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98 Commits

Author SHA1 Message Date
Todd Gamblin
0150e965a0 Remove deprecated --spec-file arg from tests
The `spack ci` tests were using the deprecated `--spec-file` argument, which should be
replaced with `--spec`.
2023-12-11 12:33:22 -08:00
Brian Van Essen
5d999d0e4f Add logic to cache the RPATH variables in CachedCMakePackages. (#41417) 2023-12-08 09:27:44 -08:00
Seth R. Johnson
694a1ff340 celeritas: new version 0.4.1 (#41504)
* celeritas: new version 0.4.1

* Mark correct versions as deprecated
2023-12-08 09:56:18 +00:00
Richard Berger
4ec451cfed flecsi: remove ^legion network=gasnet restriction (#41494) 2023-12-07 19:03:04 -07:00
Julien Cortial
a77eca7f88 cdt: Add versions 1.3.6 and 1.4.0 (#41490) 2023-12-07 14:27:39 -07:00
Greg Becker
14ac2b063a cce compiler: remove vestigial compiler names (#41303) 2023-12-07 15:17:03 -06:00
Tamara Dahlgren
edf4d6659d add missing endtime property to CDash (#41498) 2023-12-07 22:06:46 +01:00
Lydéric Debusschère
6531fbf425 py-mpldock: new package (#41316)
* py-mpldock: new package

* py-mpldock: remove version constraint on python

---------

Co-authored-by: LydDeb <lyderic.debusschere@eolen.com>
2023-12-07 21:24:05 +01:00
Victor Brunini
0a6045eadf Fix cdash reporter time stamps (#38825)
* Fix cdash reporter time stamps (#38818).
   The cdash reporter is created before packages are installed so save the
   starttime then instead of the endtime.
* Use endtime instead of starttime for the endtime of update

---------

Co-authored-by: Tamara Dahlgren <dahlgren1@llnl.gov>
2023-12-07 19:32:10 +00:00
Todd Gamblin
5722a13af0 Spack mailing list is now announcement-only (#41496)
Participation in the venerable Spack google group has dwindled, though we still have
540+ subscribers there.  I've made the mailing list announcement-only, and I've given
a few maintainers posting privileges.

This PR adds some notes to the README indicating that the mailing list is only for
announcements.
2023-12-07 19:22:14 +00:00
Brian Van Essen
9f1223e7a3 Bugfix spectrum-mpi module generation (#41466)
* Ensure that additional environment variables are set when a module
file is generated.

* Fixed the detection of the opal_prefix / MPI_ROOT field to use ompi_info.
---------

Co-authored-by: Greg Becker <becker33@llnl.gov>
2023-12-07 11:06:07 -08:00
Vijay M
5beef28444 Update homepage URL, add 5.5.1 version, remove bad version hashes, and other minro changes (#41492) 2023-12-07 10:52:06 -08:00
snehring
e618a93f3d iqtree2: add new version 2.2.2.7 and new variant lsd2 (#41467)
* iqtree2: add new version 2.2.2.7 and new variant lsd2
* iqtree2: reorder variant and resource
2023-12-07 11:30:14 -07:00
Garth N. Wells
3f0ec5c580 Update UFCx for v0.7.0. (#41392) 2023-12-07 10:20:34 -08:00
Kyle Knoepfel
14392efc6d Permit shared-library for libbacktrace (#41454) 2023-12-07 10:17:31 -08:00
John W. Parent
d7406aaaa5 CMake: v3.26.6 (#41282) 2023-12-07 10:25:42 -07:00
Harmen Stoppels
5a7e691ae2 freebsd (#41480) 2023-12-07 09:19:55 -08:00
Dave Keeshan
b9f63ab40b opensta: add new package (#41484)
* Add opensta, is allows 2 variants, zlib and cudd, but they are both enabled by default
* Remove unused import, os
2023-12-07 09:18:58 -08:00
Auriane R
4417b1f9ee Update pika package to use f-strings (#41483) 2023-12-07 10:14:33 -07:00
Adam J. Stewart
04f14166cb py-keras: add v3.0.1 (#41486) 2023-12-07 09:05:42 -08:00
Robert Cohn
223a54098e [intel-mkl,intel-ipp,intel-daal]: deprecate packages (#41488) 2023-12-07 09:01:02 -08:00
Satish Balay
ea505e2d26 petsc: add variant +zoltan (#41472) 2023-12-07 10:51:00 -06:00
Ataf Fazledin Ahamed
e2b51e01be traverse.py: use > 0 instead of >= 0 (#41482)
Signed-off-by: fazledyn-or <ataf@openrefactory.com>
2023-12-07 09:38:54 -07:00
jmlapre
a04ee77f77 trilinos: replace pytrilinos2 variant with python (#41435)
* depend_on python

There is an ill-named variant "python" that enables the pytrilinos1
variant.  This made it through our testing but broke on our actual
CI test machines.

* adjust "python" variant based on Trilinos version

For Trilinos <= 14, enable PyTrilinos(1). For later versions
of Trilinos, enable PyTrilinos2.

We still support directly enabling PyTrilinos2 via the "pytrilinos2"
variant.

* remove pytrilinos2 variant

* correct depends_on constraints
2023-12-07 10:28:13 -05:00
Jordan Galby
bb03ce7281 Do not use depfile in bootstrap (#41458)
- we don't have a fallback if make is not installed
- we assume file system locking works
- we don't verify that make is gnu make (bootstrapping fails on FreeBSD as a result)
- there are some weird race conditions in writing spack.yaml on concurrent spack install
- the view is updated after every package install instead of post environment install.
2023-12-07 10:09:49 +00:00
Massimiliano Culpo
31640652c7 audit: forbid nested dependencies in depends_on declarations (#41428)
Forbid nested dependencies in depends_on declarations, by running an audit in CI.

Fix the packages not passing the new audit:
- amd-aocl
- exago
- palace
- shapemapper
- xsdk-examples

ginkgo: add a commit sha to v1.5.0.glu_experimental
2023-12-07 10:21:01 +01:00
Samuel Browne
0ff0e8944e trilinos: add v15.0.0 (#41465) 2023-12-07 10:07:02 +01:00
Jack Morrison
a877d812d0 rdma-core: Add new versions 41.5, 42.5, 43.4, 44.4, 45.3, 46.2, 47.1, 49.0 (#41473) 2023-12-07 09:58:06 +01:00
dependabot[bot]
24a59ffd36 build(deps): bump actions/setup-python from 4.8.0 to 5.0.0 (#41474)
Bumps [actions/setup-python](https://github.com/actions/setup-python) from 4.8.0 to 5.0.0.
- [Release notes](https://github.com/actions/setup-python/releases)
- [Commits](b64ffcaf5b...0a5c615913)

---
updated-dependencies:
- dependency-name: actions/setup-python
  dependency-type: direct:production
  update-type: version-update:semver-major
...

Signed-off-by: dependabot[bot] <support@github.com>
Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
2023-12-07 09:55:55 +01:00
Dave Keeshan
57f46f0375 cudd: add new package (#41476) 2023-12-07 09:37:22 +01:00
Chris Green
7d45e132a6 [root] New variants, checksum changes, sundry improvements (#41463)
* New variants:
  - `tmvz-cpu`
  - `tmvz-gpu`
  - `tmvz-pymva`
  - `tmvz-sofie`

* Improve X-related dependencies.

* Improve TMVA-related dependencies with more specificity.

* Patch possible missing standard header include in Eve7.

* Patch Protobuf handling to support new Protobuf-provided CMake config
  files required to handle transitive `abseil-cpp` dependence.

* Add missing terminal newline to `webgui` patch to remove patch
  warning.

* Handle deprecated/removed build options.

* Handle unwanted system paths in various `PATH`-like environment
  variables.
2023-12-06 18:39:51 -06:00
Vicente Bolea
e7ac676417 paraview: dropping patch since changes exists (#41462) 2023-12-06 16:18:46 -07:00
Adam J. Stewart
94ba152ef5 py-torchmetrics: add v1.2.1 (#41456) 2023-12-06 12:48:28 -07:00
Massimiliano Culpo
5404a5bb82 llvm: reformulate a when condition to avoid tautology (#41461)
The condition on swig can be interpreted as "true if true,
false if false" and gives clingo the option to add swig
or not.

If not other optimization criteria break the tie, then
the concretization is non-deterministic.
2023-12-06 19:12:42 +01:00
Dave Keeshan
b522d8f610 yosys: add new package (#41416)
* Add EDA tools, yosys to Spack
* Add maintainers
* Move from format to f-strings
2023-12-06 09:47:58 -08:00
Thomas Madlener
2a57c11d28 lcio: add version 2.20.2, sio: add version 0.2 (#41451) 2023-12-06 09:46:18 -08:00
Thomas Madlener
1aa3a641ee edm4hep: Update cmake version dependency for newer versions (#41450) 2023-12-06 09:43:24 -08:00
yizeyi18
6feba1590c nwchem: add libxc/elpa support (#41376)
* added external libxc/elpa choice
* fixed formatting issues and 1 unused variant found by reviewer
* try to fix a string formatting issue
* try to fix some other string formatting issues
* fixed 1 flake8 style issue
* use explicit fftw-api@3
2023-12-06 09:38:46 -08:00
Chris Green
58a7912435 [catch2] Sundry improvements including C++20 support (#41199)
* Add `url_list` to facilitate finding new versions.

* `cxxstd` is not meaningful when `@:2.99.99` as it was a header-only
  package before v3.

* Support C++20/23, remove C++14 support.

* Add @greenc-FNAL to maintainers.

* Add CMake arguments to support testing, build of extras and examples.
2023-12-06 11:07:27 -06:00
yizeyi18
03ae2eb223 dla-future: add a patch (#41409)
* using std::int64_t needs include cstdint in gcc-13

Co-authored-by: Mikael Simberg <mikael.simberg@iki.fi>
2023-12-06 16:55:40 +01:00
Julien Cortial
013f0d3a13 Only build tests for proj package if required (#41065)
* Only build tests for proj package if required

Even if tests are not explictly required to be built, proj build them
anyway and tries to download Google Test.

* proj: fix name of test activation flag

* proj: Always set test activation flag

* proj: Patch test activation logic for versions 5.x
2023-12-06 09:32:39 -06:00
Eric Berquist
3e68aa0b2f py-pre-commit: add 3.5.0 (#41438) 2023-12-06 09:11:32 -06:00
Gavin John
1da0d0342b Add new versions of py-quast (#40788)
* Add new versions of py-quast

* Update hashes

* Add joblib and simplejson

* Fat finger

* Update dependency type
2023-12-06 09:04:17 -06:00
Lydéric Debusschère
6f7d91aebf py-python-pptx: new package (#41315)
* py-python-pptx: new package

* py-python-pptx: use pil instead of pillow, remove version constraint on python

---------

Co-authored-by: LydDeb <lyderic.debusschere@eolen.com>
2023-12-06 08:43:51 -06:00
Lydéric Debusschère
071c74d185 py-tldextract: new package (#41330)
* py-tldextract: new package

* py-tldextract: add version 5.1.1

* py-tldextract: fix version constraint on py-setuptools-scm

---------

Co-authored-by: LydDeb <lyderic.debusschere@eolen.com>
2023-12-06 08:42:48 -06:00
Juan Miguel Carceller
51435d6d69 ruff: add version 0.1.6 (#41355)
* Add a new version of ruff

* Add a comment about where the dependency can be found

---------

Co-authored-by: jmcarcell <jmcarcell@users.noreply.github.com>
2023-12-06 08:41:20 -06:00
Jordan Galby
8ce110e069 bootstrap: Don't catch Ctrl-C (#41449) 2023-12-06 14:58:14 +01:00
Auriane R
90aee11c33 Add pika 0.21.0 release (#41446) 2023-12-06 03:48:26 -07:00
Harmen Stoppels
4fc73bd7f3 minimal support for freebsd (#41434) 2023-12-06 10:27:22 +00:00
Dom Heinzeller
f7fc4b201d Update py-werkzeug version dependency for py-graphene-tornado@2.6.1 (#41426)
* Update py-werkzeug version dependency for py-graphene-tornado@2.6.1

* Add note on diverging version requirements for py-werkzeug in py-graphene-tornado
2023-12-06 10:28:58 +01:00
Jim Edwards
84999b6996 mpiserial: rework installation (#40762) 2023-12-06 09:39:08 +01:00
Harmen Stoppels
b0f193071d bootstrap status: no bash (#41431) 2023-12-06 09:20:59 +01:00
dependabot[bot]
d1c3374ccb build(deps): bump actions/setup-python from 4.7.1 to 4.8.0 (#41441)
Bumps [actions/setup-python](https://github.com/actions/setup-python) from 4.7.1 to 4.8.0.
- [Release notes](https://github.com/actions/setup-python/releases)
- [Commits](65d7f2d534...b64ffcaf5b)

---
updated-dependencies:
- dependency-name: actions/setup-python
  dependency-type: direct:production
  update-type: version-update:semver-minor
...

Signed-off-by: dependabot[bot] <support@github.com>
Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
2023-12-06 09:20:14 +01:00
Richard Berger
cba8ba0466 legion: correct cuda dependency for cr version (#41119)
* legion: correct cuda dependency for cr version
* Update var/spack/repos/builtin/packages/legion/package.py

---------

Co-authored-by: Davis Herring <herring@lanl.gov>
2023-12-05 18:36:50 -08:00
Wouter Deconinck
d50f8d7b19 root: sha256 change on latest versions (#41401)
* root: sha256 change on latest version
* root: sha256 change on 6.28.10
* root: replace 6.26.12 by 6.26.14
* root: hash for 6.26.14
2023-12-05 18:20:27 -08:00
kjrstory
969fbbfb5a foam-extend: add v5.0 (#40480)
* foam-extend:add new version
* depreacted versions
2023-12-05 18:11:59 -08:00
Robert Cohn
1cd5397b12 [intel-parallel-studio] Deprecate entire package (#41430) 2023-12-05 17:56:49 -08:00
psakievich
1829dbd7b6 CDash: Spack dumps stage errors to configure phase (#41436) 2023-12-05 22:05:39 +00:00
Philippe Virouleau
9e3b231e6f julia: fix LLVM paches hashes (#41410) 2023-12-05 22:53:40 +01:00
Alec Scott
5911a677d4 py-gidgethub: add new package (#41286)
* py-gidgethub: add new package

* Add main branch version and scope flit/flit-core dependency

* Update var/spack/repos/builtin/packages/py-gidgethub/package.py

Co-authored-by: Manuela Kuhn <36827019+manuelakuhn@users.noreply.github.com>

* Add optional dependencies as variants of package

* Add git url for main version

* Fix variant and dependency ordering

---------

Co-authored-by: Manuela Kuhn <36827019+manuelakuhn@users.noreply.github.com>
2023-12-05 21:26:42 +01:00
Alec Scott
bb60bb4f7a py-gidgetlab: add new package (#41338)
* gidgetlab: add new package

* Convert both cachetools and aiohttp to optional deps with variants

* Fix forgotten variant conditional on cachetools dependency

* Add git url and main version for dev workflows

* Fix variant and dependency ordering

* Remove cachetools variant and merge dependency with aiohttp variant
2023-12-05 21:24:38 +01:00
Victoria Cherkas
ddec75315e Add maintainers to fdb, eckit, ecbuild, metkit, eccodes (#41433)
* Add maintainers to fdb
* Add maintainers to eckit
* Add maintainers to mekit
* Add maintainers to eccodes
* Add maintainers to ecbuild
* Add climbfuji to eccodes maintainers
2023-12-05 13:18:41 -07:00
Veselin Dobrev
8bcb1f8766 MFEM: Add a patch to fix the +gslib+shared+miniapps build (#41399)
* [mfem] Add a patch to resolve issue #41382

* [mfem] Spack CI wants "patch URL must end with ?full_index=1"
2023-12-05 10:26:48 -08:00
Matthew Thompson
5a0ac4ba94 Update versions of GFE packages (#41429) 2023-12-05 10:24:51 -07:00
Lydéric Debusschère
673689d53b py-sphinx: add versions 7.2.4, 7.2.5 and 7.2.6 (#41411)
Co-authored-by: LydDeb <lyderic.debusschere@eolen.com>
2023-12-05 15:07:22 +01:00
Brian Vanderwende
ace8e17f02 libdap4: add explicit RPC dependency (#40019) 2023-12-05 13:11:19 +01:00
Billae
eb9c63541a documentation: add instructions on how to use external opengl (#40987) 2023-12-05 12:59:41 +01:00
Kensuke WATANABE
b9f4d9f6fc sirius: fix build error with Fujitsu compiler (#41101) 2023-12-05 12:54:03 +01:00
Lydéric Debusschère
eda3522ce8 py-sphinxcontrib-moderncmakedomain: add new package (#41331)
Co-authored-by: LydDeb <lyderic.debusschere@eolen.com>
2023-12-05 12:47:25 +01:00
Harmen Stoppels
3cefd73fcc spack buildcache check: use same interface as push (#41378) 2023-12-05 12:44:50 +01:00
Alberto Invernizzi
3547bcb517 openfoam-org: fix for being able to build manually checked out repository (#41000)
* grep WM_PROJECT_VERSION from etc/bashrc

This fixes the problem when building from a manually checked out repo
which might have a different version wrt the one defined in the spack
package (e.g. anything later than 5.0 is known as 5.x by the build
system)

* patch applies to just 5.0, in newer versions it is already addressed

In `5.20171030` there's a commit

c66fba323c

very similar (almost identical) to what the patch `50-etc.patch` does.

So the patch should not be applied to other than `5.0` otherwise it errors.

References:
- https://github.com/OpenFOAM/OpenFOAM-5.x/commits/20171030/etc/bashrc
- 197d9d3bf2/etc/bashrc (L45-L47)
2023-12-05 12:37:57 +01:00
Todd Gamblin
53b528f649 bugfix: sort variants in spack info --variants-by-name (#41389)
This was missed while backporting the new `spack info` command from #40326.

Variants should be sorted by name when invoking `spack info --variants-by-name`.
2023-12-05 12:31:40 +01:00
Mark W. Krentel
798770f9e5 hpctoolkit: add conflict for recent intel-xed (#41413)
Intel made an incompatible change in XED in 2023.08.21 that breaks
hpctoolkit (at run time).  Hpctoolkit develop can adapt (soon will),
but older versions must use xed :2023.07.09.
2023-12-05 11:17:37 +01:00
Jim Edwards
4a920243a0 cprnc: update sha256 for github artifacts (#41418) 2023-12-05 11:13:14 +01:00
Ben Wibking
8727195b84 openblas: fix macOS build when using XCode 15 or newer (#41420)
Co-authored-by: Harmen Stoppels <harmenstoppels@gmail.com>
2023-12-05 09:53:54 +01:00
Massimiliano Culpo
456f2ca40f extensions: improve docs, fix unit-tests (#41425) 2023-12-05 09:49:35 +01:00
dependabot[bot]
b4258aaa25 build(deps): bump docker/metadata-action from 5.2.0 to 5.3.0 (#41423)
Bumps [docker/metadata-action](https://github.com/docker/metadata-action) from 5.2.0 to 5.3.0.
- [Release notes](https://github.com/docker/metadata-action/releases)
- [Commits](e6428a5c4e...31cebacef4)

---
updated-dependencies:
- dependency-name: docker/metadata-action
  dependency-type: direct:production
  update-type: version-update:semver-minor
...

