is the same as for Specs written on the command
+line.
 
-Suppose the above package also has, since version 3, optional `Trilinos`
+If a dependency/feature of a package isn't typically used, you can save time
-support and you want them both to build either with or without MPI. Further
+by making it conditional (since Spack will not build the dependency unless it
-suppose you require a version of `Trilinos` no older than 12.6. In that case,
+is required for the Spec).
-the `trilinos` variant and dependency directives would be:
-
-.. code-block:: python
-
-   variant("trilinos", default=False, description="Enable Trilinos support")
-
-   depends_on("trilinos@12.6:", when="@3: +trilinos")
-   depends_on("trilinos@12.6: +mpi", when="@3: +trilinos +mpi")
-
-
-Alternatively, you could use the `when` context manager to equivalently specify
-the `trilinos` variant dependencies as follows:
-
-.. code-block:: python
-
-   with when("@3: +trilinos"):
-       depends_on("trilinos@12.6:")
-       depends_on("trilinos +mpi", when="+mpi")
-
-
-The argument to ``when`` in either case can include any Spec constraints that
-are supported on the command line using the same :ref:`syntax <sec-specs>`.
-
-.. note::
-
-   If a dependency isn't typically used, you can save time by making it
-   conditional since Spack will not build the dependency unless it is
-   required for the Spec.
-
 
 .. _dependency_dependency_patching:
 
@@ -2688,6 +2616,60 @@ appear in the package file (or in this case, in the list).
    right version. If two packages depend on ``binutils`` patched *the
    same* way, they can both use a single installation of ``binutils``.
 
+.. _setup-dependent-environment:
+
+^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
+Influence how dependents are built or run
+^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
+
+Spack provides a mechanism for dependencies to influence the
+environment of their dependents by overriding  the
+:meth:`setup_dependent_run_environment <spack.package_base.PackageBase.setup_dependent_run_environment>`
+or the
+:meth:`setup_dependent_build_environment <spack.builder.Builder.setup_dependent_build_environment>`
+methods.
+The Qt package, for instance, uses this call:
+
+.. literalinclude:: _spack_root/var/spack/repos/builtin/packages/qt/package.py
+   :pyobject: Qt.setup_dependent_build_environment
+   :linenos:
+
+to set the ``QTDIR`` environment variable so that packages
+that depend on a particular Qt installation will find it.
+Another good example of how a dependency can influence
+the build environment of dependents is the Python package:
+
+.. literalinclude:: _spack_root/var/spack/repos/builtin/packages/python/package.py
+   :pyobject: Python.setup_dependent_build_environment
+   :linenos:
+
+In the method above it is ensured that any package that depends on Python
+will have the ``PYTHONPATH``, ``PYTHONHOME`` and ``PATH`` environment
+variables set appropriately before starting the installation. To make things
+even simpler the ``python setup.py`` command is also inserted into the module
+scope of dependents by overriding a third method called
+:meth:`setup_dependent_package <spack.package_base.PackageBase.setup_dependent_package>`
+:
+
+.. literalinclude:: _spack_root/var/spack/repos/builtin/packages/python/package.py
+   :pyobject: Python.setup_dependent_package
+   :linenos:
+
+This allows most python packages to have a very simple install procedure,
+like the following:
+
+.. code-block:: python
+
+   def install(self, spec, prefix):
+       setup_py("install", "--prefix={0}".format(prefix))
+
+Finally the Python package takes also care of the modifications to ``PYTHONPATH``
+to allow dependencies to run correctly:
+
+.. literalinclude:: _spack_root/var/spack/repos/builtin/packages/python/package.py
+    :pyobject: Python.setup_dependent_run_environment
+    :linenos:
+
 
 .. _packaging_conflicts:
 
@@ -2696,7 +2678,7 @@ Conflicts and requirements
 --------------------------
 
 Sometimes packages have known bugs, or limitations, that would prevent them
-from building e.g. against other dependencies or with certain compilers. Spack
+to build e.g. against other dependencies or with certain compilers. Spack
 makes it possible to express such constraints with the ``conflicts`` directive.
 
 Adding the following to a package:
@@ -2832,70 +2814,6 @@ variant(s) are selected.  This may be accomplished with conditional
        extends("python", when="+python")
        ...
 
-.. _setup-environment:
-
---------------------------------------------
-Runtime and build time environment variables
---------------------------------------------
-
-Spack provides a few methods to help package authors set up the required environment variables for
-their package. Environment variables typically depend on how the package is used: variables that
-make sense during the build phase may not be needed at runtime, and vice versa. Further, sometimes
-it makes sense to let a dependency set the environment variables for its dependents. To allow all
-this, Spack provides four different methods that can be overridden in a package:
-
-1. :meth:`setup_build_environment <spack.builder.Builder.setup_build_environment>`
-2. :meth:`setup_run_environment <spack.package_base.PackageBase.setup_run_environment>`
-3. :meth:`setup_dependent_build_environment <spack.builder.Builder.setup_dependent_build_environment>`
-4. :meth:`setup_dependent_run_environment <spack.package_base.PackageBase.setup_dependent_run_environment>`
-
-The Qt package, for instance, uses this call:
-
-.. literalinclude:: _spack_root/var/spack/repos/builtin/packages/qt/package.py
-   :pyobject: Qt.setup_dependent_build_environment
-   :linenos:
-
-to set the ``QTDIR`` environment variable so that packages that depend on a particular Qt
-installation will find it.
-
-The following diagram will give you an idea when each of these methods is called in a build
-context:
-
-.. image:: images/setup_env.png
-   :align: center
-
-Notice that ``setup_dependent_run_environment`` can be called multiple times, once for each
-dependent package, whereas ``setup_run_environment`` is called only once for the package itself.
-This means that the former should only be used if the environment variables depend on the dependent
-package, whereas the latter should be used if the environment variables depend only on the package
-itself.
-
---------------------------------
-Setting package module variables
---------------------------------
-
-Apart from modifying environment variables of the dependent package, you can also define Python
-variables to be used by the dependent. This is done by implementing
-:meth:`setup_dependent_package <spack.package_base.PackageBase.setup_dependent_package>`. An
-example of this can be found in the ``Python`` package:
-
-.. literalinclude:: _spack_root/var/spack/repos/builtin/packages/python/package.py
-   :pyobject: Python.setup_dependent_package
-   :linenos:
-
-This allows Python packages to directly use these variables:
-
-.. code-block:: python
-
-   def install(self, spec, prefix):
-       ...
-       install("script.py", python_platlib)
-
-.. note::
-
-   We recommend using ``setup_dependent_package`` sparingly, as it is not always clear where
-   global variables are coming from when editing a ``package.py`` file.
-
 -----
 Views
 -----
@@ -2974,33 +2892,6 @@ The ``provides("mpi")`` call tells Spack that the ``mpich`` package
 can be used to satisfy the dependency of any package that
 ``depends_on("mpi")``.
 
-^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
-Providing multiple virtuals simultaneously
-^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
-
-Packages can provide more than one virtual dependency. Sometimes, due to implementation details,
-there are subsets of those virtuals that need to be provided together by the same package.
-
-A well-known example is ``openblas``, which provides both the ``lapack`` and ``blas`` API in a single ``libopenblas``
-library. A package that needs ``lapack`` and ``blas`` must either use ``openblas`` to provide both, or not use
-``openblas`` at all. It cannot pick one or the other.
-
-To express this constraint in a package, the two virtual dependencies must be listed in the same ``provides`` directive:
-
-.. code-block:: python
-
-   provides('blas', 'lapack')
-
-This makes it impossible to select ``openblas`` as a provider for one of the two
-virtual dependencies and not for the other. If you try to, Spack will report an error:
-
-.. code-block:: console
-
-   $ spack spec netlib-scalapack  ^[virtuals=lapack] openblas ^[virtuals=blas] atlas
-   ==> Error: concretization failed for the following reasons:
-
-      1. Package 'openblas' needs to provide both 'lapack' and 'blas' together, but provides only 'lapack'
-
 ^^^^^^^^^^^^^^^^^^^^
 Versioned Interfaces
 ^^^^^^^^^^^^^^^^^^^^
@@ -3180,7 +3071,7 @@ follows:
        # The library provided by the bar virtual package
        @property
        def bar_libs(self):
-           return find_libraries("libFooBar", root=self.home, recursive=True)
+           return find_libraries("libFooBar", root=sef.home, recursive=True)
 
        # The baz virtual package home
        @property
@@ -3503,56 +3394,6 @@ is equivalent to:
 Constraints from nested context managers are also combined together, but they are rarely
 needed or recommended.
 
-.. _default_args:
-
-------------------------
-Common default arguments
-------------------------
-
-Similarly, if directives have a common set of default arguments, you can
-group them together in a ``with default_args()`` block:
-
-.. code-block:: python
-
-   class PyExample(PythonPackage):
-
-       with default_args(type=("build", "run")):
-           depends_on("py-foo")
-           depends_on("py-foo@2:", when="@2:")
-           depends_on("py-bar")
-           depends_on("py-bz")
-
-The above is short for:
-
-.. code-block:: python
-
-   class PyExample(PythonPackage):
-
-       depends_on("py-foo", type=("build", "run"))
-       depends_on("py-foo@2:", when="@2:", type=("build", "run"))
-       depends_on("py-bar", type=("build", "run"))
-       depends_on("py-bz", type=("build", "run"))
-
-.. note::
-
-   The ``with when()`` context manager is composable, while ``with default_args()``
-   merely overrides the default. For example:
-
-   .. code-block:: python
-
-      with default_args(when="+feature"):
-          depends_on("foo")
-          depends_on("bar")
-          depends_on("baz", when="+baz")
-
-   is equivalent to:
-
-   .. code-block:: python
-
-      depends_on("foo", when="+feature")
-      depends_on("bar", when="+feature")
-      depends_on("baz", when="+baz")  # Note: not when="+feature+baz"
-
 .. _install-method:
 
 ------------------
@@ -3615,7 +3456,7 @@ need to override methods like ``configure_args``:
 
    def configure_args(self):
         args = ["--enable-cxx"] + self.enable_or_disable("libs")
-        if self.spec.satisfies("libs=static"):
+        if "libs=static" in self.spec:
             args.append("--with-pic")
         return args
 
@@ -3749,8 +3590,7 @@ regardless of the build system. The arguments for the phase are:
 The arguments ``spec`` and ``prefix`` are passed only for convenience, as they always
 correspond to ``self.spec`` and ``self.spec.prefix`` respectively.
 
-If the ``package.py`` has build instructions in a separate
+If the ``package.py`` encodes builders explicitly, the signature for a phase changes slightly:
-:ref:`builder class <multiple_build_systems>`, the signature for a phase changes slightly:
 
 .. code-block:: python
 
@@ -3760,6 +3600,56 @@ If the ``package.py`` has build instructions in a separate
 
 In this case the package is passed as the second argument, and ``self`` is the builder instance.
 
+.. _multiple_build_systems:
+
+^^^^^^^^^^^^^^^^^^^^^^
+Multiple build systems
+^^^^^^^^^^^^^^^^^^^^^^
+
+There are cases where a software actively supports two build systems, or changes build systems
+as it evolves, or needs different build systems on different platforms. Spack allows dealing with
+these cases natively, if a recipe is written using builders explicitly.
+
+For instance, software that supports two build systems unconditionally should derive from
+both ``*Package`` base classes, and declare the possible use of multiple build systems using
+a directive:
+
+.. code-block:: python
+
+   class ArpackNg(CMakePackage, AutotoolsPackage):
+
+       build_system("cmake", "autotools", default="cmake")
+
+In this case the software can be built with both ``autotools`` and ``cmake``. Since the package
+supports multiple build systems, it is necessary to declare which one is the default. The ``package.py``
+will likely contain some overriding of default builder methods:
+
+.. code-block:: python
+
+   class CMakeBuilder(spack.build_systems.cmake.CMakeBuilder):
+       def cmake_args(self):
+           pass
+
+   class AutotoolsBuilder(spack.build_systems.autotools.AutotoolsBuilder):
+       def configure_args(self):
+           pass
+
+In more complex cases it might happen that the build system changes according to certain conditions,
+for instance across versions. That can be expressed with conditional variant values:
+
+.. code-block:: python
+
+   class ArpackNg(CMakePackage, AutotoolsPackage):
+
+       build_system(
+           conditional("cmake", when="@0.64:"),
+           conditional("autotools", when="@:0.63"),
+           default="cmake",
+       )
+
+In the example the directive impose a change from ``Autotools`` to ``CMake`` going
+from ``v0.63`` to ``v0.64``.
+
 ^^^^^^^^^^^^^^^^^^
 Mixin base classes
 ^^^^^^^^^^^^^^^^^^
@@ -3806,106 +3696,6 @@ for instance:
 
 In the example above ``Cp2k`` inherits all the conflicts and variants that ``CudaPackage`` defines.
 
-.. _multiple_build_systems:
-
-----------------------
-Multiple build systems
-----------------------
-
-There are cases where a package actively supports two build systems, or changes build systems
-as it evolves, or needs different build systems on different platforms. Spack allows dealing with
-these cases by splitting the build instructions into separate builder classes.
-
-For instance, software that supports two build systems unconditionally should derive from
-both ``*Package`` base classes, and declare the possible use of multiple build systems using
-a directive:
-
-.. code-block:: python
-
-   class Example(CMakePackage, AutotoolsPackage):
-
-       variant("my_feature", default=True)
-
-       build_system("cmake", "autotools", default="cmake")
-
-In this case the software can be built with both ``autotools`` and ``cmake``. Since the package
-supports multiple build systems, it is necessary to declare which one is the default.
-
-Additional build instructions are split into separate builder classes:
-
-.. code-block:: python
-
-   class CMakeBuilder(spack.build_systems.cmake.CMakeBuilder):
-       def cmake_args(self):
-           return [
-               self.define_from_variant("MY_FEATURE", "my_feature")
-           ]
-
-   class AutotoolsBuilder(spack.build_systems.autotools.AutotoolsBuilder):
-       def configure_args(self):
-           return self.with_or_without("my-feature", variant="my_feature")
-
-In this example, ``spack install example +feature build_sytem=cmake``  will
-pick the ``CMakeBuilder`` and invoke ``cmake -DMY_FEATURE:BOOL=ON``.
-
-Similarly, ``spack install example +feature build_system=autotools`` will pick
-the  ``AutotoolsBuilder`` and invoke ``./configure --with-my-feature``.
-
-Dependencies are always specified in the package class. When some dependencies
-depend on the choice of the build system, it is possible to use when conditions as
-usual:
-
-.. code-block:: python
-
-   class Example(CMakePackage, AutotoolsPackage):
-
-       build_system("cmake", "autotools", default="cmake")
-
-       # Runtime dependencies
-       depends_on("ncurses")
-       depends_on("libxml2")
-
-       # Lowerbounds for cmake only apply when using cmake as the build system
-       with when("build_system=cmake"):
-           depends_on("cmake@3.18:", when="@2.0:", type="build")
-           depends_on("cmake@3:", type="build")
-
-       # Specify extra build dependencies used only in the configure script
-       with when("build_system=autotools"):
-           depends_on("perl", type="build")
-           depends_on("pkgconfig", type="build")
-
-Very often projects switch from one build system to another, or add support
-for a new build system from a certain version, which means that the choice
-of the build system typically depends on a version range. Those situations can
-be handled by using conditional values in the ``build_system`` directive:
-
-.. code-block:: python
-
-   class Example(CMakePackage, AutotoolsPackage):
-
-       build_system(
-           conditional("cmake", when="@0.64:"),
-           conditional("autotools", when="@:0.63"),
-           default="cmake",
-       )
-
-In the example the directive impose a change from ``Autotools`` to ``CMake`` going
-from ``v0.63`` to ``v0.64``.
-
-The ``build_system`` can be used as an ordinary variant, which also means that it can
-be used in ``depends_on`` statements. This can be useful when a package *requires* that
-its dependency has a CMake config file, meaning that the dependent can only build when the
-dependency is built with CMake, and not Autotools. In that case, you can force the choice
-of the build system in the dependent:
-
-.. code-block:: python
-
-   class Dependent(CMakePackage):
-
-       depends_on("example build_system=cmake")
-
-
 .. _install-environment:
 
 -----------------------
@@ -4478,7 +4268,7 @@ for supported features, for instance:
 
 .. code-block:: python
 
-   if spec.satisfies("target=avx512"):
+   if "avx512" in spec.target:
        args.append("--with-avx512")
 
 The snippet above will append the ``--with-avx512`` item to a list of arguments only if the corresponding
@@ -4983,17 +4773,17 @@ For example, running:
 
 results in spack checking that the installation created the following **file**:
 
-* ``self.prefix.bin.reframe``
+* ``self.prefix/bin/reframe``
 
 and the following **directories**:
 
-* ``self.prefix.bin``
+* ``self.prefix/bin``
-* ``self.prefix.config``
+* ``self.prefix/config``
-* ``self.prefix.docs``
+* ``self.prefix/docs``
-* ``self.prefix.reframe``
+* ``self.prefix/reframe``
-* ``self.prefix.tutorials``
+* ``self.prefix/tutorials``
-* ``self.prefix.unittests``
+* ``self.prefix/unittests``
-* ``self.prefix.cscs-checks``
+* ``self.prefix/cscs-checks``
 
 If **any** of these paths are missing, then Spack considers the installation
 to have failed.
@@ -5137,7 +4927,7 @@ installed executable. The check is implemented as follows:
        @on_package_attributes(run_tests=True)
        def check_list(self):
             with working_dir(self.stage.source_path):
-                reframe = Executable(self.prefix.bin.reframe)
+                reframe = Executable(join_path(self.prefix, "bin", "reframe"))
                 reframe("-l")
 
 .. warning::
@@ -5357,8 +5147,8 @@ embedded test parts.
            for example in ["ex1", "ex2"]:
                with test_part(
                    self,
-                   f"test_example_{example}",
+                   "test_example_{0}".format(example),
-                   purpose=f"run installed {example}",
+                   purpose="run installed {0}".format(example),
                 ):
                     exe = which(join_path(self.prefix.bin, example))
                     exe()
@@ -5436,10 +5226,11 @@ Below illustrates using this feature to compile an example.
            ...
            cxx = which(os.environ["CXX"])
            cxx(
-               f"-L{self.prefix.lib}",
+               "-L{0}".format(self.prefix.lib),
-               f"-I{self.prefix.include}",
+               "-I{0}".format(self.prefix.include),
-               f"{exe}.cpp",
+               "{0}.cpp".format(exe),
-               "-o", exe
+               "-o",
+               exe
            )
            cxx_example = which(exe)
            cxx_example()
@@ -5456,14 +5247,14 @@ Saving build-time files
     We highly recommend re-using build-time test sources and pared down
     input files for testing installed software. These files are easier
     to keep synchronized with software capabilities since they reside
-    within the software's repository.
+    within the software's repository. 
-
+    
     If that is not possible, you can add test-related files to the package
     repository (see :ref:`adding custom files <cache_custom_files>`). It
     will be important to maintain them so they work across listed or supported
     versions of the package.
 
-You can use the ``cache_extra_test_sources`` helper to copy directories
+You can use the ``cache_extra_test_sources`` method to copy directories
 and or files from the source build stage directory to the package's
 installation directory.
 
@@ -5471,15 +5262,10 @@ The signature for ``cache_extra_test_sources`` is:
 
 .. code-block:: python
 
-   def cache_extra_test_sources(pkg, srcs):
+   def cache_extra_test_sources(self, srcs):
-
-where each argument has the following meaning:
-
-* ``pkg`` is an instance of the package for the spec under test.
-
-* ``srcs`` is a string *or* a list of strings corresponding to the
-  paths of subdirectories and or files needed for stand-alone testing.
 
+where ``srcs`` is a string *or* a list of strings corresponding to the
+paths of subdirectories and or files needed for stand-alone testing. 
 The paths must be relative to the staged source directory. Contents of
 subdirectories and files are copied to a special test cache subdirectory
 of the installation prefix. They are automatically copied to the appropriate
@@ -5500,18 +5286,21 @@ and using ``foo.c`` in a test method is illustrated below.
            srcs = ["tests",
                    join_path("examples", "foo.c"),
                    join_path("examples", "bar.c")]
-           cache_extra_test_sources(self, srcs)
+           self.cache_extra_test_sources(srcs)
 
        def test_foo(self):
            exe = "foo"
-           src_dir = self.test_suite.current_test_cache_dir.examples
+           src_dir = join_path(
+               self.test_suite.current_test_cache_dir, "examples"
+           )
            with working_dir(src_dir):
                cc = which(os.environ["CC"])
                cc(
-                   f"-L{self.prefix.lib}",
+                   "-L{0}".format(self.prefix.lib),
-                   f"-I{self.prefix.include}",
+                   "-I{0}".format(self.prefix.include),
-                   f"{exe}.c",
+                   "{0}.c".format(exe),
-                   "-o", exe
+                   "-o",
+                   exe
                )
                foo = which(exe)
                foo()
@@ -5537,9 +5326,9 @@ the files using the ``self.test_suite.current_test_cache_dir`` property.
 In our example above, test methods can use the following paths to reference
 the copy of each entry listed in ``srcs``, respectively:
 
-* ``self.test_suite.current_test_cache_dir.tests``
+* ``join_path(self.test_suite.current_test_cache_dir, "tests")``
-* ``join_path(self.test_suite.current_test_cache_dir.examples, "foo.c")``
+* ``join_path(self.test_suite.current_test_cache_dir, "examples", "foo.c")``
-* ``join_path(self.test_suite.current_test_cache_dir.examples, "bar.c")``
+* ``join_path(self.test_suite.current_test_cache_dir, "examples", "bar.c")``
 
 .. admonition:: Library packages should build stand-alone tests
 
@@ -5558,7 +5347,7 @@ the copy of each entry listed in ``srcs``, respectively:
     If one or more of the copied files needs to be modified to reference
     the installed software, it is recommended that those changes be made
     to the cached files **once** in the ``copy_test_sources`` method and
-    ***after** the call to ``cache_extra_test_sources()``. This will
+    ***after** the call to ``self.cache_extra_test_sources()``. This will
     reduce the amount of unnecessary work in the test method **and** avoid
     problems testing in shared instances and facility deployments.
 
@@ -5605,7 +5394,7 @@ property as shown below.
            """build and run custom-example"""
            data_dir = self.test_suite.current_test_data_dir
            exe = "custom-example"
-           src = datadir.join(f"{exe}.cpp")
+           src = datadir.join("{0}.cpp".format(exe))
            ...
            # TODO: Build custom-example using src and exe
            ...
@@ -5621,7 +5410,7 @@ Reading expected output from a file
 
 The helper function ``get_escaped_text_output`` is available for packages
 to retrieve and properly format the text from a file that contains the
-expected output from running an executable that may contain special
+expected output from running an executable that may contain special 
 characters.
 
 The signature for ``get_escaped_text_output`` is:
@@ -5655,7 +5444,7 @@ added to the package's ``test`` subdirectory.
                db_filename, ".dump", output=str.split, error=str.split
            )
            for exp in expected:
-               assert re.search(exp, out), f"Expected '{exp}' in output"
+               assert re.search(exp, out), "Expected '{0}' in output".format(exp)
 
 If the file was instead copied from the ``tests`` subdirectory of the staged
 source code, the path would be obtained as shown below.
@@ -5668,7 +5457,7 @@ source code, the path would be obtained as shown below.
            db_filename = test_cache_dir.join("packages.db")
 
 Alternatively, if the file was copied to the ``share/tests`` subdirectory
-as part of the installation process, the test could access the path as
+as part of the installation process, the test could access the path as 
 follows:
 
 .. code-block:: python
@@ -5705,12 +5494,9 @@ Invoking the method is the equivalent of:
 
 .. code-block:: python
 
-   errors = []
    for check in expected:
        if not re.search(check, actual):
-           errors.append(f"Expected '{check}' in output '{actual}'")
+           raise RuntimeError("Expected '{0}' in output '{1}'".format(check, actual))
-   if errors:
-       raise RuntimeError("\n ".join(errors))
 
 
 .. _accessing-files:
@@ -5750,7 +5536,7 @@ repository, and installation.
      - ``self.test_suite.test_dir_for_spec(self.spec)``
    * - Current Spec's Build-time Files
      - ``self.test_suite.current_test_cache_dir``
-     - ``join_path(self.test_suite.current_test_cache_dir.examples, "foo.c")``
+     - ``join_path(self.test_suite.current_test_cache_dir, "examples", "foo.c")``
    * - Current Spec's Custom Test Files
      - ``self.test_suite.current_test_data_dir``
      - ``join_path(self.test_suite.current_test_data_dir, "hello.f90")``
@@ -5765,7 +5551,7 @@ Inheriting stand-alone tests
 Stand-alone tests defined in parent (.e.g., :ref:`build-systems`) and
 virtual (e.g., :ref:`virtual-dependencies`) packages are executed by
 packages that inherit from or provide interface implementations for those
-packages, respectively.
+packages, respectively. 
 
 The table below summarizes the stand-alone tests that will be executed along
 with those implemented in the package itself.
@@ -5835,7 +5621,7 @@ for ``openmpi``:
    SKIPPED: test_version_oshcc: oshcc is not installed
    ...
    ==> [2023-03-10-16:04:02.215227] Completed testing
-   ==> [2023-03-10-16:04:02.215597]
+   ==> [2023-03-10-16:04:02.215597] 
    ======================== SUMMARY: openmpi-4.1.4-ubmrigj ========================
    Openmpi::test_bin_mpirun .. PASSED
    Openmpi::test_bin_ompi_info .. PASSED
@@ -6285,7 +6071,7 @@ in the extra attributes can implement this method like this:
    @classmethod
    def validate_detected_spec(cls, spec, extra_attributes):
        """Check that "compilers" is in the extra attributes."""
-       msg = ("the extra attribute 'compilers' must be set for "
+       msg = ("the extra attribute "compilers" must be set for "
               "the detected spec '{0}'".format(spec))
        assert "compilers" in extra_attributes, msg
 
@@ -6361,100 +6147,7 @@ follows:
                "foo-package@{0}".format(version_str)
            )
 
-^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
+.. _package-lifecycle:
-Add detection tests to packages
-^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
-
-To ensure that software is detected correctly for multiple configurations
-and on different systems users can write a ``detection_test.yaml`` file and
-put it in the package directory alongside the ``package.py`` file.
-This YAML file contains enough information for Spack to mock an environment
-and try to check if the detection logic yields the results that are expected.
-
-As a general rule, attributes at the top-level of ``detection_test.yaml``
-represent search mechanisms and they each map to a list of tests that should confirm
-the validity of the package's detection logic.
-
-The detection tests can be run with the following command:
-
-.. code-block:: console
-
-   $ spack audit externals
-
-Errors that have been detected are reported to screen.
-
-""""""""""""""""""""""""""
-Tests for PATH inspections
-""""""""""""""""""""""""""
-
-Detection tests insisting on ``PATH`` inspections are listed under
-the ``paths`` attribute:
-
-.. code-block:: yaml
-
-   paths:
-   - layout:
-     - executables:
-       - "bin/clang-3.9"
-       - "bin/clang++-3.9"
-       script: |
-         echo "clang version 3.9.1-19ubuntu1 (tags/RELEASE_391/rc2)"
-         echo "Target: x86_64-pc-linux-gnu"
-         echo "Thread model: posix"
-         echo "InstalledDir: /usr/bin"
-     results:
-     - spec: 'llvm@3.9.1 +clang~lld~lldb'
-
-Each test is performed by first creating a temporary directory structure as
-specified in the corresponding ``layout`` and by then running
-package detection and checking that the outcome matches the expected
-``results``. The exact details on how to specify both the ``layout`` and the
-``results`` are reported in the table below:
-
-.. list-table:: Test based on PATH inspections
-   :header-rows: 1
-
-   * - Option Name
-     - Description
-     - Allowed Values
-     - Required Field
-   * - ``layout``
-     - Specifies the filesystem tree used for the test
-     - List of objects
-     - Yes
-   * - ``layout:[0]:executables``
-     - Relative paths for the mock executables to be created
-     - List of strings
-     - Yes
-   * - ``layout:[0]:script``
-     - Mock logic for the executable
-     - Any valid shell script
-     - Yes
-   * - ``results``
-     - List of expected results
-     - List of objects (empty if no result is expected)
-     - Yes
-   * - ``results:[0]:spec``
-     - A spec that is expected from detection
-     - Any valid spec
-     - Yes
-
-"""""""""""""""""""""""""""""""
-Reuse tests from other packages
-"""""""""""""""""""""""""""""""
-
-When using a custom repository, it is possible to customize a package that already exists in ``builtin``
-and reuse its external tests. To do so, just write a ``detection_tests.yaml`` alongside the customized
-``package.py`` with an ``includes`` attribute. For instance the ``detection_tests.yaml`` for
-``myrepo.llvm`` might look like:
-
-.. code-block:: yaml
-
-   includes:
-   - "builtin.llvm"
-
-This YAML file instructs Spack to run the detection tests defined in ``builtin.llvm`` in addition to
-those locally defined in the file.
 