Signed-off-by: dependabot[bot] <support@github.com>
Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
2023-12-05 09:48:29 +01:00
Mitch B
5d9647544a arrow: add versions up to v14.0.1 (#41424) 2023-12-05 09:48:03 +01:00
Brian Van Essen
1fdb6a3e7e Updating the LBANN, Hydrogen, and DiHydrogen recipes (#41390)
* Updating the LBANN, Hydrogen, and DiHydrogen recipes for both new
variants and to make sure that RPATHs are properly setup.

Co-authored-by: bvanessen <bvanessen@users.noreply.github.com>
2023-12-05 09:31:51 +01:00
Robert Cohn
7c77b3a4b2 [intel] deprecate all versions (#41412)
Deprecating intel package, which contains intel classic compilers. This package has not been updated in 3 years. Please use intel-oneapi-compilers instead.
2023-12-04 21:52:55 -07:00
Ye Luo
eb4b8292b6 A few changes to quantum-espresso (#41225)
* gipaw.x installed by cmake if version >= 5c4a4ce.
  gipaw.x will only be installed with cmake if the qe-gipaw version
  is >= 5c4a4ce. Currently, QE source uses the older f5823521 one.
  Here a patch to the submodule_commit_hash_records to use a newer
  qe-gipaw version.
* Update package.py
* Delete var/spack/repos/builtin/packages/quantum-espresso/gipaw-eccee44.patch
* Update package.py
* Restoring gipaw-eccee44 patch
* Update package.py
* Add fox variant in quantum-espresso
* Fix an issue introduced in #36484. Patches are 7.1 only.
* Change plugin handling.
* formatting.
* Typo correction
* Refine conflict

---------

Co-authored-by: S. Alexis Paz <alexis.paz@gmail.com>
2023-12-04 11:37:05 -08:00
John Biddiscombe
16bc58ea49 Add EGL support to ParaView and Glew (#39800)
* Add EGL support to ParaView and Glew

add a package for egl that provides GL but also adds
EGL libs and headers for projects that need them

Fix a header problem with the opengl package

Format files using black

* better description for egl variant description

Co-authored-by: Vicente Bolea <vicente.bolea@gmail.com>

* better check/setup of non egl variant dependencies

Co-authored-by: Vicente Bolea <vicente.bolea@gmail.com>

* Add biddisco as maintainer

* Fix unused var style warning

* Add egl conflicts for other gl providers

---------

Co-authored-by: Vicente Bolea <vicente.bolea@gmail.com>
2023-12-04 10:53:06 -06:00
Alec Scott
6028ce8bc1 direnv: add v2.33.0 (#41397) 2023-12-04 14:12:13 +01:00
Harmen Stoppels
349e7e4c37 zlib-ng: add v2.1.5 (#41402) 2023-12-04 12:44:10 +01:00
Harmen Stoppels
a982118c1f ci.py: fix missing import (#41391) 2023-12-04 12:14:59 +01:00
Adam J. Stewart
40d12ed7e2 PythonPackage: type hints (#40539)
* PythonPackage: nested config_settings, type hints

* No need to quote PythonPackage

* Use narrower types for now until needed
2023-12-04 10:53:53 +00:00
James Smillie
9e0720207a Windows: fix kit base path and reference to windows registry key (#41388)
* Proper handling of argument passed as semicolon-separated str
* Fix reference to windows registry key in win-wdk
2023-12-03 15:35:13 -08:00
Jaelyn Litzinger
88e738c343 Allow exago to use hiop@develop past v1.0.1 (#41384) 2023-12-02 14:06:22 -06:00
Cameron Rutherford
8bbc2e2ade resolve: add package with cuda and rocm support (#40871) 2023-12-01 20:49:11 -06:00
Julien Cortial
1509e54435 Add MUMPS versions 5.6.0, 5.6.1 and 5.6.2 (#41386)
The patch for version 5.5.x still applies to 5.6.x.
2023-12-01 18:48:00 -07:00
Dom Heinzeller
ca164d6619 Fix curl install using Intel compilers (#41380)
When using Intel to build curl, add 'CFLAGS=-we147' to the configure
args to fix error 'compiler does not halt on function prototype
mismatch'
2023-12-01 17:24:05 -07:00
Felix Werner
a632576231 Add XCDF. (#41379) 2023-12-01 14:56:18 -08:00
Felix Werner
70b16cfb59 Add PhotoSpline. (#41374) 2023-12-01 14:44:53 -08:00
Brian Vanderwende
1d89d4dc13 MET fixes for 11.1 and HDF4 support (#41372)
* MET fixes for 11.1 and HDF4 support
* Fix zlib reference in MET
2023-12-01 14:42:36 -08:00
Dewi
bc8a0f56ed removed cmake build version pointing to fork (#41368) 2023-12-01 14:39:45 -08:00
Jack Morrison
4e09396f8a Libfabric: Introduce OPX provider conflict for v1.20.0 (#41343)
* Libfabric: Introduce OPX provider conflict for v1.20.0
* Add message to libfabric 1.20.0 opx provider conflict
2023-12-01 14:35:54 -08:00
Weiqun Zhang
0d488c6e4f amrex: add v23.12 (#41385) 2023-12-01 22:45:58 +01:00
Erik Heeren
50e76bc3d3 py-pyglet: version bump (#41082)
* py-pyglet: version bump

* py-pyglet: use zip instead of whl, update dependencies

* py-pyglet: 2.0.9 and 2.0.10 zips should be downloaded from github

* py-pyglet: style

* py-pyglet: use virtual packages in dependencies

Co-authored-by: Manuela Kuhn <36827019+manuelakuhn@users.noreply.github.com>

* py-pyglet: doesn't depend on py-future any more

* py-pyglet: remove glx dependency

* py-pyglet: back to the pypi zipfiles with patch instead

---------

Co-authored-by: Manuela Kuhn <36827019+manuelakuhn@users.noreply.github.com>
2023-12-01 21:44:30 +01:00
214 changed files with 2287 additions and 1444 deletions

View File

@@ -23,7 +23,7 @@ jobs:
operating_system: ["ubuntu-latest", "macos-latest"]
steps:
- uses: actions/checkout@b4ffde65f46336ab88eb53be808477a3936bae11 # @v2
- uses: actions/setup-python@65d7f2d534ac1bc67fcd62888c5f4f3d2cb2b236 # @v2
- uses: actions/setup-python@0a5c61591373683505ea898e09a3ea4f39ef2b9c # @v2
with:
python-version: ${{inputs.python_version}}
- name: Install Python packages

View File

@@ -159,7 +159,7 @@ jobs:
brew install cmake bison@2.7 tree
- name: Checkout
uses: actions/checkout@b4ffde65f46336ab88eb53be808477a3936bae11
- uses: actions/setup-python@65d7f2d534ac1bc67fcd62888c5f4f3d2cb2b236 # @v2
- uses: actions/setup-python@0a5c61591373683505ea898e09a3ea4f39ef2b9c # @v2
with:
python-version: "3.12"
- name: Bootstrap clingo

View File

@@ -57,7 +57,7 @@ jobs:
- name: Checkout
uses: actions/checkout@b4ffde65f46336ab88eb53be808477a3936bae11 # @v2
- uses: docker/metadata-action@e6428a5c4e294a61438ed7f43155db912025b6b3
- uses: docker/metadata-action@31cebacef4805868f9ce9a0cb03ee36c32df2ac4
id: docker_meta
with:
images: |

View File

@@ -17,7 +17,7 @@ jobs:
- uses: actions/checkout@b4ffde65f46336ab88eb53be808477a3936bae11
with:
fetch-depth: 0
- uses: actions/setup-python@65d7f2d534ac1bc67fcd62888c5f4f3d2cb2b236
- uses: actions/setup-python@0a5c61591373683505ea898e09a3ea4f39ef2b9c
with:
python-version: 3.9
- name: Install Python packages

View File

@@ -54,7 +54,7 @@ jobs:
- uses: actions/checkout@b4ffde65f46336ab88eb53be808477a3936bae11 # @v2
with:
fetch-depth: 0
- uses: actions/setup-python@65d7f2d534ac1bc67fcd62888c5f4f3d2cb2b236 # @v2
- uses: actions/setup-python@0a5c61591373683505ea898e09a3ea4f39ef2b9c # @v2
with:
python-version: ${{ matrix.python-version }}
- name: Install System packages
@@ -101,7 +101,7 @@ jobs:
- uses: actions/checkout@b4ffde65f46336ab88eb53be808477a3936bae11 # @v2
with:
fetch-depth: 0
- uses: actions/setup-python@65d7f2d534ac1bc67fcd62888c5f4f3d2cb2b236 # @v2
- uses: actions/setup-python@0a5c61591373683505ea898e09a3ea4f39ef2b9c # @v2
with:
python-version: '3.11'
- name: Install System packages
@@ -159,7 +159,7 @@ jobs:
- uses: actions/checkout@b4ffde65f46336ab88eb53be808477a3936bae11 # @v2
with:
fetch-depth: 0
- uses: actions/setup-python@65d7f2d534ac1bc67fcd62888c5f4f3d2cb2b236 # @v2
- uses: actions/setup-python@0a5c61591373683505ea898e09a3ea4f39ef2b9c # @v2
with:
python-version: '3.11'
- name: Install System packages
@@ -194,7 +194,7 @@ jobs:
- uses: actions/checkout@b4ffde65f46336ab88eb53be808477a3936bae11 # @v2
with:
fetch-depth: 0
- uses: actions/setup-python@65d7f2d534ac1bc67fcd62888c5f4f3d2cb2b236 # @v2
- uses: actions/setup-python@0a5c61591373683505ea898e09a3ea4f39ef2b9c # @v2
with:
python-version: ${{ matrix.python-version }}
- name: Install Python packages

View File

@@ -19,7 +19,7 @@ jobs:
runs-on: ubuntu-latest
steps:
- uses: actions/checkout@b4ffde65f46336ab88eb53be808477a3936bae11
- uses: actions/setup-python@65d7f2d534ac1bc67fcd62888c5f4f3d2cb2b236
- uses: actions/setup-python@0a5c61591373683505ea898e09a3ea4f39ef2b9c
with:
python-version: '3.11'
cache: 'pip'
@@ -38,7 +38,7 @@ jobs:
- uses: actions/checkout@b4ffde65f46336ab88eb53be808477a3936bae11
with:
fetch-depth: 0
- uses: actions/setup-python@65d7f2d534ac1bc67fcd62888c5f4f3d2cb2b236
- uses: actions/setup-python@0a5c61591373683505ea898e09a3ea4f39ef2b9c
with:
python-version: '3.11'
cache: 'pip'

View File

@@ -18,7 +18,7 @@ jobs:
- uses: actions/checkout@b4ffde65f46336ab88eb53be808477a3936bae11
with:
fetch-depth: 0
- uses: actions/setup-python@65d7f2d534ac1bc67fcd62888c5f4f3d2cb2b236
- uses: actions/setup-python@0a5c61591373683505ea898e09a3ea4f39ef2b9c
with:
python-version: 3.9
- name: Install Python packages
@@ -42,7 +42,7 @@ jobs:
- uses: actions/checkout@b4ffde65f46336ab88eb53be808477a3936bae11
with:
fetch-depth: 0
- uses: actions/setup-python@65d7f2d534ac1bc67fcd62888c5f4f3d2cb2b236
- uses: actions/setup-python@0a5c61591373683505ea898e09a3ea4f39ef2b9c
with:
python-version: 3.9
- name: Install Python packages
@@ -66,7 +66,7 @@ jobs:
- uses: actions/checkout@b4ffde65f46336ab88eb53be808477a3936bae11
with:
fetch-depth: 0
- uses: actions/setup-python@65d7f2d534ac1bc67fcd62888c5f4f3d2cb2b236
- uses: actions/setup-python@0a5c61591373683505ea898e09a3ea4f39ef2b9c
with:
python-version: 3.9
- name: Install Python packages

View File

@@ -66,10 +66,11 @@ Resources:
* **Matrix space**: [#spack-space:matrix.org](https://matrix.to/#/#spack-space:matrix.org):
[bridged](https://github.com/matrix-org/matrix-appservice-slack#matrix-appservice-slack) to Slack.
* [**Github Discussions**](https://github.com/spack/spack/discussions):
not just for discussions, but also Q&A.
* **Mailing list**: [groups.google.com/d/forum/spack](https://groups.google.com/d/forum/spack)
for Q&A and discussions. Note the pinned discussions for announcements.
* **Twitter**: [@spackpm](https://twitter.com/spackpm). Be sure to
`@mention` us!
* **Mailing list**: [groups.google.com/d/forum/spack](https://groups.google.com/d/forum/spack):
only for announcements. Please use other venues for discussions.
Contributing
------------------------

View File

@@ -9,46 +9,42 @@
Custom Extensions
=================
*Spack extensions* permit you to extend Spack capabilities by deploying your
*Spack extensions* allow you to extend Spack capabilities by deploying your
own custom commands or logic in an arbitrary location on your filesystem.
This might be extremely useful e.g. to develop and maintain a command whose purpose is
too specific to be considered for reintegration into the mainline or to
evolve a command through its early stages before starting a discussion to merge
it upstream.
From Spack's point of view an extension is any path in your filesystem which
respects a prescribed naming and layout for files:
respects the following naming and layout for files:
.. code-block:: console
spack-scripting/ # The top level directory must match the format 'spack-{extension_name}'
├── pytest.ini # Optional file if the extension ships its own tests
├── scripting # Folder that may contain modules that are needed for the extension commands
│   ── cmd # Folder containing extension commands
│   └── filter.py # A new command that will be available
├── tests # Tests for this extension
│   ── cmd # Folder containing extension commands
│   │   └── filter.py # A new command that will be available
│   └── functions.py # Module with internal details
└── tests # Tests for this extension
│ ├── conftest.py
│ └── test_filter.py
└── templates # Templates that may be needed by the extension
In the example above the extension named *scripting* adds an additional command (``filter``)
and unit tests to verify its behavior. The code for this example can be
obtained by cloning the corresponding git repository:
In the example above, the extension is named *scripting*. It adds an additional command
(``spack filter``) and unit tests to verify its behavior.
.. TODO: write an ad-hoc "hello world" extension and make it part of the spack organization
The extension can import any core Spack module in its implementation. When loaded by
the ``spack`` command, the extension itself is imported as a Python package in the
``spack.extensions`` namespace. In the example above, since the extension is named
"scripting", the corresponding Python module is ``spack.extensions.scripting``.
The code for this example extension can be obtained by cloning the corresponding git repository:
.. code-block:: console
$ cd ~/
$ mkdir tmp && cd tmp
$ git clone https://github.com/alalazo/spack-scripting.git
Cloning into 'spack-scripting'...
remote: Counting objects: 11, done.
remote: Compressing objects: 100% (7/7), done.
remote: Total 11 (delta 0), reused 11 (delta 0), pack-reused 0
Receiving objects: 100% (11/11), done.
As you can see by inspecting the sources, Python modules that are part of the extension
can import any core Spack module.
$ git -C /tmp clone https://github.com/spack/spack-scripting.git
---------------------------------
Configure Spack to Use Extensions
@@ -61,7 +57,7 @@ paths to ``config.yaml``. In the case of our example this means ensuring that:
config:
extensions:
- ~/tmp/spack-scripting
- /tmp/spack-scripting
is part of your configuration file. Once this is setup any command that the extension provides
will be available from the command line:
@@ -86,37 +82,32 @@ will be available from the command line:
--implicit select specs that are not installed or were installed implicitly
--output OUTPUT where to dump the result
The corresponding unit tests can be run giving the appropriate options
to ``spack unit-test``:
The corresponding unit tests can be run giving the appropriate options to ``spack unit-test``:
.. code-block:: console
$ spack unit-test --extension=scripting
============================================================== test session starts ===============================================================
platform linux2 -- Python 2.7.15rc1, pytest-3.2.5, py-1.4.34, pluggy-0.4.0
rootdir: /home/mculpo/tmp/spack-scripting, inifile: pytest.ini
========================================== test session starts ===========================================
platform linux -- Python 3.11.5, pytest-7.4.3, pluggy-1.3.0
rootdir: /home/culpo/github/spack-scripting
configfile: pytest.ini
testpaths: tests
plugins: xdist-3.5.0
collected 5 items
tests/test_filter.py ...XX
============================================================ short test summary info =============================================================
XPASS tests/test_filter.py::test_filtering_specs[flags3-specs3-expected3]
XPASS tests/test_filter.py::test_filtering_specs[flags4-specs4-expected4]
tests/test_filter.py ..... [100%]
=========================================================== slowest 20 test durations ============================================================
3.74s setup tests/test_filter.py::test_filtering_specs[flags0-specs0-expected0]
0.17s call tests/test_filter.py::test_filtering_specs[flags3-specs3-expected3]
0.16s call tests/test_filter.py::test_filtering_specs[flags2-specs2-expected2]
0.15s call tests/test_filter.py::test_filtering_specs[flags1-specs1-expected1]
0.13s call tests/test_filter.py::test_filtering_specs[flags4-specs4-expected4]
0.08s call tests/test_filter.py::test_filtering_specs[flags0-specs0-expected0]
0.04s teardown tests/test_filter.py::test_filtering_specs[flags4-specs4-expected4]
0.00s setup tests/test_filter.py::test_filtering_specs[flags4-specs4-expected4]
0.00s setup tests/test_filter.py::test_filtering_specs[flags3-specs3-expected3]
0.00s setup tests/test_filter.py::test_filtering_specs[flags1-specs1-expected1]
0.00s setup tests/test_filter.py::test_filtering_specs[flags2-specs2-expected2]
0.00s teardown tests/test_filter.py::test_filtering_specs[flags2-specs2-expected2]
0.00s teardown tests/test_filter.py::test_filtering_specs[flags1-specs1-expected1]
0.00s teardown tests/test_filter.py::test_filtering_specs[flags0-specs0-expected0]
0.00s teardown tests/test_filter.py::test_filtering_specs[flags3-specs3-expected3]
====================================================== 3 passed, 2 xpassed in 4.51 seconds =======================================================
========================================== slowest 30 durations ==========================================
2.31s setup tests/test_filter.py::test_filtering_specs[kwargs0-specs0-expected0]
0.57s call tests/test_filter.py::test_filtering_specs[kwargs2-specs2-expected2]
0.56s call tests/test_filter.py::test_filtering_specs[kwargs4-specs4-expected4]
0.54s call tests/test_filter.py::test_filtering_specs[kwargs3-specs3-expected3]
0.54s call tests/test_filter.py::test_filtering_specs[kwargs1-specs1-expected1]
0.48s call tests/test_filter.py::test_filtering_specs[kwargs0-specs0-expected0]
0.01s setup tests/test_filter.py::test_filtering_specs[kwargs4-specs4-expected4]
0.01s setup tests/test_filter.py::test_filtering_specs[kwargs2-specs2-expected2]
0.01s setup tests/test_filter.py::test_filtering_specs[kwargs1-specs1-expected1]
0.01s setup tests/test_filter.py::test_filtering_specs[kwargs3-specs3-expected3]
(5 durations < 0.005s hidden. Use -vv to show these durations.)
=========================================== 5 passed in 5.06s ============================================

View File

@@ -111,3 +111,28 @@ CUDA is split into fewer components and is simpler to specify:
prefix: /opt/cuda/cuda-11.0.2/
where ``/opt/cuda/cuda-11.0.2/lib/`` contains ``libcudart.so``.
-----------------------------------
Using an External OpenGL API
-----------------------------------
Depending on whether we have a graphics card or not, we may choose to use OSMesa or GLX to implement the OpenGL API.
If a graphics card is unavailable, OSMesa is recommended and can typically be built with Spack.
However, if we prefer to utilize the system GLX tailored to our graphics card, we need to declare it as an external. Here's how to do it:
.. code-block:: yaml
packages:
libglx:
require: [opengl]
opengl:
buildable: false
externals:
- prefix: /usr/
spec: opengl@4.6
Note that prefix has to be the root of both the libraries and the headers, using is /usr not the path the the lib.
To know which spec for opengl is available use ``cd /usr/include/GL && grep -Ri gl_version``.

View File

@@ -1047,9 +1047,9 @@ def __bool__(self):
"""Whether any exceptions were handled."""
return bool(self.exceptions)
def forward(self, context: str) -> "GroupedExceptionForwarder":
def forward(self, context: str, base: type = BaseException) -> "GroupedExceptionForwarder":
"""Return a contextmanager which extracts tracebacks and prefixes a message."""
return GroupedExceptionForwarder(context, self)
return GroupedExceptionForwarder(context, self, base)
def _receive_forwarded(self, context: str, exc: Exception, tb: List[str]):
self.exceptions.append((context, exc, tb))
@@ -1072,15 +1072,18 @@ class GroupedExceptionForwarder:
"""A contextmanager to capture exceptions and forward them to a
GroupedExceptionHandler."""
def __init__(self, context: str, handler: GroupedExceptionHandler):
def __init__(self, context: str, handler: GroupedExceptionHandler, base: type):
self._context = context
self._handler = handler
self._base = base
def __enter__(self):
return None
def __exit__(self, exc_type, exc_value, tb):
if exc_value is not None:
if not issubclass(exc_type, self._base):
return False
self._handler._receive_forwarded(self._context, exc_value, traceback.format_tb(tb))
# Suppress any exception from being re-raised:

View File

@@ -499,7 +499,7 @@ def _ensure_packages_are_pickeleable(pkgs, error_cls):
@package_properties
def _ensure_packages_are_unparseable(pkgs, error_cls):
"""Ensure that all packages can unparse and that unparsed code is valid Python"""
import spack.package_hash as ph
import spack.util.package_hash as ph
errors = []
for pkg_name in pkgs:
@@ -646,11 +646,7 @@ def _linting_package_file(pkgs, error_cls):
if pkg_cls.homepage.startswith("http://"):
https = re.sub("http", "https", pkg_cls.homepage, 1)
try:
response = urlopen(
https,
verify_ssl=spack.config.get("config:verify_ssl", True),
timeout=spack.config.get("config:connect_timeout", 10),
)
response = urlopen(https)
except Exception as e:
msg = 'Error with attempting https for "{0}": '
errors.append(error_cls(msg.format(pkg_cls.name), [str(e)]))
@@ -730,13 +726,37 @@ def _unknown_variants_in_directives(pkgs, error_cls):
@package_directives
def _unknown_variants_in_dependencies(pkgs, error_cls):
"""Report unknown dependencies and wrong variants for dependencies"""
def _issues_in_depends_on_directive(pkgs, error_cls):
"""Reports issues with 'depends_on' directives.
Issues might be unknown dependencies, unknown variants or variant values, or declaration
of nested dependencies.
"""
errors = []
for pkg_name in pkgs:
pkg_cls = spack.repo.PATH.get_pkg_class(pkg_name)
filename = spack.repo.PATH.filename_for_package_name(pkg_name)
for dependency_name, dependency_data in pkg_cls.dependencies.items():
# Check if there are nested dependencies declared. We don't want directives like:
#
# depends_on('foo+bar ^fee+baz')
#
# but we'd like to have two dependencies listed instead.
for when, dependency_edge in dependency_data.items():
dependency_spec = dependency_edge.spec
nested_dependencies = dependency_spec.dependencies()
if nested_dependencies:
summary = (
f"{pkg_name}: invalid nested dependency "
f"declaration '{str(dependency_spec)}'"
)
details = [
f"split depends_on('{str(dependency_spec)}', when='{str(when)}') "
f"into {len(nested_dependencies) + 1} directives",
f"in {filename}",
]
errors.append(error_cls(summary=summary, details=details))
# No need to analyze virtual packages
if spack.repo.PATH.is_virtual(dependency_name):
continue

View File

@@ -38,14 +38,12 @@
import spack.config as config
import spack.database as spack_db
import spack.error
import spack.gpg
import spack.hooks
import spack.hooks.sbang
import spack.mirror
import spack.oci.image
import spack.oci.oci
import spack.oci.opener
import spack.paths
import spack.platforms
import spack.relocate as relocate
import spack.repo
@@ -54,6 +52,7 @@
import spack.traverse as traverse
import spack.util.crypto
import spack.util.file_cache as file_cache
import spack.util.gpg
import spack.util.path
import spack.util.spack_json as sjson
import spack.util.spack_yaml as syaml
@@ -487,10 +486,7 @@ def _fetch_and_cache_index(self, mirror_url, cache_entry={}):
scheme = urllib.parse.urlparse(mirror_url).scheme
if scheme != "oci" and not web_util.url_exists(
url_util.join(mirror_url, BUILD_CACHE_RELATIVE_PATH, "index.json"),
fetch_method=spack.config.get("config:url_fetch_method", "urllib"),
verify_ssl=spack.config.get("config:verify_ssl"),
timeout=spack.config.get("config:connect_timeout", 10),
url_util.join(mirror_url, BUILD_CACHE_RELATIVE_PATH, "index.json")
):
return False
@@ -536,9 +532,7 @@ def _fetch_and_cache_index(self, mirror_url, cache_entry={}):
def binary_index_location():
"""Set up a BinaryCacheIndex for remote buildcache dbs in the user's homedir."""
cache_root = os.path.join(misc_cache_location(), "indices")
return spack.util.path.canonicalize_path(
cache_root, replacements=spack.paths.path_replacements()
)
return spack.util.path.canonicalize_path(cache_root)
#: Default binary cache index instance
@@ -833,7 +827,7 @@ def tarball_path_name(spec, ext):
def select_signing_key(key=None):
if key is None:
keys = spack.gpg.signing_keys()
keys = spack.util.gpg.signing_keys()
if len(keys) == 1:
key = keys[0]
@@ -858,7 +852,7 @@ def sign_specfile(key, force, specfile_path):
raise NoOverwriteException(signed_specfile_path)
key = select_signing_key(key)
spack.gpg.sign(key, specfile_path, signed_specfile_path, clearsign=True)
spack.util.gpg.sign(key, specfile_path, signed_specfile_path, clearsign=True)
def _read_specs_and_push_index(file_list, read_method, cache_prefix, db, temp_dir, concurrency):
@@ -910,7 +904,6 @@ def _read_specs_and_push_index(file_list, read_method, cache_prefix, db, temp_di
url_util.join(cache_prefix, "index.json"),
keep_original=False,
extra_args={"ContentType": "application/json", "CacheControl": "no-cache"},
verify_ssl=spack.config.get("config:verify_ssl", True),
)
# Push the hash
@@ -919,7 +912,6 @@ def _read_specs_and_push_index(file_list, read_method, cache_prefix, db, temp_di
url_util.join(cache_prefix, "index.json.hash"),
keep_original=False,
extra_args={"ContentType": "text/plain", "CacheControl": "no-cache"},
verify_ssl=spack.config.get("config:verify_ssl", True),
)
@@ -984,13 +976,9 @@ def _specs_from_cache_fallback(cache_prefix):
def url_read_method(url):
contents = None
try:
_, _, spec_file = web_util.read_from_url(
url,
verify_ssl=spack.config.get("config:verify_ssl", True),
timeout=spack.config.get("config:connect_timeout", 10),
)
_, _, spec_file = web_util.read_from_url(url)
contents = codecs.getreader("utf-8")(spec_file).read()
except (URLError, web_util.WebError) as url_err:
except (URLError, web_util.SpackWebError) as url_err:
tty.error("Error reading specfile: {0}".format(url))
tty.error(url_err)
return contents
@@ -998,9 +986,7 @@ def url_read_method(url):
try:
file_list = [
url_util.join(cache_prefix, entry)
for entry in web_util.list_url(
cache_prefix, verify_ssl=spack.config.get("config:verify_ssl", True)
)
for entry in web_util.list_url(cache_prefix)
if entry.endswith("spec.json") or entry.endswith("spec.json.sig")
]
read_fn = url_read_method
@@ -1098,9 +1084,7 @@ def generate_key_index(key_prefix, tmpdir=None):
try:
fingerprints = (
entry[:-4]
for entry in web_util.list_url(
key_prefix, recursive=False, verify_ssl=spack.config.get("config:verify_ssl", True)
)
for entry in web_util.list_url(key_prefix, recursive=False)
if entry.endswith(".pub")
)
except KeyError as inst:
@@ -1137,7 +1121,6 @@ def generate_key_index(key_prefix, tmpdir=None):
url_util.join(key_prefix, "index.json"),
keep_original=False,
extra_args={"ContentType": "application/json"},
verify_ssl=spack.config.get("config:verify_ssl", True),
)
except Exception as err:
msg = "Encountered problem pushing key index to {0}: {1}".format(key_prefix, err)
@@ -1381,18 +1364,10 @@ def _build_tarball_in_stage_dir(spec: Spec, out_url: str, stage_dir: str, option
spackfile_path = os.path.join(cache_prefix, tarball_path_name(spec, ".spack"))
remote_spackfile_path = url_util.join(out_url, os.path.relpath(spackfile_path, stage_dir))
fetch_method = (spack.config.get("config:url_fetch_method", "urllib"),)
verify_ssl = (spack.config.get("config:verify_ssl"),)
timeout = spack.config.get("config:connect_timeout", 10)
url_args = {"fetch_method": fetch_method, "verify_ssl": verify_ssl, "timeout": timeout}
mkdirp(tarfile_dir)
if web_util.url_exists(remote_spackfile_path, **url_args):
if web_util.url_exists(remote_spackfile_path):
if options.force:
web_util.remove_url(
remote_spackfile_path, verify_ssl=spack.config.get("config:verify_ssl", True)
)
web_util.remove_url(remote_spackfile_path)
else:
raise NoOverwriteException(url_util.format(remote_spackfile_path))
@@ -1412,13 +1387,12 @@ def _build_tarball_in_stage_dir(spec: Spec, out_url: str, stage_dir: str, option
# If force and exists, overwrite. Otherwise raise exception on collision.
if options.force:
verify_ssl = spack.config.get("config:verify_ssl", True)
if web_util.url_exists(remote_specfile_path, **url_args):
web_util.remove_url(remote_specfile_path, verify_ssl=verify_ssl)
if web_util.url_exists(remote_signed_specfile_path, **url_args):
web_util.remove_url(remote_signed_specfile_path, verify_ssl=verify_ssl)
elif web_util.url_exists(remote_specfile_path, **url_args) or web_util.url_exists(
remote_signed_specfile_path, **url_args
if web_util.url_exists(remote_specfile_path):
web_util.remove_url(remote_specfile_path)
if web_util.url_exists(remote_signed_specfile_path):
web_util.remove_url(remote_signed_specfile_path)
elif web_util.url_exists(remote_specfile_path) or web_util.url_exists(
remote_signed_specfile_path
):
raise NoOverwriteException(url_util.format(remote_specfile_path))
@@ -1452,17 +1426,11 @@ def _build_tarball_in_stage_dir(spec: Spec, out_url: str, stage_dir: str, option
sign_specfile(key, options.force, specfile_path)
# push tarball and signed spec json to remote mirror
web_util.push_to_url(
spackfile_path,
remote_spackfile_path,
keep_original=False,
verify_ssl=spack.config.get("config:verify_ssl", True),
)
web_util.push_to_url(spackfile_path, remote_spackfile_path, keep_original=False)
web_util.push_to_url(
signed_specfile_path if not options.unsigned else specfile_path,
remote_signed_specfile_path if not options.unsigned else remote_specfile_path,
keep_original=False,
verify_ssl=spack.config.get("config:verify_ssl", True),
)
# push the key to the build cache's _pgp directory so it can be
@@ -1566,7 +1534,7 @@ def try_verify(specfile_path):
suppress = config.get("config:suppress_gpg_warnings", False)
try:
spack.gpg.verify(specfile_path, suppress_warnings=suppress)
spack.util.gpg.verify(specfile_path, suppress_warnings=suppress)
except Exception:
return False
@@ -2037,7 +2005,7 @@ def _extract_inner_tarball(spec, filename, extract_to, unsigned, remote_checksum
if os.path.exists("%s.asc" % specfile_path):
suppress = config.get("config:suppress_gpg_warnings", False)
try:
spack.gpg.verify("%s.asc" % specfile_path, specfile_path, suppress)
spack.util.gpg.verify("%s.asc" % specfile_path, specfile_path, suppress)
except Exception:
raise NoVerifyException(
"Spack was unable to verify package "
@@ -2243,8 +2211,7 @@ def install_root_node(spec, unsigned=False, force=False, sha256=None):
tty.debug("Verified SHA256 checksum of the build cache")
# don't print long padded paths while extracting/relocating binaries
padding = spack.config.get("config:install_tree:padded_length", None)
with spack.util.path.filter_padding(padding=padding):
with spack.util.path.filter_padding():
tty.msg('Installing "{0}" from a buildcache'.format(spec.format()))
extract_tarball(spec, download_result, unsigned, force)
spack.hooks.post_install(spec, False)
@@ -2283,20 +2250,12 @@ def try_direct_fetch(spec, mirrors=None):
mirror.fetch_url, BUILD_CACHE_RELATIVE_PATH, signed_specfile_name
)
try:
_, _, fs = web_util.read_from_url(
buildcache_fetch_url_signed_json,
verify_ssl=spack.config.get("config:verify_ssl", True),
timeout=spack.config.get("config:connect_timeout", 10),
)
_, _, fs = web_util.read_from_url(buildcache_fetch_url_signed_json)
specfile_is_signed = True
except (URLError, web_util.WebError, HTTPError) as url_err:
except (URLError, web_util.SpackWebError, HTTPError) as url_err:
try:
_, _, fs = web_util.read_from_url(
buildcache_fetch_url_json,
verify_ssl=spack.config.get("config:verify_ssl", True),
timeout=spack.config.get("config:connect_timeout", 10),
)
except (URLError, web_util.WebError, HTTPError) as url_err_x:
_, _, fs = web_util.read_from_url(buildcache_fetch_url_json)
except (URLError, web_util.SpackWebError, HTTPError) as url_err_x:
tty.debug(
"Did not find {0} on {1}".format(
specfile_name, buildcache_fetch_url_signed_json
@@ -2400,19 +2359,10 @@ def get_keys(install=False, trust=False, force=False, mirrors=None):
tty.debug("Finding public keys in {0}".format(url_util.format(fetch_url)))
try:
_, _, json_file = web_util.read_from_url(
keys_index,
verify_ssl=spack.config.get("config:verify_ssl", True),
timeout=spack.config.get("config:connect_timeout", 10),
)
_, _, json_file = web_util.read_from_url(keys_index)
json_index = sjson.load(codecs.getreader("utf-8")(json_file))
except (URLError, web_util.WebError) as url_err:
if web_util.url_exists(
keys_index,
fetch_method=spack.config.get("config:url_fetch_method", "urllib"),
verify_ssl=spack.config.get("config:verify_ssl"),
timeout=spack.config.get("config:connect_timeout", 10),
):
except (URLError, web_util.SpackWebError) as url_err:
if web_util.url_exists(keys_index):
err_msg = [
"Unable to find public keys in {0},",
" caught exception attempting to read from {1}.",
@@ -2443,7 +2393,7 @@ def get_keys(install=False, trust=False, force=False, mirrors=None):
tty.debug("Found key {0}".format(fingerprint))
if install:
if trust:
spack.gpg.trust(stage.save_filename)
spack.util.gpg.trust(stage.save_filename)
tty.debug("Added this key to trusted keys.")
else:
tty.debug(
@@ -2461,7 +2411,7 @@ def push_keys(*mirrors, **kwargs):
tmpdir = kwargs.get("tmpdir")
remove_tmpdir = False
keys = spack.gpg.public_keys(*(keys or []))
keys = spack.util.gpg.public_keys(*(keys or []))
try:
for mirror in mirrors:
@@ -2493,7 +2443,7 @@ def push_keys(*mirrors, **kwargs):
export_target = os.path.join(prefix, filename)
# Export public keys (private is set to False)
spack.gpg.export_keys(export_target, [fingerprint])
spack.util.gpg.export_keys(export_target, [fingerprint])
# If mirror is local, the above export writes directly to the
# mirror (export_target points directly to the mirror).
@@ -2502,10 +2452,7 @@ def push_keys(*mirrors, **kwargs):
# uploaded to the mirror.
if not keys_local:
spack.util.web.push_to_url(
export_target,
url_util.join(keys_url, filename),
keep_original=False,
verify_ssl=spack.config.get("config:verify_ssl", True),
export_target, url_util.join(keys_url, filename), keep_original=False
)
if regenerate_index:
@@ -2539,12 +2486,7 @@ def needs_rebuild(spec, mirror_url):
# Only check for the presence of the json version of the spec. If the
# mirror only has the json version, or doesn't have the spec at all, we
# need to rebuild.
return not web_util.url_exists(
specfile_path,
fetch_method=spack.config.get("config:url_fetch_method", "urllib"),
verify_ssl=spack.config.get("config:verify_ssl"),
timeout=spack.config.get("config:connect_timeout", 10),
)
return not web_util.url_exists(specfile_path)
def check_specs_against_mirrors(mirrors, specs, output_file=None):
@@ -2710,11 +2652,7 @@ def get_remote_hash(self):
# Failure to fetch index.json.hash is not fatal
url_index_hash = url_util.join(self.url, BUILD_CACHE_RELATIVE_PATH, "index.json.hash")
try:
response = self.urlopen(
urllib.request.Request(url_index_hash, headers=self.headers),
verify_ssl=spack.config.get("config:verify_ssl", True),
timeout=spack.config.get("config:connect_timeout", 10),
)
response = self.urlopen(urllib.request.Request(url_index_hash, headers=self.headers))
except urllib.error.URLError:
return None
@@ -2736,11 +2674,7 @@ def conditional_fetch(self) -> FetchIndexResult:
url_index = url_util.join(self.url, BUILD_CACHE_RELATIVE_PATH, "index.json")
try:
response = self.urlopen(
urllib.request.Request(url_index, headers=self.headers),
verify_ssl=spack.config.get("config:verify_ssl", True),
timeout=spack.config.get("config:connect_timeout", 10),
)
response = self.urlopen(urllib.request.Request(url_index, headers=self.headers))
except urllib.error.URLError as e:
raise FetchIndexError("Could not fetch index from {}".format(url_index), e) from e
@@ -2788,11 +2722,7 @@ def conditional_fetch(self) -> FetchIndexResult:
}
try:
response = self.urlopen(
urllib.request.Request(url, headers=headers),
verify_ssl=spack.config.get("config:verify_ssl", True),
timeout=spack.config.get("config:connect_timeout", 10),
)
response = self.urlopen(urllib.request.Request(url, headers=headers))
except urllib.error.HTTPError as e:
if e.getcode() == 304:
# Not modified; that means fresh.