 -----------------------------
 Style guidelines for packages
@@ -6913,63 +6606,3 @@ To achieve backward compatibility with the single-class format Spack creates in
 Overall the role of the adapter is to route access to attributes of methods first through the ``*Package``
 hierarchy, and then back to the base class builder. This is schematically shown in the diagram above, where
 the adapter role is to "emulate" a method resolution order like the one represented by the red arrows.
-
-------------------------------
-Specifying License Information
-------------------------------
-
-Most of the software in Spack is open source, and most open source software is released
-under one or more `common open source licenses <https://opensource.org/licenses/>`_.
-Specifying the license that a package is released under in a project's
-`package.py` is good practice. To specify a license, find the `SPDX identifier
-<https://spdx.org/licenses/>`_ for a project and then add it using the license
-directive:
-
-.. code-block:: python
-
-   license("<SPDX Identifier HERE>")
-
-For example, the SPDX ID for the Apache Software License, version 2.0 is ``Apache-2.0``,
-so you'd write:
-
-.. code-block:: python
-
-   license("Apache-2.0")
-
-Or, for a dual-licensed package like Spack, you would use an `SPDX Expression
-<https://spdx.github.io/spdx-spec/v2-draft/SPDX-license-expressions/>`_ with both of its
-licenses:
-
-.. code-block:: python
-
-   license("Apache-2.0 OR MIT")
-
-Note that specifying a license without a when clause makes it apply to all
-versions and variants of the package, which might not actually be the case.
-For example, a project might have switched licenses at some point or have
-certain build configurations that include files that are licensed differently.
-Spack itself used to be under the ``LGPL-2.1`` license, until it was relicensed
-in version ``0.12`` in 2018.
-
-You can specify when a ``license()`` directive applies using with a ``when=``
-clause, just like other directives. For example, to specify that a specific
-license identifier should only apply to versions up to ``0.11``, but another
-license should apply for later versions, you could write:
-
-.. code-block:: python
-
-   license("LGPL-2.1", when="@:0.11")
-   license("Apache-2.0 OR MIT", when="@0.12:")
-
-Note that unlike for most other directives, the ``when=`` constraints in the
-``license()`` directive can't intersect. Spack needs to be able to resolve
-exactly one license identifier expression for any given version. To specify
-*multiple* licenses, use SPDX expressions and operators as above. The operators
-you probably care most about are:
-
-* ``OR``: user chooses one license to adhere to; and
-* ``AND``: user has to adhere to all the licenses.
-
-You may also care about `license exceptions
-<https://spdx.org/licenses/exceptions-index.html>`_ that use the ``WITH`` operator,
-e.g. ``Apache-2.0 WITH LLVM-exception``.

lib/spack/docs/pipelines.rst

@@ -213,16 +213,6 @@ pipeline jobs.
 ``spack ci generate``
 ^^^^^^^^^^^^^^^^^^^^^
 
-Throughout this documentation, references to the "mirror" mean the target
-mirror which is checked for the presence of up-to-date specs, and where
-any scheduled jobs should push built binary packages.  In the past, this
-defaulted to the mirror at index 0 in the mirror configs, and could be
-overridden using the ``--buildcache-destination`` argument. Starting with
-Spack 0.23, ``spack ci generate`` will require you to identify this mirror
-by the name "buildcache-destination".  While you can configure any number
-of mirrors as sources for your pipelines, you will need to identify the
-destination mirror by name.
-
 Concretizes the specs in the active environment, stages them (as described in
 :ref:`staging_algorithm`), and writes the resulting ``.gitlab-ci.yml`` to disk.
 During concretization of the environment, ``spack ci generate`` also writes a

lib/spack/docs/replace_conda_homebrew.rst

@@ -4,7 +4,7 @@
    SPDX-License-Identifier: (Apache-2.0 OR MIT)
 
 =====================================
-Spack for Homebrew/Conda Users
+Using Spack to Replace Homebrew/Conda
 =====================================
 
 Spack is an incredibly powerful package manager, designed for supercomputers
@@ -191,18 +191,18 @@ The ``--fresh`` flag tells Spack to use the latest version of every package
 where possible instead of trying to optimize for reuse of existing installed
 packages.
 
-The ``--force`` flag in addition tells Spack to overwrite its previous
+The ``--force`` flag in addition tells Spack to overwrite its previous 
-concretization decisions, allowing you to choose a new version of Python.
+concretization decisions, allowing you to choose a new version of Python. 
-If any of the new packages like Bash are already installed, ``spack install``
+If any of the new packages like Bash are already installed, ``spack install`` 
 won't re-install them, it will keep the symlinks in place.
 
 -----------------------------------
 Updating & Cleaning Up Old Packages
 -----------------------------------
 
-If you're looking to mimic the behavior of Homebrew, you may also want to
+If you're looking to mimic the behavior of Homebrew, you may also want to 
-clean up out-of-date packages from your environment after an upgrade. To
+clean up out-of-date packages from your environment after an upgrade. To 
-upgrade your entire software stack within an environment and clean up old
+upgrade your entire software stack within an environment and clean up old 
 package versions, simply run the following commands:
 
 .. code-block:: console
@@ -212,9 +212,9 @@ package versions, simply run the following commands:
    $ spack concretize --fresh --force
    $ spack install
    $ spack gc
-
+   
-Running ``spack mark -i --all`` tells Spack to mark all of the existing
+Running ``spack mark -i --all`` tells Spack to mark all of the existing 
-packages within an environment as "implicitly" installed. This tells
+packages within an environment as "implicitly" installed. This tells 
 spack's garbage collection system that these packages should be cleaned up.
 
 Don't worry however, this will not remove your entire environment.
@@ -223,8 +223,8 @@ a fresh concretization and will re-mark any packages that should remain
 installed as "explicitly" installed.
 
 **Note:** if you use multiple spack environments you should re-run ``spack install``
-in each of your environments prior to running ``spack gc`` to prevent spack
+in each of your environments prior to running ``spack gc`` to prevent spack 
-from uninstalling any shared packages that are no longer required by the
+from uninstalling any shared packages that are no longer required by the 
 environment you just upgraded.
 
 --------------

lib/spack/docs/requirements.txt

@@ -1,13 +1,13 @@
-sphinx==7.2.6
+# These dependencies should be installed using pip in order
-sphinxcontrib-programoutput==0.17
+# to build the documentation.
-sphinx_design==0.5.0
+
-sphinx-rtd-theme==2.0.0
+sphinx>=3.4,!=4.1.2,!=5.1.0
-python-levenshtein==0.23.0
+sphinxcontrib-programoutput
-docutils==0.20.1
+sphinx-design
-pygments==2.17.2
+sphinx-rtd-theme
-urllib3==2.1.0
+python-levenshtein
-pytest==7.4.3
+# Restrict to docutils <0.17 to workaround a list rendering issue in sphinx.
-isort==5.12.0
+# https://stackoverflow.com/questions/67542699
-black==23.11.0
+docutils <0.17
-flake8==6.1.0
+pygments <2.13
-mypy==1.7.1
+urllib3 <2

lib/spack/docs/signing.rst

@@ -1,478 +0,0 @@
-.. Copyright 2013-2022 Lawrence Livermore National Security, LLC and other
-   Spack Project Developers. See the top-level COPYRIGHT file for details.
-
-   SPDX-License-Identifier: (Apache-2.0 OR MIT)
-
-.. _signing:
-
-=====================
-Spack Package Signing
-=====================
-
-The goal of package signing in Spack is to provide data integrity
-assurances around official packages produced by the automated Spack CI
-pipelines. These assurances directly address the security of Spack’s
-software supply chain by explaining why a security-conscious user can
-be reasonably justified in the belief that packages installed via Spack
-have an uninterrupted auditable trail back to change management
-decisions judged to be appropriate by the Spack maintainers. This is
-achieved through cryptographic signing of packages built by Spack CI
-pipelines based on code that has been transparently reviewed and
-approved on GitHub. This document describes the signing process for
-interested users.
-
-.. _risks:
-
-------------------------------
-Risks, Impact and Threat Model
-------------------------------
-
-This document addresses the approach taken to safeguard Spack’s
-reputation with regard to the integrity of the package data produced by
-Spack’s CI pipelines. It does not address issues of data confidentiality
-(Spack is intended to be largely open source) or availability (efforts
-are described elsewhere). With that said the main reputational risk can
-be broadly categorized as a loss of faith in the data integrity due to a
-breach of the private key used to sign packages. Remediation of a
-private key breach would require republishing the public key with a
-revocation certificate, generating a new signing key, an assessment and
-potential rebuild/resigning of all packages since the key was breached,
-and finally direct intervention by every spack user to update their copy
-of Spack’s public keys used for local verification.
-
-The primary threat model used in mitigating the risks of these stated
-impacts is one of individual error not malicious intent or insider
-threat. The primary objective is to avoid the above impacts by making a
-private key breach nearly impossible due to oversight or configuration
-error. Obvious and straightforward measures are taken to mitigate issues
-of malicious interference in data integrity and insider threats but
-these attack vectors are not systematically addressed. It should be hard
-to exfiltrate the private key intentionally, and almost impossible to
-leak the key by accident.
-
-.. _overview:
-
------------------
-Pipeline Overview
------------------
-
-Spack pipelines build software through progressive stages where packages
-in later stages nominally depend on packages built in earlier stages.
-For both technical and design reasons these dependencies are not
-implemented through the default GitLab artifacts mechanism; instead
-built packages are uploaded to AWS S3 mirrors (buckets) where they are
-retrieved by subsequent stages in the pipeline. Two broad categories of
-pipelines exist: Pull Request (PR) pipelines and Develop/Release
-pipelines.
-
--  PR pipelines are launched in response to pull requests made by
-   trusted and untrusted users. Packages built on these pipelines upload
-   code to quarantined AWS S3 locations which cache the built packages
-   for the purposes of review and iteration on the changes proposed in
-   the pull request. Packages built on PR pipelines can come from
-   untrusted users so signing of these pipelines is not implemented.
-   Jobs in these pipelines are executed via normal GitLab runners both
-   within the AWS GitLab infrastructure and at affiliated institutions.
--  Develop and Release pipelines **sign** the packages they produce and carry
-   strong integrity assurances that trace back to auditable change management
-   decisions. These pipelines only run after members from a trusted group of
-   reviewers verify that the proposed changes in a pull request are appropriate.
-   Once the PR is merged, or a release is cut, a pipeline is run on protected
-   GitLab runners which provide access to the required signing keys within the
-   job. Intermediary keys are used to sign packages in each stage of the
-   pipeline as they are built and a final job officially signs each package
-   external to any specific packages’ build environment. An intermediate key
-   exists in the AWS infrastructure and for each affiliated instritution that
-   maintains protected runners. The runners that execute these pipelines
-   exclusively accept jobs from protected branches meaning the intermediate keys
-   are never exposed to unreviewed code and the official keys are never exposed
-   to any specific build environment.
-
-.. _key_architecture:
-
-----------------
-Key Architecture
-----------------
-
-Spack’s CI process uses public-key infrastructure (PKI) based on GNU Privacy
-Guard (gpg) keypairs to sign public releases of spack package metadata, also
-called specs. Two classes of GPG keys are involved in the process to reduce the
-impact of an individual private key compromise, these key classes are the
-*Intermediate CI Key* and *Reputational Key*. Each of these keys has signing
-sub-keys that are used exclusively for signing packages. This can be confusing
-so for the purpose of this explanation we’ll refer to Root and Signing keys.
-Each key has a private and a public component as well as one or more identities
-and zero or more signatures.
-
--------------------
-Intermediate CI Key
--------------------
-
-The Intermediate key class is used to sign and verify packages between stages
-within a develop or release pipeline. An intermediate key exists for the AWS
-infrastructure as well as each affiliated institution that maintains protected
-runners. These intermediate keys are made available to the GitLab execution
-environment building the package so that the package’s dependencies may be
-verified by the Signing Intermediate CI Public Key and the final package may be
-signed by the Signing Intermediate CI Private Key.
-
-
-+---------------------------------------------------------------------------------------------------------+
-| **Intermediate CI Key (GPG)**                                                                           |
-+==================================================+======================================================+
-| Root Intermediate CI Private Key (RSA 4096)#     |     Root Intermediate CI Public Key (RSA 4096)       |
-+--------------------------------------------------+------------------------------------------------------+
-|   Signing Intermediate CI Private Key (RSA 4096) |        Signing Intermediate CI Public Key (RSA 4096) |
-+--------------------------------------------------+------------------------------------------------------+
-| Identity: “Intermediate CI Key <maintainers@spack.io>”                                                  |
-+---------------------------------------------------------------------------------------------------------+
-| Signatures: None                                                                                        |
-+---------------------------------------------------------------------------------------------------------+
-
-
-The *Root intermediate CI Private Key*\ Is stripped out of the GPG key and
-stored offline completely separate from Spack’s infrastructure. This allows the
-core development team to append revocation certificates to the GPG key and
-issue new sub-keys for use in the pipeline. It is our expectation that this
-will happen on a semi regular basis. A corollary of this is that *this key
-should not be used to verify package integrity outside the internal CI process.*
-
-----------------
-Reputational Key
-----------------
-
-The Reputational Key is the public facing key used to sign complete groups of
-development and release packages. Only one key pair exsits in this class of
-keys. In contrast to the Intermediate CI Key the Reputational Key *should* be
-used to verify package integrity. At the end of develop and release pipeline a
-final pipeline job pulls down all signed package metadata built by the pipeline,
-verifies they were signed with an Intermediate CI Key, then strips the
-Intermediate CI Key signature from the package and re-signs them with the
-Signing Reputational Private Key. The officially signed packages are then
-uploaded back to the AWS S3 mirror. Please note that separating use of the
-reputational key into this final job is done to prevent leakage of the key in a
-spack package. Because the Signing Reputational Private Key is never exposed to
-a build job it cannot accidentally end up in any built package.
-
-
-+---------------------------------------------------------------------------------------------------------+
-| **Reputational Key (GPG)**                                                                              |
-+==================================================+======================================================+
-| Root Reputational Private Key (RSA 4096)#        |          Root Reputational Public Key (RSA 4096)     |
-+--------------------------------------------------+------------------------------------------------------+
-| Signing Reputational Private Key (RSA 4096)      |          Signing Reputational Public Key (RSA 4096)  |
-+--------------------------------------------------+------------------------------------------------------+
-| Identity: “Spack Project <maintainers@spack.io>”                                                        |
-+---------------------------------------------------------------------------------------------------------+
-| Signatures: Signed by core development team [#f1]_                                                      |
-+---------------------------------------------------------------------------------------------------------+
-
-The Root Reputational Private Key is stripped out of the GPG key and stored
-offline completely separate from Spack’s infrastructure. This allows the core
-development team to append revocation certificates to the GPG key in the
-unlikely event that the Signing Reputation Private Key is compromised. In
-general it is the expectation that rotating this key will happen infrequently if
-at all. This should allow relatively transparent verification for the end-user
-community without needing deep familiarity with GnuPG or Public Key
-Infrastructure.
-
-
-.. _build_cache_format:
-
-------------------
-Build Cache Format
-------------------
-
-A binary package consists of a metadata file unambiguously defining the
-built package (and including other details such as how to relocate it)
-and the installation directory of the package stored as a compressed
-archive file. The metadata files can either be unsigned, in which case
-the contents are simply the json-serialized concrete spec plus metadata,
-or they can be signed, in which case the json-serialized concrete spec
-plus metadata is wrapped in a gpg cleartext signature. Built package
-metadata files are named to indicate the operating system and
-architecture for which the package was built as well as the compiler
-used to build it and the packages name and version. For example::
-
-  linux-ubuntu18.04-haswell-gcc-7.5.0-zlib-1.2.12-llv2ysfdxnppzjrt5ldybb5c52qbmoow.spec.json.sig
-
-would contain the concrete spec and binary metadata for a binary package
-of ``zlib@1.2.12``, built for the ``ubuntu`` operating system and ``haswell``
-architecture. The id of the built package exists in the name of the file
-as well (after the package name and version) and in this case begins
-with ``llv2ys``. The id distinguishes a particular built package from all
-other built packages with the same os/arch, compiler, name, and version.
-Below is an example of a signed binary package metadata file. Such a
-file would live in the ``build_cache`` directory of a binary mirror::
-
-  -----BEGIN PGP SIGNED MESSAGE-----
-  Hash: SHA512
-
-  {
-    "spec": {
-      <concrete-spec-contents-omitted>
-    },
-
-    "buildcache_layout_version": 1,
-    "binary_cache_checksum": {
-      "hash_algorithm": "sha256",
-      "hash": "4f1e46452c35a5e61bcacca205bae1bfcd60a83a399af201a29c95b7cc3e1423"
-     }
-  }
-
-  -----BEGIN PGP SIGNATURE-----
-  iQGzBAEBCgAdFiEETZn0sLle8jIrdAPLx/P+voVcifMFAmKAGvwACgkQx/P+voVc
-  ifNoVgv/VrhA+wurVs5GB9PhmMA1m5U/AfXZb4BElDRwpT8ZcTPIv5X8xtv60eyn
-  4EOneGVbZoMThVxgev/NKARorGmhFXRqhWf+jknJZ1dicpqn/qpv34rELKUpgXU+
-  QDQ4d1P64AIdTczXe2GI9ZvhOo6+bPvK7LIsTkBbtWmopkomVxF0LcMuxAVIbA6b
-  887yBvVO0VGlqRnkDW7nXx49r3AG2+wDcoU1f8ep8QtjOcMNaPTPJ0UnjD0VQGW6
-  4ZFaGZWzdo45MY6tF3o5mqM7zJkVobpoW3iUz6J5tjz7H/nMlGgMkUwY9Kxp2PVH
-  qoj6Zip3LWplnl2OZyAY+vflPFdFh12Xpk4FG7Sxm/ux0r+l8tCAPvtw+G38a5P7
-  QEk2JBr8qMGKASmnRlJUkm1vwz0a95IF3S9YDfTAA2vz6HH3PtsNLFhtorfx8eBi
-  Wn5aPJAGEPOawEOvXGGbsH4cDEKPeN0n6cy1k92uPEmBLDVsdnur8q42jk5c2Qyx
-  j3DXty57
-  =3gvm
-  -----END PGP SIGNATURE-----
-
-If a user has trusted the public key associated with the private key
-used to sign the above spec file, the signature can be verified with
-gpg, as follows::
-
-  $ gpg –verify linux-ubuntu18.04-haswell-gcc-7.5.0-zlib-1.2.12-llv2ysfdxnppzjrt5ldybb5c52qbmoow.spec.json.sig
-
-The metadata (regardless whether signed or unsigned) contains the checksum
-of the ``.spack`` file containing the actual installation. The checksum should
-be compared to a checksum computed locally on the ``.spack`` file to ensure the
-contents have not changed since the binary spec plus metadata were signed. The
-``.spack`` files are actually tarballs containing the compressed archive of the
-install tree.  These files, along with the metadata files, live within the
-``build_cache`` directory of the mirror, and together are organized as follows::
-
-  build_cache/
-    # unsigned metadata (for indexing, contains sha256 of .spack file)
-    <arch>-<compiler>-<name>-<ver>-24zvipcqgg2wyjpvdq2ajy5jnm564hen.spec.json
-    # clearsigned metadata (same as above, but signed)
-    <arch>-<compiler>-<name>-<ver>-24zvipcqgg2wyjpvdq2ajy5jnm564hen.spec.json.sig
-    <arch>/
-      <compiler>/
-        <name>-<ver>/
-          # tar.gz-compressed prefix (may support more compression formats later)
-          <arch>-<compiler>-<name>-<ver>-24zvipcqgg2wyjpvdq2ajy5jnm564hen.spack
-
-Uncompressing and extracting the ``.spack`` file results in the install tree.
-This is in contrast to previous versions of spack, where the ``.spack`` file
-contained a (duplicated) metadata file, a signature file and a nested tarball
-containing the install tree.
-
-.. _internal_implementation:
-
------------------------
-Internal Implementation
------------------------
-
-The technical implementation of the pipeline signing process includes components
-defined in Amazon Web Services, the Kubernetes cluster, at affilicated
-institutions, and the GitLab/GitLab Runner deployment. We present the techincal
-implementation in two interdependent sections. The first addresses how secrets
-are managed through the lifecycle of a develop or release pipeline. The second
-section describes how Gitlab Runner and pipelines are configured and managed to
-support secure automated signing.
-
-Secrets Management
-^^^^^^^^^^^^^^^^^^
-
-As stated above the Root Private Keys (intermediate and reputational)
-are stripped from the GPG keys and stored outside Spack’s
-infrastructure.
-
-.. warning::
-  **TODO**
-    - Explanation here about where and how access is handled for these keys.
-    - Both Root private keys are protected with strong passwords
-    - Who has access to these and how?
-
-**Intermediate CI Key**
------------------------
-
-Multiple intermediate CI signing keys exist, one Intermediate CI Key for jobs
-run in AWS, and one key for each affiliated institution (e.g. Univerity of
-Oregon). Here we describe how the Intermediate CI Key is managed in AWS:
-
-The Intermediate CI Key (including the Signing Intermediate CI Private Key is
-exported as an ASCII armored file and stored in a Kubernetes secret called
-``spack-intermediate-ci-signing-key``. For convenience sake, this same secret
-contains an ASCII-armored export of just the *public* components of the
-Reputational Key. This secret also contains the *public* components of each of
-the affiliated institutions' Intermediate CI Key. These are potentially needed
-to verify dependent packages which may have been found in the public mirror or
-built by a protected job running on an affiliated institution's infrastrcuture
-in an earlier stage of the pipeline.
-
-Procedurally the ``spack-intermediate-ci-signing-key`` secret is used in
-the following way:
-
-1. A ``large-arm-prot`` or ``large-x86-prot`` protected runner picks up
-   a job tagged ``protected`` from a protected GitLab branch. (See
-   `Protected Runners and Reserved Tags <#_8bawjmgykv0b>`__).
-2. Based on its configuration, the runner creates a job Pod in the
-   pipeline namespace and mounts the spack-intermediate-ci-signing-key
-   Kubernetes secret into the build container
-3. The Intermediate CI Key, affiliated institutions' public key and the
-   Reputational Public Key are imported into a keyring by the ``spack gpg …``
-   sub-command. This is initiated by the job’s build script which is created by
-   the generate job at the beginning of the pipeline.
-4. Assuming the package has dependencies those specs are verified using
-   the keyring.
-5. The package is built and the spec.json is generated
-6. The spec.json is signed by the keyring and uploaded to the mirror’s
-   build cache.
-
-**Reputational Key**
---------------------
-
-Because of the increased impact to end users in the case of a private
-key breach, the Reputational Key is managed separately from the
-Intermediate CI Keys and has additional controls. First, the Reputational
-Key was generated outside of Spack’s infrastructure and has been signed
-by the core development team. The Reputational Key (along with the
-Signing Reputational Private Key) was then ASCII armor exported to a
-file. Unlike the Intermediate CI Key this exported file is not stored as
-a base64 encoded secret in Kubernetes. Instead\ *the key file
-itself*\ is encrypted and stored in Kubernetes as the
-``spack-signing-key-encrypted`` secret in the pipeline namespace.
-
-The encryption of the exported Reputational Key (including the Signing
-Reputational Private Key) is handled by `AWS Key Management Store (KMS) data
-keys
-<https://docs.aws.amazon.com/kms/latest/developerguide/concepts.html#data-keys>`__.
-The private key material is decrypted and imported at the time of signing into a
-memory mounted temporary directory holding the keychain. The signing job uses
-the `AWS Encryption SDK
-<https://docs.aws.amazon.com/encryption-sdk/latest/developer-guide/crypto-cli.html>`__
-(i.e. ``aws-encryption-cli``) to decrypt the Reputational Key. Permission to
-decrypt the key is granted to the job Pod through a Kubernetes service account
-specifically used for this, and only this, function. Finally, for convenience
-sake, this same secret contains an ASCII-armored export of the *public*
-components of the Intermediate CI Keys and the Reputational Key. This allows the
-signing script to verify that packages were built by the pipeline (both on AWS
-or at affiliated institutions), or signed previously as a part of a different
-pipeline. This is is done *before* importing decrypting and importing the
-Signing Reputational Private Key material and officially signing the packages.
-
-Procedurally the ``spack-singing-key-encrypted`` secret is used in the
-following way:
-
-1.  The ``spack-package-signing-gitlab-runner`` protected runner picks
-    up a job tagged ``notary`` from a protected GitLab branch (See
-    `Protected Runners and Reserved Tags <#_8bawjmgykv0b>`__).
-2.  Based on its configuration, the runner creates a job pod in the
-    pipeline namespace. The job is run in a stripped down purpose-built
-    image ``ghcr.io/spack/notary:latest`` Docker image. The runner is
-    configured to only allow running jobs with this image.
-3.  The runner also mounts the ``spack-signing-key-encrypted`` secret to
-    a path on disk. Note that this becomes several files on disk, the
-    public components of the Intermediate CI Keys, the public components
-    of the Reputational CI, and an AWS KMS encrypted file containing the
-    Singing Reputational Private Key.
-4.  In addition to the secret, the runner creates a tmpfs memory mounted
-    directory where the GnuPG keyring will be created to verify, and
-    then resign the package specs.
-5.  The job script syncs all spec.json.sig files from the build cache to
-    a working directory in the job’s execution environment.
-6.  The job script then runs the ``sign.sh`` script built into the
-    notary Docker image.
-7.  The ``sign.sh`` script imports the public components of the
-    Reputational and Intermediate CI Keys and uses them to verify good
-    signatures on the spec.json.sig files. If any signed spec does not
-    verify the job immediately fails.
-8.  Assuming all specs are verified, the ``sign.sh`` script then unpacks
-    the spec json data from the signed file in preparation for being
-    re-signed with the Reputational Key.
-9.  The private components of the Reputational Key are decrypted to
-    standard out using ``aws-encryption-cli`` directly into a ``gpg
-    –import …`` statement which imports the key into the
-    keyring mounted in-memory.
-10. The private key is then used to sign each of the json specs and the
-    keyring is removed from disk.
-11. The re-signed json specs are resynced to the AWS S3 Mirror and the
-    public signing of the packages for the develop or release pipeline
-    that created them is complete.
-
-Non service-account access to the private components of the Reputational
-Key that are managed through access to the symmetric secret in KMS used
-to encrypt the data key (which in turn is used to encrypt the GnuPG key
-- See:\ `Encryption SDK
-Documentation <https://docs.aws.amazon.com/encryption-sdk/latest/developer-guide/crypto-cli-examples.html#cli-example-encrypt-file>`__).
-A small trusted subset of the core development team are the only
-individuals with access to this symmetric key.
-
-.. _protected_runners:
-
-Protected Runners and Reserved Tags
-^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
-
-Spack has a large number of Gitlab Runners operating in its build farm.
-These include runners deployed in the AWS Kubernetes cluster as well as
-runners deployed at affiliated institutions. The majority of runners are
-shared runners that operate across projects in gitlab.spack.io. These
-runners pick up jobs primarily from the spack/spack project and execute
-them in PR pipelines.
-
-A small number of runners operating on AWS and at affiliated institutions are
-registered as specific *protected* runners on the spack/spack project. In
-addition to protected runners there are protected branches on the spack/spack
-project. These are the ``develop`` branch, any release branch (i.e. managed with
-the ``releases/v*`` wildcard) and any tag branch (managed with the ``v*``
-wildcard) Finally Spack’s pipeline generation code reserves certain tags to make
-sure jobs are routed to the correct runners, these tags are ``public``,
-``protected``, and ``notary``. Understanding how all this works together to
-protect secrets and provide integrity assurances can be a little confusing so
-lets break these down:
-
--  **Protected Branches**- Protected branches in Spack prevent anyone
-   other than Maintainers in GitLab from pushing code. In the case of
-   Spack the only Maintainer level entity pushing code to protected
-   branches is Spack bot. Protecting branches also marks them in such a
-   way that Protected Runners will only run jobs from those branches
-- **Protected Runners**- Protected Runners only run jobs from protected
-   branches. Because protected runners have access to secrets, it's critical
-   that they not run Jobs from untrusted code (i.e. PR branches). If they did it
-   would be possible for a PR branch to tag a job in such a way that a protected
-   runner executed that job and mounted secrets into a code execution
-   environment that had not been reviewed by Spack maintainers. Note however
-   that in the absence of tagging used to route jobs, public runners *could* run
-   jobs from protected branches. No secrets would be at risk of being breached
-   because non-protected runners do not have access to those secrets; lack of
-   secrets would, however, cause the jobs to fail.
-- **Reserved Tags**- To mitigate the issue of public runners picking up
-   protected jobs Spack uses a small set of “reserved” job tags (Note that these
-   are *job* tags not git tags). These tags are “public”, “private”, and
-   “notary.” The majority of jobs executed in Spack’s GitLab instance are
-   executed via a ``generate`` job. The generate job code systematically ensures
-   that no user defined configuration sets these tags. Instead, the ``generate``
-   job sets these tags based on rules related to the branch where this pipeline
-   originated. If the job is a part of a pipeline on a PR branch it sets the
-   ``public`` tag. If the job is part of a pipeline on a protected branch it
-   sets the ``protected`` tag. Finally if the job is the package signing job and
-   it is running on a pipeline that is part of a protected branch then it sets
-   the ``notary`` tag.
-
-Protected Runners are configured to only run jobs from protected branches. Only
-jobs running in pipelines on protected branches are tagged with ``protected`` or
-``notary`` tags. This tightly couples jobs on protected branches to protected
-runners that provide access to the secrets required to sign the built packages.
-The secrets are can **only** be accessed via:
-
-1. Runners under direct control of the core development team.
-2. Runners under direct control of trusted maintainers at affiliated institutions.
-3. By code running the automated pipeline that has been reviewed by the
-   Spack maintainers and judged to be appropriate.
-
-Other attempts (either through malicious intent or incompetence) can at
-worst grab jobs intended for protected runners which will cause those
-jobs to fail alerting both Spack maintainers and the core development
-team.
-
-.. [#f1]
-   The Reputational Key has also cross signed core development team
-   keys.