View File

@@ -16,6 +16,7 @@
import llnl.util.filesystem as fs
from llnl.util import tty
import spack.platforms
import spack.store
import spack.util.environment
import spack.util.executable
@@ -206,17 +207,19 @@ def _root_spec(spec_str: str) -> str:
"""Add a proper compiler and target to a spec used during bootstrapping.
Args:
spec_str (str): spec to be bootstrapped. Must be without compiler and target.
spec_str: spec to be bootstrapped. Must be without compiler and target.
"""
# Add a proper compiler hint to the root spec. We use GCC for
# everything but MacOS and Windows.
if str(spack.platforms.host()) == "darwin":
# Add a compiler requirement to the root spec.
platform = str(spack.platforms.host())
if platform == "darwin":
spec_str += " %apple-clang"
elif str(spack.platforms.host()) == "windows":
elif platform == "windows":
# TODO (johnwparent): Remove version constraint when clingo patch is up
spec_str += " %msvc@:19.37"
else:
elif platform == "linux":
spec_str += " %gcc"
elif platform == "freebsd":
spec_str += " %clang"
target = archspec.cpu.host().family
spec_str += f" target={target}"

View File

@@ -45,8 +45,7 @@ def spec_for_current_python() -> str:
def root_path() -> str:
"""Root of all the bootstrap related folders"""
return spack.util.path.canonicalize_path(
spack.config.get("bootstrap:root", spack.paths.default_user_bootstrap_path),
replacements=spack.paths.path_replacements(),
spack.config.get("bootstrap:root", spack.paths.default_user_bootstrap_path)
)
@@ -80,16 +79,12 @@ def spack_python_interpreter() -> Generator:
def _store_path() -> str:
bootstrap_root_path = root_path()
return spack.util.path.canonicalize_path(
os.path.join(bootstrap_root_path, "store"), replacements=spack.paths.path_replacements()
)
return spack.util.path.canonicalize_path(os.path.join(bootstrap_root_path, "store"))
def _config_path() -> str:
bootstrap_root_path = root_path()
return spack.util.path.canonicalize_path(
os.path.join(bootstrap_root_path, "config"), replacements=spack.paths.path_replacements()
)
return spack.util.path.canonicalize_path(os.path.join(bootstrap_root_path, "config"))
@contextlib.contextmanager

View File

@@ -92,9 +92,7 @@ class Bootstrapper:
def __init__(self, conf: ConfigDictionary) -> None:
self.conf = conf
self.name = conf["name"]
self.metadata_dir = spack.util.path.canonicalize_path(
conf["metadata"], replacements=spack.paths.path_replacements()
)
self.metadata_dir = spack.util.path.canonicalize_path(conf["metadata"])
# Promote (relative) paths to file urls
url = conf["info"]["url"]
@@ -388,7 +386,7 @@ def ensure_module_importable_or_raise(module: str, abstract_spec: Optional[str]
exception_handler = GroupedExceptionHandler()
for current_config in bootstrapping_sources():
with exception_handler.forward(current_config["name"]):
with exception_handler.forward(current_config["name"], Exception):
source_is_enabled_or_raise(current_config)
current_bootstrapper = create_bootstrapper(current_config)
if current_bootstrapper.try_import(module, abstract_spec):
@@ -443,7 +441,7 @@ def ensure_executables_in_path_or_raise(
exception_handler = GroupedExceptionHandler()
for current_config in bootstrapping_sources():
with exception_handler.forward(current_config["name"]):
with exception_handler.forward(current_config["name"], Exception):
source_is_enabled_or_raise(current_config)
current_bootstrapper = create_bootstrapper(current_config)
if current_bootstrapper.try_search_path(executables, abstract_spec):
@@ -587,9 +585,7 @@ def bootstrapping_sources(scope: Optional[str] = None):
list_of_sources = []
for entry in source_configs:
current = copy.copy(entry)
metadata_dir = spack.util.path.canonicalize_path(
entry["metadata"], replacements=spack.paths.path_replacements()
)
metadata_dir = spack.util.path.canonicalize_path(entry["metadata"])
metadata_yaml = os.path.join(metadata_dir, METADATA_YAML_FILENAME)
with open(metadata_yaml, encoding="utf-8") as stream:
current.update(spack.util.spack_yaml.load(stream))

View File

@@ -16,11 +16,9 @@
from llnl.util import tty
import spack.environment
import spack.paths
import spack.tengine
import spack.util.cpus
import spack.util.executable
from spack.environment import depfile
from ._common import _root_spec
from .config import root_path, spec_for_current_python, store_path
@@ -51,8 +49,7 @@ def environment_root(cls) -> pathlib.Path:
environment_dir = f"{python_part}-{arch_part}-{interpreter_part}"
return pathlib.Path(
spack.util.path.canonicalize_path(
os.path.join(bootstrap_root_path, "environments", environment_dir),
replacements=spack.paths.path_replacements(),
os.path.join(bootstrap_root_path, "environments", environment_dir)
)
)
@@ -88,12 +85,9 @@ def __init__(self) -> None:
super().__init__(self.environment_root())
def update_installations(self) -> None:
"""Update the installations of this environment.
The update is done using a depfile on Linux and macOS, and using the ``install_all``
method of environments on Windows.
"""
with tty.SuppressOutput(msg_enabled=False, warn_enabled=False):
"""Update the installations of this environment."""
log_enabled = tty.is_debug() or tty.is_verbose()
with tty.SuppressOutput(msg_enabled=log_enabled, warn_enabled=log_enabled):
specs = self.concretize()
if specs:
colorized_specs = [
@@ -102,11 +96,9 @@ def update_installations(self) -> None:
]
tty.msg(f"[BOOTSTRAPPING] Installing dependencies ({', '.join(colorized_specs)})")
self.write(regenerate=False)
if sys.platform == "win32":
with tty.SuppressOutput(msg_enabled=log_enabled, warn_enabled=log_enabled):
self.install_all()
else:
self._install_with_depfile()
self.write(regenerate=True)
self.write(regenerate=True)
def update_syspath_and_environ(self) -> None:
"""Update ``sys.path`` and the PATH, PYTHONPATH environment variables to point to
@@ -124,27 +116,6 @@ def update_syspath_and_environ(self) -> None:
+ [str(x) for x in self.pythonpaths()]
)
def _install_with_depfile(self) -> None:
model = depfile.MakefileModel.from_env(self)
template = spack.tengine.make_environment().get_template(
os.path.join("depfile", "Makefile")
)
makefile = self.environment_root() / "Makefile"
makefile.write_text(template.render(model.to_dict()))
make = spack.util.executable.which("make")
kwargs = {}
if not tty.is_debug():
kwargs = {"output": os.devnull, "error": os.devnull}
make(
"-C",
str(self.environment_root()),
"-j",
str(
spack.util.cpus.determine_number_of_jobs(parallel=True, config=spack.config.CONFIG)
),
**kwargs,
)
def _write_spack_yaml_file(self) -> None:
tty.msg(
"[BOOTSTRAPPING] Spack has missing dependencies, creating a bootstrapping environment"

View File

@@ -66,7 +66,6 @@ def _core_requirements() -> List[RequiredResponseType]:
_core_system_exes = {
"make": _missing("make", "required to build software from sources"),
"patch": _missing("patch", "required to patch source code before building"),
"bash": _missing("bash", "required for Spack compiler wrapper"),
"tar": _missing("tar", "required to manage code archives"),
"gzip": _missing("gzip", "required to compress/decompress code archives"),
"unzip": _missing("unzip", "required to compress/decompress code archives"),

View File

@@ -9,6 +9,7 @@
import llnl.util.filesystem as fs
import llnl.util.tty as tty
import spack.build_environment
import spack.builder
from .cmake import CMakeBuilder, CMakePackage
@@ -285,6 +286,19 @@ def initconfig_hardware_entries(self):
def std_initconfig_entries(self):
cmake_prefix_path_env = os.environ["CMAKE_PREFIX_PATH"]
cmake_prefix_path = cmake_prefix_path_env.replace(os.pathsep, ";")
cmake_rpaths_env = spack.build_environment.get_rpaths(self.pkg)
cmake_rpaths_path = ";".join(cmake_rpaths_env)
complete_rpath_list = cmake_rpaths_path
if "SPACK_COMPILER_EXTRA_RPATHS" in os.environ:
spack_extra_rpaths_env = os.environ["SPACK_COMPILER_EXTRA_RPATHS"]
spack_extra_rpaths_path = spack_extra_rpaths_env.replace(os.pathsep, ";")
complete_rpath_list = "{0};{1}".format(complete_rpath_list, spack_extra_rpaths_path)
if "SPACK_COMPILER_IMPLICIT_RPATHS" in os.environ:
spack_implicit_rpaths_env = os.environ["SPACK_COMPILER_IMPLICIT_RPATHS"]
spack_implicit_rpaths_path = spack_implicit_rpaths_env.replace(os.pathsep, ";")
complete_rpath_list = "{0};{1}".format(complete_rpath_list, spack_implicit_rpaths_path)
return [
"#------------------{0}".format("-" * 60),
"# !!!! This is a generated file, edit at own risk !!!!",
@@ -292,6 +306,9 @@ def std_initconfig_entries(self):
"# CMake executable path: {0}".format(self.pkg.spec["cmake"].command.path),
"#------------------{0}\n".format("-" * 60),
cmake_cache_string("CMAKE_PREFIX_PATH", cmake_prefix_path),
cmake_cache_string("CMAKE_INSTALL_RPATH_USE_LINK_PATH", "ON"),
cmake_cache_string("CMAKE_BUILD_RPATH", complete_rpath_list),
cmake_cache_string("CMAKE_INSTALL_RPATH", complete_rpath_list),
self.define_cmake_cache_from_variant("CMAKE_BUILD_TYPE", "build_type"),
]

View File

@@ -6,13 +6,14 @@
import os
import re
import shutil
from typing import Optional
from typing import Iterable, List, Mapping, Optional
import archspec
import llnl.util.filesystem as fs
import llnl.util.lang as lang
import llnl.util.tty as tty
from llnl.util.filesystem import HeaderList, LibraryList
import spack.builder
import spack.config
@@ -25,14 +26,18 @@
from spack.directives import build_system, depends_on, extends, maintainers
from spack.error import NoHeadersError, NoLibrariesError
from spack.install_test import test_part
from spack.spec import Spec
from spack.util.prefix import Prefix
from ._checks import BaseBuilder, execute_install_time_tests
def _flatten_dict(dictionary):
def _flatten_dict(dictionary: Mapping[str, object]) -> Iterable[str]:
"""Iterable that yields KEY=VALUE paths through a dictionary.
Args:
dictionary: Possibly nested dictionary of arbitrary keys and values.
Yields:
A single path through the dictionary.
"""
@@ -50,7 +55,7 @@ class PythonExtension(spack.package_base.PackageBase):
maintainers("adamjstewart")
@property
def import_modules(self):
def import_modules(self) -> Iterable[str]:
"""Names of modules that the Python package provides.
These are used to test whether or not the installation succeeded.
@@ -65,7 +70,7 @@ def import_modules(self):
detected, this property can be overridden by the package.
Returns:
list: list of strings of module names
List of strings of module names.
"""
modules = []
pkg = self.spec["python"].package
@@ -102,14 +107,14 @@ def import_modules(self):
return modules
@property
def skip_modules(self):
def skip_modules(self) -> Iterable[str]:
"""Names of modules that should be skipped when running tests.
These are a subset of import_modules. If a module has submodules,
they are skipped as well (meaning a.b is skipped if a is contained).
Returns:
list: list of strings of module names
List of strings of module names.
"""
return []
@@ -185,12 +190,12 @@ def remove_files_from_view(self, view, merge_map):
view.remove_files(to_remove)
def test_imports(self):
def test_imports(self) -> None:
"""Attempts to import modules of the installed package."""
# Make sure we are importing the installed modules,
# not the ones in the source directory
python = inspect.getmodule(self).python
python = inspect.getmodule(self).python # type: ignore[union-attr]
for module in self.import_modules:
with test_part(
self,
@@ -315,24 +320,27 @@ class PythonPackage(PythonExtension):
py_namespace: Optional[str] = None
@lang.classproperty
def homepage(cls):
def homepage(cls) -> Optional[str]: # type: ignore[override]
if cls.pypi:
name = cls.pypi.split("/")[0]
return "https://pypi.org/project/" + name + "/"
return f"https://pypi.org/project/{name}/"
return None
@lang.classproperty
def url(cls):
def url(cls) -> Optional[str]:
if cls.pypi:
return "https://files.pythonhosted.org/packages/source/" + cls.pypi[0] + "/" + cls.pypi
return f"https://files.pythonhosted.org/packages/source/{cls.pypi[0]}/{cls.pypi}"
return None
@lang.classproperty
def list_url(cls):
def list_url(cls) -> Optional[str]: # type: ignore[override]
if cls.pypi:
name = cls.pypi.split("/")[0]
return "https://pypi.org/simple/" + name + "/"
return f"https://pypi.org/simple/{name}/"
return None
@property
def headers(self):
def headers(self) -> HeaderList:
"""Discover header files in platlib."""
# Remove py- prefix in package name
@@ -350,7 +358,7 @@ def headers(self):
raise NoHeadersError(msg.format(self.spec.name, include, platlib))
@property
def libs(self):
def libs(self) -> LibraryList:
"""Discover libraries in platlib."""
# Remove py- prefix in package name
@@ -384,7 +392,7 @@ class PythonPipBuilder(BaseBuilder):
install_time_test_callbacks = ["test"]
@staticmethod
def std_args(cls):
def std_args(cls) -> List[str]:
return [
# Verbose
"-vvv",
@@ -409,7 +417,7 @@ def std_args(cls):
]
@property
def build_directory(self):
def build_directory(self) -> str:
"""The root directory of the Python package.
This is usually the directory containing one of the following files:
@@ -420,51 +428,51 @@ def build_directory(self):
"""
return self.pkg.stage.source_path
def config_settings(self, spec, prefix):
def config_settings(self, spec: Spec, prefix: Prefix) -> Mapping[str, object]:
"""Configuration settings to be passed to the PEP 517 build backend.
Requires pip 22.1 or newer for keys that appear only a single time,
or pip 23.1 or newer if the same key appears multiple times.
Args:
spec (spack.spec.Spec): build spec
prefix (spack.util.prefix.Prefix): installation prefix
spec: Build spec.
prefix: Installation prefix.
Returns:
dict: Possibly nested dictionary of KEY, VALUE settings
Possibly nested dictionary of KEY, VALUE settings.
"""
return {}
def install_options(self, spec, prefix):
def install_options(self, spec: Spec, prefix: Prefix) -> Iterable[str]:
"""Extra arguments to be supplied to the setup.py install command.
Requires pip 23.0 or older.
Args:
spec (spack.spec.Spec): build spec
prefix (spack.util.prefix.Prefix): installation prefix
spec: Build spec.
prefix: Installation prefix.
Returns:
list: list of options
List of options.
"""
return []
def global_options(self, spec, prefix):
def global_options(self, spec: Spec, prefix: Prefix) -> Iterable[str]:
"""Extra global options to be supplied to the setup.py call before the install
or bdist_wheel command.
Deprecated in pip 23.1.
Args:
spec (spack.spec.Spec): build spec
prefix (spack.util.prefix.Prefix): installation prefix
spec: Build spec.
prefix: Installation prefix.
Returns:
list: list of options
List of options.
"""
return []
def install(self, pkg, spec, prefix):
def install(self, pkg: PythonPackage, spec: Spec, prefix: Prefix) -> None:
"""Install everything from build directory."""
args = PythonPipBuilder.std_args(pkg) + [f"--prefix={prefix}"]

View File

@@ -10,7 +10,6 @@
import llnl.util.tty as tty
import spack.builder
import spack.config
from spack.build_environment import SPACK_NO_PARALLEL_MAKE
from spack.directives import build_system, extends, maintainers
from spack.package_base import PackageBase
@@ -94,7 +93,7 @@ def install(self, pkg, spec, prefix):
"--copy",
"-i",
"-j",
str(determine_number_of_jobs(parallel=parallel, config=spack.config.CONFIG)),
str(determine_number_of_jobs(parallel=parallel)),
"--",
os.getcwd(),
]

View File

@@ -26,7 +26,7 @@ def misc_cache_location():
providers and for which packages provide which tags.
"""
path = spack.config.get("config:misc_cache", spack.paths.default_misc_cache_path)
return spack.util.path.canonicalize_path(path, replacements=spack.paths.path_replacements())
return spack.util.path.canonicalize_path(path)
def _misc_cache():
@@ -49,7 +49,7 @@ def fetch_cache_location():
path = spack.config.get("config:source_cache")
if not path:
path = spack.paths.default_fetch_cache_path
path = spack.util.path.canonicalize_path(path, replacements=spack.paths.path_replacements())
path = spack.util.path.canonicalize_path(path)
return path