lib/spack/docs/tables/system_prerequisites.csv

@@ -1,7 +1,9 @@
 Name, Supported Versions, Notes, Requirement Reason
-Python, 3.6--3.12, , Interpreter for Spack
+Python, 3.6--3.11, , Interpreter for Spack
 C/C++ Compilers, , , Building software
+make, , , Build software
 patch, , , Build software
+bash, , , Compiler wrappers
 tar, , , Extract/create archives
 gzip, , , Compress/Decompress archives
 unzip, , , Compress/Decompress archives

lib/spack/env/cc

@@ -416,14 +416,30 @@ input_command="$*"
 # The lists are all bell-separated to be as flexible as possible, as their
 # contents may come from the command line, from ' '-separated lists,
 # ':'-separated lists, etc.
+include_dirs_list=""
+lib_dirs_list=""
+rpath_dirs_list=""
+system_include_dirs_list=""
+system_lib_dirs_list=""
+system_rpath_dirs_list=""
+isystem_system_include_dirs_list=""
+isystem_include_dirs_list=""
+libs_list=""
+other_args_list=""
+
+# Global state for keeping track of -Wl,-rpath -Wl,/path
+wl_expect_rpath=no
+
+# Same, but for -Xlinker -rpath -Xlinker /path
+xlinker_expect_rpath=no
 
 parse_Wl() {
     while [ $# -ne 0 ]; do
     if [ "$wl_expect_rpath" = yes ]; then
         if system_dir "$1"; then
-            append return_system_rpath_dirs_list "$1"
+            append system_rpath_dirs_list "$1"
         else
-            append return_rpath_dirs_list "$1"
+            append rpath_dirs_list "$1"
         fi
         wl_expect_rpath=no
     else
@@ -433,9 +449,9 @@ parse_Wl() {
                 if [ -z "$arg" ]; then
                     shift; continue
                 elif system_dir "$arg"; then
-                    append return_system_rpath_dirs_list "$arg"
+                    append system_rpath_dirs_list "$arg"
                 else
-                    append return_rpath_dirs_list "$arg"
+                    append rpath_dirs_list "$arg"
                 fi
                 ;;
             --rpath=*)
@@ -443,9 +459,9 @@ parse_Wl() {
                 if [ -z "$arg" ]; then
                     shift; continue
                 elif system_dir "$arg"; then
-                    append return_system_rpath_dirs_list "$arg"
+                    append system_rpath_dirs_list "$arg"
                 else
-                    append return_rpath_dirs_list "$arg"
+                    append rpath_dirs_list "$arg"
                 fi
                 ;;
             -rpath|--rpath)
@@ -459,7 +475,7 @@ parse_Wl() {
                 return 1
                 ;;
             *)
-                append return_other_args_list "-Wl,$1"
+                append other_args_list "-Wl,$1"
                 ;;
         esac
     fi
@@ -467,210 +483,177 @@ parse_Wl() {
     done
 }
 
-categorize_arguments() {
 
-    unset IFS
+while [ $# -ne 0 ]; do
 
-    return_other_args_list=""
+    # an RPATH to be added after the case statement.
-    return_isystem_was_used=""
+    rp=""
-    return_isystem_system_include_dirs_list=""
-    return_isystem_include_dirs_list=""
-    return_system_include_dirs_list=""
-    return_include_dirs_list=""
-    return_system_lib_dirs_list=""
-    return_lib_dirs_list=""
-    return_system_rpath_dirs_list=""
-    return_rpath_dirs_list=""
 
-    # Global state for keeping track of -Wl,-rpath -Wl,/path
+    # Multiple consecutive spaces in the command line can
-    wl_expect_rpath=no
+    # result in blank arguments
+    if [ -z "$1" ]; then
+        shift
+        continue
+    fi
 
-    # Same, but for -Xlinker -rpath -Xlinker /path
+    if [ -n "${SPACK_COMPILER_FLAGS_KEEP}" ] ; then
-    xlinker_expect_rpath=no
+        # NOTE: the eval is required to allow `|` alternatives inside the variable
-
+        eval "\
-    while [ $# -ne 0 ]; do
+        case \"\$1\" in
-
+            $SPACK_COMPILER_FLAGS_KEEP)
-        # an RPATH to be added after the case statement.
+                append other_args_list \"\$1\"
-        rp=""
-
-        # Multiple consecutive spaces in the command line can
-        # result in blank arguments
-        if [ -z "$1" ]; then
-            shift
-            continue
-        fi
-
-        if [ -n "${SPACK_COMPILER_FLAGS_KEEP}" ] ; then
-            # NOTE: the eval is required to allow `|` alternatives inside the variable
-            eval "\
-            case \"\$1\" in
-                $SPACK_COMPILER_FLAGS_KEEP)
-                    append return_other_args_list \"\$1\"
-                    shift
-                    continue
-                    ;;
-            esac
-            "
-        fi
-        # the replace list is a space-separated list of pipe-separated pairs,
-        # the first in each pair is the original prefix to be matched, the
-        # second is the replacement prefix
-        if [ -n "${SPACK_COMPILER_FLAGS_REPLACE}" ] ; then
-            for rep in ${SPACK_COMPILER_FLAGS_REPLACE} ; do
-                before=${rep%|*}
-                after=${rep#*|}
-                eval "\
-                stripped=\"\${1##$before}\"
-                "
-                if [ "$stripped" = "$1" ] ; then
-                    continue
-                fi
-
-                replaced="$after$stripped" 
-
-                # it matched, remove it
                 shift
-
+                continue
-                if [ -z "$replaced" ] ; then
-                    # completely removed, continue OUTER loop
-                    continue 2
-                fi
-
-                # re-build argument list with replacement
-                set -- "$replaced" "$@"
-            done
-        fi
-
-        case "$1" in
-            -isystem*)
-                arg="${1#-isystem}"
-                return_isystem_was_used=true
-                if [ -z "$arg" ]; then shift; arg="$1"; fi
-                if system_dir "$arg"; then
-                    append return_isystem_system_include_dirs_list "$arg"
-                else
-                    append return_isystem_include_dirs_list "$arg"
-                fi
-                ;;
-            -I*)
-                arg="${1#-I}"
-                if [ -z "$arg" ]; then shift; arg="$1"; fi
-                if system_dir "$arg"; then
-                    append return_system_include_dirs_list "$arg"
-                else
-                    append return_include_dirs_list "$arg"
-                fi
-                ;;
-            -L*)
-                arg="${1#-L}"
-                if [ -z "$arg" ]; then shift; arg="$1"; fi
-                if system_dir "$arg"; then
-                    append return_system_lib_dirs_list "$arg"
-                else
-                    append return_lib_dirs_list "$arg"
-                fi
-                ;;
-            -l*)
-                # -loopopt=0 is generated erroneously in autoconf <= 2.69,
-                # and passed by ifx to the linker, which confuses it with a
-                # library. Filter it out.
-                # TODO: generalize filtering of args with an env var, so that
-                # TODO: we do not have to special case this here.
-                if { [ "$mode" = "ccld" ] || [ $mode = "ld" ]; } \
-                    && [ "$1" != "${1#-loopopt}" ]; then
-                    shift
-                    continue
-                fi
-                arg="${1#-l}"
-                if [ -z "$arg" ]; then shift; arg="$1"; fi
-                append return_other_args_list "-l$arg"
-                ;;
-            -Wl,*)
-                IFS=,
-                if ! parse_Wl ${1#-Wl,}; then
-                    append return_other_args_list "$1"
-                fi
-                unset IFS
-                ;;
-            -Xlinker)
-                shift
-                if [ $# -eq 0 ]; then
-                    # -Xlinker without value: let the compiler error about it.
-                    append return_other_args_list -Xlinker
-                    xlinker_expect_rpath=no
-                    break
-                elif [ "$xlinker_expect_rpath" = yes ]; then
-                    # Register the path of -Xlinker -rpath <other args> -Xlinker <path>
-                    if system_dir "$1"; then
-                        append return_system_rpath_dirs_list "$1"
-                    else
-                        append return_rpath_dirs_list "$1"
-                    fi
-                    xlinker_expect_rpath=no
-                else
-                    case "$1" in
-                        -rpath=*)
-                            arg="${1#-rpath=}"
-                            if system_dir "$arg"; then
-                                append return_system_rpath_dirs_list "$arg"
-                            else
-                                append return_rpath_dirs_list "$arg"
-                            fi
-                            ;;
-                        --rpath=*)
-                            arg="${1#--rpath=}"
-                            if system_dir "$arg"; then
-                                append return_system_rpath_dirs_list "$arg"
-                            else
-                                append return_rpath_dirs_list "$arg"
-                            fi
-                            ;;
-                        -rpath|--rpath)
-                            xlinker_expect_rpath=yes
-                            ;;
-                        "$dtags_to_strip")
-                            ;;
-                        *)
-                            append return_other_args_list -Xlinker
-                            append return_other_args_list "$1"
-                            ;;
-                    esac
-                fi
-                ;;
-            "$dtags_to_strip")
-                ;;
-            *)
-                append return_other_args_list "$1"
                 ;;
         esac
-        shift
+        "
-    done
+    fi
+    # the replace list is a space-separated list of pipe-separated pairs,
+    # the first in each pair is the original prefix to be matched, the
+    # second is the replacement prefix
+    if [ -n "${SPACK_COMPILER_FLAGS_REPLACE}" ] ; then
+        for rep in ${SPACK_COMPILER_FLAGS_REPLACE} ; do
+            before=${rep%|*}
+            after=${rep#*|}
+            eval "\
+            stripped=\"\${1##$before}\"
+            "
+            if [ "$stripped" = "$1" ] ; then
+                continue
+            fi
 
-    # We found `-Xlinker -rpath` but no matching value `-Xlinker /path`. Just append
+            replaced="$after$stripped" 
-    # `-Xlinker -rpath` again and let the compiler or linker handle the error during arg
+
-    # parsing.
+            # it matched, remove it
-    if [ "$xlinker_expect_rpath" = yes ]; then
+            shift
-        append return_other_args_list -Xlinker
+
-        append return_other_args_list -rpath
+            if [ -z "$replaced" ] ; then
+                # completely removed, continue OUTER loop
+                continue 2
+            fi
+
+            # re-build argument list with replacement
+            set -- "$replaced" "$@"
+        done
     fi
 
-    # Same, but for -Wl flags.
+    case "$1" in
-    if [ "$wl_expect_rpath" = yes ]; then
+        -isystem*)
-        append return_other_args_list -Wl,-rpath
+            arg="${1#-isystem}"
-    fi
+            isystem_was_used=true
-}
+            if [ -z "$arg" ]; then shift; arg="$1"; fi
+            if system_dir "$arg"; then
+                append isystem_system_include_dirs_list "$arg"
+            else
+                append isystem_include_dirs_list "$arg"
+            fi
+            ;;
+        -I*)
+            arg="${1#-I}"
+            if [ -z "$arg" ]; then shift; arg="$1"; fi
+            if system_dir "$arg"; then
+                append system_include_dirs_list "$arg"
+            else
+                append include_dirs_list "$arg"
+            fi
+            ;;
+        -L*)
+            arg="${1#-L}"
+            if [ -z "$arg" ]; then shift; arg="$1"; fi
+            if system_dir "$arg"; then
+                append system_lib_dirs_list "$arg"
+            else
+                append lib_dirs_list "$arg"
+            fi
+            ;;
+        -l*)
+            # -loopopt=0 is generated erroneously in autoconf <= 2.69,
+            # and passed by ifx to the linker, which confuses it with a
+            # library. Filter it out.
+            # TODO: generalize filtering of args with an env var, so that
+            # TODO: we do not have to special case this here.
+            if { [ "$mode" = "ccld" ] || [ $mode = "ld" ]; } \
+                && [ "$1" != "${1#-loopopt}" ]; then
+                shift
+                continue
+            fi
+            arg="${1#-l}"
+            if [ -z "$arg" ]; then shift; arg="$1"; fi
+            append other_args_list "-l$arg"
+            ;;
+        -Wl,*)
+            IFS=,
+            if ! parse_Wl ${1#-Wl,}; then
+                append other_args_list "$1"
+            fi
+            unset IFS
+            ;;
+        -Xlinker)
+            shift
+            if [ $# -eq 0 ]; then
+                # -Xlinker without value: let the compiler error about it.
+                append other_args_list -Xlinker
+                xlinker_expect_rpath=no
+                break
+            elif [ "$xlinker_expect_rpath" = yes ]; then
+                # Register the path of -Xlinker -rpath <other args> -Xlinker <path>
+                if system_dir "$1"; then
+                    append system_rpath_dirs_list "$1"
+                else
+                    append rpath_dirs_list "$1"
+                fi
+                xlinker_expect_rpath=no
+            else
+                case "$1" in
+                    -rpath=*)
+                        arg="${1#-rpath=}"
+                        if system_dir "$arg"; then
+                            append system_rpath_dirs_list "$arg"
+                        else
+                            append rpath_dirs_list "$arg"
+                        fi
+                        ;;
+                    --rpath=*)
+                        arg="${1#--rpath=}"
+                        if system_dir "$arg"; then
+                            append system_rpath_dirs_list "$arg"
+                        else
+                            append rpath_dirs_list "$arg"
+                        fi
+                        ;;
+                    -rpath|--rpath)
+                        xlinker_expect_rpath=yes
+                        ;;
+                    "$dtags_to_strip")
+                        ;;
+                    *)
+                        append other_args_list -Xlinker
+                        append other_args_list "$1"
+                        ;;
+                esac
+            fi
+            ;;
+        "$dtags_to_strip")
+            ;;
+        *)
+            append other_args_list "$1"
+            ;;
+    esac
+    shift
+done
 
-categorize_arguments "$@"
+# We found `-Xlinker -rpath` but no matching value `-Xlinker /path`. Just append
-    include_dirs_list="$return_include_dirs_list"
+# `-Xlinker -rpath` again and let the compiler or linker handle the error during arg
-    lib_dirs_list="$return_lib_dirs_list"
+# parsing.
-    rpath_dirs_list="$return_rpath_dirs_list"
+if [ "$xlinker_expect_rpath" = yes ]; then
-    system_include_dirs_list="$return_system_include_dirs_list"
+    append other_args_list -Xlinker
-    system_lib_dirs_list="$return_system_lib_dirs_list"
+    append other_args_list -rpath
-    system_rpath_dirs_list="$return_system_rpath_dirs_list"
+fi
-    isystem_was_used="$return_isystem_was_used"
+
-    isystem_system_include_dirs_list="$return_isystem_system_include_dirs_list"
+# Same, but for -Wl flags.
-    isystem_include_dirs_list="$return_isystem_include_dirs_list"
+if [ "$wl_expect_rpath" = yes ]; then
-    other_args_list="$return_other_args_list"
+    append other_args_list -Wl,-rpath
+fi
 
 #
 # Add flags from Spack's cppflags, cflags, cxxflags, fcflags, fflags, and
@@ -690,14 +673,12 @@ elif [ "$SPACK_ADD_DEBUG_FLAGS" = "custom" ]; then
     extend flags_list SPACK_DEBUG_FLAGS
 fi
 
-spack_flags_list=""
-
 # Fortran flags come before CPPFLAGS
 case "$mode" in
     cc|ccld)
         case $lang_flags in
             F)
-                extend spack_flags_list SPACK_FFLAGS
+                extend flags_list SPACK_FFLAGS
                 ;;
         esac
         ;;
@@ -706,7 +687,7 @@ esac
 # C preprocessor flags come before any C/CXX flags
 case "$mode" in
     cpp|as|cc|ccld)
-        extend spack_flags_list SPACK_CPPFLAGS
+        extend flags_list SPACK_CPPFLAGS
         ;;
 esac
 
@@ -716,10 +697,10 @@ case "$mode" in
     cc|ccld)
         case $lang_flags in
             C)
-                extend spack_flags_list SPACK_CFLAGS
+                extend flags_list SPACK_CFLAGS
                 ;;
             CXX)
-                extend spack_flags_list SPACK_CXXFLAGS
+                extend flags_list SPACK_CXXFLAGS
                 ;;
         esac
 
@@ -731,25 +712,10 @@ esac
 # Linker flags
 case "$mode" in
     ld|ccld)
-        extend spack_flags_list SPACK_LDFLAGS
+        extend flags_list SPACK_LDFLAGS
         ;;
 esac
 
-IFS="$lsep"
-    categorize_arguments $spack_flags_list
-unset IFS
-        spack_flags_include_dirs_list="$return_include_dirs_list"
-        spack_flags_lib_dirs_list="$return_lib_dirs_list"
-        spack_flags_rpath_dirs_list="$return_rpath_dirs_list"
-        spack_flags_system_include_dirs_list="$return_system_include_dirs_list"
-        spack_flags_system_lib_dirs_list="$return_system_lib_dirs_list"
-        spack_flags_system_rpath_dirs_list="$return_system_rpath_dirs_list"
-        spack_flags_isystem_was_used="$return_isystem_was_used"
-        spack_flags_isystem_system_include_dirs_list="$return_isystem_system_include_dirs_list"
-        spack_flags_isystem_include_dirs_list="$return_isystem_include_dirs_list"
-        spack_flags_other_args_list="$return_other_args_list"
-
-
 # On macOS insert headerpad_max_install_names linker flag
 if [ "$mode" = ld ] || [ "$mode" = ccld ]; then
     if [ "${SPACK_SHORT_SPEC#*darwin}" != "${SPACK_SHORT_SPEC}" ]; then
@@ -775,8 +741,6 @@ if [ "$mode" = ccld ] || [ "$mode" = ld ]; then
     extend lib_dirs_list SPACK_LINK_DIRS
 fi
 
-libs_list=""
-
 # add RPATHs if we're in in any linking mode
 case "$mode" in
     ld|ccld)
@@ -805,16 +769,12 @@ args_list="$flags_list"
 
 # Insert include directories just prior to any system include directories
 # NOTE: adding ${lsep} to the prefix here turns every added element into two
-extend args_list spack_flags_include_dirs_list "-I"
 extend args_list include_dirs_list "-I"
-extend args_list spack_flags_isystem_include_dirs_list "-isystem${lsep}"
 extend args_list isystem_include_dirs_list "-isystem${lsep}"
 
 case "$mode" in
     cpp|cc|as|ccld)
-        if [ "$spack_flags_isystem_was_used" = "true" ]; then
+        if [ "$isystem_was_used" = "true" ]; then
-            extend args_list SPACK_INCLUDE_DIRS "-isystem${lsep}"
-        elif [ "$isystem_was_used" = "true" ]; then
             extend args_list SPACK_INCLUDE_DIRS "-isystem${lsep}"
         else
             extend args_list SPACK_INCLUDE_DIRS "-I"
@@ -822,15 +782,11 @@ case "$mode" in
         ;;
 esac
 
-extend args_list spack_flags_system_include_dirs_list -I
 extend args_list system_include_dirs_list -I
-extend args_list spack_flags_isystem_system_include_dirs_list "-isystem${lsep}"
 extend args_list isystem_system_include_dirs_list "-isystem${lsep}"
 
 # Library search paths
-extend args_list spack_flags_lib_dirs_list "-L"
 extend args_list lib_dirs_list "-L"
-extend args_list spack_flags_system_lib_dirs_list "-L"
 extend args_list system_lib_dirs_list "-L"
 
 # RPATHs arguments
@@ -839,25 +795,20 @@ case "$mode" in
         if [ -n "$dtags_to_add" ] ; then
             append args_list "$linker_arg$dtags_to_add"
         fi
-        extend args_list spack_flags_rpath_dirs_list "$rpath"
         extend args_list rpath_dirs_list "$rpath"
-        extend args_list spack_flags_system_rpath_dirs_list "$rpath"
         extend args_list system_rpath_dirs_list "$rpath"
         ;;
     ld)
         if [ -n "$dtags_to_add" ] ; then
             append args_list "$dtags_to_add"
         fi
-        extend args_list spack_flags_rpath_dirs_list "-rpath${lsep}"
         extend args_list rpath_dirs_list "-rpath${lsep}"
-        extend args_list spack_flags_system_rpath_dirs_list "-rpath${lsep}"
         extend args_list system_rpath_dirs_list "-rpath${lsep}"
         ;;
 esac
 
 # Other arguments from the input command
 extend args_list other_args_list
-extend args_list spack_flags_other_args_list
 
 # Inject SPACK_LDLIBS, if supplied
 extend args_list libs_list "-l"
@@ -913,4 +864,3 @@ fi
 # Execute the full command, preserving spaces with IFS set
 # to the alarm bell separator.
 IFS="$lsep"; exec $full_command_list
-

lib/spack/external/__init__.py

@@ -18,7 +18,7 @@
 
 * Homepage: https://pypi.python.org/pypi/archspec
 * Usage: Labeling, comparison and detection of microarchitectures
-* Version: 0.2.2 (commit 1dc58a5776dd77e6fc6e4ba5626af5b1fb24996e)
+* Version: 0.2.1 (commit 9e1117bd8a2f0581bced161f2a2e8d6294d0300b)
 
 astunparse
 ----------------

lib/spack/external/archspec/__init__.py

@@ -1,2 +1,2 @@
 """Init file to avoid namespace packages"""
-__version__ = "0.2.2"
+__version__ = "0.2.0"

lib/spack/external/archspec/cpu/microarchitecture.py

@@ -79,18 +79,14 @@ def __init__(self, name, parents, vendor, features, compilers, generation=0):
         self.features = features
         self.compilers = compilers
         self.generation = generation
-        # Cache the ancestor computation
-        self._ancestors = None
 
     @property
     def ancestors(self):
         """All the ancestors of this microarchitecture."""
-        if self._ancestors is None:
+        value = self.parents[:]
-            value = self.parents[:]
+        for parent in self.parents:
-            for parent in self.parents:
+            value.extend(a for a in parent.ancestors if a not in value)
-                value.extend(a for a in parent.ancestors if a not in value)
+        return value
-            self._ancestors = value
-        return self._ancestors
 
     def _to_set(self):
         """Returns a set of the nodes in this microarchitecture DAG."""

lib/spack/external/archspec/json/cpu/microarchitectures.json

@@ -145,13 +145,6 @@
             "flags": "-march={name} -mtune=generic -mcx16 -msahf -mpopcnt -msse3 -msse4.1 -msse4.2 -mssse3"
           }
         ],
-        "intel": [
-          {
-            "versions": "16.0:",
-            "name": "corei7",
-            "flags": "-march={name} -mtune=generic -mpopcnt"
-          }
-        ],
         "oneapi": [
           {
             "versions": "2021.2.0:",
@@ -224,13 +217,6 @@
             "flags": "-march={name} -mtune=generic -mcx16 -msahf -mpopcnt -msse3 -msse4.1 -msse4.2 -mssse3 -mavx -mavx2 -mbmi -mbmi2 -mf16c -mfma -mlzcnt -mmovbe -mxsave"
           }
         ],
-        "intel": [
-          {
-            "versions": "16.0:",
-            "name": "core-avx2",
-            "flags": "-march={name} -mtune={name} -fma -mf16c"
-          }
-        ],
         "oneapi": [
           {
             "versions": "2021.2.0:",
@@ -314,13 +300,6 @@
             "flags": "-march={name} -mtune=generic -mcx16 -msahf -mpopcnt -msse3 -msse4.1 -msse4.2 -mssse3 -mavx -mavx2 -mbmi -mbmi2 -mf16c -mfma -mlzcnt -mmovbe -mxsave -mavx512f -mavx512bw -mavx512cd -mavx512dq -mavx512vl"
           }
         ],
-        "intel": [
-            {
-            "versions": "16.0:",
-            "name": "skylake-avx512",
-            "flags": "-march={name} -mtune={name}"
-            }
-        ],
         "oneapi": [
           {
             "versions": "2021.2.0:",
@@ -1433,92 +1412,6 @@
         ]
       }
     },
-    "sapphirerapids": {
-      "from": [
-        "icelake"
-      ],
-      "vendor": "GenuineIntel",
-      "features": [
-        "mmx",
-        "sse",
-        "sse2",
-        "ssse3",
-        "sse4_1",
-        "sse4_2",
-        "popcnt",
-        "aes",
-        "pclmulqdq",
-        "avx",
-        "rdrand",
-        "f16c",
-        "movbe",
-        "fma",
-        "avx2",
-        "bmi1",
-        "bmi2",
-        "rdseed",
-        "adx",
-        "clflushopt",
-        "xsavec",
-        "xsaveopt",
-        "avx512f",
-        "avx512vl",
-        "avx512bw",
-        "avx512dq",
-        "avx512cd",
-        "avx512vbmi",
-        "avx512ifma",
-        "sha_ni",
-        "clwb",
-        "rdpid",
-        "gfni",
-        "avx512_vbmi2",
-        "avx512_vpopcntdq",
-        "avx512_bitalg",
-        "avx512_vnni",
-        "vpclmulqdq",
-        "vaes",
-        "avx512_bf16",
-        "cldemote",
-        "movdir64b",
-        "movdiri",
-        "pdcm",
-        "serialize",
-        "waitpkg"
-      ],
-      "compilers": {
-        "gcc": [
-          {
-            "versions": "11.0:",
-            "flags": "-march={name} -mtune={name}"
-          }
-        ],
-        "clang": [
-          {
-            "versions": "12.0:",
-            "flags": "-march={name} -mtune={name}"
-          }
-        ],
-        "intel": [
-          {
-            "versions": "2021.2:",
-            "flags": "-march={name} -mtune={name}"
-          }
-        ],
-        "oneapi": [
-          {
-            "versions": "2021.2:",
-            "flags": "-march={name} -mtune={name}"
-          }
-        ],
-        "dpcpp": [
-          {
-              "versions": "2021.2:",
-            "flags": "-march={name} -mtune={name}"
-          }
-        ]
-      }
-    },
     "k10": {
       "from": ["x86_64"],
       "vendor": "AuthenticAMD",
@@ -2172,6 +2065,8 @@
         "pku",
         "gfni",
         "flush_l1d",
+        "erms",
+        "avic",
         "avx512f",
         "avx512dq",
         "avx512ifma",
@@ -2188,12 +2083,12 @@
       "compilers": {
         "gcc": [
           {
-            "versions": "10.3:12.2",
+            "versions": "10.3:13.0",
             "name": "znver3",
             "flags": "-march={name} -mtune={name} -mavx512f -mavx512dq -mavx512ifma -mavx512cd -mavx512bw -mavx512vl -mavx512vbmi -mavx512vbmi2 -mavx512vnni -mavx512bitalg"
           },
           {
-            "versions": "12.3:",
+            "versions": "13.1:",
             "name": "znver4",
             "flags": "-march={name} -mtune={name}"
           }
@@ -2318,26 +2213,6 @@
         ]
       }
     },
-    "power10": {
-      "from": ["power9"],
-      "vendor": "IBM",
-      "generation": 10,
-      "features": [],
-      "compilers": {
-        "gcc": [
-          {
-            "versions": "11.1:",
-            "flags": "-mcpu={name} -mtune={name}"
-          }
-        ],
-        "clang": [
-          {
-            "versions": "11.0:",
-            "flags": "-mcpu={name} -mtune={name}"
-          }
-        ]
-      }
-    },
     "ppc64le": {
       "from": [],
       "vendor": "generic",
@@ -2425,29 +2300,6 @@
         ]
       }
     },
-    "power10le": {
-      "from": ["power9le"],
-      "vendor": "IBM",
-      "generation": 10,
-      "features": [],
-      "compilers": {
-        "gcc": [
-          {
-            "name": "power10",
-            "versions": "11.1:",
-            "flags": "-mcpu={name} -mtune={name}"
-          }
-        ],
-        "clang": [
-          {
-            "versions": "11.0:",
-            "family": "ppc64le",
-            "name": "power10",
-            "flags": "-mcpu={name} -mtune={name}"
-          }
-        ]
-      }
-    },
     "aarch64": {
       "from": [],
       "vendor": "generic",
@@ -2635,37 +2487,6 @@
         ]
       }
     },
-    "armv9.0a": {
-      "from": ["armv8.5a"],
-      "vendor": "generic",
-      "features": [],
-      "compilers": {
-        "gcc": [
-          {
-            "versions": "12:",
-            "flags": "-march=armv9-a -mtune=generic"
-          }
-        ],
-        "clang": [
-          {
-            "versions": "14:",
-            "flags": "-march=armv9-a -mtune=generic"
-          }
-        ],
-        "apple-clang": [
-          {
-            "versions": ":",
-            "flags": "-march=armv9-a -mtune=generic"
-          }
-        ],
-        "arm": [
-          {
-            "versions": ":",
-            "flags": "-march=armv9-a -mtune=generic"
-          }
-        ]
-      }
-    },
     "thunderx2": {
       "from": ["armv8.1a"],
       "vendor": "Cavium",
@@ -2887,12 +2708,8 @@
           ],
           "arm" : [
               {
-                  "versions": "20:21.9",
+                  "versions": "20:",
                   "flags" : "-march=armv8.2-a+fp16+rcpc+dotprod+crypto"
-              },
-              {
-                  "versions": "22:",
-                  "flags" : "-mcpu=neoverse-n1"
               }
           ],
           "nvhpc" : [
@@ -3020,7 +2837,7 @@
               },
 	            {
                   "versions": "22:",
-                  "flags" : "-mcpu=neoverse-v1"
+                  "flags" : "-march=armv8.4-a+sve+ssbs+fp16+bf16+crypto+i8mm+rng"
               }
           ],
           "nvhpc" : [
@@ -3032,126 +2849,6 @@
           ]
       }
     },
-    "neoverse_v2": {
-      "from": ["neoverse_n1", "armv9.0a"],
-      "vendor": "ARM",
-      "features": [
-          "fp",
-	  "asimd",
-	  "evtstrm",
-	  "aes",
-	  "pmull",
-	  "sha1",
-	  "sha2",
-	  "crc32",
-	  "atomics",
-	  "fphp",
-	  "asimdhp",
-	  "cpuid",
-	  "asimdrdm",
-	  "jscvt",
-	  "fcma",
-	  "lrcpc",
-	  "dcpop",
-	  "sha3",
-	  "sm3",
-	  "sm4",
-	  "asimddp",
-	  "sha512",
-	  "sve",
-	  "asimdfhm",
-	  "dit",
-	  "uscat",
-	  "ilrcpc",
-	  "flagm",
-	  "ssbs",
-	  "sb",
-	  "paca",
-	  "pacg",
-	  "dcpodp",
-	  "sve2",
-	  "sveaes",
-	  "svepmull",
-	  "svebitperm",
-	  "svesha3",
-	  "svesm4",
-	  "flagm2",
-	  "frint",
-	  "svei8mm",
-	  "svebf16",
-	  "i8mm",
-	  "bf16",
-	  "dgh",
-	  "bti"
-      ],
-      "compilers" : {
-          "gcc": [
-              {
-                  "versions": "4.8:5.99",
-                  "flags": "-march=armv8-a"
-              },
-              {
-                  "versions": "6:6.99",
-                  "flags" : "-march=armv8.1-a"
-              },
-              {
-                  "versions": "7.0:7.99",
-                  "flags" : "-march=armv8.2-a -mtune=cortex-a72"
-              },
-              {
-                  "versions": "8.0:8.99",
-                  "flags" : "-march=armv8.4-a+sve -mtune=cortex-a72"
-              },
-              {
-                  "versions": "9.0:9.99",
-                  "flags" : "-march=armv8.5-a+sve -mtune=cortex-a76"
-              },
-              {
-                  "versions": "10.0:11.99",
-                  "flags" : "-march=armv8.5-a+sve+sve2+i8mm+bf16 -mtune=cortex-a77"
-              },
-              {
-                  "versions": "12.0:12.99",
-                  "flags" : "-march=armv9-a+i8mm+bf16 -mtune=cortex-a710"
-              },
-	      {
-                  "versions": "13.0:",
-                  "flags" : "-mcpu=neoverse-v2"
-              }
-          ],
-          "clang" : [
-              {
-                  "versions": "9.0:10.99",
-                  "flags" : "-march=armv8.5-a+sve"
-              },
-              {
-                  "versions": "11.0:13.99",
-                  "flags" : "-march=armv8.5-a+sve+sve2+i8mm+bf16"
-              },
-              {
-                  "versions": "14.0:15.99",
-                  "flags" : "-march=armv9-a+i8mm+bf16"
-              },
-              {
-                  "versions": "16.0:",
-                  "flags" : "-mcpu=neoverse-v2"
-              }
-          ],
-          "arm" : [
-              {
-                  "versions": "23.04.0:",
-                  "flags" : "-mcpu=neoverse-v2"
-              }
-          ],
-          "nvhpc" : [
-              {
-                  "versions": "23.3:",
-                  "name": "neoverse-v2",
-                  "flags": "-tp {name}"
-              }
-          ]
-      }
-    },
     "m1": {
       "from": ["armv8.4a"],
       "vendor": "Apple",

lib/spack/external/ctest_log_parser.py

@@ -65,6 +65,9 @@
 up to date with CTest, just make sure the ``*_matches`` and
 ``*_exceptions`` lists are kept up to date with CTest's build handler.
 """
+from __future__ import print_function
+from __future__ import division
+
 import re
 import math
 import multiprocessing
@@ -208,7 +211,7 @@
 ]
 
 
-class LogEvent:
+class LogEvent(object):
     """Class representing interesting events (e.g., errors) in a build log."""
     def __init__(self, text, line_no,
                  source_file=None, source_line_no=None,
@@ -345,7 +348,7 @@ def _parse_unpack(args):
     return _parse(*args)
 
 
-class CTestLogParser:
+class CTestLogParser(object):
     """Log file parser that extracts errors and warnings."""
     def __init__(self, profile=False):
         # whether to record timing information

lib/spack/llnl/path.py

@@ -1,105 +0,0 @@
-# Copyright 2013-2023 Lawrence Livermore National Security, LLC and other
-# Spack Project Developers. See the top-level COPYRIGHT file for details.
-#
-# SPDX-License-Identifier: (Apache-2.0 OR MIT)
-"""Path primitives that just require Python standard library."""
-import functools
-import sys
-from typing import List, Optional
-from urllib.parse import urlparse
-
-
-class Path:
-    """Enum to identify the path-style."""
-
-    unix: int = 0
-    windows: int = 1
-    platform_path: int = windows if sys.platform == "win32" else unix
-
-
-def format_os_path(path: str, mode: int = Path.unix) -> str:
-    """Formats the input path to use consistent, platform specific separators.
-
-    Absolute paths are converted between drive letters and a prepended '/' as per platform
-    requirement.
-
-    Parameters:
-        path: the path to be normalized, must be a string or expose the replace method.
-        mode: the path file separator style to normalize the passed path to.
-            Default is unix style, i.e. '/'
-    """
-    if not path:
-        return path
-    if mode == Path.windows:
-        path = path.replace("/", "\\")
-    else:
-        path = path.replace("\\", "/")
-    return path
-
-
-def convert_to_posix_path(path: str) -> str:
-    """Converts the input path to POSIX style."""
-    return format_os_path(path, mode=Path.unix)
-
-
-def convert_to_windows_path(path: str) -> str:
-    """Converts the input path to Windows style."""
-    return format_os_path(path, mode=Path.windows)
-
-
-def convert_to_platform_path(path: str) -> str:
-    """Converts the input path to the current platform's native style."""
-    return format_os_path(path, mode=Path.platform_path)
-
-
-def path_to_os_path(*parameters: str) -> List[str]:
-    """Takes an arbitrary number of positional parameters, converts each argument of type
-    string to use a normalized filepath separator, and returns a list of all values.
-    """
-
-    def _is_url(path_or_url: str) -> bool:
-        if "\\" in path_or_url:
-            return False
-        url_tuple = urlparse(path_or_url)
-        return bool(url_tuple.scheme) and len(url_tuple.scheme) > 1
-
-    result = []
-    for item in parameters:
-        if isinstance(item, str) and not _is_url(item):
-            item = convert_to_platform_path(item)
-        result.append(item)
-    return result
-
-
-def system_path_filter(_func=None, arg_slice: Optional[slice] = None):
-    """Filters function arguments to account for platform path separators.
-    Optional slicing range can be specified to select specific arguments
-
-    This decorator takes all (or a slice) of a method's positional arguments
-    and normalizes usage of filepath separators on a per platform basis.
-
-    Note: `**kwargs`, urls, and any type that is not a string are ignored
-    so in such cases where path normalization is required, that should be
-    handled by calling path_to_os_path directly as needed.
-
-    Parameters:
-        arg_slice: a slice object specifying the slice of arguments
-            in the decorated method over which filepath separators are
-            normalized
-    """
-
-    def holder_func(func):
-        @functools.wraps(func)
-        def path_filter_caller(*args, **kwargs):
-            args = list(args)
-            if arg_slice:
-                args[arg_slice] = path_to_os_path(*args[arg_slice])
-            else:
-                args = path_to_os_path(*args)
-            return func(*args, **kwargs)
-
-        return path_filter_caller
-
-    if _func:
-        return holder_func(_func)
-    return holder_func

lib/spack/llnl/string.py

@@ -1,67 +0,0 @@
-# Copyright 2013-2023 Lawrence Livermore National Security, LLC and other
-# Spack Project Developers. See the top-level COPYRIGHT file for details.
-#
-# SPDX-License-Identifier: (Apache-2.0 OR MIT)
-"""String manipulation functions that do not have other dependencies than Python
-standard library
-"""
-from typing import List, Optional
-
-
-def comma_list(sequence: List[str], article: str = "") -> str:
-    if type(sequence) is not list:
-        sequence = list(sequence)
-
-    if not sequence:
-        return ""
-    if len(sequence) == 1:
-        return sequence[0]
-
-    out = ", ".join(str(s) for s in sequence[:-1])
-    if len(sequence) != 2:
-        out += ","  # oxford comma
-    out += " "
-    if article:
-        out += article + " "
-    out += str(sequence[-1])
-    return out
-
-
-def comma_or(sequence: List[str]) -> str:
-    """Return a string with all the elements of the input joined by comma, but the last
-    one (which is joined by 'or').
-    """
-    return comma_list(sequence, "or")
-
-
-def comma_and(sequence: List[str]) -> str:
-    """Return a string with all the elements of the input joined by comma, but the last
-    one (which is joined by 'and').
-    """
-    return comma_list(sequence, "and")
-
-
-def quote(sequence: List[str], q: str = "'") -> List[str]:
-    """Quotes each item in the input list with the quote character passed as second argument."""
-    return [f"{q}{e}{q}" for e in sequence]
-
-
-def plural(n: int, singular: str, plural: Optional[str] = None, show_n: bool = True) -> str:
-    """Pluralize <singular> word by adding an s if n != 1.
-
-    Arguments:
-        n: number of things there are
-        singular: singular form of word
-        plural: optional plural form, for when it's not just singular + 's'
-        show_n: whether to include n in the result string (default True)
-
-    Returns:
-        "1 thing" if n == 1 or "n things" if n != 1
-    """
-    number = f"{n} " if show_n else ""
-    if n == 1:
-        return f"{number}{singular}"
-    elif plural is not None:
-        return f"{number}{plural}"
-    else:
-        return f"{number}{singular}s"

lib/spack/llnl/url.py

@@ -1,459 +0,0 @@
-# Copyright 2013-2023 Lawrence Livermore National Security, LLC and other
-# Spack Project Developers. See the top-level COPYRIGHT file for details.
-#
-# SPDX-License-Identifier: (Apache-2.0 OR MIT)
-"""URL primitives that just require Python standard library."""
-import itertools
-import os.path
-import re
-from typing import Optional, Set, Tuple
-from urllib.parse import urlsplit, urlunsplit
-
-# Archive extensions allowed in Spack
-PREFIX_EXTENSIONS = ("tar", "TAR")
-EXTENSIONS = ("gz", "bz2", "xz", "Z")
-NO_TAR_EXTENSIONS = ("zip", "tgz", "tbz2", "tbz", "txz")
-
-# Add PREFIX_EXTENSIONS and EXTENSIONS last so that .tar.gz is matched *before* .tar or .gz
-ALLOWED_ARCHIVE_TYPES = (
-    tuple(".".join(ext) for ext in itertools.product(PREFIX_EXTENSIONS, EXTENSIONS))
-    + PREFIX_EXTENSIONS
-    + EXTENSIONS
-    + NO_TAR_EXTENSIONS
-)
-CONTRACTION_MAP = {"tgz": "tar.gz", "txz": "tar.xz", "tbz": "tar.bz2", "tbz2": "tar.bz2"}
-
-
-def find_list_urls(url: str) -> Set[str]:
-    r"""Find good list URLs for the supplied URL.
-
-    By default, returns the dirname of the archive path.
-
-    Provides special treatment for the following websites, which have a
-    unique list URL different from the dirname of the download URL:
-
-    =========  =======================================================
-    GitHub     https://github.com/<repo>/<name>/releases
-    GitLab     https://gitlab.\*/<repo>/<name>/tags
-    BitBucket  https://bitbucket.org/<repo>/<name>/downloads/?tab=tags
-    CRAN       https://\*.r-project.org/src/contrib/Archive/<name>
-    PyPI       https://pypi.org/simple/<name>/
-    LuaRocks   https://luarocks.org/modules/<repo>/<name>
-    =========  =======================================================
-
-    Note: this function is called by `spack versions`, `spack checksum`,
-    and `spack create`, but not by `spack fetch` or `spack install`.
-
-    Parameters:
-        url (str): The download URL for the package
-
-    Returns:
-        set: One or more list URLs for the package
-    """
-
-    url_types = [
-        # GitHub
-        # e.g. https://github.com/llnl/callpath/archive/v1.0.1.tar.gz
-        (r"(.*github\.com/[^/]+/[^/]+)", lambda m: m.group(1) + "/releases"),
-        # GitLab API endpoint
-        # e.g. https://gitlab.dkrz.de/api/v4/projects/k202009%2Flibaec/repository/archive.tar.gz?sha=v1.0.2
-        (
-            r"(.*gitlab[^/]+)/api/v4/projects/([^/]+)%2F([^/]+)",
-            lambda m: m.group(1) + "/" + m.group(2) + "/" + m.group(3) + "/tags",
-        ),
-        # GitLab non-API endpoint
-        # e.g. https://gitlab.dkrz.de/k202009/libaec/uploads/631e85bcf877c2dcaca9b2e6d6526339/libaec-1.0.0.tar.gz
-        (r"(.*gitlab[^/]+/(?!api/v4/projects)[^/]+/[^/]+)", lambda m: m.group(1) + "/tags"),
-        # BitBucket
-        # e.g. https://bitbucket.org/eigen/eigen/get/3.3.3.tar.bz2
-        (r"(.*bitbucket.org/[^/]+/[^/]+)", lambda m: m.group(1) + "/downloads/?tab=tags"),
-        # CRAN
-        # e.g. https://cran.r-project.org/src/contrib/Rcpp_0.12.9.tar.gz
-        # e.g. https://cloud.r-project.org/src/contrib/rgl_0.98.1.tar.gz
-        (
-            r"(.*\.r-project\.org/src/contrib)/([^_]+)",
-            lambda m: m.group(1) + "/Archive/" + m.group(2),
-        ),
-        # PyPI
-        # e.g. https://pypi.io/packages/source/n/numpy/numpy-1.19.4.zip
-        # e.g. https://www.pypi.io/packages/source/n/numpy/numpy-1.19.4.zip
-        # e.g. https://pypi.org/packages/source/n/numpy/numpy-1.19.4.zip
-        # e.g. https://pypi.python.org/packages/source/n/numpy/numpy-1.19.4.zip
-        # e.g. https://files.pythonhosted.org/packages/source/n/numpy/numpy-1.19.4.zip
-        # e.g. https://pypi.io/packages/py2.py3/o/opencensus-context/opencensus_context-0.1.1-py2.py3-none-any.whl
-        (
-            r"(?:pypi|pythonhosted)[^/]+/packages/[^/]+/./([^/]+)",
-            lambda m: "https://pypi.org/simple/" + m.group(1) + "/",
-        ),
-        # LuaRocks
-        # e.g. https://luarocks.org/manifests/gvvaughan/lpeg-1.0.2-1.src.rock
-        # e.g. https://luarocks.org/manifests/openresty/lua-cjson-2.1.0-1.src.rock
-        (
-            r"luarocks[^/]+/(?:modules|manifests)/(?P<org>[^/]+)/"
-            + r"(?P<name>.+?)-[0-9.-]*\.src\.rock",
-            lambda m: "https://luarocks.org/modules/"
-            + m.group("org")
-            + "/"
-            + m.group("name")
-            + "/",
-        ),
-    ]
-
-    list_urls = {os.path.dirname(url)}
-
-    for pattern, fun in url_types:
-        match = re.search(pattern, url)
-        if match:
-            list_urls.add(fun(match))
-
-    return list_urls
-
-
-def strip_query_and_fragment(url: str) -> Tuple[str, str]:
-    """Strips query and fragment from a url, then returns the base url and the suffix.
-
-    Args:
-        url: URL to be stripped
-
-    Raises:
-        ValueError: when there is any error parsing the URL
-    """
-    components = urlsplit(url)
-    stripped = components[:3] + (None, None)
-
-    query, frag = components[3:5]
-    suffix = ""
-    if query:
-        suffix += "?" + query
-    if frag:
-        suffix += "#" + frag
-
-    return urlunsplit(stripped), suffix
-
-
-SOURCEFORGE_RE = re.compile(r"(.*(?:sourceforge\.net|sf\.net)/.*)(/download)$")
-
-
-def split_url_on_sourceforge_suffix(url: str) -> Tuple[str, ...]:
-    """If the input is a sourceforge URL, returns base URL and "/download" suffix. Otherwise,
-    returns the input URL and an empty string.
-    """
-    match = SOURCEFORGE_RE.search(url)
-    if match is not None:
-        return match.groups()
-    return url, ""
-
-
-def has_extension(path_or_url: str, ext: str) -> bool:
-    """Returns true if the extension in input is present in path, false otherwise."""
-    prefix, _ = split_url_on_sourceforge_suffix(path_or_url)
-    if not ext.startswith(r"\."):
-        ext = rf"\.{ext}$"
-
-    if re.search(ext, prefix):
-        return True
-    return False
-
-
-def extension_from_path(path_or_url: Optional[str]) -> Optional[str]:
-    """Tries to match an allowed archive extension to the input. Returns the first match,
-    or None if no match was found.
-
-    Raises:
-        ValueError: if the input is None
-    """
-    if path_or_url is None:
-        raise ValueError("Can't call extension() on None")
-
-    for t in ALLOWED_ARCHIVE_TYPES:
-        if has_extension(path_or_url, t):
-            return t
-    return None
-
-
-def remove_extension(path_or_url: str, *, extension: str) -> str:
-    """Returns the input with the extension removed"""
-    suffix = rf"\.{extension}$"
-    return re.sub(suffix, "", path_or_url)
-
-
-def check_and_remove_ext(path: str, *, extension: str) -> str:
-    """Returns the input path with the extension removed, if the extension is present in path.
-    Otherwise, returns the input unchanged.
-    """
-    if not has_extension(path, extension):
-        return path
-    path, _ = split_url_on_sourceforge_suffix(path)
-    return remove_extension(path, extension=extension)
-
-
-def strip_extension(path_or_url: str, *, extension: Optional[str] = None) -> str:
-    """If a path contains the extension in input, returns the path stripped of the extension.
-    Otherwise, returns the input path.
-
-    If extension is None, attempts to strip any allowed extension from path.
-    """
-    if extension is None:
-        for t in ALLOWED_ARCHIVE_TYPES:
-            if has_extension(path_or_url, ext=t):
-                extension = t
-                break
-        else:
-            return path_or_url
-
-    return check_and_remove_ext(path_or_url, extension=extension)
-
-
-def split_url_extension(url: str) -> Tuple[str, ...]:
-    """Some URLs have a query string, e.g.:
-
-    1. https://github.com/losalamos/CLAMR/blob/packages/PowerParser_v2.0.7.tgz?raw=true
-    2. http://www.apache.org/dyn/closer.cgi?path=/cassandra/1.2.0/apache-cassandra-1.2.0-rc2-bin.tar.gz
-    3. https://gitlab.kitware.com/vtk/vtk/repository/archive.tar.bz2?ref=v7.0.0
-
-    In (1), the query string needs to be stripped to get at the
-    extension, but in (2) & (3), the filename is IN a single final query
-    argument.
-
-    This strips the URL into three pieces: ``prefix``, ``ext``, and ``suffix``.
-    The suffix contains anything that was stripped off the URL to
-    get at the file extension.  In (1), it will be ``'?raw=true'``, but
-    in (2), it will be empty. In (3) the suffix is a parameter that follows
-    after the file extension, e.g.:
-
-    1. ``('https://github.com/losalamos/CLAMR/blob/packages/PowerParser_v2.0.7', '.tgz', '?raw=true')``
-    2. ``('http://www.apache.org/dyn/closer.cgi?path=/cassandra/1.2.0/apache-cassandra-1.2.0-rc2-bin', '.tar.gz', None)``
-    3. ``('https://gitlab.kitware.com/vtk/vtk/repository/archive', '.tar.bz2', '?ref=v7.0.0')``
-    """
-    # Strip off sourceforge download suffix.
-    # e.g. https://sourceforge.net/projects/glew/files/glew/2.0.0/glew-2.0.0.tgz/download
-    prefix, suffix = split_url_on_sourceforge_suffix(url)
-
-    ext = extension_from_path(prefix)
-    if ext is not None:
-        prefix = strip_extension(prefix)
-        return prefix, ext, suffix
-
-    try:
-        prefix, suf = strip_query_and_fragment(prefix)
-    except ValueError:
-        # FIXME: tty.debug("Got error parsing path %s" % path)
-        # Ignore URL parse errors here
-        return url, ""
-
-    ext = extension_from_path(prefix)
-    prefix = strip_extension(prefix)
-    suffix = suf + suffix
-    if ext is None:
-        ext = ""
-
-    return prefix, ext, suffix
-
-
-def strip_version_suffixes(path_or_url: str) -> str:
-    """Some tarballs contain extraneous information after the version:
-
-    * ``bowtie2-2.2.5-source``
-    * ``libevent-2.0.21-stable``
-    * ``cuda_8.0.44_linux.run``
-
-    These strings are not part of the version number and should be ignored.
-    This function strips those suffixes off and returns the remaining string.
-    The goal is that the version is always the last thing in ``path``:
-
-    * ``bowtie2-2.2.5``
-    * ``libevent-2.0.21``
-    * ``cuda_8.0.44``
-
-    Args:
-        path_or_url: The filename or URL for the package
-
-    Returns:
-        The ``path`` with any extraneous suffixes removed
-    """
-    # NOTE: This could be done with complicated regexes in parse_version_offset
-    # NOTE: The problem is that we would have to add these regexes to the end
-    # NOTE: of every single version regex. Easier to just strip them off
-    # NOTE: permanently
-
-    suffix_regexes = [
-        # Download type
-        r"[Ii]nstall",
-        r"all",
-        r"code",
-        r"[Ss]ources?",
-        r"file",
-        r"full",
-        r"single",
-        r"with[a-zA-Z_-]+",
-        r"rock",
-        r"src(_0)?",
-        r"public",
-        r"bin",
-        r"binary",
-        r"run",
-        r"[Uu]niversal",
-        r"jar",
-        r"complete",
-        r"dynamic",
-        r"oss",
-        r"gem",
-        r"tar",
-        r"sh",
-        # Download version
-        r"release",
-        r"bin",
-        r"stable",
-        r"[Ff]inal",
-        r"rel",
-        r"orig",
-        r"dist",
-        r"\+",
-        # License
-        r"gpl",
-        # Arch
-        # Needs to come before and after OS, appears in both orders
-        r"ia32",
-        r"intel",
-        r"amd64",
-        r"linux64",
-        r"x64",
-        r"64bit",
-        r"x86[_-]64",
-        r"i586_64",
-        r"x86",
-        r"i[36]86",
-        r"ppc64(le)?",
-        r"armv?(7l|6l|64)",
-        # Other
-        r"cpp",
-        r"gtk",
-        r"incubating",
-        # OS
-        r"[Ll]inux(_64)?",
-        r"LINUX",
-        r"[Uu]ni?x",
-        r"[Ss]un[Oo][Ss]",
-        r"[Mm]ac[Oo][Ss][Xx]?",
-        r"[Oo][Ss][Xx]",
-        r"[Dd]arwin(64)?",
-        r"[Aa]pple",
-        r"[Ww]indows",
-        r"[Ww]in(64|32)?",
-        r"[Cc]ygwin(64|32)?",
-        r"[Mm]ingw",
-        r"centos",
-        # Arch
-        # Needs to come before and after OS, appears in both orders
-        r"ia32",
-        r"intel",
-        r"amd64",
-        r"linux64",
-        r"x64",
-        r"64bit",
-        r"x86[_-]64",
-        r"i586_64",
-        r"x86",
-        r"i[36]86",
-        r"ppc64(le)?",
-        r"armv?(7l|6l|64)?",
-        # PyPI
-        r"[._-]py[23].*\.whl",
-        r"[._-]cp[23].*\.whl",
-        r"[._-]win.*\.exe",
-    ]
-
-    for regex in suffix_regexes:
-        # Remove the suffix from the end of the path
-        # This may be done multiple times
-        path_or_url = re.sub(r"[._-]?" + regex + "$", "", path_or_url)
-
-    return path_or_url
-
-
-def expand_contracted_extension(extension: str) -> str:
-    """Returns the expanded version of a known contracted extension.
-
-    This function maps extensions like ".tgz" to ".tar.gz". On unknown extensions,
-    return the input unmodified.
-    """
-    extension = extension.strip(".")
-    return CONTRACTION_MAP.get(extension, extension)
-
-
-def expand_contracted_extension_in_path(
-    path_or_url: str, *, extension: Optional[str] = None
-) -> str:
-    """Returns the input path or URL with any contraction extension expanded.
-
-    Args:
-        path_or_url: path or URL to be expanded
-        extension: if specified, only attempt to expand that extension
-    """
-    extension = extension or extension_from_path(path_or_url)
-    if extension is None:
-        return path_or_url
-
-    expanded = expand_contracted_extension(extension)
-    if expanded != extension:
-        return re.sub(rf"{extension}", rf"{expanded}", path_or_url)
-    return path_or_url
-
-
-def compression_ext_from_compressed_archive(extension: str) -> Optional[str]:
-    """Returns compression extension for a compressed archive"""
-    extension = expand_contracted_extension(extension)
-    for ext in [*EXTENSIONS]:
-        if ext in extension:
-            return ext
-    return None
-
-
-def strip_compression_extension(path_or_url: str, ext: Optional[str] = None) -> str:
-    """Strips the compression extension from the input, and returns it. For instance,
-    "foo.tgz" becomes "foo.tar".
-
-    If no extension is given, try a default list of extensions.
-
-    Args:
-        path_or_url: input to be stripped
-        ext: if given, extension to be stripped
-    """
-    if not extension_from_path(path_or_url):
-        return path_or_url
-
-    expanded_path = expand_contracted_extension_in_path(path_or_url)
-    candidates = [ext] if ext is not None else EXTENSIONS
-    for current_extension in candidates:
-        modified_path = check_and_remove_ext(expanded_path, extension=current_extension)
-        if modified_path != expanded_path:
-            return modified_path
-    return expanded_path
-
-
-def allowed_archive(path_or_url: str) -> bool:
-    """Returns true if the input is a valid archive, False otherwise."""
-    return (
-        False if not path_or_url else any(path_or_url.endswith(t) for t in ALLOWED_ARCHIVE_TYPES)
-    )
-
-
-def determine_url_file_extension(path: str) -> str:
-    """This returns the type of archive a URL refers to.  This is
-    sometimes confusing because of URLs like:
-
-    (1) https://github.com/petdance/ack/tarball/1.93_02
-
-    Where the URL doesn't actually contain the filename.  We need
-    to know what type it is so that we can appropriately name files
-    in mirrors.
-    """
-    match = re.search(r"github.com/.+/(zip|tar)ball/", path)
-    if match:
-        if match.group(1) == "zip":
-            return "zip"
-        elif match.group(1) == "tar":
-            return "tar.gz"
-
-    prefix, ext, suffix = split_url_extension(path)
-    return ext

lib/spack/llnl/util/argparsewriter.py

@@ -3,42 +3,33 @@
 #
 # SPDX-License-Identifier: (Apache-2.0 OR MIT)
 
-import abc
+from __future__ import print_function
+
 import argparse
+import errno
 import io
 import re
 import sys
-from argparse import ArgumentParser
-from typing import IO, Any, Iterable, List, Optional, Sequence, Tuple, Union
 
 
-class Command:
+class Command(object):
     """Parsed representation of a command from argparse.
 