View File

@@ -31,13 +31,13 @@
import spack.binary_distribution as bindist
import spack.config as cfg
import spack.environment as ev
import spack.gpg
import spack.main
import spack.mirror
import spack.paths
import spack.repo
import spack.spec
import spack.util.git
import spack.util.gpg as gpg_util
import spack.util.spack_yaml as syaml
import spack.util.url as url_util
import spack.util.web as web_util
@@ -1454,13 +1454,13 @@ def can_sign_binaries():
"""Utility method to determine if this spack instance is capable of
signing binary packages. This is currently only possible if the
spack gpg keystore contains exactly one secret key."""
return len(spack.gpg.signing_keys()) == 1
return len(gpg_util.signing_keys()) == 1
def can_verify_binaries():
"""Utility method to determin if this spack instance is capable (at
least in theory) of verifying signed binaries."""
return len(spack.gpg.public_keys()) >= 1
return len(gpg_util.public_keys()) >= 1
def _push_mirror_contents(input_spec, sign_binaries, mirror_url):
@@ -1756,11 +1756,7 @@ def reproduce_ci_job(url, work_dir, autostart, gpg_url, runtime):
gpg_path = None
if gpg_url:
gpg_path = web_util.fetch_url_text(
gpg_url,
dest_dir=os.path.join(work_dir, "_pgp"),
fetch_method=spack.config.get("config:url_fetch_method"),
)
gpg_path = web_util.fetch_url_text(gpg_url, dest_dir=os.path.join(work_dir, "_pgp"))
rel_gpg_path = gpg_path.replace(work_dir, "").lstrip(os.path.sep)
lock_file = fs.find(work_dir, "spack.lock")[0]
@@ -2117,11 +2113,7 @@ def write_broken_spec(url, pkg_name, stack_name, job_url, pipeline_url, spec_dic
with open(file_path, "w") as fd:
fd.write(syaml.dump(broken_spec_details))
web_util.push_to_url(
file_path,
url,
keep_original=False,
extra_args={"ContentType": "text/plain"},
verify_ssl=spack.config.get("config:verify_ssl", True),
file_path, url, keep_original=False, extra_args={"ContentType": "text/plain"}
)
except Exception as err:
# If there is an S3 error (e.g., access denied or connection
@@ -2138,12 +2130,8 @@ def read_broken_spec(broken_spec_url):
object.
"""
try:
_, _, fs = web_util.read_from_url(
broken_spec_url,
verify_ssl=cfg.get("config:verify_ssl", True),
timeout=cfg.get("config:connect_timeout", 10),
)
except (URLError, web_util.WebError, HTTPError):
_, _, fs = web_util.read_from_url(broken_spec_url)
except (URLError, web_util.SpackWebError, HTTPError):
tty.warn("Unable to read broken spec from {0}".format(broken_spec_url))
return None

View File

@@ -18,7 +18,6 @@
import spack.config
import spack.main
import spack.mirror
import spack.paths
import spack.spec
import spack.stage
import spack.util.path
@@ -192,9 +191,7 @@ def _root(args):
root = spack.config.get("bootstrap:root", default=None, scope=args.scope)
if root:
root = spack.util.path.canonicalize_path(
root, replacements=spack.paths.path_replacements()
)
root = spack.util.path.canonicalize_path(root)
print(root)
@@ -338,9 +335,7 @@ def _add(args):
raise RuntimeError(msg.format(args.name))
# Check that the metadata file exists
metadata_dir = spack.util.path.canonicalize_path(
args.metadata_dir, replacements=spack.paths.path_replacements()
)
metadata_dir = spack.util.path.canonicalize_path(args.metadata_dir)
if not os.path.exists(metadata_dir) or not os.path.isdir(metadata_dir):
raise RuntimeError('the directory "{0}" does not exist'.format(args.metadata_dir))
@@ -389,9 +384,7 @@ def _remove(args):
def _mirror(args):
mirror_dir = spack.util.path.canonicalize_path(
os.path.join(args.root_dir, LOCAL_MIRROR_DIR), replacements=spack.paths.path_replacements()
)
mirror_dir = spack.util.path.canonicalize_path(os.path.join(args.root_dir, LOCAL_MIRROR_DIR))
# TODO: Here we are adding gnuconfig manually, but this can be fixed
# TODO: as soon as we have an option to add to a mirror all the possible
@@ -440,24 +433,9 @@ def write_metadata(subdir, metadata):
instructions += cmd.format("local-sources", rel_directory)
if args.binary_packages:
abs_directory, rel_directory = write_metadata(subdir="binaries", metadata=BINARY_METADATA)
shutil.copy(
spack.util.path.canonicalize_path(
CLINGO_JSON, replacements=spack.paths.path_replacements()
),
abs_directory,
)
shutil.copy(
spack.util.path.canonicalize_path(
GNUPG_JSON, replacements=spack.paths.path_replacements()
),
abs_directory,
)
shutil.copy(
spack.util.path.canonicalize_path(
PATCHELF_JSON, replacements=spack.paths.path_replacements()
),
abs_directory,
)
shutil.copy(spack.util.path.canonicalize_path(CLINGO_JSON), abs_directory)
shutil.copy(spack.util.path.canonicalize_path(GNUPG_JSON), abs_directory)
shutil.copy(spack.util.path.canonicalize_path(PATCHELF_JSON), abs_directory)
instructions += cmd.format("local-binaries", rel_directory)
print(instructions)

View File

@@ -188,14 +188,16 @@ def setup_parser(subparser: argparse.ArgumentParser):
default=lambda: spack.config.default_modify_scope(),
help="configuration scope containing mirrors to check",
)
check_spec_or_specfile = check.add_mutually_exclusive_group(required=True)
check_spec_or_specfile.add_argument(
# Unfortunately there are 3 ways to do the same thing here:
check_specs = check.add_mutually_exclusive_group()
check_specs.add_argument(
"-s", "--spec", help="check single spec instead of release specs file"
)
check_spec_or_specfile.add_argument(
check_specs.add_argument(
"--spec-file",
help="check single spec from json or yaml file instead of release specs file",
)
arguments.add_common_arguments(check, ["specs"])
check.set_defaults(func=check_fn)
@@ -813,15 +815,24 @@ def check_fn(args: argparse.Namespace):
exit code is non-zero, then at least one of the indicated specs needs to be rebuilt
"""
if args.spec_file:
specs_arg = (
args.spec_file if os.path.sep in args.spec_file else os.path.join(".", args.spec_file)
)
tty.warn(
"The flag `--spec-file` is deprecated and will be removed in Spack 0.22. "
"Use --spec instead."
f"Use `spack buildcache check {specs_arg}` instead."
)
elif args.spec:
specs_arg = args.spec
tty.warn(
"The flag `--spec` is deprecated and will be removed in Spack 0.23. "
f"Use `spack buildcache check {specs_arg}` instead."
)
else:
specs_arg = args.specs
specs = spack.cmd.parse_specs(args.spec or args.spec_file)
if specs:
specs = _matching_specs(specs)
if specs_arg:
specs = _matching_specs(spack.cmd.parse_specs(specs_arg))
else:
specs = spack.cmd.require_active_env("buildcache check").all_specs()
@@ -918,12 +929,7 @@ def copy_buildcache_file(src_url, dest_url, local_path=None):
try:
temp_stage.create()
temp_stage.fetch()
web_util.push_to_url(
local_path,
dest_url,
keep_original=True,
verify_ssl=spack.config.get("config:verify_ssl", True),
)
web_util.push_to_url(local_path, dest_url, keep_original=True)
except spack.error.FetchError as e:
# Expected, since we have to try all the possible extensions
tty.debug("no such file: {0}".format(src_url))

View File

@@ -11,7 +11,6 @@
from llnl.util import tty
import spack.cmd
import spack.config
import spack.repo
import spack.spec
import spack.stage
@@ -276,4 +275,4 @@ def add_versions_to_package(pkg: PackageBase, version_lines: str):
tty.msg(f"Open {filename} to review the additions.")
if sys.stdout.isatty():
editor(filename, debug=spack.config.get("config:debug"))
editor(filename)

View File

@@ -16,9 +16,10 @@
import spack.cmd.buildcache as buildcache
import spack.config as cfg
import spack.environment as ev
import spack.gpg
import spack.environment.depfile
import spack.hash_types as ht
import spack.mirror
import spack.util.gpg as gpg_util
import spack.util.timer as timer
import spack.util.url as url_util
import spack.util.web as web_util
@@ -305,7 +306,7 @@ def ci_rebuild(args):
# Fail early if signing is required but we don't have a signing key
sign_binaries = require_signing is not None and require_signing.lower() == "true"
if sign_binaries and not spack_ci.can_sign_binaries():
spack.gpg.list(False, True)
gpg_util.list(False, True)
tty.die("SPACK_REQUIRE_SIGNING=True => spack must have exactly one signing key")
# Construct absolute paths relative to current $CI_PROJECT_DIR
@@ -606,7 +607,9 @@ def ci_rebuild(args):
"SPACK_INSTALL_FLAGS={}".format(args_to_string(deps_install_args)),
"-j$(nproc)",
"install-deps/{}".format(
ev.depfile.MakefileSpec(job_spec).safe_format("{name}-{version}-{hash}")
spack.environment.depfile.MakefileSpec(job_spec).safe_format(
"{name}-{version}-{hash}"
)
),
],
spack_cmd + ["install"] + root_install_args,
@@ -730,17 +733,10 @@ def ci_rebuild(args):
broken_specs_url = ci_config["broken-specs-url"]
just_built_hash = job_spec.dag_hash()
broken_spec_path = url_util.join(broken_specs_url, just_built_hash)
if web_util.url_exists(
broken_spec_path,
fetch_method=cfg.get("config:url_fetch_method", "urllib"),
verify_ssl=cfg.get("config:verify_ssl"),
timeout=cfg.get("config:connect_timeout", 10),
):
if web_util.url_exists(broken_spec_path):
tty.msg("Removing {0} from the list of broken specs".format(broken_spec_path))
try:
web_util.remove_url(
broken_spec_path, verify_ssl=cfg.get("config:verify_ssl", True)
)
web_util.remove_url(broken_spec_path)
except Exception as err:
# If there is an S3 error (e.g., access denied or connection
# error), the first non boto-specific class in the exception

View File

@@ -14,7 +14,6 @@
import spack.caches
import spack.cmd.test
import spack.config
import spack.paths
import spack.repo
import spack.stage
import spack.store
@@ -134,9 +133,7 @@ def clean(parser, args):
remove_python_cache()
if args.bootstrap:
bootstrap_prefix = spack.util.path.canonicalize_path(
spack.config.get("bootstrap:root"), replacements=spack.paths.path_replacements()
)
bootstrap_prefix = spack.util.path.canonicalize_path(spack.config.get("bootstrap:root"))
msg = 'Removing bootstrapped software and configuration in "{0}"'
tty.msg(msg.format(bootstrap_prefix))
llnl.util.filesystem.remove_directory_contents(bootstrap_prefix)

View File

@@ -180,7 +180,7 @@ def config_edit(args):
if args.print_file:
print(config_file)
else:
editor(config_file, debug=spack.config.get("config:debug"))
editor(config_file)
def config_list(args):

View File

@@ -11,7 +11,6 @@
import llnl.util.tty as tty
from llnl.util.filesystem import mkdirp
import spack.config
import spack.repo
import spack.stage
import spack.util.web
@@ -987,4 +986,4 @@ def create(parser, args):
# Optionally open up the new package file in your $EDITOR
if not args.skip_editor:
editor(pkg_path, debug=spack.config.get("config:debug"))
editor(pkg_path)

View File

@@ -8,7 +8,6 @@
import llnl.util.tty as tty
import spack.cmd
import spack.paths
import spack.spec
import spack.util.path
import spack.version
@@ -56,9 +55,7 @@ def develop(parser, args):
# download all dev specs
for name, entry in env.dev_specs.items():
path = entry.get("path", name)
abspath = spack.util.path.canonicalize_path(
path, default_wd=env.path, replacements=spack.paths.path_replacements()
)
abspath = spack.util.path.canonicalize_path(path, default_wd=env.path)
if os.path.exists(abspath):
msg = "Skipping developer download of %s" % entry["spec"]
@@ -89,9 +86,7 @@ def develop(parser, args):
# default path is relative path to spec.name
path = args.path or spec.name
abspath = spack.util.path.canonicalize_path(
path, default_wd=env.path, replacements=spack.paths.path_replacements()
)
abspath = spack.util.path.canonicalize_path(path, default_wd=env.path)
# clone default: only if the path doesn't exist
clone = args.clone

View File

@@ -9,7 +9,6 @@
import llnl.util.tty as tty
import spack.cmd
import spack.config
import spack.paths
import spack.repo
from spack.spec import Spec
@@ -46,7 +45,7 @@ def edit_package(name, repo_path, namespace):
else:
raise spack.repo.UnknownPackageError(spec.name)
editor(path, debug=spack.config.get("config:debug"))
editor(path)
def setup_parser(subparser):

View File

@@ -7,9 +7,9 @@
import os
import spack.binary_distribution
import spack.gpg
import spack.mirror
import spack.paths
import spack.util.gpg
import spack.util.url
from spack.cmd.common import arguments
@@ -129,38 +129,40 @@ def setup_parser(subparser):
def gpg_create(args):
"""create a new key"""
if args.export or args.secret:
old_sec_keys = spack.gpg.signing_keys()
old_sec_keys = spack.util.gpg.signing_keys()
# Create the new key
spack.gpg.create(name=args.name, email=args.email, comment=args.comment, expires=args.expires)
spack.util.gpg.create(
name=args.name, email=args.email, comment=args.comment, expires=args.expires
)
if args.export or args.secret:
new_sec_keys = set(spack.gpg.signing_keys())
new_sec_keys = set(spack.util.gpg.signing_keys())
new_keys = new_sec_keys.difference(old_sec_keys)
if args.export:
spack.gpg.export_keys(args.export, new_keys)
spack.util.gpg.export_keys(args.export, new_keys)
if args.secret:
spack.gpg.export_keys(args.secret, new_keys, secret=True)
spack.util.gpg.export_keys(args.secret, new_keys, secret=True)
def gpg_export(args):
"""export a gpg key, optionally including secret key"""
keys = args.keys
if not keys:
keys = spack.gpg.signing_keys()
spack.gpg.export_keys(args.location, keys, args.secret)
keys = spack.util.gpg.signing_keys()
spack.util.gpg.export_keys(args.location, keys, args.secret)
def gpg_list(args):
"""list keys available in the keyring"""
spack.gpg.list(args.trusted, args.signing)
spack.util.gpg.list(args.trusted, args.signing)
def gpg_sign(args):
"""sign a package"""
key = args.key
if key is None:
keys = spack.gpg.signing_keys()
keys = spack.util.gpg.signing_keys()
if len(keys) == 1:
key = keys[0]
elif not keys:
@@ -171,12 +173,12 @@ def gpg_sign(args):
if not output:
output = args.spec[0] + ".asc"
# TODO: Support the package format Spack creates.
spack.gpg.sign(key, " ".join(args.spec), output, args.clearsign)
spack.util.gpg.sign(key, " ".join(args.spec), output, args.clearsign)
def gpg_trust(args):
"""add a key to the keyring"""
spack.gpg.trust(args.keyfile)
spack.util.gpg.trust(args.keyfile)
def gpg_init(args):
@@ -189,12 +191,12 @@ def gpg_init(args):
for filename in filenames:
if not filename.endswith(".key"):
continue
spack.gpg.trust(os.path.join(root, filename))
spack.util.gpg.trust(os.path.join(root, filename))
def gpg_untrust(args):
"""remove a key from the keyring"""
spack.gpg.untrust(args.signing, *args.keys)
spack.util.gpg.untrust(args.signing, *args.keys)
def gpg_verify(args):
@@ -203,7 +205,7 @@ def gpg_verify(args):
signature = args.signature
if signature is None:
signature = args.spec[0] + ".asc"
spack.gpg.verify(signature, " ".join(args.spec))
spack.util.gpg.verify(signature, " ".join(args.spec))
def gpg_publish(args):

View File

@@ -327,7 +327,7 @@ def _variants_by_name_when(pkg):
"""Adaptor to get variants keyed by { name: { when: { [Variant...] } }."""
# TODO: replace with pkg.variants_by_name(when=True) when unified directive dicts are merged.
variants = {}
for name, (variant, whens) in pkg.variants.items():
for name, (variant, whens) in sorted(pkg.variants.items()):
for when in whens:
variants.setdefault(name, {}).setdefault(when, []).append(variant)
return variants

View File

@@ -495,9 +495,7 @@ def mirror_destroy(args):
elif args.mirror_url:
mirror_url = args.mirror_url
web_util.remove_url(
mirror_url, recursive=True, verify_ssl=spack.config.get("config:verify_ssl", True)
)
web_util.remove_url(mirror_url, recursive=True)
def mirror(parser, args):

View File

@@ -12,10 +12,10 @@
from llnl.util.tty.colify import colify
import spack.cmd
import spack.package_hash as ph
import spack.paths
import spack.repo
import spack.util.executable as exe
import spack.util.package_hash as ph
from spack.cmd.common import arguments
description = "query packages associated with particular git revisions"

View File

@@ -9,7 +9,6 @@
import llnl.util.tty as tty
import spack.config
import spack.paths
import spack.repo
import spack.util.path
from spack.cmd.common import arguments
@@ -84,9 +83,7 @@ def repo_add(args):
path = args.path
# real_path is absolute and handles substitution.
canon_path = spack.util.path.canonicalize_path(
path, replacements=spack.paths.path_replacements()
)
canon_path = spack.util.path.canonicalize_path(path)
# check if the path exists
if not os.path.exists(canon_path):
@@ -118,13 +115,9 @@ def repo_remove(args):
namespace_or_path = args.namespace_or_path
# If the argument is a path, remove that repository from config.
canon_path = spack.util.path.canonicalize_path(
namespace_or_path, replacements=spack.paths.path_replacements()
)
canon_path = spack.util.path.canonicalize_path(namespace_or_path)
for repo_path in repos:
repo_canon_path = spack.util.path.canonicalize_path(
repo_path, replacements=spack.paths.path_replacements()
)
repo_canon_path = spack.util.path.canonicalize_path(repo_path)
if canon_path == repo_canon_path:
repos.remove(repo_path)
spack.config.set("repos", repos, args.scope)

View File

@@ -11,9 +11,9 @@
import spack
import spack.config
import spack.gpg
import spack.paths
import spack.util.git
import spack.util.gpg
from spack.cmd.common import arguments
from spack.util.spack_yaml import syaml_dict
@@ -76,7 +76,7 @@ def tutorial(parser, args):
spack.config.set("mirrors", mirror_config, scope="user")
tty.msg("Ensuring that we trust tutorial binaries", f"spack gpg trust {tutorial_key}")
spack.gpg.trust(tutorial_key)
spack.util.gpg.trust(tutorial_key)
# Note that checkout MUST be last. It changes Spack under our feet.
# If you don't put this last, you'll get import errors for the code

View File

@@ -227,9 +227,7 @@ def unit_test(parser, args, unknown_args):
# has been used, then test that extension.
pytest_root = spack.paths.spack_root
if args.extension:
target = args.extension
extensions = spack.extensions.get_extension_paths()
pytest_root = spack.extensions.path_for_extension(target, *extensions)
pytest_root = spack.extensions.load_extension(args.extension)
# pytest.ini lives in the root of the spack repository.
with llnl.util.filesystem.working_dir(pytest_root):

View File

@@ -20,16 +20,16 @@ def __init__(self, *args, **kwargs):
self.version_argument = "-V"
# Subclasses use possible names of C compiler
cc_names = ["craycc", "cc"]
cc_names = ["craycc"]
# Subclasses use possible names of C++ compiler
cxx_names = ["crayCC", "CC"]
cxx_names = ["crayCC"]
# Subclasses use possible names of Fortran 77 compiler
f77_names = ["crayftn", "ftn"]
f77_names = ["crayftn"]
# Subclasses use possible names of Fortran 90 compiler
fc_names = ["crayftn", "ftn"]
fc_names = ["crayftn"]
# MacPorts builds gcc versions with prefixes and -mp-X.Y suffixes.
suffixes = [r"-mp-\d\.\d"]

View File

@@ -31,7 +31,6 @@
import spack.config
import spack.environment
import spack.error
import spack.paths
import spack.platforms
import spack.repo
import spack.spec
@@ -92,9 +91,7 @@ def concretize_develop(self, spec):
if not dev_info:
return False
path = spack.util.path.canonicalize_path(
dev_info["path"], default_wd=env.path, replacements=spack.paths.path_replacements()
)
path = spack.util.path.canonicalize_path(dev_info["path"], default_wd=env.path)
if "dev_path" in spec.variants:
assert spec.variants["dev_path"].value == path

View File

@@ -1451,9 +1451,7 @@ def fetch_remote_configs(url: str, dest_dir: str, skip_existing: bool = True) ->
def _fetch_file(url):
raw = raw_github_gitlab_url(url)
tty.debug("Reading config from url {0}".format(raw))
return web_util.fetch_url_text(
raw, dest_dir=dest_dir, fetch_method=CONFIG.get("config:url_fetch_method")
)
return web_util.fetch_url_text(raw, dest_dir=dest_dir)
if not url:
raise ConfigFileError("Cannot retrieve configuration without a URL")

View File

@@ -309,10 +309,14 @@ def find_windows_kit_roots() -> List[str]:
return glob.glob(kit_base)
@staticmethod
def find_windows_kit_bin_paths(kit_base: Optional[str] = None) -> List[str]:
def find_windows_kit_bin_paths(
kit_base: Union[Optional[str], Optional[list]] = None
) -> List[str]:
"""Returns Windows kit bin directory per version"""
kit_base = WindowsKitExternalPaths.find_windows_kit_roots() if not kit_base else kit_base
assert kit_base, "Unexpectedly empty value for Windows kit base path"
if isinstance(kit_base, str):
kit_base = kit_base.split(";")
kit_paths = []
for kit in kit_base:
kit_bin = os.path.join(kit, "bin")
@@ -320,10 +324,14 @@ def find_windows_kit_bin_paths(kit_base: Optional[str] = None) -> List[str]:
return kit_paths
@staticmethod
def find_windows_kit_lib_paths(kit_base: Optional[str] = None) -> List[str]:
def find_windows_kit_lib_paths(
kit_base: Union[Optional[str], Optional[list]] = None
) -> List[str]:
"""Returns Windows kit lib directory per version"""
kit_base = WindowsKitExternalPaths.find_windows_kit_roots() if not kit_base else kit_base
assert kit_base, "Unexpectedly empty value for Windows kit base path"
if isinstance(kit_base, str):
kit_base = kit_base.split(";")
kit_paths = []
for kit in kit_base:
kit_lib = os.path.join(kit, "Lib")

View File

@@ -90,8 +90,7 @@
def env_root_path():
"""Override default root path if the user specified it"""
return spack.util.path.canonicalize_path(
spack.config.get("config:environments_root", default=default_env_path),
replacements=spack.paths.path_replacements(),
spack.config.get("config:environments_root", default=default_env_path)
)
@@ -479,9 +478,7 @@ def __init__(
):
self.base = base_path
self.raw_root = root
self.root = spack.util.path.canonicalize_path(
root, default_wd=base_path, replacements=spack.paths.path_replacements()
)
self.root = spack.util.path.canonicalize_path(root, default_wd=base_path)
self.projections = projections
self.select = select
self.exclude = exclude
@@ -496,9 +493,7 @@ def exclude_fn(self, spec):
def update_root(self, new_path):
self.raw_root = new_path
self.root = spack.util.path.canonicalize_path(
new_path, default_wd=self.base, replacements=spack.paths.path_replacements()
)
self.root = spack.util.path.canonicalize_path(new_path, default_wd=self.base)
def __eq__(self, other):
return all(
@@ -990,9 +985,7 @@ def included_config_scopes(self):
missing = []
for i, config_path in enumerate(reversed(includes)):
# allow paths to contain spack config/environment variables, etc.
config_path = substitute_path_variables(
config_path, replacements=spack.paths.path_replacements()
)
config_path = substitute_path_variables(config_path)
include_url = urllib.parse.urlparse(config_path)
@@ -1303,9 +1296,7 @@ def develop(self, spec: Spec, path: str, clone: bool = False) -> bool:
# to be created, then copy it afterwards somewhere else. It would be
# better if we can create the `source_path` directly into its final
# destination.
abspath = spack.util.path.canonicalize_path(
path, default_wd=self.path, replacements=spack.paths.path_replacements()
)
abspath = spack.util.path.canonicalize_path(path, default_wd=self.path)
pkg_cls = spack.repo.PATH.get_pkg_class(spec.name)
# We construct a package class ourselves, rather than asking for
# Spec.package, since Spec only allows this when it is concrete

View File

@@ -6,17 +6,18 @@
for Spack's command extensions.
"""
import difflib
import glob
import importlib
import os
import re
import sys
import types
from typing import List
import llnl.util.lang
import spack.config
import spack.error
import spack.paths
import spack.util.path
_extension_regexp = re.compile(r"spack-(\w[-\w]*)$")
@@ -76,6 +77,15 @@ def load_command_extension(command, path):
if not os.path.exists(cmd_path):
return None
ensure_extension_loaded(extension, path=path)
module = importlib.import_module(module_name)
sys.modules[module_name] = module
return module
def ensure_extension_loaded(extension, *, path):
def ensure_package_creation(name):
package_name = "{0}.{1}".format(__name__, name)
if package_name in sys.modules:
@@ -101,17 +111,28 @@ def ensure_package_creation(name):
ensure_package_creation(extension)
ensure_package_creation(extension + ".cmd")
module = importlib.import_module(module_name)
sys.modules[module_name] = module
return module
def load_extension(name: str) -> str:
"""Loads a single extension into the 'spack.extensions' package.
Args:
name: name of the extension
"""
extension_root = path_for_extension(name, paths=get_extension_paths())
ensure_extension_loaded(name, path=extension_root)
commands = glob.glob(
os.path.join(extension_root, extension_name(extension_root), "cmd", "*.py")
)
commands = [os.path.basename(x).rstrip(".py") for x in commands]
for command in commands:
load_command_extension(command, extension_root)
return extension_root
def get_extension_paths():
"""Return the list of canonicalized extension paths from config:extensions."""
extension_paths = spack.config.get("config:extensions") or []
r = spack.paths.path_replacements()
paths = [spack.util.path.canonicalize_path(p, replacements=r) for p in extension_paths]
paths = [spack.util.path.canonicalize_path(p) for p in extension_paths]
return paths
@@ -127,7 +148,7 @@ def get_command_paths():
return command_paths
def path_for_extension(target_name, *paths):
def path_for_extension(target_name: str, *, paths: List[str]) -> str:
"""Return the test root dir for a given extension.
Args:

View File

@@ -301,12 +301,7 @@ def fetch(self):
url = None
errors = []
for url in self.candidate_urls:
if not web_util.url_exists(
url,
fetch_method=spack.config.get("config:url_fetch_method", "urllib"),
verify_ssl=spack.config.get("config:verify_ssl"),
timeout=spack.config.get("config:connect_timeout", 10),
):
if not web_util.url_exists(url):
tty.debug("URL does not exist: " + url)
continue
@@ -343,12 +338,8 @@ def _fetch_urllib(self, url):
# Run urllib but grab the mime type from the http headers
try:
url, headers, response = web_util.read_from_url(
url,
verify_ssl=spack.config.get("config:verify_ssl", True),
timeout=spack.config.get("config:connect_timeout", 10),
)
except web_util.WebError as e:
url, headers, response = web_util.read_from_url(url)
except web_util.SpackWebError as e:
# clean up archive on failure.
if self.archive_file:
os.remove(self.archive_file)
@@ -394,15 +385,7 @@ def _fetch_curl(self, url):
timeout = self.extra_options.get("timeout")
connect_timeout = spack.config.get("config:connect_timeout", 10)
if timeout:
timeout = max(int(timeout), int(connect_timeout))
else:
timeout = int(connect_timeout)
base_args = web_util.base_curl_fetch_args(
url, timeout=timeout, verify_ssl=spack.config.get("config:verify_ssl")
)
base_args = web_util.base_curl_fetch_args(url, timeout)
curl_args = save_args + base_args + cookie_args
# Run curl but grab the mime type from the http headers
@@ -420,7 +403,7 @@ def _fetch_curl(self, url):
try:
web_util.check_curl_code(curl.returncode)
except web_util.WebError as err:
except spack.error.FetchError as err:
raise spack.fetch_strategy.FailedDownloadError(url, str(err))
self._check_headers(headers)
@@ -480,10 +463,7 @@ def archive(self, destination):
raise NoArchiveFileError("Cannot call archive() before fetching.")
web_util.push_to_url(
self.archive_file,
url_util.path_to_file_url(destination),
keep_original=True,
verify_ssl=spack.config.get("config:verify_ssl", True),
self.archive_file, url_util.path_to_file_url(destination), keep_original=True
)
@_needs_stage
@@ -1350,11 +1330,7 @@ def fetch(self):
basename = os.path.basename(parsed_url.path)
with working_dir(self.stage.path):
_, headers, stream = web_util.read_from_url(
self.url,
verify_ssl=spack.config.get("config:verify_ssl", True),
timeout=spack.config.get("config:connect_timeout", 10),
)
_, headers, stream = web_util.read_from_url(self.url)
with open(basename, "wb") as f:
shutil.copyfileobj(stream, f)
@@ -1401,11 +1377,7 @@ def fetch(self):
basename = os.path.basename(parsed_url.path)
with working_dir(self.stage.path):
_, headers, stream = web_util.read_from_url(
self.url,
verify_ssl=spack.config.get("config:verify_ssl", True),
timeout=spack.config.get("config:connect_timeout", 10),
)
_, headers, stream = web_util.read_from_url(self.url)
with open(basename, "wb") as f:
shutil.copyfileobj(stream, f)

View File

@@ -9,7 +9,6 @@
from llnl.util.filesystem import mkdirp
from llnl.util.symlink import symlink
import spack.config
import spack.util.editor as ed
@@ -40,7 +39,7 @@ def set_up_license(pkg):
write_license_file(pkg, license_path)
# use spack.util.executable so the editor does not hang on return here
ed.editor(license_path, exec_fn=ed.executable, debug=spack.config.get("config:debug"))
ed.editor(license_path, exec_fn=ed.executable)
else:
# Use already existing license file
tty.msg("Found already existing license %s" % license_path)

View File

@@ -5,18 +5,18 @@
import os
import spack.package_prefs as pp
import spack.util.file_permissions as fp
def post_install(spec, explicit=None):
if not spec.external:
pp.set_permissions_by_spec(spec.prefix, spec)
fp.set_permissions_by_spec(spec.prefix, spec)
# os.walk explicitly set not to follow links
for root, dirs, files in os.walk(spec.prefix, followlinks=False):
for d in dirs:
if not os.path.islink(os.path.join(root, d)):
pp.set_permissions_by_spec(os.path.join(root, d), spec)
fp.set_permissions_by_spec(os.path.join(root, d), spec)
for f in files:
if not os.path.islink(os.path.join(root, f)):
pp.set_permissions_by_spec(os.path.join(root, f), spec)
fp.set_permissions_by_spec(os.path.join(root, f), spec)

View File

@@ -91,8 +91,7 @@ def get_test_stage_dir():
the default test stage path
"""
return spack.util.path.canonicalize_path(
spack.config.get("config:test_stage", spack.paths.default_test_path),
replacements=spack.paths.path_replacements(),
spack.config.get("config:test_stage", spack.paths.default_test_path)
)

View File

@@ -357,7 +357,8 @@ def _print_installed_pkg(message: str) -> None:
Args:
message (str): message to be output
"""
print(colorize("@*g{[+]} ") + spack.util.path.debug_padded_filter(message))
if tty.msg_enabled():
print(colorize("@*g{[+]} ") + spack.util.path.debug_padded_filter(message))
def print_install_test_log(pkg: "spack.package_base.PackageBase") -> None:
@@ -491,8 +492,7 @@ def _process_binary_cache_tarball(
tty.msg(f"Extracting {package_id(pkg)} from binary cache")
padding = spack.config.get("config:install_tree:padded_length", None)
with timer.measure("install"), spack.util.path.filter_padding(padding=padding):
with timer.measure("install"), spack.util.path.filter_padding():
binary_distribution.extract_tarball(
pkg.spec, download_result, unsigned=unsigned, force=False, timer=timer
)
@@ -2008,7 +2008,9 @@ def install(self) -> None:
# Only enable the terminal status line when we're in a tty without debug info
# enabled, so that the output does not get cluttered.
term_status = TermStatusLine(enabled=sys.stdout.isatty() and not tty.is_debug())
term_status = TermStatusLine(
enabled=sys.stdout.isatty() and tty.msg_enabled() and not tty.is_debug()
)
while self.build_pq:
task = self._pop_task()
@@ -2493,8 +2495,7 @@ def build_process(pkg: "spack.package_base.PackageBase", install_args: dict) ->
installer = BuildProcessInstaller(pkg, install_args)
# don't print long padded paths in executable debug output.
padding = spack.config.get("config:install_tree:padded_length", None)
with spack.util.path.filter_padding(padding=padding):
with spack.util.path.filter_padding():
return installer.run()

View File

@@ -30,7 +30,6 @@
import spack.fetch_strategy
import spack.mirror
import spack.oci.image
import spack.paths
import spack.spec
import spack.util.path
import spack.util.spack_json as sjson
@@ -52,11 +51,7 @@ def _url_or_path_to_url(url_or_path: str) -> str:
return url_or_path
# Otherwise we interpret it as path, and we should promote it to file:// URL.
return url_util.path_to_file_url(
spack.util.path.canonicalize_path(
url_or_path, replacements=spack.paths.path_replacements()
)
)
return url_util.path_to_file_url(spack.util.path.canonicalize_path(url_or_path))
class Mirror:

View File

@@ -46,7 +46,6 @@
import spack.environment
import spack.error
import spack.modules.common
import spack.package_prefs as pp
import spack.paths
import spack.projections as proj
import spack.repo
@@ -55,6 +54,7 @@
import spack.store
import spack.tengine as tengine
import spack.util.environment
import spack.util.file_permissions as fp
import spack.util.path
import spack.util.spack_yaml as syaml
from spack.context import Context
@@ -225,7 +225,7 @@ def root_path(name, module_set_name):
roots = spack.config.merge_yaml(defaults, roots)
path = roots.get(name, os.path.join(spack.paths.share_path, name))
return spack.util.path.canonicalize_path(path, replacements=spack.paths.path_replacements())
return spack.util.path.canonicalize_path(path)
def generate_module_index(root, modules, overwrite=False):
@@ -968,7 +968,7 @@ def write(self, overwrite=False):
# Set the file permissions of the module to match that of the package
if os.path.exists(self.layout.filename):
pp.set_permissions_by_spec(self.layout.filename, self.spec)
fp.set_permissions_by_spec(self.layout.filename, self.spec)
# Symlink defaults if needed
self.update_module_defaults()

View File

@@ -5,11 +5,20 @@
from ._operating_system import OperatingSystem
from .cray_backend import CrayBackend
from .cray_frontend import CrayFrontend
from .freebsd import FreeBSDOs
from .linux_distro import LinuxDistro
from .mac_os import MacOs
from .windows_os import WindowsOs
__all__ = ["OperatingSystem", "LinuxDistro", "MacOs", "CrayFrontend", "CrayBackend", "WindowsOs"]
__all__ = [
"OperatingSystem",
"LinuxDistro",
"MacOs",
"CrayFrontend",
"CrayBackend",
"WindowsOs",
"FreeBSDOs",
]
#: List of all the Operating Systems known to Spack
operating_systems = [LinuxDistro, MacOs, CrayFrontend, CrayBackend, WindowsOs]
operating_systems = [LinuxDistro, MacOs, CrayFrontend, CrayBackend, WindowsOs, FreeBSDOs]

View File

@@ -0,0 +1,15 @@
# Copyright 2013-2023 Lawrence Livermore National Security, LLC and other
# Spack Project Developers. See the top-level COPYRIGHT file for details.
#
# SPDX-License-Identifier: (Apache-2.0 OR MIT)
import platform as py_platform
from spack.version import Version
from ._operating_system import OperatingSystem
class FreeBSDOs(OperatingSystem):
def __init__(self):
release = py_platform.release().split("-", 1)[0]
super().__init__("freebsd", Version(release))

View File

@@ -4,7 +4,7 @@
# SPDX-License-Identifier: (Apache-2.0 OR MIT)
# flake8: noqa: F401
"""spack.package is a set of useful build tools and directives for packages.
"""spack.util.package is a set of useful build tools and directives for packages.
Everything in this module is automatically imported into Spack package files.
"""
@@ -101,6 +101,7 @@
on_package_attributes,
)
from spack.spec import InvalidSpecDetected, Spec
from spack.util.cpus import determine_number_of_jobs
from spack.util.executable import *
from spack.variant import (
any_combination_of,