-    This is a single command from an argparse parser. ``ArgparseWriter`` creates these and returns
+    This is a single command from an argparse parser. ``ArgparseWriter``
-    them from ``parse()``, and it passes one of these to each call to ``format()`` so that we can
+    creates these and returns them from ``parse()``, and it passes one of
-    take an action for a single command.
+    these to each call to ``format()`` so that we can take an action for
+    a single command.
+
+    Parts of a Command:
+      - prog: command name (str)
+      - description: command description (str)
+      - usage: command usage (str)
+      - positionals: list of positional arguments (list)
+      - optionals: list of optional arguments (list)
+      - subcommands: list of subcommand parsers (list)
     """
 
-    def __init__(
+    def __init__(self, prog, description, usage, positionals, optionals, subcommands):
-        self,
-        prog: str,
-        description: Optional[str],
-        usage: str,
-        positionals: List[Tuple[str, Optional[Iterable[Any]], Union[int, str, None], str]],
-        optionals: List[Tuple[Sequence[str], List[str], str, Union[int, str, None], str]],
-        subcommands: List[Tuple[ArgumentParser, str, str]],
-    ) -> None:
-        """Initialize a new Command instance.
-
-        Args:
-            prog: Program name.
-            description: Command description.
-            usage: Command usage.
-            positionals: List of positional arguments.
-            optionals: List of optional arguments.
-            subcommands: List of subcommand parsers.
-        """
         self.prog = prog
         self.description = description
         self.usage = usage
@@ -47,34 +38,35 @@ def __init__(
         self.subcommands = subcommands
 
 
-# NOTE: The only reason we subclass argparse.HelpFormatter is to get access to self._expand_help(),
+# NOTE: The only reason we subclass argparse.HelpFormatter is to get access
-# ArgparseWriter is not intended to be used as a formatter_class.
+# to self._expand_help(), ArgparseWriter is not intended to be used as a
-class ArgparseWriter(argparse.HelpFormatter, abc.ABC):
+# formatter_class.
-    """Analyze an argparse ArgumentParser for easy generation of help."""
+class ArgparseWriter(argparse.HelpFormatter):
+    """Analyzes an argparse ArgumentParser for easy generation of help."""
 
-    def __init__(self, prog: str, out: IO = sys.stdout, aliases: bool = False) -> None:
+    def __init__(self, prog, out=None, aliases=False):
-        """Initialize a new ArgparseWriter instance.
+        """Initializes a new ArgparseWriter instance.
 
-        Args:
+        Parameters:
-            prog: Program name.
+            prog (str): the program name
-            out: File object to write to.
+            out (file object): the file to write to (default sys.stdout)
-            aliases: Whether or not to include subparsers for aliases.
+            aliases (bool): whether or not to include subparsers for aliases
         """
-        super().__init__(prog)
+        super(ArgparseWriter, self).__init__(prog)
         self.level = 0
         self.prog = prog
-        self.out = out
+        self.out = sys.stdout if out is None else out
         self.aliases = aliases
 
-    def parse(self, parser: ArgumentParser, prog: str) -> Command:
+    def parse(self, parser, prog):
-        """Parse the parser object and return the relavent components.
+        """Parses the parser object and returns the relavent components.
 
-        Args:
+        Parameters:
-            parser: Command parser.
+            parser (argparse.ArgumentParser): the parser
-            prog: Program name.
+            prog (str): the command name
 
         Returns:
-            Information about the command from the parser.
+            (Command) information about the command from the parser
         """
         self.parser = parser
 
@@ -88,7 +80,8 @@ def parse(self, parser: ArgumentParser, prog: str) -> Command:
         groups = parser._mutually_exclusive_groups
         usage = fmt._format_usage(None, actions, groups, "").strip()
 
-        # Go through actions and split them into optionals, positionals, and subcommands
+        # Go through actions and split them into optionals, positionals,
+        # and subcommands
         optionals = []
         positionals = []
         subcommands = []
@@ -96,97 +89,74 @@ def parse(self, parser: ArgumentParser, prog: str) -> Command:
             if action.option_strings:
                 flags = action.option_strings
                 dest_flags = fmt._format_action_invocation(action)
-                nargs = action.nargs
+                help = self._expand_help(action) if action.help else ""
-                help = (
+                help = help.replace("\n", " ")
-                    self._expand_help(action)
+                optionals.append((flags, dest_flags, help))
-                    if action.help and action.help != argparse.SUPPRESS
-                    else ""
-                )
-                help = help.split("\n")[0]
-
-                if action.choices is not None:
-                    dest = [str(choice) for choice in action.choices]
-                else:
-                    dest = [action.dest]
-
-                optionals.append((flags, dest, dest_flags, nargs, help))
             elif isinstance(action, argparse._SubParsersAction):
                 for subaction in action._choices_actions:
                     subparser = action._name_parser_map[subaction.dest]
-                    help = (
+                    subcommands.append((subparser, subaction.dest))
-                        self._expand_help(subaction)
-                        if subaction.help and action.help != argparse.SUPPRESS
-                        else ""
-                    )
-                    help = help.split("\n")[0]
-                    subcommands.append((subparser, subaction.dest, help))
 
                     # Look for aliases of the form 'name (alias, ...)'
-                    if self.aliases and isinstance(subaction.metavar, str):
+                    if self.aliases:
                         match = re.match(r"(.*) \((.*)\)", subaction.metavar)
                         if match:
                             aliases = match.group(2).split(", ")
                             for alias in aliases:
                                 subparser = action._name_parser_map[alias]
-                                help = (
+                                subcommands.append((subparser, alias))
-                                    self._expand_help(subaction)
-                                    if subaction.help and action.help != argparse.SUPPRESS
-                                    else ""
-                                )
-                                help = help.split("\n")[0]
-                                subcommands.append((subparser, alias, help))
             else:
                 args = fmt._format_action_invocation(action)
-                help = (
+                help = self._expand_help(action) if action.help else ""
-                    self._expand_help(action)
+                help = help.replace("\n", " ")
-                    if action.help and action.help != argparse.SUPPRESS
+                positionals.append((args, help))
-                    else ""
-                )
-                help = help.split("\n")[0]
-                positionals.append((args, action.choices, action.nargs, help))
 
         return Command(prog, description, usage, positionals, optionals, subcommands)
 
-    @abc.abstractmethod
+    def format(self, cmd):
-    def format(self, cmd: Command) -> str:
+        """Returns the string representation of a single node in the
-        """Return the string representation of a single node in the parser tree.
+        parser tree.
 
-        Override this in subclasses to define how each subcommand should be displayed.
+        Override this in subclasses to define how each subcommand
+        should be displayed.
 
-        Args:
+        Parameters:
-            cmd: Parsed information about a command or subcommand.
+            (Command): parsed information about a command or subcommand
 
         Returns:
-            String representation of this subcommand.
+            str: the string representation of this subcommand
         """
+        raise NotImplementedError
 
-    def _write(self, parser: ArgumentParser, prog: str, level: int = 0) -> None:
+    def _write(self, parser, prog, level=0):
-        """Recursively write a parser.
+        """Recursively writes a parser.
 
-        Args:
+        Parameters:
-            parser: Command parser.
+            parser (argparse.ArgumentParser): the parser
-            prog: Program name.
+            prog (str): the command name
-            level: Current level.
+            level (int): the current level
         """
         self.level = level
 
         cmd = self.parse(parser, prog)
         self.out.write(self.format(cmd))
 
-        for subparser, prog, help in cmd.subcommands:
+        for subparser, prog in cmd.subcommands:
             self._write(subparser, prog, level=level + 1)
 
-    def write(self, parser: ArgumentParser) -> None:
+    def write(self, parser):
         """Write out details about an ArgumentParser.
 
         Args:
-            parser: Command parser.
+            parser (argparse.ArgumentParser): the parser
         """
         try:
             self._write(parser, self.prog)
-        except BrokenPipeError:
+        except IOError as e:
             # Swallow pipe errors
-            pass
+            # Raises IOError in Python 2 and BrokenPipeError in Python 3
+            if e.errno != errno.EPIPE:
+                raise
 
 
 _rst_levels = ["=", "-", "^", "~", ":", "`"]
@@ -195,33 +165,21 @@ def write(self, parser: ArgumentParser) -> None:
 class ArgparseRstWriter(ArgparseWriter):
     """Write argparse output as rst sections."""
 
-    def __init__(
+    def __init__(self, prog, out=None, aliases=False, rst_levels=_rst_levels):
-        self,
+        """Create a new ArgparseRstWriter.
-        prog: str,
-        out: IO = sys.stdout,
-        aliases: bool = False,
-        rst_levels: Sequence[str] = _rst_levels,
-    ) -> None:
-        """Initialize a new ArgparseRstWriter instance.
 
-        Args:
+        Parameters:
-            prog: Program name.
+            prog (str): program name
-            out: File object to write to.
+            out (file object): file to write to
-            aliases: Whether or not to include subparsers for aliases.
+            aliases (bool): whether or not to include subparsers for aliases
-            rst_levels: List of characters for rst section headings.
+            rst_levels (list of str): list of characters
+                for rst section headings
         """
-        super().__init__(prog, out, aliases)
+        out = sys.stdout if out is None else out
+        super(ArgparseRstWriter, self).__init__(prog, out, aliases)
         self.rst_levels = rst_levels
 
-    def format(self, cmd: Command) -> str:
+    def format(self, cmd):
-        """Return the string representation of a single node in the parser tree.
-
-        Args:
-            cmd: Parsed information about a command or subcommand.
-
-        Returns:
-            String representation of a node.
-        """
         string = io.StringIO()
         string.write(self.begin_command(cmd.prog))
 
@@ -232,13 +190,13 @@ def format(self, cmd: Command) -> str:
 
         if cmd.positionals:
             string.write(self.begin_positionals())
-            for args, choices, nargs, help in cmd.positionals:
+            for args, help in cmd.positionals:
                 string.write(self.positional(args, help))
             string.write(self.end_positionals())
 
         if cmd.optionals:
             string.write(self.begin_optionals())
-            for flags, dest, dest_flags, nargs, help in cmd.optionals:
+            for flags, dest_flags, help in cmd.optionals:
                 string.write(self.optional(dest_flags, help))
             string.write(self.end_optionals())
 
@@ -247,15 +205,7 @@ def format(self, cmd: Command) -> str:
 
         return string.getvalue()
 
-    def begin_command(self, prog: str) -> str:
+    def begin_command(self, prog):
-        """Text to print before a command.
-
-        Args:
-            prog: Program name.
-
-        Returns:
-            Text before a command.
-        """
         return """
 ----
 
@@ -268,26 +218,10 @@ def begin_command(self, prog: str) -> str:
             prog.replace(" ", "-"), prog, self.rst_levels[self.level] * len(prog)
         )
 
-    def description(self, description: str) -> str:
+    def description(self, description):
-        """Description of a command.
-
-        Args:
-            description: Command description.
-
-        Returns:
-            Description of a command.
-        """
         return description + "\n\n"
 
-    def usage(self, usage: str) -> str:
+    def usage(self, usage):
-        """Example usage of a command.
-
-        Args:
-            usage: Command usage.
-
-        Returns:
-            Usage of a command.
-        """
         return """\
 .. code-block:: console
 
@@ -297,24 +231,10 @@ def usage(self, usage: str) -> str:
             usage
         )
 
-    def begin_positionals(self) -> str:
+    def begin_positionals(self):
-        """Text to print before positional arguments.
-
-        Returns:
-            Positional arguments header.
-        """
         return "\n**Positional arguments**\n\n"
 
-    def positional(self, name: str, help: str) -> str:
+    def positional(self, name, help):
-        """Description of a positional argument.
-
-        Args:
-            name: Argument name.
-            help: Help text.
-
-        Returns:
-            Positional argument description.
-        """
         return """\
 {0}
   {1}
@@ -323,32 +243,13 @@ def positional(self, name: str, help: str) -> str:
             name, help
         )
 
-    def end_positionals(self) -> str:
+    def end_positionals(self):
-        """Text to print after positional arguments.
-
-        Returns:
-            Positional arguments footer.
-        """
         return ""
 
-    def begin_optionals(self) -> str:
+    def begin_optionals(self):
-        """Text to print before optional arguments.
-
-        Returns:
-            Optional arguments header.
-        """
         return "\n**Optional arguments**\n\n"
 
-    def optional(self, opts: str, help: str) -> str:
+    def optional(self, opts, help):
-        """Description of an optional argument.
-
-        Args:
-            opts: Optional argument.
-            help: Help text.
-
-        Returns:
-            Optional argument description.
-        """
         return """\
 ``{0}``
   {1}
@@ -357,23 +258,10 @@ def optional(self, opts: str, help: str) -> str:
             opts, help
         )
 
-    def end_optionals(self) -> str:
+    def end_optionals(self):
-        """Text to print after optional arguments.
-
-        Returns:
-            Optional arguments footer.
-        """
         return ""
 
-    def begin_subcommands(self, subcommands: List[Tuple[ArgumentParser, str, str]]) -> str:
+    def begin_subcommands(self, subcommands):
-        """Table with links to other subcommands.
-
-        Arguments:
-            subcommands: List of subcommands.
-
-        Returns:
-            Subcommand linking text.
-        """
         string = """
 **Subcommands**
 
@@ -382,8 +270,116 @@ def begin_subcommands(self, subcommands: List[Tuple[ArgumentParser, str, str]])
 
 """
 
-        for cmd, _, _ in subcommands:
+        for cmd, _ in subcommands:
             prog = re.sub(r"^[^ ]* ", "", cmd.prog)
             string += "   * :ref:`{0} <{1}>`\n".format(prog, cmd.prog.replace(" ", "-"))
 
         return string + "\n"
+
+
+class ArgparseCompletionWriter(ArgparseWriter):
+    """Write argparse output as shell programmable tab completion functions."""
+
+    def format(self, cmd):
+        """Returns the string representation of a single node in the
+        parser tree.
+
+        Override this in subclasses to define how each subcommand
+        should be displayed.
+
+        Parameters:
+            (Command): parsed information about a command or subcommand
+
+        Returns:
+            str: the string representation of this subcommand
+        """
+
+        assert cmd.optionals  # we should always at least have -h, --help
+        assert not (cmd.positionals and cmd.subcommands)  # one or the other
+
+        # We only care about the arguments/flags, not the help messages
+        positionals = []
+        if cmd.positionals:
+            positionals, _ = zip(*cmd.positionals)
+        optionals, _, _ = zip(*cmd.optionals)
+        subcommands = []
+        if cmd.subcommands:
+            _, subcommands = zip(*cmd.subcommands)
+
+        # Flatten lists of lists
+        optionals = [x for xx in optionals for x in xx]
+
+        return (
+            self.start_function(cmd.prog)
+            + self.body(positionals, optionals, subcommands)
+            + self.end_function(cmd.prog)
+        )
+
+    def start_function(self, prog):
+        """Returns the syntax needed to begin a function definition.
+
+        Parameters:
+            prog (str): the command name
+
+        Returns:
+            str: the function definition beginning
+        """
+        name = prog.replace("-", "_").replace(" ", "_")
+        return "\n_{0}() {{".format(name)
+
+    def end_function(self, prog=None):
+        """Returns the syntax needed to end a function definition.
+
+        Parameters:
+            prog (str or None): the command name
+
+        Returns:
+            str: the function definition ending
+        """
+        return "}\n"
+
+    def body(self, positionals, optionals, subcommands):
+        """Returns the body of the function.
+
+        Parameters:
+            positionals (list): list of positional arguments
+            optionals (list): list of optional arguments
+            subcommands (list): list of subcommand parsers
+
+        Returns:
+            str: the function body
+        """
+        return ""
+
+    def positionals(self, positionals):
+        """Returns the syntax for reporting positional arguments.
+
+        Parameters:
+            positionals (list): list of positional arguments
+
+        Returns:
+            str: the syntax for positional arguments
+        """
+        return ""
+
+    def optionals(self, optionals):
+        """Returns the syntax for reporting optional flags.
+
+        Parameters:
+            optionals (list): list of optional arguments
+
+        Returns:
+            str: the syntax for optional flags
+        """
+        return ""
+
+    def subcommands(self, subcommands):
+        """Returns the syntax for reporting subcommands.
+
+        Parameters:
+            subcommands (list): list of subcommand parsers
+
+        Returns:
+            str: the syntax for subcommand parsers
+        """
+        return ""

lib/spack/llnl/util/filesystem.py

@@ -11,7 +11,6 @@
 import itertools
 import numbers
 import os
-import pathlib
 import posixpath
 import re
 import shutil
@@ -19,17 +18,14 @@
 import sys
 import tempfile
 from contextlib import contextmanager
-from itertools import accumulate
 from typing import Callable, Iterable, List, Match, Optional, Tuple, Union
 
-import llnl.util.symlink
 from llnl.util import tty
 from llnl.util.lang import dedupe, memoized
-from llnl.util.symlink import islink, readlink, resolve_link_target_relative_to_the_link, symlink
+from llnl.util.symlink import islink, symlink
 
 from spack.util.executable import Executable, which
-
+from spack.util.path import path_to_os_path, system_path_filter
-from ..path import path_to_os_path, system_path_filter
 
 if sys.platform != "win32":
     import grp
@@ -105,7 +101,7 @@ def _nop(args, ns=None, follow_symlinks=None):
             pass
 
         # follow symlinks (aka don't not follow symlinks)
-        follow = follow_symlinks or not (islink(src) and islink(dst))
+        follow = follow_symlinks or not (os.path.islink(src) and os.path.islink(dst))
         if follow:
             # use the real function if it exists
             def lookup(name):
@@ -156,37 +152,6 @@ def lookup(name):
     shutil.copystat = copystat
 
 
-def polite_path(components: Iterable[str]):
-    """
-    Given a list of strings which are intended to be path components,
-    generate a path, and format each component to avoid generating extra
-    path entries.
-
-    For example all "/", "\", and ":" characters will be replaced with
-    "_". Other characters like "=" will also be replaced.
-    """
-    return os.path.join(*[polite_filename(x) for x in components])
-
-
-@memoized
-def _polite_antipattern():
-    # A regex of all the characters we don't want in a filename
-    return re.compile(r"[^A-Za-z0-9_.-]")
-
-
-def polite_filename(filename: str) -> str:
-    """
-    Replace generally problematic filename characters with underscores.
-
-    This differs from sanitize_filename in that it is more aggressive in
-    changing characters in the name. For example it removes "=" which can
-    confuse path parsing in external tools.
-    """
-    # This character set applies for both Windows and Linux. It does not
-    # account for reserved filenames in Windows.
-    return _polite_antipattern().sub("_", filename)
-
-
 def getuid():
     if sys.platform == "win32":
         import ctypes
@@ -204,7 +169,7 @@ def rename(src, dst):
     if sys.platform == "win32":
         # Windows path existence checks will sometimes fail on junctions/links/symlinks
         # so check for that case
-        if os.path.exists(dst) or islink(dst):
+        if os.path.exists(dst) or os.path.islink(dst):
             os.remove(dst)
     os.rename(src, dst)
 
@@ -368,7 +333,8 @@ def groupid_to_group(x):
 
     if string:
         regex = re.escape(regex)
-    for filename in path_to_os_path(*filenames):
+    filenames = path_to_os_path(*filenames)
+    for filename in filenames:
         msg = 'FILTER FILE: {0} [replacing "{1}"]'
         tty.debug(msg.format(filename, regex))
 
@@ -436,7 +402,7 @@ def groupid_to_group(x):
                 os.remove(backup_filename)
 
 
-class FileFilter:
+class FileFilter(object):
     """Convenience class for calling ``filter_file`` a lot."""
 
     def __init__(self, *filenames):
@@ -600,7 +566,7 @@ def set_install_permissions(path):
     # If this points to a file maintained in a Spack prefix, it is assumed that
     # this function will be invoked on the target. If the file is outside a
     # Spack-maintained prefix, the permissions should not be modified.
-    if islink(path):
+    if os.path.islink(path):
         return
     if os.path.isdir(path):
         os.chmod(path, 0o755)
@@ -644,8 +610,6 @@ def chgrp(path, group, follow_symlinks=True):
         gid = grp.getgrnam(group).gr_gid
     else:
         gid = group
-    if os.stat(path).st_gid == gid:
-        return
     if follow_symlinks:
         os.chown(path, -1, gid)
     else:
@@ -669,7 +633,7 @@ def chmod_x(entry, perms):
 @system_path_filter
 def copy_mode(src, dest):
     """Set the mode of dest to that of src unless it is a link."""
-    if islink(dest):
+    if os.path.islink(dest):
         return
     src_mode = os.stat(src).st_mode
     dest_mode = os.stat(dest).st_mode
@@ -755,12 +719,26 @@ def install(src, dest):
     copy(src, dest, _permissions=True)
 
 
+@system_path_filter
+def resolve_link_target_relative_to_the_link(link):
+    """
+    os.path.isdir uses os.path.exists, which for links will check
+    the existence of the link target. If the link target is relative to
+    the link, we need to construct a pathname that is valid from
+    our cwd (which may not be the same as the link's directory)
+    """
+    target = os.readlink(link)
+    if os.path.isabs(target):
+        return target
+    link_dir = os.path.dirname(os.path.abspath(link))
+    return os.path.join(link_dir, target)
+
+
 @system_path_filter
 def copy_tree(
     src: str,
     dest: str,
     symlinks: bool = True,
-    allow_broken_symlinks: bool = sys.platform != "win32",
     ignore: Optional[Callable[[str], bool]] = None,
     _permissions: bool = False,
 ):
@@ -783,8 +761,6 @@ def copy_tree(
         src (str): the directory to copy
         dest (str): the destination directory
         symlinks (bool): whether or not to preserve symlinks
-        allow_broken_symlinks (bool): whether or not to allow broken (dangling) symlinks,
-            On Windows, setting this to True will raise an exception. Defaults to true on unix.
         ignore (typing.Callable): function indicating which files to ignore
         _permissions (bool): for internal use only
 
@@ -792,8 +768,6 @@ def copy_tree(
         IOError: if *src* does not match any files or directories
         ValueError: if *src* is a parent directory of *dest*
     """
-    if allow_broken_symlinks and sys.platform == "win32":
-        raise llnl.util.symlink.SymlinkError("Cannot allow broken symlinks on Windows!")
     if _permissions:
         tty.debug("Installing {0} to {1}".format(src, dest))
     else:
@@ -807,11 +781,6 @@ def copy_tree(
     if not files:
         raise IOError("No such file or directory: '{0}'".format(src))
 
-    # For Windows hard-links and junctions, the source path must exist to make a symlink. Add
-    # all symlinks to this list while traversing the tree, then when finished, make all
-    # symlinks at the end.
-    links = []
-
     for src in files:
         abs_src = os.path.abspath(src)
         if not abs_src.endswith(os.path.sep):
@@ -834,7 +803,7 @@ def copy_tree(
             ignore=ignore,
             follow_nonexisting=True,
         ):
-            if islink(s):
+            if os.path.islink(s):
                 link_target = resolve_link_target_relative_to_the_link(s)
                 if symlinks:
                     target = os.readlink(s)
@@ -848,9 +817,7 @@ def escaped_path(path):
                             tty.debug("Redirecting link {0} to {1}".format(target, new_target))
                             target = new_target
 
-                    links.append((target, d, s))
+                    symlink(target, d)
-                    continue
-
                 elif os.path.isdir(link_target):
                     mkdirp(d)
                 else:
@@ -865,17 +832,9 @@ def escaped_path(path):
                 set_install_permissions(d)
                 copy_mode(s, d)
 
-    for target, d, s in links:
-        symlink(target, d, allow_broken_symlinks=allow_broken_symlinks)
-        if _permissions:
-            set_install_permissions(d)
-            copy_mode(s, d)
-
 
 @system_path_filter
-def install_tree(
+def install_tree(src, dest, symlinks=True, ignore=None):
-    src, dest, symlinks=True, ignore=None, allow_broken_symlinks=sys.platform != "win32"
-):
     """Recursively install an entire directory tree rooted at *src*.
 
     Same as :py:func:`copy_tree` with the addition of setting proper
@@ -886,21 +845,12 @@ def install_tree(
         dest (str): the destination directory
         symlinks (bool): whether or not to preserve symlinks
         ignore (typing.Callable): function indicating which files to ignore
-        allow_broken_symlinks (bool): whether or not to allow broken (dangling) symlinks,
-            On Windows, setting this to True will raise an exception.
 