View File

@@ -63,9 +63,9 @@
install_test_root,
)
from spack.installer import InstallError, PackageInstaller
from spack.package_hash import package_hash
from spack.stage import DIYStage, ResourceStage, Stage, StageComposite, compute_stage_name
from spack.util.executable import ProcessError, which
from spack.util.package_hash import package_hash
from spack.version import GitVersion, StandardVersion, Version
FLAG_HANDLER_RETURN_TYPE = Tuple[
@@ -829,9 +829,7 @@ def name(cls):
@classproperty
def global_license_dir(cls):
"""Returns the directory where license files for all packages are stored."""
return spack.util.path.canonicalize_path(
spack.config.get("config:license_dir"), replacements=spack.paths.path_replacements()
)
return spack.util.path.canonicalize_path(spack.config.get("config:license_dir"))
@property
def global_license_file(self):
@@ -987,12 +985,7 @@ def find_valid_url_for_version(self, version):
urls = self.all_urls_for_version(version)
for u in urls:
if spack.util.web.url_exists(
u,
fetch_method=spack.config.get("config:url_fetch_method", "urllib"),
verify_ssl=spack.config.get("config:verify_ssl"),
timeout=spack.config.get("config:connect_timeout", 10),
):
if spack.util.web.url_exists(u):
return u
return None

View File

@@ -2,14 +2,11 @@
# Spack Project Developers. See the top-level COPYRIGHT file for details.
#
# SPDX-License-Identifier: (Apache-2.0 OR MIT)
import os
import stat
import warnings
import spack.error
import spack.paths
import spack.repo
import spack.util.file_permissions as fp
from spack.config import ConfigError
from spack.util.path import canonicalize_path
from spack.version import Version
@@ -180,9 +177,7 @@ def _package(maybe_abstract_spec):
spec_str = entry["spec"]
external_path = entry.get("prefix", None)
if external_path:
external_path = canonicalize_path(
external_path, replacements=spack.paths.path_replacements()
)
external_path = canonicalize_path(external_path)
external_modules = entry.get("modules", None)
external_spec = spack.spec.Spec.from_detection(
spack.spec.Spec(
@@ -299,16 +294,5 @@ def get_package_group(spec):
return group
def set_permissions_by_spec(path, spec):
# Get permissions for spec
if os.path.isdir(path):
perms = get_package_dir_permissions(spec)
else:
perms = get_package_permissions(spec)
group = get_package_group(spec)
fp.set_permissions(path, perms, group)
class VirtualInPackagesYAMLError(spack.error.SpackError):
"""Raised when a disallowed virtual is found in packages.yaml"""

View File

@@ -9,16 +9,11 @@
throughout Spack and should bring in a minimal number of external
dependencies.
"""
import getpass
import os
import tempfile
from datetime import date
from pathlib import PurePath
import llnl.util.filesystem
from spack.util.path import NOMATCH
#: This file lives in $prefix/lib/spack/spack/__file__
prefix = str(PurePath(llnl.util.filesystem.ancestor(__file__, 4)))
@@ -141,50 +136,3 @@ def _get_system_config_path():
#: System configuration location
system_config_path = _get_system_config_path()
def architecture():
# break circular import
import spack.platforms
import spack.spec
host_platform = spack.platforms.host()
host_os = host_platform.operating_system("default_os")
host_target = host_platform.target("default_target")
return spack.spec.ArchSpec((str(host_platform), str(host_os), str(host_target)))
def get_user():
# User pwd where available because it accounts for effective uids when using ksu and similar
try:
# user pwd for unix systems
import pwd
return pwd.getpwuid(os.geteuid()).pw_name
except ImportError:
# fallback on getpass
return getpass.getuser()
def path_replacements():
# break circular imports
import spack.environment as ev
arch = architecture()
return {
"spack": lambda: prefix,
"user": lambda: get_user(),
"tempdir": lambda: tempfile.gettempdir(),
"user_cache_path": lambda: user_cache_path,
"architecture": lambda: arch,
"arch": lambda: arch,
"platform": lambda: arch.platform,
"operating_system": lambda: arch.os,
"os": lambda: arch.os,
"target": lambda: arch.target,
"target_family": lambda: arch.target.microarchitecture.family,
"date": lambda: date.today().strftime("%Y-%m-%d"),
"env": lambda: ev.active_environment().path if ev.active_environment() else NOMATCH,
}

View File

@@ -8,6 +8,7 @@
from ._platform import Platform
from .cray import Cray
from .darwin import Darwin
from .freebsd import FreeBSD
from .linux import Linux
from .test import Test
from .windows import Windows
@@ -17,6 +18,7 @@
"Cray",
"Darwin",
"Linux",
"FreeBSD",
"Test",
"Windows",
"platforms",

View File

@@ -10,12 +10,13 @@
from .cray import Cray
from .darwin import Darwin
from .freebsd import FreeBSD
from .linux import Linux
from .test import Test
from .windows import Windows
#: List of all the platform classes known to Spack
platforms = [Cray, Darwin, Linux, Windows, Test]
platforms = [Cray, Darwin, Linux, Windows, FreeBSD, Test]
@llnl.util.lang.memoized

View File

@@ -0,0 +1,37 @@
# Copyright 2013-2023 Lawrence Livermore National Security, LLC and other
# Spack Project Developers. See the top-level COPYRIGHT file for details.
#
# SPDX-License-Identifier: (Apache-2.0 OR MIT)
import platform
import archspec.cpu
import spack.target
from spack.operating_systems.freebsd import FreeBSDOs
from ._platform import Platform
class FreeBSD(Platform):
priority = 102
def __init__(self):
super().__init__("freebsd")
for name in archspec.cpu.TARGETS:
self.add_target(name, spack.target.Target(name))
# Get specific default
self.default = archspec.cpu.host().name
self.front_end = self.default
self.back_end = self.default
os = FreeBSDOs()
self.default_os = str(os)
self.front_os = self.default_os
self.back_os = self.default_os
self.add_operating_system(str(os), os)
@classmethod
def detect(cls):
return platform.system().lower() == "freebsd"

View File

@@ -37,7 +37,6 @@
import spack.config
import spack.error
import spack.patch
import spack.paths
import spack.provider_index
import spack.spec
import spack.tag
@@ -929,9 +928,7 @@ def __init__(self, root, cache=None):
"""
# Root directory, containing _repo.yaml and package dirs
# Allow roots to by spack-relative by starting with '$spack'
self.root = spack.util.path.canonicalize_path(
root, replacements=spack.paths.path_replacements()
)
self.root = spack.util.path.canonicalize_path(root)
# check and raise BadRepoError on fail.
def check(condition, msg):
@@ -1330,7 +1327,7 @@ def create_repo(root, namespace=None, subdir=packages_dir_name):
If the namespace is not provided, use basename of root.
Return the canonicalized path and namespace of the created repository.
"""
root = spack.util.path.canonicalize_path(root, replacements=spack.paths.path_replacements())
root = spack.util.path.canonicalize_path(root)
if not namespace:
namespace = os.path.basename(root)

View File

@@ -92,11 +92,12 @@ def __init__(self, configuration: CDashConfiguration):
self.osname = platform.system()
self.osrelease = platform.release()
self.target = spack.platforms.host().target("default_target")
self.endtime = int(time.time())
self.starttime = int(time.time())
self.endtime = self.starttime
self.buildstamp = (
configuration.buildstamp
if configuration.buildstamp
else build_stamp(configuration.track, self.endtime)
else build_stamp(configuration.track, self.starttime)
)
self.buildIds: Dict[str, str] = {}
self.revision = ""
@@ -125,7 +126,7 @@ def build_report_for_package(self, report_dir, package, duration):
report_data[phase] = {}
report_data[phase]["loglines"] = []
report_data[phase]["status"] = 0
report_data[phase]["endtime"] = self.endtime
report_data[phase]["starttime"] = self.starttime
# Track the phases we perform so we know what reports to create.
# We always report the update step because this is how we tell CDash
@@ -153,6 +154,25 @@ def build_report_for_package(self, report_dir, package, duration):
elif cdash_phase:
report_data[cdash_phase]["loglines"].append(xml.sax.saxutils.escape(line))
# something went wrong pre-cdash "configure" phase b/c we have an exception and only
# "update" was encounterd.
# dump the report in the configure line so teams can see what the issue is
if len(phases_encountered) == 1 and package["exception"]:
# TODO this mapping is not ideal since these are pre-configure errors
# we need to determine if a more appropriate cdash phase can be utilized
# for now we will add a message to the log explaining this
cdash_phase = "configure"
phases_encountered.append(cdash_phase)
log_message = (
"Pre-configure errors occured in Spack's process that terminated the "
"build process prematurely.\nSpack output::\n{0}".format(
xml.sax.saxutils.escape(package["exception"])
)
)
report_data[cdash_phase]["loglines"].append(log_message)
# Move the build phase to the front of the list if it occurred.
# This supports older versions of CDash that expect this phase
# to be reported before all others.
@@ -160,9 +180,9 @@ def build_report_for_package(self, report_dir, package, duration):
build_pos = phases_encountered.index("build")
phases_encountered.insert(0, phases_encountered.pop(build_pos))
self.starttime = self.endtime - duration
self.endtime = self.starttime + duration
for phase in phases_encountered:
report_data[phase]["starttime"] = self.starttime
report_data[phase]["endtime"] = self.endtime
report_data[phase]["log"] = "\n".join(report_data[phase]["loglines"])
errors, warnings = parse_log_events(report_data[phase]["loglines"])
@@ -309,7 +329,7 @@ def test_report_for_package(self, report_dir, package, duration):
self.buildname = "{0}-{1}".format(self.current_package_name, package["id"])
else:
self.buildname = self.report_build_name(self.current_package_name)
self.starttime = self.endtime - duration
self.endtime = self.starttime + duration
report_data = self.initialize_report(report_dir)
report_data["hostname"] = socket.gethostname()
@@ -354,7 +374,7 @@ def concretization_report(self, report_dir, msg):
self.buildname = self.base_buildname
report_data = self.initialize_report(report_dir)
report_data["update"] = {}
report_data["update"]["starttime"] = self.endtime
report_data["update"]["starttime"] = self.starttime
report_data["update"]["endtime"] = self.endtime
report_data["update"]["revision"] = self.revision
report_data["update"]["log"] = msg

View File

@@ -41,7 +41,6 @@
import spack.error
import spack.package_base
import spack.package_prefs
import spack.paths
import spack.platforms
import spack.repo
import spack.spec
@@ -2603,11 +2602,7 @@ def setup(
dev_specs = tuple(
spack.spec.Spec(info["spec"]).constrained(
"dev_path=%s"
% spack.util.path.canonicalize_path(
info["path"],
default_wd=env.path,
replacements=spack.paths.path_replacements(),
)
% spack.util.path.canonicalize_path(info["path"], default_wd=env.path)
)
for name, info in env.dev_specs.items()
)
@@ -3124,9 +3119,7 @@ def _develop_specs_from_env(spec, env):
if not dev_info:
return
path = spack.util.path.canonicalize_path(
dev_info["path"], default_wd=env.path, replacements=spack.paths.path_replacements()
)
path = spack.util.path.canonicalize_path(dev_info["path"], default_wd=env.path)
if "dev_path" in spec.variants:
error_msg = (

View File

@@ -150,7 +150,7 @@ def _resolve_paths(candidates):
Adjustments involve removing extra $user from $tempdir if $tempdir includes
$user and appending $user if it is not present in the path.
"""
temp_path = sup.canonicalize_path("$tempdir", replacements=spack.paths.path_replacements())
temp_path = sup.canonicalize_path("$tempdir")
user = getpass.getuser()
tmp_has_usr = user in temp_path.split(os.path.sep)
@@ -162,7 +162,7 @@ def _resolve_paths(candidates):
path = path.replace("/$user", "", 1)
# Ensure the path is unique per user.
can_path = sup.canonicalize_path(path, replacements=spack.paths.path_replacements())
can_path = sup.canonicalize_path(path)
# When multiple users share a stage root, we can avoid conflicts between
# them by adding a per-user subdirectory.
# Avoid doing this on Windows to keep stage absolute path as short as possible.
@@ -199,10 +199,9 @@ def get_stage_root():
def _mirror_roots():
mirrors = spack.config.get("mirrors")
return [
sup.substitute_path_variables(root, replacements=spack.paths.path_replacements())
sup.substitute_path_variables(root)
if root.endswith(os.sep)
else sup.substitute_path_variables(root, replacemnts=spack.paths.path_replacements())
+ os.sep
else sup.substitute_path_variables(root) + os.sep
for root in mirrors.values()
]

View File

@@ -77,9 +77,7 @@ def parse_install_tree(config_dict):
if isinstance(install_tree, str):
tty.warn("Using deprecated format for configuring install_tree")
unpadded_root = install_tree
unpadded_root = spack.util.path.canonicalize_path(
unpadded_root, replacements=spack.paths.path_replacements()
)
unpadded_root = spack.util.path.canonicalize_path(unpadded_root)
# construct projection from previous values for backwards compatibility
all_projection = config_dict.get(
"install_path_scheme", spack.directory_layout.default_projections["all"]
@@ -88,9 +86,7 @@ def parse_install_tree(config_dict):
projections = {"all": all_projection}
else:
unpadded_root = install_tree.get("root", DEFAULT_INSTALL_TREE_ROOT)
unpadded_root = spack.util.path.canonicalize_path(
unpadded_root, replacements=spack.paths.path_replacements()
)
unpadded_root = spack.util.path.canonicalize_path(unpadded_root)
padded_length = install_tree.get("padded_length", False)
if padded_length is True:
@@ -271,9 +267,7 @@ def _construct_upstream_dbs_from_install_roots(
for install_root in reversed(install_roots):
upstream_dbs = list(accumulated_upstream_dbs)
next_db = spack.database.Database(
spack.util.path.canonicalize_path(
install_root, replacements=spack.paths.path_replacements()
),
spack.util.path.canonicalize_path(install_root),
is_upstream=True,
upstream_dbs=upstream_dbs,
)

View File

@@ -10,7 +10,6 @@
import spack.config
import spack.extensions
import spack.paths
from spack.util.path import canonicalize_path
@@ -77,10 +76,7 @@ def make_environment(dirs: Optional[Tuple[str, ...]] = None):
# Default directories where to search for templates
builtins = spack.config.get("config:template_dirs", ["$spack/share/spack/templates"])
extensions = spack.extensions.get_template_dirs()
r = spack.paths.path_replacements()
dirs = tuple(
canonicalize_path(d, replacements=r) for d in itertools.chain(builtins, extensions)
)
dirs = tuple(canonicalize_path(d) for d in itertools.chain(builtins, extensions))
# Loader for the templates
loader = jinja2.FileSystemLoader(dirs)

View File

@@ -30,6 +30,8 @@ def current_host_platform():
current_platform = spack.platforms.Darwin()
elif "Windows" in platform.system():
current_platform = spack.platforms.Windows()
elif "FreeBSD" in platform.system():
current_platform = spack.platforms.FreeBSD()
return current_platform

View File

@@ -25,12 +25,12 @@
import spack.caches
import spack.config
import spack.fetch_strategy
import spack.gpg
import spack.hooks.sbang as sbang
import spack.main
import spack.mirror
import spack.repo
import spack.store
import spack.util.gpg
import spack.util.spack_yaml as syaml
import spack.util.url as url_util
import spack.util.web as web_util
@@ -344,10 +344,10 @@ def test_push_and_fetch_keys(mock_gnupghome):
# dir 1: create a new key, record its fingerprint, and push it to a new
# mirror
with spack.gpg.gnupghome_override(gpg_dir1):
spack.gpg.create(name="test-key", email="fake@test.key", expires="0", comment=None)
with spack.util.gpg.gnupghome_override(gpg_dir1):
spack.util.gpg.create(name="test-key", email="fake@test.key", expires="0", comment=None)
keys = spack.gpg.public_keys()
keys = spack.util.gpg.public_keys()
assert len(keys) == 1
fpr = keys[0]
@@ -355,12 +355,12 @@ def test_push_and_fetch_keys(mock_gnupghome):
# dir 2: import the key from the mirror, and confirm that its fingerprint
# matches the one created above
with spack.gpg.gnupghome_override(gpg_dir2):
assert len(spack.gpg.public_keys()) == 0
with spack.util.gpg.gnupghome_override(gpg_dir2):
assert len(spack.util.gpg.public_keys()) == 0
bindist.get_keys(mirrors=mirrors, install=True, trust=True, force=True)
new_keys = spack.gpg.public_keys()
new_keys = spack.util.gpg.public_keys()
assert len(new_keys) == 1
assert new_keys[0] == fpr
@@ -672,7 +672,7 @@ def test_etag_fetching_304():
# Test conditional fetch with etags. If the remote hasn't modified the file
# it returns 304, which is an HTTPError in urllib-land. That should be
# handled as success, since it means the local cache is up-to-date.
def response_304(request: urllib.request.Request, verify_ssl=True, timeout=10):
def response_304(request: urllib.request.Request):
url = request.get_full_url()
if url == "https://www.example.com/build_cache/index.json":
assert request.get_header("If-none-match") == '"112a8bbc1b3f7f185621c1ee335f0502"'
@@ -694,7 +694,7 @@ def response_304(request: urllib.request.Request, verify_ssl=True, timeout=10):
def test_etag_fetching_200():
# Test conditional fetch with etags. The remote has modified the file.
def response_200(request: urllib.request.Request, verify_ssl=True, timeout=10):
def response_200(request: urllib.request.Request):
url = request.get_full_url()
if url == "https://www.example.com/build_cache/index.json":
assert request.get_header("If-none-match") == '"112a8bbc1b3f7f185621c1ee335f0502"'
@@ -722,7 +722,7 @@ def response_200(request: urllib.request.Request, verify_ssl=True, timeout=10):
def test_etag_fetching_404():
# Test conditional fetch with etags. The remote has modified the file.
def response_404(request: urllib.request.Request, verify_ssl=True, timeout=10):
def response_404(request: urllib.request.Request):
raise urllib.error.HTTPError(
request.get_full_url(),
404,
@@ -745,7 +745,7 @@ def test_default_index_fetch_200():
index_json = '{"Hello": "World"}'
index_json_hash = bindist.compute_hash(index_json)
def urlopen(request: urllib.request.Request, **kwargs):
def urlopen(request: urllib.request.Request):
url = request.get_full_url()
if url.endswith("index.json.hash"):
return urllib.response.addinfourl( # type: ignore[arg-type]
@@ -784,7 +784,7 @@ def test_default_index_dont_fetch_index_json_hash_if_no_local_hash():
index_json = '{"Hello": "World"}'
index_json_hash = bindist.compute_hash(index_json)
def urlopen(request: urllib.request.Request, **kwargs):
def urlopen(request: urllib.request.Request):
url = request.get_full_url()
if url.endswith("index.json"):
return urllib.response.addinfourl(
@@ -813,7 +813,7 @@ def test_default_index_not_modified():
index_json = '{"Hello": "World"}'
index_json_hash = bindist.compute_hash(index_json)
def urlopen(request: urllib.request.Request, **kwargs):
def urlopen(request: urllib.request.Request):
url = request.get_full_url()
if url.endswith("index.json.hash"):
return urllib.response.addinfourl(
@@ -838,7 +838,7 @@ def test_default_index_invalid_hash_file(index_json):
# Test invalid unicode / invalid hash type
index_json_hash = bindist.compute_hash(index_json)
def urlopen(request: urllib.request.Request, **kwargs):
def urlopen(request: urllib.request.Request):
return urllib.response.addinfourl(
io.BytesIO(),
headers={}, # type: ignore[arg-type]
@@ -858,7 +858,7 @@ def test_default_index_json_404():
index_json = '{"Hello": "World"}'
index_json_hash = bindist.compute_hash(index_json)
def urlopen(request: urllib.request.Request, **kwargs):
def urlopen(request: urllib.request.Request):
url = request.get_full_url()
if url.endswith("index.json.hash"):
return urllib.response.addinfourl(