     Raises:
         IOError: if *src* does not match any files or directories
         ValueError: if *src* is a parent directory of *dest*
     """
-    copy_tree(
+    copy_tree(src, dest, symlinks=symlinks, ignore=ignore, _permissions=True)
-        src,
-        dest,
-        symlinks=symlinks,
-        allow_broken_symlinks=allow_broken_symlinks,
-        ignore=ignore,
-        _permissions=True,
-    )
 
 
 @system_path_filter
@@ -1304,12 +1254,7 @@ def traverse_tree(
     Keyword Arguments:
         order (str): Whether to do pre- or post-order traversal. Accepted
             values are 'pre' and 'post'
-        ignore (typing.Callable): function indicating which files to ignore. This will also
+        ignore (typing.Callable): function indicating which files to ignore
-            ignore symlinks if they point to an ignored file (regardless of whether the symlink
-            is explicitly ignored); note this only supports one layer of indirection (i.e. if
-            you have x -> y -> z, and z is ignored but x/y are not, then y would be ignored
-            but not x). To avoid this, make sure the ignore function also ignores the symlink
-            paths too.
         follow_nonexisting (bool): Whether to descend into directories in
             ``src`` that do not exit in ``dest``. Default is True
         follow_links (bool): Whether to descend into symlinks in ``src``
@@ -1336,24 +1281,11 @@ def traverse_tree(
         dest_child = os.path.join(dest_path, f)
         rel_child = os.path.join(rel_path, f)
 
-        # If the source path is a link and the link's source is ignored, then ignore the link too,
-        # but only do this if the ignore is defined.
-        if ignore is not None:
-            if islink(source_child) and not follow_links:
-                target = readlink(source_child)
-                all_parents = accumulate(target.split(os.sep), lambda x, y: os.path.join(x, y))
-                if any(map(ignore, all_parents)):
-                    tty.warn(
-                        f"Skipping {source_path} because the source or a part of the source's "
-                        f"path is included in the ignores."
-                    )
-                    continue
-
         # Treat as a directory
         # TODO: for symlinks, os.path.isdir looks for the link target. If the
         # target is relative to the link, then that may not resolve properly
         # relative to our cwd - see resolve_link_target_relative_to_the_link
-        if os.path.isdir(source_child) and (follow_links or not islink(source_child)):
+        if os.path.isdir(source_child) and (follow_links or not os.path.islink(source_child)):
             # When follow_nonexisting isn't set, don't descend into dirs
             # in source that do not exist in dest
             if follow_nonexisting or os.path.exists(dest_child):
@@ -1379,11 +1311,7 @@ def traverse_tree(
 
 def lexists_islink_isdir(path):
     """Computes the tuple (lexists(path), islink(path), isdir(path)) in a minimal
-    number of stat calls on unix. Use os.path and symlink.islink methods for windows."""
+    number of stat calls."""
-    if sys.platform == "win32":
-        if not os.path.lexists(path):
-            return False, False, False
-        return os.path.lexists(path), islink(path), os.path.isdir(path)
     # First try to lstat, so we know if it's a link or not.
     try:
         lst = os.lstat(path)
@@ -1408,7 +1336,7 @@ def lexists_islink_isdir(path):
     return True, is_link, is_dir
 
 
-class BaseDirectoryVisitor:
+class BaseDirectoryVisitor(object):
     """Base class and interface for :py:func:`visit_directory_tree`."""
 
     def visit_file(self, root, rel_path, depth):
@@ -1598,7 +1526,7 @@ def remove_if_dead_link(path):
     Parameters:
         path (str): The potential dead link
     """
-    if islink(path) and not os.path.exists(path):
+    if os.path.islink(path) and not os.path.exists(path):
         os.unlink(path)
 
 
@@ -1657,7 +1585,7 @@ def remove_linked_tree(path):
         kwargs["onerror"] = readonly_file_handler(ignore_errors=True)
 
     if os.path.exists(path):
-        if islink(path):
+        if os.path.islink(path):
             shutil.rmtree(os.path.realpath(path), **kwargs)
             os.unlink(path)
         else:
@@ -1824,14 +1752,9 @@ def find(root, files, recursive=True):
         files = [files]
 
     if recursive:
-        tty.debug(f"Find (recursive): {root} {str(files)}")
+        return _find_recursive(root, files)
-        result = _find_recursive(root, files)
     else:
-        tty.debug(f"Find (not recursive): {root} {str(files)}")
+        return _find_non_recursive(root, files)
-        result = _find_non_recursive(root, files)
-
-    tty.debug(f"Find complete: {root} {str(files)}")
-    return result
 
 
 @system_path_filter
@@ -1967,7 +1890,7 @@ class HeaderList(FileList):
     include_regex = re.compile(r"(.*?)(\binclude\b)(.*)")
 
     def __init__(self, files):
-        super().__init__(files)
+        super(HeaderList, self).__init__(files)
 
         self._macro_definitions = []
         self._directories = None
@@ -1993,7 +1916,7 @@ def _default_directories(self):
         """Default computation of directories based on the list of
         header files.
         """
-        dir_list = super().directories
+        dir_list = super(HeaderList, self).directories
         values = []
         for d in dir_list:
             # If the path contains a subdirectory named 'include' then stop
@@ -2429,7 +2352,7 @@ def find_all_libraries(root, recursive=False):
     )
 
 
-class WindowsSimulatedRPath:
+class WindowsSimulatedRPath(object):
     """Class representing Windows filesystem rpath analog
 
     One instance of this class is associated with a package (only on Windows)
@@ -2458,7 +2381,7 @@ def library_dependents(self):
         """
         Set of directories where package binaries/libraries are located.
         """
-        return set([pathlib.Path(self.pkg.prefix.bin)]) | self._additional_library_dependents
+        return set([self.pkg.prefix.bin]) | self._additional_library_dependents
 
     def add_library_dependent(self, *dest):
         """
@@ -2471,9 +2394,9 @@ def add_library_dependent(self, *dest):
         """
         for pth in dest:
             if os.path.isfile(pth):
-                self._additional_library_dependents.add(pathlib.Path(pth).parent)
+                self._additional_library_dependents.add(os.path.dirname)
             else:
-                self._additional_library_dependents.add(pathlib.Path(pth))
+                self._additional_library_dependents.add(pth)
 
     @property
     def rpaths(self):
@@ -2486,7 +2409,7 @@ def rpaths(self):
             dependent_libs.extend(list(find_all_shared_libraries(path, recursive=True)))
         for extra_path in self._addl_rpaths:
             dependent_libs.extend(list(find_all_shared_libraries(extra_path, recursive=True)))
-        return set([pathlib.Path(x) for x in dependent_libs])
+        return set(dependent_libs)
 
     def add_rpath(self, *paths):
         """
@@ -2502,7 +2425,7 @@ def add_rpath(self, *paths):
         """
         self._addl_rpaths = self._addl_rpaths | set(paths)
 
-    def _link(self, path: pathlib.Path, dest_dir: pathlib.Path):
+    def _link(self, path, dest_dir):
         """Perform link step of simulated rpathing, installing
         simlinks of file in path to the dest_dir
         location. This method deliberately prevents
@@ -2510,35 +2433,27 @@ def _link(self, path: pathlib.Path, dest_dir: pathlib.Path):
         This is because it is both meaningless from an rpath
         perspective, and will cause an error when Developer
         mode is not enabled"""
-
+        file_name = os.path.basename(path)
-        def report_already_linked():
+        dest_file = os.path.join(dest_dir, file_name)
-            # We have either already symlinked or we are encoutering a naming clash
+        if os.path.exists(dest_dir) and not dest_file == path:
-            # either way, we don't want to overwrite existing libraries
-            already_linked = islink(str(dest_file))
-            tty.debug(
-                "Linking library %s to %s failed, " % (str(path), str(dest_file))
-                + "already linked."
-                if already_linked
-                else "library with name %s already exists at location %s."
-                % (str(file_name), str(dest_dir))
-            )
-
-        file_name = path.name
-        dest_file = dest_dir / file_name
-        if not dest_file.exists() and dest_dir.exists() and not dest_file == path:
             try:
-                symlink(str(path), str(dest_file))
+                symlink(path, dest_file)
             # For py2 compatibility, we have to catch the specific Windows error code
             # associate with trying to create a file that already exists (winerror 183)
-            # Catch OSErrors missed by the SymlinkError checks
             except OSError as e:
                 if sys.platform == "win32" and (e.winerror == 183 or e.errno == errno.EEXIST):
-                    report_already_linked()
+                    # We have either already symlinked or we are encoutering a naming clash
+                    # either way, we don't want to overwrite existing libraries
+                    already_linked = islink(dest_file)
+                    tty.debug(
+                        "Linking library %s to %s failed, " % (path, dest_file) + "already linked."
+                        if already_linked
+                        else "library with name %s already exists at location %s."
+                        % (file_name, dest_dir)
+                    )
+                    pass
                 else:
                     raise e
-            # catch errors we raise ourselves from Spack
-            except llnl.util.symlink.AlreadyExistsError:
-                report_already_linked()
 
     def establish_link(self):
         """
@@ -2771,7 +2686,7 @@ def remove_directory_contents(dir):
     """Remove all contents of a directory."""
     if os.path.exists(dir):
         for entry in [os.path.join(dir, entry) for entry in os.listdir(dir)]:
-            if os.path.isfile(entry) or islink(entry):
+            if os.path.isfile(entry) or os.path.islink(entry):
                 os.unlink(entry)
             else:
                 shutil.rmtree(entry)

lib/spack/llnl/util/lang.py

@@ -3,6 +3,8 @@
 #
 # SPDX-License-Identifier: (Apache-2.0 OR MIT)
 
+from __future__ import division
+
 import collections.abc
 import contextlib
 import functools
@@ -766,10 +768,10 @@ def pretty_seconds(seconds):
 
 class RequiredAttributeError(ValueError):
     def __init__(self, message):
-        super().__init__(message)
+        super(RequiredAttributeError, self).__init__(message)
 
 
-class ObjectWrapper:
+class ObjectWrapper(object):
     """Base class that wraps an object. Derived classes can add new behavior
     while staying undercover.
 
@@ -796,7 +798,7 @@ def __init__(self, wrapped_object):
         self.__dict__ = wrapped_object.__dict__
 
 
-class Singleton:
+class Singleton(object):
     """Simple wrapper for lazily initialized singleton objects."""
 
     def __init__(self, factory):
@@ -821,7 +823,7 @@ def __getattr__(self, name):
         # 'instance'/'_instance' to be defined or it will enter an infinite
         # loop, so protect against that here.
         if name in ["_instance", "instance"]:
-            raise AttributeError(f"cannot create {name}")
+            raise AttributeError()
         return getattr(self.instance, name)
 
     def __getitem__(self, name):
@@ -843,6 +845,27 @@ def __repr__(self):
         return repr(self.instance)
 
 
+class LazyReference(object):
+    """Lazily evaluated reference to part of a singleton."""
+
+    def __init__(self, ref_function):
+        self.ref_function = ref_function
+
+    def __getattr__(self, name):
+        if name == "ref_function":
+            raise AttributeError()
+        return getattr(self.ref_function(), name)
+
+    def __getitem__(self, name):
+        return self.ref_function()[name]
+
+    def __str__(self):
+        return str(self.ref_function())
+
+    def __repr__(self):
+        return repr(self.ref_function())
+
+
 def load_module_from_file(module_name, module_path):
     """Loads a python module from the path of the corresponding file.
 
@@ -920,7 +943,7 @@ def _wrapper(args):
     return _wrapper
 
 
-class Devnull:
+class Devnull(object):
     """Null stream with less overhead than ``os.devnull``.
 
     See https://stackoverflow.com/a/2929954.
@@ -1037,7 +1060,7 @@ def __str__(self):
         return str(self.data)
 
 
-class GroupedExceptionHandler:
+class GroupedExceptionHandler(object):
     """A generic mechanism to coalesce multiple exceptions and preserve tracebacks."""
 
     def __init__(self):
@@ -1068,7 +1091,7 @@ def grouped_message(self, with_tracebacks: bool = True) -> str:
         return "due to the following failures:\n{0}".format("\n".join(each_exception_message))
 
 
-class GroupedExceptionForwarder:
+class GroupedExceptionForwarder(object):
     """A contextmanager to capture exceptions and forward them to a
     GroupedExceptionHandler."""
 
@@ -1088,7 +1111,7 @@ def __exit__(self, exc_type, exc_value, tb):
         return True
 
 
-class classproperty:
+class classproperty(object):
     """Non-data descriptor to evaluate a class-level property. The function that performs
     the evaluation is injected at creation time and take an instance (could be None) and
     an owner (i.e. the class that originated the instance)

lib/spack/llnl/util/link_tree.py

@@ -5,6 +5,8 @@
 
 """LinkTree class for setting up trees of symbolic links."""
 
+from __future__ import print_function
+
 import filecmp
 import os
 import shutil
@@ -285,7 +287,7 @@ def visit_symlinked_file(self, root, rel_path, depth):
         self.visit_file(root, rel_path, depth)
 
 
-class LinkTree:
+class LinkTree(object):
     """Class to create trees of symbolic links from a source directory.
 
     LinkTree objects are constructed with a source root.  Their
@@ -430,12 +432,12 @@ class MergeConflictError(Exception):
 
 class ConflictingSpecsError(MergeConflictError):
     def __init__(self, spec_1, spec_2):
-        super().__init__(spec_1, spec_2)
+        super(MergeConflictError, self).__init__(spec_1, spec_2)
 
 
 class SingleMergeConflictError(MergeConflictError):
     def __init__(self, path):
-        super().__init__("Package merge blocked by file: %s" % path)
+        super(MergeConflictError, self).__init__("Package merge blocked by file: %s" % path)
 
 
 class MergeConflictSummary(MergeConflictError):
@@ -450,4 +452,4 @@ def __init__(self, conflicts):
             msg += "\n    `{0}` and `{1}` both project to `{2}`".format(
                 conflict.src_a, conflict.src_b, conflict.dst
             )
-        super().__init__(msg)
+        super(MergeConflictSummary, self).__init__(msg)

lib/spack/llnl/util/lock.py

@@ -9,12 +9,11 @@
 import sys
 import time
 from datetime import datetime
-from types import TracebackType
-from typing import IO, Any, Callable, ContextManager, Dict, Generator, Optional, Tuple, Type, Union
 
-from llnl.util import lang, tty
+import llnl.util.tty as tty
+from llnl.util.lang import pretty_seconds
 
-from ..string import plural
+import spack.util.string
 
 if sys.platform != "win32":
     import fcntl
@@ -35,15 +34,12 @@
 ]
 
 
-ReleaseFnType = Optional[Callable[[], bool]]
+#: A useful replacement for functions that should return True when not provided
+#: for example.
+true_fn = lambda: True
 
 
-def true_fn() -> bool:
+class OpenFile(object):
-    """A function that always returns True."""
-    return True
-
-
-class OpenFile:
     """Record for keeping track of open lockfiles (with reference counting).
 
     There's really only one ``OpenFile`` per inode, per process, but we record the
@@ -52,12 +48,12 @@ class OpenFile:
     file descriptors as well in the future.
     """
 
-    def __init__(self, fh: IO) -> None:
+    def __init__(self, fh):
         self.fh = fh
         self.refs = 0
 
 
-class OpenFileTracker:
+class OpenFileTracker(object):
     """Track open lockfiles, to minimize number of open file descriptors.
 
     The ``fcntl`` locks that Spack uses are associated with an inode and a process.
@@ -82,11 +78,11 @@ class OpenFileTracker:
     work in Python and assume the GIL.
     """
 
-    def __init__(self) -> None:
+    def __init__(self):
         """Create a new ``OpenFileTracker``."""
-        self._descriptors: Dict[Any, OpenFile] = {}
+        self._descriptors = {}
 
-    def get_fh(self, path: str) -> IO:
+    def get_fh(self, path):
         """Get a filehandle for a lockfile.
 
         This routine will open writable files for read/write even if you're asking
@@ -94,7 +90,7 @@ def get_fh(self, path: str) -> IO:
         (write) lock later if requested.
 
         Arguments:
-          path: path to lock file we want a filehandle for
+          path (str): path to lock file we want a filehandle for
         """
         # Open writable files as 'r+' so we can upgrade to write later
         os_mode, fh_mode = (os.O_RDWR | os.O_CREAT), "r+"
@@ -143,7 +139,7 @@ def get_fh(self, path: str) -> IO:
     def release_by_stat(self, stat):
         key = (stat.st_dev, stat.st_ino, os.getpid())
         open_file = self._descriptors.get(key)
-        assert open_file, "Attempted to close non-existing inode: %s" % stat.st_ino
+        assert open_file, "Attempted to close non-existing inode: %s" % stat.st_inode
 
         open_file.refs -= 1
         if not open_file.refs:
@@ -161,7 +157,7 @@ def purge(self):
 
 #: Open file descriptors for locks in this process. Used to prevent one process
 #: from opening the sam file many times for different byte range locks
-FILE_TRACKER = OpenFileTracker()
+file_tracker = OpenFileTracker()
 
 
 def _attempts_str(wait_time, nattempts):
@@ -169,11 +165,11 @@ def _attempts_str(wait_time, nattempts):
     if nattempts <= 1:
         return ""
 
-    attempts = plural(nattempts, "attempt")
+    attempts = spack.util.string.plural(nattempts, "attempt")
-    return " after {} and {}".format(lang.pretty_seconds(wait_time), attempts)
+    return " after {} and {}".format(pretty_seconds(wait_time), attempts)
 
 
-class LockType:
+class LockType(object):
     READ = 0
     WRITE = 1
 
@@ -192,11 +188,11 @@ def to_module(tid):
         return lock
 
     @staticmethod
-    def is_valid(op: int) -> bool:
+    def is_valid(op):
         return op == LockType.READ or op == LockType.WRITE
 
 
-class Lock:
+class Lock(object):
     """This is an implementation of a filesystem lock using Python's lockf.
 
     In Python, ``lockf`` actually calls ``fcntl``, so this should work with
@@ -211,16 +207,7 @@ class Lock:
     overlapping byte ranges in the same file).
     """
 
-    def __init__(
+    def __init__(self, path, start=0, length=0, default_timeout=None, debug=False, desc=""):
-        self,
-        path: str,
-        *,
-        start: int = 0,
-        length: int = 0,
-        default_timeout: Optional[float] = None,
-        debug: bool = False,
-        desc: str = "",
-    ) -> None:
         """Construct a new lock on the file at ``path``.
 
         By default, the lock applies to the whole file.  Optionally,
@@ -233,17 +220,17 @@ def __init__(
         beginning of the file.
 
         Args:
-            path: path to the lock
+            path (str): path to the lock
-            start: optional byte offset at which the lock starts
+            start (int): optional byte offset at which the lock starts
-            length: optional number of bytes to lock
+            length (int): optional number of bytes to lock
-            default_timeout: seconds to wait for lock attempts,
+            default_timeout (int): number of seconds to wait for lock attempts,
                 where None means to wait indefinitely
-            debug: debug mode specific to locking
+            debug (bool): debug mode specific to locking
-            desc: optional debug message lock description, which is
+            desc (str): optional debug message lock description, which is
                 helpful for distinguishing between different Spack locks.
         """
         self.path = path
-        self._file: Optional[IO] = None
+        self._file = None
         self._reads = 0
         self._writes = 0
 
@@ -255,7 +242,7 @@ def __init__(
         self.debug = debug
 
         # optional debug description
-        self.desc = f" ({desc})" if desc else ""
+        self.desc = " ({0})".format(desc) if desc else ""
 
         # If the user doesn't set a default timeout, or if they choose
         # None, 0, etc. then lock attempts will not time out (unless the
@@ -263,15 +250,11 @@ def __init__(
         self.default_timeout = default_timeout or None
 
         # PID and host of lock holder (only used in debug mode)
-        self.pid: Optional[int] = None
+        self.pid = self.old_pid = None
-        self.old_pid: Optional[int] = None
+        self.host = self.old_host = None
-        self.host: Optional[str] = None
-        self.old_host: Optional[str] = None
 
     @staticmethod
-    def _poll_interval_generator(
+    def _poll_interval_generator(_wait_times=None):
-        _wait_times: Optional[Tuple[float, float, float]] = None
-    ) -> Generator[float, None, None]:
         """This implements a backoff scheme for polling a contended resource
         by suggesting a succession of wait times between polls.
 
@@ -294,21 +277,21 @@ def _poll_interval_generator(
             num_requests += 1
             yield wait_time
 
-    def __repr__(self) -> str:
+    def __repr__(self):
         """Formal representation of the lock."""
         rep = "{0}(".format(self.__class__.__name__)
         for attr, value in self.__dict__.items():
             rep += "{0}={1}, ".format(attr, value.__repr__())
         return "{0})".format(rep.strip(", "))
 
-    def __str__(self) -> str:
+    def __str__(self):
         """Readable string (with key fields) of the lock."""
         location = "{0}[{1}:{2}]".format(self.path, self._start, self._length)
         timeout = "timeout={0}".format(self.default_timeout)
         activity = "#reads={0}, #writes={1}".format(self._reads, self._writes)
         return "({0}, {1}, {2})".format(location, timeout, activity)
 
-    def _lock(self, op: int, timeout: Optional[float] = None) -> Tuple[float, int]:
+    def _lock(self, op, timeout=None):
         """This takes a lock using POSIX locks (``fcntl.lockf``).
 
         The lock is implemented as a spin lock using a nonblocking call
@@ -327,7 +310,7 @@ def _lock(self, op: int, timeout: Optional[float] = None) -> Tuple[float, int]:
         # Create file and parent directories if they don't exist.
         if self._file is None:
             self._ensure_parent_directory()
-            self._file = FILE_TRACKER.get_fh(self.path)
+            self._file = file_tracker.get_fh(self.path)
 
         if LockType.to_module(op) == fcntl.LOCK_EX and self._file.mode == "r":
             # Attempt to upgrade to write lock w/a read-only file.
@@ -336,7 +319,7 @@ def _lock(self, op: int, timeout: Optional[float] = None) -> Tuple[float, int]:
 
         self._log_debug(
             "{} locking [{}:{}]: timeout {}".format(
-                op_str.lower(), self._start, self._length, lang.pretty_seconds(timeout or 0)
+                op_str.lower(), self._start, self._length, pretty_seconds(timeout or 0)
             )
         )
 
@@ -360,20 +343,15 @@ def _lock(self, op: int, timeout: Optional[float] = None) -> Tuple[float, int]:
         total_wait_time = time.time() - start_time
         raise LockTimeoutError(op_str.lower(), self.path, total_wait_time, num_attempts)
 
-    def _poll_lock(self, op: int) -> bool:
+    def _poll_lock(self, op):
         """Attempt to acquire the lock in a non-blocking manner. Return whether
         the locking attempt succeeds
         """
-        assert self._file is not None, "cannot poll a lock without the file being set"
         module_op = LockType.to_module(op)
         try:
             # Try to get the lock (will raise if not available.)
             fcntl.lockf(
-                self._file.fileno(),
+                self._file, module_op | fcntl.LOCK_NB, self._length, self._start, os.SEEK_SET
-                module_op | fcntl.LOCK_NB,
-                self._length,
-                self._start,
-                os.SEEK_SET,
             )
 
             # help for debugging distributed locking
@@ -399,7 +377,7 @@ def _poll_lock(self, op: int) -> bool:
 
         return False
 
-    def _ensure_parent_directory(self) -> str:
+    def _ensure_parent_directory(self):
         parent = os.path.dirname(self.path)
 
         # relative paths to lockfiles in the current directory have no parent
@@ -418,22 +396,20 @@ def _ensure_parent_directory(self) -> str:
                 raise
         return parent
 
-    def _read_log_debug_data(self) -> None:
+    def _read_log_debug_data(self):
         """Read PID and host data out of the file if it is there."""
-        assert self._file is not None, "cannot read debug log without the file being set"
         self.old_pid = self.pid
         self.old_host = self.host
 
         line = self._file.read()
         if line:
             pid, host = line.strip().split(",")
-            _, _, pid = pid.rpartition("=")
+            _, _, self.pid = pid.rpartition("=")
             _, _, self.host = host.rpartition("=")
-            self.pid = int(pid)
+            self.pid = int(self.pid)
 
-    def _write_log_debug_data(self) -> None:
+    def _write_log_debug_data(self):
         """Write PID and host data to the file, recording old values."""
-        assert self._file is not None, "cannot write debug log without the file being set"
         self.old_pid = self.pid
         self.old_host = self.host
 
@@ -447,21 +423,20 @@ def _write_log_debug_data(self) -> None:
         self._file.flush()
         os.fsync(self._file.fileno())
 
-    def _unlock(self) -> None:
+    def _unlock(self):
         """Releases a lock using POSIX locks (``fcntl.lockf``)
 
         Releases the lock regardless of mode. Note that read locks may
         be masquerading as write locks, but this removes either.
 
         """
-        assert self._file is not None, "cannot unlock without the file being set"
+        fcntl.lockf(self._file, fcntl.LOCK_UN, self._length, self._start, os.SEEK_SET)
-        fcntl.lockf(self._file.fileno(), fcntl.LOCK_UN, self._length, self._start, os.SEEK_SET)
+        file_tracker.release_by_fh(self._file)
-        FILE_TRACKER.release_by_fh(self._file)
         self._file = None
         self._reads = 0
         self._writes = 0
 
-    def acquire_read(self, timeout: Optional[float] = None) -> bool:
+    def acquire_read(self, timeout=None):
         """Acquires a recursive, shared lock for reading.
 
         Read and write locks can be acquired and released in arbitrary
@@ -486,7 +461,7 @@ def acquire_read(self, timeout: Optional[float] = None) -> bool:
             self._reads += 1
             return False
 
-    def acquire_write(self, timeout: Optional[float] = None) -> bool:
+    def acquire_write(self, timeout=None):
         """Acquires a recursive, exclusive lock for writing.
 
         Read and write locks can be acquired and released in arbitrary
@@ -516,7 +491,7 @@ def acquire_write(self, timeout: Optional[float] = None) -> bool:
             self._writes += 1
             return False
 
-    def is_write_locked(self) -> bool:
+    def is_write_locked(self):
         """Check if the file is write locked
 
         Return:
@@ -533,7 +508,7 @@ def is_write_locked(self) -> bool:
 
         return False
 
-    def downgrade_write_to_read(self, timeout: Optional[float] = None) -> None:
+    def downgrade_write_to_read(self, timeout=None):
         """
         Downgrade from an exclusive write lock to a shared read.
 
@@ -552,7 +527,7 @@ def downgrade_write_to_read(self, timeout: Optional[float] = None) -> None:
         else:
             raise LockDowngradeError(self.path)
 
-    def upgrade_read_to_write(self, timeout: Optional[float] = None) -> None:
+    def upgrade_read_to_write(self, timeout=None):
         """
         Attempts to upgrade from a shared read lock to an exclusive write.
 
@@ -571,7 +546,7 @@ def upgrade_read_to_write(self, timeout: Optional[float] = None) -> None:
         else:
             raise LockUpgradeError(self.path)
 
-    def release_read(self, release_fn: ReleaseFnType = None) -> bool:
+    def release_read(self, release_fn=None):
         """Releases a read lock.
 
         Arguments:
@@ -607,7 +582,7 @@ def release_read(self, release_fn: ReleaseFnType = None) -> bool:
             self._reads -= 1
             return False
 
-    def release_write(self, release_fn: ReleaseFnType = None) -> bool:
+    def release_write(self, release_fn=None):
         """Releases a write lock.
 
         Arguments:
@@ -648,65 +623,65 @@ def release_write(self, release_fn: ReleaseFnType = None) -> bool:
             else:
                 return False
 
-    def cleanup(self) -> None:
+    def cleanup(self):
         if self._reads == 0 and self._writes == 0:
             os.unlink(self.path)
         else:
             raise LockError("Attempting to cleanup active lock.")
 
-    def _get_counts_desc(self) -> str:
+    def _get_counts_desc(self):
         return (
             "(reads {0}, writes {1})".format(self._reads, self._writes) if tty.is_verbose() else ""
         )
 
-    def _log_acquired(self, locktype, wait_time, nattempts) -> None:
+    def _log_acquired(self, locktype, wait_time, nattempts):
         attempts_part = _attempts_str(wait_time, nattempts)
         now = datetime.now()
         desc = "Acquired at %s" % now.strftime("%H:%M:%S.%f")
         self._log_debug(self._status_msg(locktype, "{0}{1}".format(desc, attempts_part)))
 
-    def _log_acquiring(self, locktype) -> None:
+    def _log_acquiring(self, locktype):
         self._log_debug(self._status_msg(locktype, "Acquiring"), level=3)
 
-    def _log_debug(self, *args, **kwargs) -> None:
+    def _log_debug(self, *args, **kwargs):
         """Output lock debug messages."""
         kwargs["level"] = kwargs.get("level", 2)
         tty.debug(*args, **kwargs)
 
-    def _log_downgraded(self, wait_time, nattempts) -> None:
+    def _log_downgraded(self, wait_time, nattempts):
         attempts_part = _attempts_str(wait_time, nattempts)
         now = datetime.now()
         desc = "Downgraded at %s" % now.strftime("%H:%M:%S.%f")
         self._log_debug(self._status_msg("READ LOCK", "{0}{1}".format(desc, attempts_part)))
 
-    def _log_downgrading(self) -> None:
+    def _log_downgrading(self):
         self._log_debug(self._status_msg("WRITE LOCK", "Downgrading"), level=3)
 
-    def _log_released(self, locktype) -> None:
+    def _log_released(self, locktype):
         now = datetime.now()
         desc = "Released at %s" % now.strftime("%H:%M:%S.%f")
         self._log_debug(self._status_msg(locktype, desc))
 
-    def _log_releasing(self, locktype) -> None:
+    def _log_releasing(self, locktype):
         self._log_debug(self._status_msg(locktype, "Releasing"), level=3)
 
-    def _log_upgraded(self, wait_time, nattempts) -> None:
+    def _log_upgraded(self, wait_time, nattempts):
         attempts_part = _attempts_str(wait_time, nattempts)
         now = datetime.now()
         desc = "Upgraded at %s" % now.strftime("%H:%M:%S.%f")
         self._log_debug(self._status_msg("WRITE LOCK", "{0}{1}".format(desc, attempts_part)))
 
-    def _log_upgrading(self) -> None:
+    def _log_upgrading(self):
         self._log_debug(self._status_msg("READ LOCK", "Upgrading"), level=3)
 
-    def _status_msg(self, locktype: str, status: str) -> str:
+    def _status_msg(self, locktype, status):
         status_desc = "[{0}] {1}".format(status, self._get_counts_desc())
         return "{0}{1.desc}: {1.path}[{1._start}:{1._length}] {2}".format(
             locktype, self, status_desc
         )
 
 
-class LockTransaction:
+class LockTransaction(object):
     """Simple nested transaction context manager that uses a file lock.
 
     Arguments:
@@ -734,13 +709,7 @@ class LockTransaction:
 
     """
 
-    def __init__(
+    def __init__(self, lock, acquire=None, release=None, timeout=None):
-        self,
-        lock: Lock,
-        acquire: Union[ReleaseFnType, ContextManager] = None,
-        release: Union[ReleaseFnType, ContextManager] = None,
-        timeout: Optional[float] = None,
-    ) -> None:
         self._lock = lock
         self._timeout = timeout
         self._acquire_fn = acquire
@@ -755,20 +724,15 @@ def __enter__(self):
             else:
                 return self._as
 
-    def __exit__(
+    def __exit__(self, type, value, traceback):
-        self,
-        exc_type: Optional[Type[BaseException]],
-        exc_value: Optional[BaseException],
-        traceback: Optional[TracebackType],
-    ) -> bool:
         suppress = False
 
         def release_fn():
             if self._release_fn is not None:
-                return self._release_fn(exc_type, exc_value, traceback)
+                return self._release_fn(type, value, traceback)
 
         if self._as and hasattr(self._as, "__exit__"):
-            if self._as.__exit__(exc_type, exc_value, traceback):
+            if self._as.__exit__(type, value, traceback):
                 suppress = True
 
         if self._exit(release_fn):
@@ -776,12 +740,6 @@ def release_fn():
 
         return suppress
 
-    def _enter(self) -> bool:
-        return NotImplemented
-
-    def _exit(self, release_fn: ReleaseFnType) -> bool:
-        return NotImplemented
-
 
 class ReadTransaction(LockTransaction):
     """LockTransaction context manager that does a read and releases it."""
@@ -812,7 +770,7 @@ class LockDowngradeError(LockError):
 
     def __init__(self, path):
         msg = "Cannot downgrade lock from write to read on file: %s" % path
-        super().__init__(msg)
+        super(LockDowngradeError, self).__init__(msg)
 
 
 class LockLimitError(LockError):
@@ -824,10 +782,10 @@ class LockTimeoutError(LockError):
 
     def __init__(self, lock_type, path, time, attempts):
         fmt = "Timed out waiting for a {} lock after {}.\n    Made {} {} on file: {}"
-        super().__init__(
+        super(LockTimeoutError, self).__init__(
             fmt.format(
                 lock_type,
-                lang.pretty_seconds(time),
+                pretty_seconds(time),
                 attempts,
                 "attempt" if attempts == 1 else "attempts",
                 path,
@@ -840,7 +798,7 @@ class LockUpgradeError(LockError):
 
     def __init__(self, path):
         msg = "Cannot upgrade lock from read to write on file: %s" % path
-        super().__init__(msg)
+        super(LockUpgradeError, self).__init__(msg)
 
 
 class LockPermissionError(LockError):
@@ -852,7 +810,7 @@ class LockROFileError(LockPermissionError):
 
     def __init__(self, path):
         msg = "Can't take write lock on read-only file: %s" % path
-        super().__init__(msg)
+        super(LockROFileError, self).__init__(msg)
 
 
 class CantCreateLockError(LockPermissionError):
@@ -861,4 +819,4 @@ class CantCreateLockError(LockPermissionError):
     def __init__(self, path):
         msg = "cannot create lock '%s': " % path
         msg += "file does not exist and location is not writable"
-        super().__init__(msg)
+        super(LockError, self).__init__(msg)

lib/spack/llnl/util/symlink.py

@@ -2,189 +2,77 @@
 # Spack Project Developers. See the top-level COPYRIGHT file for details.
 #
 # SPDX-License-Identifier: (Apache-2.0 OR MIT)
+import errno
 import os
-import re
 import shutil
-import subprocess
 import sys
 import tempfile
+from os.path import exists, join
 
-from llnl.util import lang, tty
+from llnl.util import lang
-
-from ..path import system_path_filter
 
 if sys.platform == "win32":
     from win32file import CreateHardLink
 
-is_windows = sys.platform == "win32"
 
-
+def symlink(real_path, link_path):
-def symlink(source_path: str, link_path: str, allow_broken_symlinks: bool = not is_windows):
     """
-    Create a link.
+    Create a symbolic link.
 
-    On non-Windows and Windows with System Administrator
+    On Windows, use junctions if os.symlink fails.
-    privleges this will be a normal symbolic link via
-    os.symlink.
-
-    On Windows without privledges the link will be a
-    junction for a directory and a hardlink for a file.
-    On Windows the various link types are:
-
-    Symbolic Link: A link to a file or directory on the
-    same or different volume (drive letter) or even to
-    a remote file or directory (using UNC in its path).
-    Need System Administrator privileges to make these.
-
-    Hard Link: A link to a file on the same volume (drive
-    letter) only. Every file (file's data) has at least 1
-    hard link (file's name). But when this method creates
-    a new hard link there will be 2. Deleting all hard
-    links effectively deletes the file. Don't need System
-    Administrator privileges.
-
-    Junction: A link to a directory on the same or different
-    volume (drive letter) but not to a remote directory. Don't
-    need System Administrator privileges.
-
-    Parameters:
-        source_path (str): The real file or directory that the link points to.
-            Must be absolute OR relative to the link.
-        link_path (str): The path where the link will exist.
-        allow_broken_symlinks (bool): On Linux or Mac, don't raise an exception if the source_path
-            doesn't exist. This will still raise an exception on Windows.
     """
-    source_path = os.path.normpath(source_path)
+    if sys.platform != "win32":
-    win_source_path = source_path
+        os.symlink(real_path, link_path)
-    link_path = os.path.normpath(link_path)
+    elif _win32_can_symlink():
-
+        # Windows requires target_is_directory=True when the target is a dir.
-    # Never allow broken links on Windows.
+        os.symlink(real_path, link_path, target_is_directory=os.path.isdir(real_path))
-    if sys.platform == "win32" and allow_broken_symlinks:
-        raise ValueError("allow_broken_symlinks parameter cannot be True on Windows.")
-
-    if not allow_broken_symlinks:
-        # Perform basic checks to make sure symlinking will succeed
-        if os.path.lexists(link_path):
-            raise AlreadyExistsError(
-                f"Link path ({link_path}) already exists. Cannot create link."
-            )
-
-        if not os.path.exists(source_path):
-            if os.path.isabs(source_path) and not allow_broken_symlinks:
-                # An absolute source path that does not exist will result in a broken link.
-                raise SymlinkError(
-                    f"Source path ({source_path}) is absolute but does not exist. Resulting "
-                    f"link would be broken so not making link."
-                )
-            else:
-                # os.symlink can create a link when the given source path is relative to
-                # the link path. Emulate this behavior and check to see if the source exists
-                # relative to the link path ahead of link creation to prevent broken
-                # links from being made.
-                link_parent_dir = os.path.dirname(link_path)
-                relative_path = os.path.join(link_parent_dir, source_path)
-                if os.path.exists(relative_path):
-                    # In order to work on windows, the source path needs to be modified to be
-                    # relative because hardlink/junction dont resolve relative paths the same
-                    # way as os.symlink. This is ignored on other operating systems.
-                    win_source_path = relative_path
-                elif not allow_broken_symlinks:
-                    raise SymlinkError(
-                        f"The source path ({source_path}) is not relative to the link path "
-                        f"({link_path}). Resulting link would be broken so not making link."
-                    )
-
-    # Create the symlink
-    if sys.platform == "win32" and not _windows_can_symlink():
-        _windows_create_link(win_source_path, link_path)
     else:
-        os.symlink(source_path, link_path, target_is_directory=os.path.isdir(source_path))
+        try:
+            # Try to use junctions
+            _win32_junction(real_path, link_path)
+        except OSError as e:
+            if e.errno == errno.EEXIST:
+                # EEXIST error indicates that file we're trying to "link"
+                # is already present, don't bother trying to copy which will also fail
+                # just raise
+                raise
+            else:
+                # If all else fails, fall back to copying files
+                shutil.copyfile(real_path, link_path)
 
 
-def islink(path: str) -> bool:
+def islink(path):
-    """Override os.islink to give correct answer for spack logic.
+    return os.path.islink(path) or _win32_is_junction(path)
-
-    For Non-Windows: a link can be determined with the os.path.islink method.
-    Windows-only methods will return false for other operating systems.
-
-    For Windows: spack considers symlinks, hard links, and junctions to
-    all be links, so if any of those are True, return True.
-
-    Args:
-        path (str): path to check if it is a link.
-
-    Returns:
-         bool - whether the path is any kind link or not.
-    """
-    return any([os.path.islink(path), _windows_is_junction(path), _windows_is_hardlink(path)])
 
 
-def _windows_is_hardlink(path: str) -> bool:
+# '_win32' functions based on
-    """Determines if a path is a windows hard link. This is accomplished
+# https://github.com/Erotemic/ubelt/blob/master/ubelt/util_links.py
-    by looking at the number of links using os.stat. A non-hard-linked file
+def _win32_junction(path, link):
-    will have a st_nlink value of 1, whereas a hard link will have a value
+    # junctions require absolute paths
-    larger than 1. Note that both the original and hard-linked file will
+    if not os.path.isabs(link):
-    return True because they share the same inode.
+        link = os.path.abspath(link)
 
-    Args:
+    # os.symlink will fail if link exists, emulate the behavior here
-        path (str): Windows path to check for a hard link
+    if exists(link):
+        raise OSError(errno.EEXIST, "File  exists: %s -> %s" % (link, path))
 
-    Returns:
+    if not os.path.isabs(path):
-         bool - Whether the path is a hard link or not.
+        parent = os.path.join(link, os.pardir)
-    """
+        path = os.path.join(parent, path)
-    if sys.platform != "win32" or os.path.islink(path) or not os.path.exists(path):
+        path = os.path.abspath(path)
-        return False
 
-    return os.stat(path).st_nlink > 1
+    CreateHardLink(link, path)
-
-
-def _windows_is_junction(path: str) -> bool:
-    """Determines if a path is a windows junction. A junction can be
-    determined using a bitwise AND operation between the file's
-    attribute bitmask and the known junction bitmask (0x400).
-
-    Args:
-        path (str): A non-file path
-
-    Returns:
-        bool - whether the path is a junction or not.
-    """
-    if sys.platform != "win32" or os.path.islink(path) or os.path.isfile(path):
-        return False
-
-    import ctypes.wintypes
-
-    get_file_attributes = ctypes.windll.kernel32.GetFileAttributesW  # type: ignore[attr-defined]
-    get_file_attributes.argtypes = (ctypes.wintypes.LPWSTR,)
-    get_file_attributes.restype = ctypes.wintypes.DWORD
-
-    invalid_file_attributes = 0xFFFFFFFF
-    reparse_point = 0x400
-    file_attr = get_file_attributes(str(path))
-
-    if file_attr == invalid_file_attributes:
-        return False
-
-    return file_attr & reparse_point > 0
 
 
 @lang.memoized
-def _windows_can_symlink() -> bool:
+def _win32_can_symlink():
-    """
-    Determines if windows is able to make a symlink depending on
-    the system configuration and the level of the user's permissions.
-    """
-    if sys.platform != "win32":
-        tty.warn("windows_can_symlink method can't be used on non-Windows OS.")
-        return False
-
     tempdir = tempfile.mkdtemp()
 
-    dpath = os.path.join(tempdir, "dpath")
+    dpath = join(tempdir, "dpath")
-    fpath = os.path.join(tempdir, "fpath.txt")
+    fpath = join(tempdir, "fpath.txt")
 
-    dlink = os.path.join(tempdir, "dlink")
+    dlink = join(tempdir, "dlink")
-    flink = os.path.join(tempdir, "flink.txt")
+    flink = join(tempdir, "flink.txt")
 
     import llnl.util.filesystem as fs
 
@@ -208,140 +96,24 @@ def _windows_can_symlink() -> bool:
     return can_symlink_directories and can_symlink_files
 
 
-def _windows_create_link(source: str, link: str):
+def _win32_is_junction(path):
     """
-    Attempts to create a Hard Link or Junction as an alternative
+    Determines if a path is a win32 junction
-    to a symbolic link. This is called when symbolic links cannot
-    be created.
     """
-    if sys.platform != "win32":
+    if os.path.islink(path):
-        raise SymlinkError("windows_create_link method can't be used on non-Windows OS.")
+        return False
-    elif os.path.isdir(source):
-        _windows_create_junction(source=source, link=link)
-    elif os.path.isfile(source):
-        _windows_create_hard_link(path=source, link=link)
-    else:
-        raise SymlinkError(
-            f"Cannot create link from {source}. It is neither a file nor a directory."
-        )
 
+    if sys.platform == "win32":
+        import ctypes.wintypes
 
-def _windows_create_junction(source: str, link: str):
+        GetFileAttributes = ctypes.windll.kernel32.GetFileAttributesW
-    """Duly verify that the path and link are eligible to create a junction,
+        GetFileAttributes.argtypes = (ctypes.wintypes.LPWSTR,)
-    then create the junction.
+        GetFileAttributes.restype = ctypes.wintypes.DWORD
-    """
-    if sys.platform != "win32":
-        raise SymlinkError("windows_create_junction method can't be used on non-Windows OS.")
-    elif not os.path.exists(source):
-        raise SymlinkError("Source path does not exist, cannot create a junction.")
-    elif os.path.lexists(link):
-        raise AlreadyExistsError("Link path already exists, cannot create a junction.")
-    elif not os.path.isdir(source):
-        raise SymlinkError("Source path is not a directory, cannot create a junction.")
 
-    import subprocess
+        INVALID_FILE_ATTRIBUTES = 0xFFFFFFFF
+        FILE_ATTRIBUTE_REPARSE_POINT = 0x400
 
-    cmd = ["cmd", "/C", "mklink", "/J", link, source]
+        res = GetFileAttributes(path)
-    proc = subprocess.Popen(cmd, stdout=subprocess.PIPE, stderr=subprocess.PIPE)
+        return res != INVALID_FILE_ATTRIBUTES and bool(res & FILE_ATTRIBUTE_REPARSE_POINT)
-    out, err = proc.communicate()
-    tty.debug(out.decode())
-    if proc.returncode != 0:
-        err = err.decode()
-        tty.error(err)
-        raise SymlinkError("Make junction command returned a non-zero return code.", err)
 
-
+    return False
-def _windows_create_hard_link(path: str, link: str):
-    """Duly verify that the path and link are eligible to create a hard
-    link, then create the hard link.
-    """
-    if sys.platform != "win32":
-        raise SymlinkError("windows_create_hard_link method can't be used on non-Windows OS.")
-    elif not os.path.exists(path):
-        raise SymlinkError(f"File path {path} does not exist. Cannot create hard link.")
-    elif os.path.lexists(link):
-        raise AlreadyExistsError(f"Link path ({link}) already exists. Cannot create hard link.")
-    elif not os.path.isfile(path):
-        raise SymlinkError(f"File path ({link}) is not a file. Cannot create hard link.")
-    else:
-        tty.debug(f"Creating hard link {link} pointing to {path}")
-        CreateHardLink(link, path)
-
-
-def readlink(path: str):
-    """Spack utility to override of os.readlink method to work cross platform"""
-    if _windows_is_hardlink(path):
-        return _windows_read_hard_link(path)
-    elif _windows_is_junction(path):
-        return _windows_read_junction(path)
-    else:
-        return os.readlink(path)
-
-
-def _windows_read_hard_link(link: str) -> str:
-    """Find all of the files that point to the same inode as the link"""
-    if sys.platform != "win32":
-        raise SymlinkError("Can't read hard link on non-Windows OS.")
-    link = os.path.abspath(link)
-    fsutil_cmd = ["fsutil", "hardlink", "list", link]
-    proc = subprocess.Popen(fsutil_cmd, stdout=subprocess.PIPE, stderr=subprocess.PIPE, shell=True)
-    out, err = proc.communicate()
-    if proc.returncode != 0:
-        raise SymlinkError(f"An error occurred while reading hard link: {err.decode()}")
-
-    # fsutil response does not include the drive name, so append it back to each linked file.
-    drive, link_tail = os.path.splitdrive(os.path.abspath(link))
-    links = set([os.path.join(drive, p) for p in out.decode().splitlines()])
-    links.remove(link)
-    if len(links) == 1:
-        return links.pop()
-    elif len(links) > 1:
-        # TODO: How best to handle the case where 3 or more paths point to a single inode?
-        raise SymlinkError(f"Found multiple paths pointing to the same inode {links}")
-    else:
-        raise SymlinkError("Cannot determine hard link source path.")
-
-
-def _windows_read_junction(link: str):
-    """Find the path that a junction points to."""
-    if sys.platform != "win32":
-        raise SymlinkError("Can't read junction on non-Windows OS.")
-
-    link = os.path.abspath(link)
-    link_basename = os.path.basename(link)
-    link_parent = os.path.dirname(link)
-    fsutil_cmd = ["dir", "/a:l", link_parent]
-    proc = subprocess.Popen(fsutil_cmd, stdout=subprocess.PIPE, stderr=subprocess.PIPE, shell=True)
-    out, err = proc.communicate()
-    if proc.returncode != 0:
-        raise SymlinkError(f"An error occurred while reading junction: {err.decode()}")
-    matches = re.search(rf"<JUNCTION>\s+{link_basename} \[(.*)]", out.decode())
-    if matches:
-        return matches.group(1)
-    else:
-        raise SymlinkError("Could not find junction path.")
-
-
-@system_path_filter
-def resolve_link_target_relative_to_the_link(link):
-    """
-    os.path.isdir uses os.path.exists, which for links will check
-    the existence of the link target. If the link target is relative to
-    the link, we need to construct a pathname that is valid from
-    our cwd (which may not be the same as the link's directory)
-    """
-    target = readlink(link)
-    if os.path.isabs(target):
-        return target
-    link_dir = os.path.dirname(os.path.abspath(link))
-    return os.path.join(link_dir, target)
-
-
-class SymlinkError(RuntimeError):
-    """Exception class for errors raised while creating symlinks,
-    junctions and hard links
-    """
-
-
-class AlreadyExistsError(SymlinkError):
-    """Link path already exists."""

lib/spack/llnl/util/tty/__init__.py

@@ -3,6 +3,8 @@
 #
 # SPDX-License-Identifier: (Apache-2.0 OR MIT)
 
+from __future__ import unicode_literals
+
 import contextlib
 import io
 import os
@@ -12,7 +14,6 @@
 import traceback
 from datetime import datetime
 from sys import platform as _platform
-from typing import NoReturn
 
 if _platform != "win32":
     import fcntl
@@ -211,7 +212,6 @@ def info(message, *args, **kwargs):
                 stream.write(line + "\n")
         else:
             stream.write(indent + _output_filter(str(arg)) + "\n")
-    stream.flush()
 
 
 def verbose(message, *args, **kwargs):
@@ -246,7 +246,7 @@ def warn(message, *args, **kwargs):
     info("Warning: " + str(message), *args, **kwargs)
 
 
-def die(message, *args, **kwargs) -> NoReturn:
+def die(message, *args, **kwargs):
     kwargs.setdefault("countback", 4)
     error(message, *args, **kwargs)
     sys.exit(1)

lib/spack/llnl/util/tty/colify.py

@@ -6,6 +6,8 @@
 """
 Routines for printing columnar output.  See ``colify()`` for more information.
 """
+from __future__ import division, unicode_literals
+
 import io
 import os
 import sys

lib/spack/llnl/util/tty/color.py

@@ -59,6 +59,8 @@
 
 To output an @, use '@@'.  To output a } inside braces, use '}}'.
 """
+from __future__ import unicode_literals
+
 import re
 import sys
 from contextlib import contextmanager
@@ -68,7 +70,7 @@ class ColorParseError(Exception):
     """Raised when a color format fails to parse."""
 
     def __init__(self, message):
-        super().__init__(message)
+        super(ColorParseError, self).__init__(message)
 
 
 # Text styles for ansi codes
@@ -203,7 +205,7 @@ def color_when(value):
     set_color_when(old_value)
 
 
-class match_to_ansi:
+class match_to_ansi(object):
     def __init__(self, color=True, enclose=False):
         self.color = _color_when_value(color)
         self.enclose = enclose
@@ -319,7 +321,7 @@ def cescape(string):
     return string
 
 
-class ColorStream:
+class ColorStream(object):
     def __init__(self, stream, color=None):
         self._stream = stream
         self._color = color

lib/spack/llnl/util/tty/log.py

@@ -5,6 +5,8 @@
 
 """Utility classes for logging the output of blocks of code.
 """
+from __future__ import unicode_literals
+
 import atexit
 import ctypes
 import errno
@@ -65,7 +67,7 @@ def _strip(line):
     return _escape.sub("", line)
 
 
-class keyboard_input:
+class keyboard_input(object):
     """Context manager to disable line editing and echoing.
 
     Use this with ``sys.stdin`` for keyboard input, e.g.::
@@ -242,7 +244,7 @@ def __exit__(self, exc_type, exception, traceback):
                 signal.signal(signum, old_handler)
 
 
-class Unbuffered:
+class Unbuffered(object):
     """Wrapper for Python streams that forces them to be unbuffered.
 
     This is implemented by forcing a flush after each write.
@@ -287,7 +289,7 @@ def _file_descriptors_work(*streams):
         return False
 
 
-class FileWrapper:
+class FileWrapper(object):
     """Represents a file. Can be an open stream, a path to a file (not opened
     yet), or neither. When unwrapped, it returns an open file (or file-like)
     object.
@@ -329,7 +331,7 @@ def close(self):
             self.file.close()
 
 
-class MultiProcessFd:
+class MultiProcessFd(object):
     """Return an object which stores a file descriptor and can be passed as an
     argument to a function run with ``multiprocessing.Process``, such that
     the file descriptor is available in the subprocess."""
@@ -429,7 +431,7 @@ def log_output(*args, **kwargs):
         return nixlog(*args, **kwargs)
 
 
-class nixlog:
+class nixlog(object):
     """
     Under the hood, we spawn a daemon and set up a pipe between this
     process and the daemon.  The daemon writes our output to both the
@@ -750,7 +752,7 @@ def close(self):
                 os.close(self.saved_stream)
 
 
-class winlog:
+class winlog(object):
     """
     Similar to nixlog, with underlying
     functionality ported to support Windows.
@@ -780,7 +782,7 @@ def __enter__(self):
             raise RuntimeError("file argument must be set by __init__ ")
 
         # Open both write and reading on logfile
-        if isinstance(self.logfile, io.StringIO):
+        if type(self.logfile) == io.StringIO:
             self._ioflag = True
             # cannot have two streams on tempfile, so we must make our own
             sys.stdout = self.logfile

lib/spack/llnl/util/tty/pty.py

@@ -13,6 +13,8 @@
 
 Note: The functionality in this module is unsupported on Windows
 """
+from __future__ import print_function
+
 import multiprocessing
 import os
 import re
@@ -34,7 +36,7 @@
     pass
 
 
-class ProcessController:
+class ProcessController(object):
     """Wrapper around some fundamental process control operations.
 
     This allows one process (the controller) to drive another (the
@@ -155,7 +157,7 @@ def wait_running(self):
         self.wait(lambda: "T" not in self.proc_status())
 
 
-class PseudoShell:
+class PseudoShell(object):
     """Sets up controller and minion processes with a PTY.
 
     You can create a ``PseudoShell`` if you want to test how some

lib/spack/spack/__init__.py

@@ -4,7 +4,7 @@
 # SPDX-License-Identifier: (Apache-2.0 OR MIT)
 
 #: PEP440 canonical <major>.<minor>.<micro>.<devN> string
-__version__ = "0.22.0.dev0"
+__version__ = "0.21.0.dev0"
 spack_version = __version__
 
 

lib/spack/spack/abi.py

@@ -8,18 +8,16 @@
 from llnl.util.lang import memoized
 
 import spack.spec
-import spack.version
 from spack.compilers.clang import Clang
+from spack.spec import CompilerSpec
 from spack.util.executable import Executable, ProcessError
 
 
-class ABI:
+class ABI(object):
     """This class provides methods to test ABI compatibility between specs.
     The current implementation is rather rough and could be improved."""
 
-    def architecture_compatible(
+    def architecture_compatible(self, target, constraint):
-        self, target: spack.spec.Spec, constraint: spack.spec.Spec
-    ) -> bool:
         """Return true if architecture of target spec is ABI compatible
         to the architecture of constraint spec. If either the target
         or constraint specs have no architecture, target is also defined
@@ -36,7 +34,7 @@ def _gcc_get_libstdcxx_version(self, version):
         a compiler's libstdc++ or libgcc_s"""
         from spack.build_environment import dso_suffix
 
-        spec = spack.spec.CompilerSpec("gcc", version)
+        spec = CompilerSpec("gcc", version)
         compilers = spack.compilers.compilers_for_spec(spec)
         if not compilers:
             return None
@@ -79,20 +77,16 @@ def _gcc_compiler_compare(self, pversion, cversion):
             return False
         return plib == clib
 
-    def _intel_compiler_compare(
+    def _intel_compiler_compare(self, pversion, cversion):
-        self, pversion: spack.version.ClosedOpenRange, cversion: spack.version.ClosedOpenRange
-    ) -> bool:
         """Returns true iff the intel version pversion and cversion
         are ABI compatible"""
 
         # Test major and minor versions.  Ignore build version.
-        pv = pversion.lo
+        if len(pversion.version) < 2 or len(cversion.version) < 2:
-        cv = cversion.lo
+            return False
-        return pv.up_to(2) == cv.up_to(2)
+        return pversion.version[:2] == cversion.version[:2]
 
-    def compiler_compatible(
+    def compiler_compatible(self, parent, child, **kwargs):
-        self, parent: spack.spec.Spec, child: spack.spec.Spec, loose: bool = False
-    ) -> bool:
         """Return true if compilers for parent and child are ABI compatible."""
         if not parent.compiler or not child.compiler:
             return True
@@ -101,7 +95,7 @@ def compiler_compatible(
             # Different compiler families are assumed ABI incompatible
             return False
 
-        if loose:
+        if kwargs.get("loose", False):
             return True
 
         # TODO: Can we move the specialized ABI matching stuff
@@ -122,10 +116,9 @@ def compiler_compatible(
                     return True
         return False
 
-    def compatible(
+    def compatible(self, target, constraint, **kwargs):
-        self, target: spack.spec.Spec, constraint: spack.spec.Spec, loose: bool = False
-    ) -> bool:
         """Returns true if target spec is ABI compatible to constraint spec"""
+        loosematch = kwargs.get("loose", False)
         return self.architecture_compatible(target, constraint) and self.compiler_compatible(
-            target, constraint, loose=loose
+            target, constraint, loose=loosematch
         )

lib/spack/spack/audit.py

@@ -38,14 +38,10 @@ def _search_duplicate_compilers(error_cls):
 import ast
 import collections
 import collections.abc
-import glob
 import inspect
-import io
 import itertools
-import pathlib
 import pickle
 import re
-import warnings
 from urllib.request import urlopen
 
 import llnl.util.lang
@@ -55,7 +51,6 @@ def _search_duplicate_compilers(error_cls):
 import spack.repo
 import spack.spec
 import spack.util.crypto
-import spack.util.spack_yaml as syaml
 import spack.variant
 
 #: Map an audit tag to a list of callables implementing checks
@@ -65,7 +60,7 @@ def _search_duplicate_compilers(error_cls):
 GROUPS = collections.defaultdict(list)
 
 
-class Error:
+class Error(object):
     """Information on an error reported in a test."""
 
     def __init__(self, summary, details):
@@ -252,88 +247,6 @@ def _search_duplicate_specs_in_externals(error_cls):
     return errors
 
 
-@config_packages
-def _deprecated_preferences(error_cls):
-    """Search package preferences deprecated in v0.21 (and slated for removal in v0.22)"""
-    # TODO (v0.22): remove this audit as the attributes will not be allowed in config
-    errors = []
-    packages_yaml = spack.config.CONFIG.get_config("packages")
-
-    def make_error(attribute_name, config_data, summary):
-        s = io.StringIO()
-        s.write("Occurring in the following file:\n")
-        dict_view = syaml.syaml_dict((k, v) for k, v in config_data.items() if k == attribute_name)
-        syaml.dump_config(dict_view, stream=s, blame=True)
-        return error_cls(summary=summary, details=[s.getvalue()])
-
-    if "all" in packages_yaml and "version" in packages_yaml["all"]:
-        summary = "Using the deprecated 'version' attribute under 'packages:all'"
-        errors.append(make_error("version", packages_yaml["all"], summary))
-
-    for package_name in packages_yaml:
-        if package_name == "all":
-            continue
-
-        package_conf = packages_yaml[package_name]
-        for attribute in ("compiler", "providers", "target"):
-            if attribute not in package_conf:
-                continue
-            summary = (
-                f"Using the deprecated '{attribute}' attribute " f"under 'packages:{package_name}'"
-            )
-            errors.append(make_error(attribute, package_conf, summary))
-
-    return errors
-
-
-@config_packages
-def _avoid_mismatched_variants(error_cls):
-    """Warns if variant preferences have mismatched types or names."""
-    errors = []
-    packages_yaml = spack.config.CONFIG.get_config("packages")
-
-    def make_error(config_data, summary):
-        s = io.StringIO()
-        s.write("Occurring in the following file:\n")
-        syaml.dump_config(config_data, stream=s, blame=True)
-        return error_cls(summary=summary, details=[s.getvalue()])
-
-    for pkg_name in packages_yaml:
-        # 'all:' must be more forgiving, since it is setting defaults for everything
-        if pkg_name == "all" or "variants" not in packages_yaml[pkg_name]:
-            continue
-
-        preferences = packages_yaml[pkg_name]["variants"]
-        if not isinstance(preferences, list):
-            preferences = [preferences]
-
-        for variants in preferences:
-            current_spec = spack.spec.Spec(variants)
-            pkg_cls = spack.repo.PATH.get_pkg_class(pkg_name)
-            for variant in current_spec.variants.values():
-                # Variant does not exist at all
-                if variant.name not in pkg_cls.variants:
-                    summary = (
-                        f"Setting a preference for the '{pkg_name}' package to the "
-                        f"non-existing variant '{variant.name}'"
-                    )
-                    errors.append(make_error(preferences, summary))
-                    continue
-
-                # Variant cannot accept this value
-                s = spack.spec.Spec(pkg_name)
-                try:
-                    s.update_variant_validate(variant.name, variant.value)
-                except Exception:
-                    summary = (
-                        f"Setting the variant '{variant.name}' of the '{pkg_name}' package "
-                        f"to the invalid value '{str(variant)}'"
-                    )
-                    errors.append(make_error(preferences, summary))
-
-    return errors
-
-
 #: Sanity checks on package directives
 package_directives = AuditClass(
     group="packages",
@@ -373,7 +286,7 @@ def _check_build_test_callbacks(pkgs, error_cls):
     """Ensure stand-alone test method is not included in build-time callbacks"""
     errors = []
     for pkg_name in pkgs:
-        pkg_cls = spack.repo.PATH.get_pkg_class(pkg_name)
+        pkg_cls = spack.repo.path.get_pkg_class(pkg_name)
         test_callbacks = getattr(pkg_cls, "build_time_test_callbacks", None)
 
         # TODO (post-34236): "test*"->"test_*" once remove deprecated methods
@@ -391,48 +304,33 @@ def _check_build_test_callbacks(pkgs, error_cls):
 
 @package_directives
 def _check_patch_urls(pkgs, error_cls):
-    """Ensure that patches fetched from GitHub and GitLab have stable sha256
+    """Ensure that patches fetched from GitHub have stable sha256 hashes."""
-    hashes."""
     github_patch_url_re = (
         r"^https?://(?:patch-diff\.)?github(?:usercontent)?\.com/"
-        r".+/.+/(?:commit|pull)/[a-fA-F0-9]+\.(?:patch|diff)"
+        ".+/.+/(?:commit|pull)/[a-fA-F0-9]*.(?:patch|diff)"
-    )
-    # Only .diff URLs have stable/full hashes:
-    # https://forum.gitlab.com/t/patches-with-full-index/29313
-    gitlab_patch_url_re = (
-        r"^https?://(?:.+)?gitlab(?:.+)/"
-        r".+/.+/-/(?:commit|merge_requests)/[a-fA-F0-9]+\.(?:patch|diff)"
     )
 
     errors = []
     for pkg_name in pkgs:
-        pkg_cls = spack.repo.PATH.get_pkg_class(pkg_name)
+        pkg_cls = spack.repo.path.get_pkg_class(pkg_name)
         for condition, patches in pkg_cls.patches.items():
             for patch in patches:
                 if not isinstance(patch, spack.patch.UrlPatch):
                     continue
 
-                if re.match(github_patch_url_re, patch.url):
+                if not re.match(github_patch_url_re, patch.url):
-                    full_index_arg = "?full_index=1"
+                    continue
-                    if not patch.url.endswith(full_index_arg):
+
-                        errors.append(
+                full_index_arg = "?full_index=1"
-                            error_cls(
+                if not patch.url.endswith(full_index_arg):
-                                "patch URL in package {0} must end with {1}".format(
+                    errors.append(
-                                    pkg_cls.name, full_index_arg
+                        error_cls(
-                                ),
+                            "patch URL in package {0} must end with {1}".format(
-                                [patch.url],
+                                pkg_cls.name, full_index_arg
-                            )
+                            ),
-                        )
+                            [patch.url],
-                elif re.match(gitlab_patch_url_re, patch.url):
-                    if not patch.url.endswith(".diff"):
-                        errors.append(
-                            error_cls(
-                                "patch URL in package {0} must end with .diff".format(
-                                    pkg_cls.name
-                                ),
-                                [patch.url],
-                            )
                         )
+                    )
 
     return errors
 
@@ -444,7 +342,7 @@ def _search_for_reserved_attributes_names_in_packages(pkgs, error_cls):
     errors = []
     for pkg_name in pkgs:
         name_definitions = collections.defaultdict(list)
-        pkg_cls = spack.repo.PATH.get_pkg_class(pkg_name)
+        pkg_cls = spack.repo.path.get_pkg_class(pkg_name)
 
         for cls_item in inspect.getmro(pkg_cls):
             for name in RESERVED_NAMES:
@@ -485,7 +383,7 @@ def _ensure_packages_are_pickeleable(pkgs, error_cls):
     """Ensure that package objects are pickleable"""
     errors = []
     for pkg_name in pkgs:
-        pkg_cls = spack.repo.PATH.get_pkg_class(pkg_name)
+        pkg_cls = spack.repo.path.get_pkg_class(pkg_name)
         pkg = pkg_cls(spack.spec.Spec(pkg_name))
         try:
             pickle.dumps(pkg)
@@ -499,7 +397,7 @@ def _ensure_packages_are_pickeleable(pkgs, error_cls):
 @package_properties
 def _ensure_packages_are_unparseable(pkgs, error_cls):
     """Ensure that all packages can unparse and that unparsed code is valid Python"""
-    import spack.package_hash as ph
+    import spack.util.package_hash as ph
 
     errors = []
     for pkg_name in pkgs:
@@ -526,7 +424,7 @@ def _ensure_all_versions_can_produce_a_fetcher(pkgs, error_cls):
     """Ensure all versions in a package can produce a fetcher"""
     errors = []
     for pkg_name in pkgs:
-        pkg_cls = spack.repo.PATH.get_pkg_class(pkg_name)
+        pkg_cls = spack.repo.path.get_pkg_class(pkg_name)
         pkg = pkg_cls(spack.spec.Spec(pkg_name))
         try:
             spack.fetch_strategy.check_pkg_attributes(pkg)
@@ -551,7 +449,7 @@ def _ensure_docstring_and_no_fixme(pkgs, error_cls):
     ]
     for pkg_name in pkgs:
         details = []
-        filename = spack.repo.PATH.filename_for_package_name(pkg_name)
+        filename = spack.repo.path.filename_for_package_name(pkg_name)
         with open(filename, "r") as package_file:
             for i, line in enumerate(package_file):
                 pattern = next((r for r in fixme_regexes if r.search(line)), None)
@@ -563,7 +461,7 @@ def _ensure_docstring_and_no_fixme(pkgs, error_cls):
             error_msg = "Package '{}' contains boilerplate that need to be removed"
             errors.append(error_cls(error_msg.format(pkg_name), details))
 
-        pkg_cls = spack.repo.PATH.get_pkg_class(pkg_name)
+        pkg_cls = spack.repo.path.get_pkg_class(pkg_name)
         if not pkg_cls.__doc__:
             error_msg = "Package '{}' miss a docstring"
             errors.append(error_cls(error_msg.format(pkg_name), []))
@@ -576,7 +474,7 @@ def _ensure_all_packages_use_sha256_checksums(pkgs, error_cls):
     """Ensure no packages use md5 checksums"""
     errors = []
     for pkg_name in pkgs:
-        pkg_cls = spack.repo.PATH.get_pkg_class(pkg_name)
+        pkg_cls = spack.repo.path.get_pkg_class(pkg_name)
         if pkg_cls.manual_download:
             continue
 
@@ -613,7 +511,7 @@ def _ensure_env_methods_are_ported_to_builders(pkgs, error_cls):
     """Ensure that methods modifying the build environment are ported to builder classes."""
     errors = []
     for pkg_name in pkgs:
-        pkg_cls = spack.repo.PATH.get_pkg_class(pkg_name)
+        pkg_cls = spack.repo.path.get_pkg_class(pkg_name)
         buildsystem_variant, _ = pkg_cls.variants["build_system"]
         buildsystem_names = [getattr(x, "value", x) for x in buildsystem_variant.values]
         builder_cls_names = [spack.builder.BUILDER_CLS[x].__name__ for x in buildsystem_names]
@@ -640,17 +538,13 @@ def _linting_package_file(pkgs, error_cls):
     """Check for correctness of links"""
     errors = []
     for pkg_name in pkgs:
-        pkg_cls = spack.repo.PATH.get_pkg_class(pkg_name)
+        pkg_cls = spack.repo.path.get_pkg_class(pkg_name)
 
         # Does the homepage have http, and if so, does https work?
         if pkg_cls.homepage.startswith("http://"):
             https = re.sub("http", "https", pkg_cls.homepage, 1)
             try:
-                response = urlopen(
+                response = urlopen(https)
-                    https,
-                    verify_ssl=spack.config.get("config:verify_ssl", True),
-                    timeout=spack.config.get("config:connect_timeout", 10),
-                )
             except Exception as e:
                 msg = 'Error with attempting https for "{0}": '
                 errors.append(error_cls(msg.format(pkg_cls.name), [str(e)]))
@@ -668,7 +562,7 @@ def _unknown_variants_in_directives(pkgs, error_cls):
     """Report unknown or wrong variants in directives for this package"""
     errors = []
     for pkg_name in pkgs:
-        pkg_cls = spack.repo.PATH.get_pkg_class(pkg_name)
+        pkg_cls = spack.repo.path.get_pkg_class(pkg_name)
 
         # Check "conflicts" directive
         for conflict, triggers in pkg_cls.conflicts.items():
@@ -734,15 +628,15 @@ def _unknown_variants_in_dependencies(pkgs, error_cls):
     """Report unknown dependencies and wrong variants for dependencies"""
     errors = []
     for pkg_name in pkgs:
-        pkg_cls = spack.repo.PATH.get_pkg_class(pkg_name)
+        pkg_cls = spack.repo.path.get_pkg_class(pkg_name)
-        filename = spack.repo.PATH.filename_for_package_name(pkg_name)
+        filename = spack.repo.path.filename_for_package_name(pkg_name)
         for dependency_name, dependency_data in pkg_cls.dependencies.items():
             # No need to analyze virtual packages
-            if spack.repo.PATH.is_virtual(dependency_name):
+            if spack.repo.path.is_virtual(dependency_name):
                 continue
 
             try:
-                dependency_pkg_cls = spack.repo.PATH.get_pkg_class(dependency_name)
+                dependency_pkg_cls = spack.repo.path.get_pkg_class(dependency_name)
             except spack.repo.UnknownPackageError:
                 # This dependency is completely missing, so report
                 # and continue the analysis
@@ -781,7 +675,7 @@ def _ensure_variant_defaults_are_parsable(pkgs, error_cls):
     """Ensures that variant defaults are present and parsable from cli"""
     errors = []
     for pkg_name in pkgs:
-        pkg_cls = spack.repo.PATH.get_pkg_class(pkg_name)
+        pkg_cls = spack.repo.path.get_pkg_class(pkg_name)
         for variant_name, entry in pkg_cls.variants.items():
             variant, _ = entry
             default_is_parsable = (
@@ -815,56 +709,30 @@ def _ensure_variant_defaults_are_parsable(pkgs, error_cls):
     return errors
 
 
-@package_directives
-def _ensure_variants_have_descriptions(pkgs, error_cls):
-    """Ensures that all variants have a description."""
-    errors = []
-    for pkg_name in pkgs:
-        pkg_cls = spack.repo.PATH.get_pkg_class(pkg_name)
-        for variant_name, entry in pkg_cls.variants.items():
-            variant, _ = entry
-            if not variant.description:
-                error_msg = "Variant '{}' in package '{}' is missing a description"
-                errors.append(error_cls(error_msg.format(variant_name, pkg_name), []))
-
-    return errors
-
-
 @package_directives
 def _version_constraints_are_satisfiable_by_some_version_in_repo(pkgs, error_cls):
     """Report if version constraints used in directives are not satisfiable"""
     errors = []
     for pkg_name in pkgs:
-        pkg_cls = spack.repo.PATH.get_pkg_class(pkg_name)
+        pkg_cls = spack.repo.path.get_pkg_class(pkg_name)
-        filename = spack.repo.PATH.filename_for_package_name(pkg_name)
+        filename = spack.repo.path.filename_for_package_name(pkg_name)
         dependencies_to_check = []
         for dependency_name, dependency_data in pkg_cls.dependencies.items():
             # Skip virtual dependencies for the time being, check on
             # their versions can be added later
-            if spack.repo.PATH.is_virtual(dependency_name):
+            if spack.repo.path.is_virtual(dependency_name):
                 continue
 
             dependencies_to_check.extend([edge.spec for edge in dependency_data.values()])
 
-        host_architecture = spack.spec.ArchSpec.default_arch()
         for s in dependencies_to_check:
             dependency_pkg_cls = None
             try:
-                dependency_pkg_cls = spack.repo.PATH.get_pkg_class(s.name)
+                dependency_pkg_cls = spack.repo.path.get_pkg_class(s.name)
-                # Some packages have hacks that might cause failures on some platform
+                assert any(v.intersects(s.versions) for v in list(dependency_pkg_cls.versions))
-                # Allow to explicitly set conditions to skip version checks in that case
-                skip_conditions = getattr(dependency_pkg_cls, "skip_version_audit", [])
-                skip_version_check = False
-                for condition in skip_conditions:
-                    if host_architecture.satisfies(spack.spec.Spec(condition).architecture):
-                        skip_version_check = True
-                        break
-                assert skip_version_check or any(
-                    v.intersects(s.versions) for v in list(dependency_pkg_cls.versions)
-                )
             except Exception:
                 summary = (
-                    "{0}: dependency on {1} cannot be satisfied by known versions of {1.name}"
+                    "{0}: dependency on {1} cannot be satisfied " "by known versions of {1.name}"
                 ).format(pkg_name, s)
                 details = ["happening in " + filename]
                 if dependency_pkg_cls is not None:
@@ -893,7 +761,7 @@ def _analyze_variants_in_directive(pkg, constraint, directive, error_cls):
         except variant_exceptions as e:
             summary = pkg.name + ': wrong variant in "{0}" directive'
             summary = summary.format(directive)
-            filename = spack.repo.PATH.filename_for_package_name(pkg.name)
+            filename = spack.repo.path.filename_for_package_name(pkg.name)
 
             error_msg = str(e).strip()
             if isinstance(e, KeyError):
@@ -904,123 +772,3 @@ def _analyze_variants_in_directive(pkg, constraint, directive, error_cls):
             errors.append(err)
 
     return errors
-
-
-@package_directives
-def _named_specs_in_when_arguments(pkgs, error_cls):
-    """Reports named specs in the 'when=' attribute of a directive.
-
-    Note that 'conflicts' is the only directive allowing that.
-    """
-    errors = []
-    for pkg_name in pkgs:
-        pkg_cls = spack.repo.PATH.get_pkg_class(pkg_name)
-
-        def _extracts_errors(triggers, summary):
-            _errors = []
-            for trigger in list(triggers):
-                when_spec = spack.spec.Spec(trigger)
-                if when_spec.name is not None and when_spec.name != pkg_name:
-                    details = [f"using '{trigger}', should be '^{trigger}'"]
-                    _errors.append(error_cls(summary=summary, details=details))
-            return _errors
-
-        for dname, triggers in pkg_cls.dependencies.items():
-            summary = f"{pkg_name}: wrong 'when=' condition for the '{dname}' dependency"
-            errors.extend(_extracts_errors(triggers, summary))
-
-        for vname, (variant, triggers) in pkg_cls.variants.items():
-            summary = f"{pkg_name}: wrong 'when=' condition for the '{vname}' variant"
-            errors.extend(_extracts_errors(triggers, summary))
-
-        for provided, triggers in pkg_cls.provided.items():
-            summary = f"{pkg_name}: wrong 'when=' condition for the '{provided}' virtual"
-            errors.extend(_extracts_errors(triggers, summary))
-
-        for _, triggers in pkg_cls.requirements.items():
-            triggers = [when_spec for when_spec, _, _ in triggers]
-            summary = f"{pkg_name}: wrong 'when=' condition in 'requires' directive"
-            errors.extend(_extracts_errors(triggers, summary))
-
-        triggers = list(pkg_cls.patches)
-        summary = f"{pkg_name}: wrong 'when=' condition in 'patch' directives"
-        errors.extend(_extracts_errors(triggers, summary))
-
-        triggers = list(pkg_cls.resources)
-        summary = f"{pkg_name}: wrong 'when=' condition in 'resource' directives"
-        errors.extend(_extracts_errors(triggers, summary))
-
-    return llnl.util.lang.dedupe(errors)
-
-
-#: Sanity checks on package directives
-external_detection = AuditClass(
-    group="externals",
-    tag="PKG-EXTERNALS",
-    description="Sanity checks for external software detection",
-    kwargs=("pkgs",),
-)
-
-
-def packages_with_detection_tests():
-    """Return the list of packages with a corresponding detection_test.yaml file."""
-    import spack.config
-    import spack.util.path
-
-    to_be_tested = []
-    for current_repo in spack.repo.PATH.repos:
-        namespace = current_repo.namespace
-        packages_dir = pathlib.PurePath(current_repo.packages_path)
-        pattern = packages_dir / "**" / "detection_test.yaml"
-        pkgs_with_tests = [
-            f"{namespace}.{str(pathlib.PurePath(x).parent.name)}" for x in glob.glob(str(pattern))
-        ]
-        to_be_tested.extend(pkgs_with_tests)
-
-    return to_be_tested
-
-
-@external_detection
-def _test_detection_by_executable(pkgs, error_cls):
-    """Test drive external detection for packages"""
-    import spack.detection
-
-    errors = []
-
-    # Filter the packages and retain only the ones with detection tests
-    pkgs_with_tests = packages_with_detection_tests()
-    selected_pkgs = []
-    for current_package in pkgs_with_tests:
-        _, unqualified_name = spack.repo.partition_package_name(current_package)
-        # Check for both unqualified name and qualified name
-        if unqualified_name in pkgs or current_package in pkgs:
-            selected_pkgs.append(current_package)
-    selected_pkgs.sort()
-
-    if not selected_pkgs:
-        summary = "No detection test to run"
-        details = [f'  "{p}" has no detection test' for p in pkgs]
-        warnings.warn("\n".join([summary] + details))
-        return errors
-
-    for pkg_name in selected_pkgs:
-        for idx, test_runner in enumerate(
-            spack.detection.detection_tests(pkg_name, spack.repo.PATH)
-        ):
-            specs = test_runner.execute()
-            expected_specs = test_runner.expected_specs
-
-            not_detected = set(expected_specs) - set(specs)
-            if not_detected:
-                summary = pkg_name + ": cannot detect some specs"
-                details = [f'"{s}" was not detected [test_id={idx}]' for s in sorted(not_detected)]
-                errors.append(error_cls(summary=summary, details=details))
-
-            not_expected = set(specs) - set(expected_specs)
-            if not_expected:
-                summary = pkg_name + ": detected unexpected specs"
-                msg = '"{0}" was detected, but was not expected [test_id={1}]'
-                details = [msg.format(s, idx) for s in sorted(not_expected)]
-                errors.append(error_cls(summary=summary, details=details))
-
-    return errors

lib/spack/spack/bootstrap/__init__.py

@@ -4,7 +4,7 @@
 # SPDX-License-Identifier: (Apache-2.0 OR MIT)
 """Function and classes needed to bootstrap Spack itself."""
 
-from .config import ensure_bootstrap_configuration, is_bootstrapping, store_path
+from .config import ensure_bootstrap_configuration, is_bootstrapping
 from .core import all_core_root_specs, ensure_core_dependencies, ensure_patchelf_in_path_or_raise
 from .environment import BootstrapEnvironment, ensure_environment_dependencies
 from .status import status_message
@@ -18,5 +18,4 @@
     "ensure_environment_dependencies",
     "BootstrapEnvironment",
     "status_message",
-    "store_path",
 ]

lib/spack/spack/bootstrap/_common.py

@@ -50,7 +50,7 @@ def _try_import_from_store(
         # We have to run as part of this python interpreter
         query_spec += " ^" + spec_for_current_python()
 
-    installed_specs = spack.store.STORE.db.query(query_spec, installed=True)
+    installed_specs = spack.store.db.query(query_spec, installed=True)
 
     for candidate_spec in installed_specs:
         pkg = candidate_spec["python"].package
@@ -183,7 +183,7 @@ def _executables_in_store(
     executables_str = ", ".join(executables)
     msg = "[BOOTSTRAP EXECUTABLES {0}] Try installed specs with query '{1}'"
     tty.debug(msg.format(executables_str, query_spec))
-    installed_specs = spack.store.STORE.db.query(query_spec, installed=True)
+    installed_specs = spack.store.db.query(query_spec, installed=True)
     if installed_specs:
         for concrete_spec in installed_specs:
             bin_dir = concrete_spec.prefix.bin
@@ -213,8 +213,7 @@ def _root_spec(spec_str: str) -> str:
     if str(spack.platforms.host()) == "darwin":
         spec_str += " %apple-clang"
     elif str(spack.platforms.host()) == "windows":
-        # TODO (johnwparent): Remove version constraint when clingo patch is up
+        spec_str += " %msvc"
-        spec_str += " %msvc@:19.37"
     else:
         spec_str += " %gcc"
 

lib/spack/spack/bootstrap/config.py

@@ -45,8 +45,7 @@ def spec_for_current_python() -> str:
 def root_path() -> str:
     """Root of all the bootstrap related folders"""
     return spack.util.path.canonicalize_path(
-        spack.config.get("bootstrap:root", spack.paths.default_user_bootstrap_path),
+        spack.config.get("bootstrap:root", spack.paths.default_user_bootstrap_path)
-        replacements=spack.paths.path_replacements(),
     )
 
 
@@ -80,16 +79,12 @@ def spack_python_interpreter() -> Generator:
 
 def _store_path() -> str:
     bootstrap_root_path = root_path()
-    return spack.util.path.canonicalize_path(
+    return spack.util.path.canonicalize_path(os.path.join(bootstrap_root_path, "store"))
-        os.path.join(bootstrap_root_path, "store"), replacements=spack.paths.path_replacements()
-    )
 
 
 def _config_path() -> str:
     bootstrap_root_path = root_path()
-    return spack.util.path.canonicalize_path(
+    return spack.util.path.canonicalize_path(os.path.join(bootstrap_root_path, "config"))
-        os.path.join(bootstrap_root_path, "config"), replacements=spack.paths.path_replacements()
-    )
 
 
 @contextlib.contextmanager
@@ -129,9 +124,9 @@ def _read_and_sanitize_configuration() -> Dict[str, Any]:
 def _bootstrap_config_scopes() -> Sequence["spack.config.ConfigScope"]:
     tty.debug("[BOOTSTRAP CONFIG SCOPE] name=_builtin")
     config_scopes: MutableSequence["spack.config.ConfigScope"] = [
-        spack.config.InternalConfigScope("_builtin", spack.config.CONFIG_DEFAULTS)
+        spack.config.InternalConfigScope("_builtin", spack.config.config_defaults)
     ]
-    configuration_paths = (spack.config.CONFIGURATION_DEFAULTS_PATH, ("bootstrap", _config_path()))
+    configuration_paths = (spack.config.configuration_defaults_path, ("bootstrap", _config_path()))
     for name, path in configuration_paths:
         platform = spack.platforms.host().name
         platform_scope = spack.config.ConfigScope(
@@ -148,28 +143,25 @@ def _bootstrap_config_scopes() -> Sequence["spack.config.ConfigScope"]:
 def _add_compilers_if_missing() -> None:
     arch = spack.spec.ArchSpec.frontend_arch()
     if not spack.compilers.compilers_for_arch(arch):
-        new_compilers = spack.compilers.find_new_compilers(
+        new_compilers = spack.compilers.find_new_compilers()
-            mixed_toolchain=sys.platform == "darwin"
-        )
         if new_compilers:
             spack.compilers.add_compilers_to_config(new_compilers, init_config=False)
 
 
 @contextlib.contextmanager
 def _ensure_bootstrap_configuration() -> Generator:
-    spack.store.ensure_singleton_created()
     bootstrap_store_path = store_path()
     user_configuration = _read_and_sanitize_configuration()
     with spack.environment.no_active_environment():
         with spack.platforms.prevent_cray_detection(), spack.platforms.use_platform(
             spack.platforms.real_host()
-        ), spack.repo.use_repositories(spack.paths.packages_path):
+        ), spack.repo.use_repositories(spack.paths.packages_path), spack.store.use_store(
+            bootstrap_store_path
+        ):
             # Default configuration scopes excluding command line
             # and builtin but accounting for platform specific scopes
             config_scopes = _bootstrap_config_scopes()
-            with spack.config.use_configuration(*config_scopes), spack.store.use_store(
+            with spack.config.use_configuration(*config_scopes):
-                bootstrap_store_path, extra_data={"padded_length": 0}
-            ):
                 # We may need to compile code from sources, so ensure we
                 # have compilers for the current platform
                 _add_compilers_if_missing()