View File

@@ -10,7 +10,6 @@
import spack.bootstrap.core
import spack.compilers
import spack.environment
import spack.paths
import spack.store
import spack.util.path
@@ -82,9 +81,7 @@ def test_store_path_customization(config_value, expected, mutable_config):
# Check the store path
current = spack.bootstrap.config.store_path()
assert current == spack.util.path.canonicalize_path(
expected, replacements=spack.paths.path_replacements()
)
assert current == spack.util.path.canonicalize_path(expected)
def test_raising_exception_if_bootstrap_disabled(mutable_config):

View File

@@ -16,9 +16,9 @@
import spack.config
import spack.environment as ev
import spack.error
import spack.gpg
import spack.paths as spack_paths
import spack.util.git
import spack.util.gpg
import spack.util.spack_yaml as syaml

View File

@@ -18,11 +18,11 @@
import spack.ci as ci
import spack.config
import spack.environment as ev
import spack.gpg
import spack.hash_types as ht
import spack.main
import spack.paths as spack_paths
import spack.repo as repo
import spack.util.gpg
import spack.util.spack_yaml as syaml
import spack.util.url as url_util
from spack.schema.buildcache_spec import schema as specfile_schema
@@ -1210,7 +1210,7 @@ def test_push_mirror_contents(
dl_dir = working_dir.join("download_dir")
if not os.path.exists(dl_dir.strpath):
os.makedirs(dl_dir.strpath)
buildcache_cmd("download", "--spec-file", json_path, "--path", dl_dir.strpath)
buildcache_cmd("download", "--spec", json_path, "--path", dl_dir.strpath)
dl_dir_list = os.listdir(dl_dir.strpath)
assert len(dl_dir_list) == 2

View File

@@ -10,7 +10,6 @@
import llnl.util.filesystem as fs
import spack.environment as ev
import spack.paths
import spack.spec
from spack.main import SpackCommand
@@ -107,9 +106,7 @@ def test_develop_canonicalize_path(self, monkeypatch, config):
env("create", "test")
with ev.read("test") as e:
path = "../$user"
abspath = spack.util.path.canonicalize_path(
path, e.path, replacements=spack.paths.path_replacements()
)
abspath = spack.util.path.canonicalize_path(path, e.path)
def check_path(stage, dest):
assert dest == abspath
@@ -126,9 +123,7 @@ def test_develop_canonicalize_path_no_args(self, monkeypatch, config):
env("create", "test")
with ev.read("test") as e:
path = "$user"
abspath = spack.util.path.canonicalize_path(
path, e.path, replacements=spack.paths.path_replacements()
)
abspath = spack.util.path.canonicalize_path(path, e.path)
def check_path(stage, dest):
assert dest == abspath

View File

@@ -904,9 +904,7 @@ def test_env_with_included_config_var_path(tmpdir, packages_file):
spack_yaml = env_path / ev.manifest_name
spack_yaml.write_text(mpileaks_env_config(config_var_path))
config_real_path = substitute_path_variables(
config_var_path, replacements=spack.paths.path_replacements()
)
config_real_path = substitute_path_variables(config_var_path)
shutil.move(included_file, config_real_path)
assert os.path.exists(config_real_path)

View File

@@ -10,9 +10,8 @@
import llnl.util.filesystem as fs
import spack.bootstrap
import spack.gpg
import spack.paths
import spack.util.executable
import spack.util.gpg
from spack.main import SpackCommand
from spack.paths import mock_gpg_data_path, mock_gpg_keys_path
from spack.util.executable import ProcessError
@@ -46,19 +45,19 @@ def test_find_gpg(cmd_name, version, tmpdir, mock_gnupghome, monkeypatch):
monkeypatch.setenv("PATH", str(tmpdir))
if version == "undetectable" or version.endswith("1.3.4"):
with pytest.raises(spack.gpg.SpackGPGError):
spack.gpg.init(force=True, gpg_path=spack.paths.gpg_path)
with pytest.raises(spack.util.gpg.SpackGPGError):
spack.util.gpg.init(force=True)
else:
spack.gpg.init(force=True, gpg_path=spack.paths.gpg_path)
assert spack.gpg.GPG is not None
assert spack.gpg.GPGCONF is not None
spack.util.gpg.init(force=True)
assert spack.util.gpg.GPG is not None
assert spack.util.gpg.GPGCONF is not None
def test_no_gpg_in_path(tmpdir, mock_gnupghome, monkeypatch, mutable_config):
monkeypatch.setenv("PATH", str(tmpdir))
bootstrap("disable")
with pytest.raises(RuntimeError):
spack.gpg.init(force=True, gpg_path=spack.paths.gpg_path)
spack.util.gpg.init(force=True)
@pytest.mark.maybeslow
@@ -106,7 +105,7 @@ def test_gpg(tmpdir, mutable_config, mock_gnupghome):
"Spack testing 1",
"spack@googlegroups.com",
)
keyfp = spack.gpg.signing_keys()[0]
keyfp = spack.util.gpg.signing_keys()[0]
# List the keys.
# TODO: Test the output here.

View File

@@ -338,51 +338,50 @@ def __init__(self, path):
def test_substitute_config_variables(mock_low_high_config, monkeypatch):
prefix = spack.paths.prefix.lstrip("/")
r = spack.paths.path_replacements()
assert cross_plat_join(
os.sep + os.path.join("foo", "bar", "baz"), prefix
) == spack_path.canonicalize_path("/foo/bar/baz/$spack", replacements=r)
) == spack_path.canonicalize_path("/foo/bar/baz/$spack")
assert cross_plat_join(
spack.paths.prefix, os.path.join("foo", "bar", "baz")
) == spack_path.canonicalize_path("$spack/foo/bar/baz/", replacements=r)
) == spack_path.canonicalize_path("$spack/foo/bar/baz/")
assert cross_plat_join(
os.sep + os.path.join("foo", "bar", "baz"), prefix, os.path.join("foo", "bar", "baz")
) == spack_path.canonicalize_path("/foo/bar/baz/$spack/foo/bar/baz/", replacements=r)
) == spack_path.canonicalize_path("/foo/bar/baz/$spack/foo/bar/baz/")
assert cross_plat_join(
os.sep + os.path.join("foo", "bar", "baz"), prefix
) == spack_path.canonicalize_path("/foo/bar/baz/${spack}", replacements=r)
) == spack_path.canonicalize_path("/foo/bar/baz/${spack}")
assert cross_plat_join(
spack.paths.prefix, os.path.join("foo", "bar", "baz")
) == spack_path.canonicalize_path("${spack}/foo/bar/baz/", replacements=r)
) == spack_path.canonicalize_path("${spack}/foo/bar/baz/")
assert cross_plat_join(
os.sep + os.path.join("foo", "bar", "baz"), prefix, os.path.join("foo", "bar", "baz")
) == spack_path.canonicalize_path("/foo/bar/baz/${spack}/foo/bar/baz/", replacements=r)
) == spack_path.canonicalize_path("/foo/bar/baz/${spack}/foo/bar/baz/")
assert cross_plat_join(
os.sep + os.path.join("foo", "bar", "baz"), prefix, os.path.join("foo", "bar", "baz")
) != spack_path.canonicalize_path("/foo/bar/baz/${spack/foo/bar/baz/", replacements=r)
) != spack_path.canonicalize_path("/foo/bar/baz/${spack/foo/bar/baz/")
# $env replacement is a no-op when no environment is active
assert spack_path.canonicalize_path(
os.sep + os.path.join("foo", "bar", "baz", "$env"), replacements=r
os.sep + os.path.join("foo", "bar", "baz", "$env")
) == os.sep + os.path.join("foo", "bar", "baz", "$env")
# Fake an active environment and $env is replaced properly
fake_env_path = os.sep + os.path.join("quux", "quuux")
monkeypatch.setattr(ev, "active_environment", lambda: MockEnv(fake_env_path))
assert spack_path.canonicalize_path("$env/foo/bar/baz", replacements=r) == os.path.join(
assert spack_path.canonicalize_path("$env/foo/bar/baz") == os.path.join(
fake_env_path, os.path.join("foo", "bar", "baz")
)
# relative paths without source information are relative to cwd
assert spack_path.canonicalize_path(
os.path.join("foo", "bar", "baz"), replacements=r
) == os.path.abspath(os.path.join("foo", "bar", "baz"))
assert spack_path.canonicalize_path(os.path.join("foo", "bar", "baz")) == os.path.abspath(
os.path.join("foo", "bar", "baz")
)
# relative paths with source information are relative to the file
spack.config.set(
@@ -390,19 +389,19 @@ def test_substitute_config_variables(mock_low_high_config, monkeypatch):
)
spack.config.CONFIG.clear_caches()
path = spack.config.get("modules:default:roots:lmod")
assert spack_path.canonicalize_path(path, replacements=r) == os.path.normpath(
assert spack_path.canonicalize_path(path) == os.path.normpath(
os.path.join(mock_low_high_config.scopes["low"].path, os.path.join("foo", "bar", "baz"))
)
# test architecture information is in replacements
assert spack_path.canonicalize_path(
os.path.join("foo", "$platform", "bar"), replacements=r
os.path.join("foo", "$platform", "bar")
) == os.path.abspath(os.path.join("foo", "test", "bar"))
host_target = spack.platforms.host().target("default_target")
host_target_family = str(host_target.microarchitecture.family)
assert spack_path.canonicalize_path(
os.path.join("foo", "$target_family", "bar"), replacements=r
os.path.join("foo", "$target_family", "bar")
) == os.path.abspath(os.path.join("foo", host_target_family, "bar"))
@@ -439,33 +438,28 @@ def test_substitute_user(mock_low_high_config):
assert os.sep + os.path.join(
"foo", "bar"
) + os.sep + user + os.sep + "baz" == spack_path.canonicalize_path(
os.sep + os.path.join("foo", "bar", "$user", "baz"),
replacements=spack.paths.path_replacements(),
os.sep + os.path.join("foo", "bar", "$user", "baz")
)
def test_substitute_user_cache(mock_low_high_config):
user_cache_path = spack.paths.user_cache_path
assert user_cache_path + os.sep + "baz" == spack_path.canonicalize_path(
os.path.join("$user_cache_path", "baz"), replacements=spack.paths.path_replacements()
os.path.join("$user_cache_path", "baz")
)
def test_substitute_tempdir(mock_low_high_config):
tempdir = tempfile.gettempdir()
assert tempdir == spack_path.canonicalize_path(
"$tempdir", replacements=spack.paths.path_replacements()
)
assert tempdir == spack_path.canonicalize_path("$tempdir")
assert tempdir + os.sep + os.path.join("foo", "bar", "baz") == spack_path.canonicalize_path(
os.path.join("$tempdir", "foo", "bar", "baz"), replacements=spack.paths.path_replacements()
os.path.join("$tempdir", "foo", "bar", "baz")
)
def test_substitute_date(mock_low_high_config):
test_path = os.path.join("hello", "world", "on", "$date")
new_path = spack_path.canonicalize_path(
test_path, replacements=spack.paths.path_replacements()
)
new_path = spack_path.canonicalize_path(test_path)
assert "$date" in test_path
assert date.today().strftime("%Y-%m-%d") in new_path

View File

@@ -39,7 +39,6 @@
import spack.directory_layout
import spack.environment as ev
import spack.error
import spack.gpg
import spack.package_base
import spack.package_prefs
import spack.paths
@@ -51,6 +50,7 @@
import spack.test.cray_manifest
import spack.util.executable
import spack.util.git
import spack.util.gpg
import spack.util.spack_yaml as syaml
import spack.util.url as url_util
from spack.fetch_strategy import URLFetchStrategy
@@ -1074,13 +1074,13 @@ def mock_gnupghome(monkeypatch):
# This comes up because tmp paths on macOS are already long-ish, and
# pytest makes them longer.
try:
spack.gpg.init(gpg_path=spack.paths.gpg_path)
except spack.gpg.SpackGPGError:
if not spack.gpg.GPG:
spack.util.gpg.init()
except spack.util.gpg.SpackGPGError:
if not spack.util.gpg.GPG:
pytest.skip("This test requires gpg")
short_name_tmpdir = tempfile.mkdtemp()
with spack.gpg.gnupghome_override(short_name_tmpdir):
with spack.util.gpg.gnupghome_override(short_name_tmpdir):
yield short_name_tmpdir
# clean up, since we are doing this manually

View File

@@ -321,3 +321,18 @@ def inner():
"""
).format(__file__)
)
def test_grouped_exception_base_type():
h = llnl.util.lang.GroupedExceptionHandler()
with h.forward("catch-runtime-error", RuntimeError):
raise NotImplementedError()
with pytest.raises(NotImplementedError):
with h.forward("catch-value-error", ValueError):
raise NotImplementedError()
message = h.grouped_message(with_tracebacks=False)
assert "catch-runtime-error" in message
assert "catch-value-error" not in message

View File

@@ -21,10 +21,10 @@
import spack.binary_distribution as bindist
import spack.cmd.buildcache as buildcache
import spack.error
import spack.gpg
import spack.package_base
import spack.repo
import spack.store
import spack.util.gpg
import spack.util.url as url_util
from spack.fetch_strategy import URLFetchStrategy
from spack.paths import mock_gpg_keys_path
@@ -72,7 +72,7 @@ def test_buildcache(mock_archive, tmp_path, monkeypatch, mutable_config):
create_args = ["create", "-f", "--rebuild-index", mirror_path, pkghash]
# Create a private key to sign package with if gpg2 available
spack.gpg.create(
spack.util.gpg.create(
name="test key 1",
expires="0",
email="spack@googlegroups.com",

View File

@@ -734,7 +734,7 @@ def test_resolve_paths(self):
assert spack.stage._resolve_paths(paths) == paths
tempdir = "$tempdir"
can_tempdir = canonicalize_path(tempdir, replacements=spack.paths.path_replacements())
can_tempdir = canonicalize_path(tempdir)
user = getpass.getuser()
temp_has_user = user in can_tempdir.split(os.sep)
paths = [
@@ -744,8 +744,7 @@ def test_resolve_paths(self):
os.path.join(tempdir, "$user", "stage", "$user"),
]
r = spack.paths.path_replacements()
res_paths = [canonicalize_path(p, replacements=r) for p in paths]
res_paths = [canonicalize_path(p) for p in paths]
if temp_has_user:
res_paths[1] = can_tempdir
res_paths[2] = os.path.join(can_tempdir, user)

View File

@@ -7,7 +7,6 @@
import pytest
import spack.config
import spack.paths
import spack.tengine as tengine
from spack.util.path import canonicalize_path
@@ -71,9 +70,8 @@ class TestTengineEnvironment:
def test_template_retrieval(self):
"""Tests the template retrieval mechanism hooked into config files"""
# Check the directories are correct
r = spack.paths.path_replacements()
template_dirs = spack.config.get("config:template_dirs")
template_dirs = tuple([canonicalize_path(x, replacements=r) for x in template_dirs])
template_dirs = tuple([canonicalize_path(x) for x in template_dirs])
assert len(template_dirs) == 3
env = tengine.make_environment(template_dirs)

View File

@@ -350,8 +350,8 @@ def _which(*args, **kwargs):
def test_url_fetch_text_without_url(tmpdir):
with pytest.raises(web_util.WebError, match="URL is required"):
web_util.fetch_url_text(None, fetch_method=spack.config.get("config:url_fetch_method"))
with pytest.raises(spack.error.FetchError, match="URL is required"):
web_util.fetch_url_text(None)
def test_url_fetch_text_curl_failures(tmpdir, monkeypatch):
@@ -367,20 +367,18 @@ def _which(*args, **kwargs):
monkeypatch.setattr(spack.util.web, "which", _which)
with spack.config.override("config:url_fetch_method", "curl"):
with pytest.raises(web_util.WebError, match="Missing required curl"):
web_util.fetch_url_text(
"https://github.com/", fetch_method=spack.config.get("config:url_fetch_method")
)
with pytest.raises(spack.error.FetchError, match="Missing required curl"):
web_util.fetch_url_text("https://github.com/")
def test_url_check_curl_errors():
"""Check that standard curl error returncodes raise expected errors."""
# Check returncode 22 (i.e., 404)
with pytest.raises(web_util.WebError, match="not found"):
with pytest.raises(spack.error.FetchError, match="not found"):
web_util.check_curl_code(22)
# Check returncode 60 (certificate error)
with pytest.raises(web_util.WebError, match="invalid certificate"):
with pytest.raises(spack.error.FetchError, match="invalid certificate"):
web_util.check_curl_code(60)
@@ -397,11 +395,8 @@ def _which(*args, **kwargs):
monkeypatch.setattr(spack.util.web, "which", _which)
with spack.config.override("config:url_fetch_method", "curl"):
with pytest.raises(web_util.WebError, match="Missing required curl"):
web_util.url_exists(
"https://github.com/",
fetch_method=spack.config.get("config:url_fetch_method", "urllib"),
)
with pytest.raises(spack.error.FetchError, match="Missing required curl"):
web_util.url_exists("https://github.com/")
def test_url_fetch_text_urllib_bad_returncode(tmpdir, monkeypatch):
@@ -415,20 +410,16 @@ def _read_from_url(*args, **kwargs):
monkeypatch.setattr(spack.util.web, "read_from_url", _read_from_url)
with spack.config.override("config:url_fetch_method", "urllib"):
with pytest.raises(web_util.WebError, match="failed with error code"):
web_util.fetch_url_text(
"https://github.com/", fetch_method=spack.config.get("config:url_fetch_method")
)
with pytest.raises(spack.error.FetchError, match="failed with error code"):
web_util.fetch_url_text("https://github.com/")
def test_url_fetch_text_urllib_web_error(tmpdir, monkeypatch):
def _raise_web_error(*args, **kwargs):
raise web_util.WebError("bad url")
raise web_util.SpackWebError("bad url")
monkeypatch.setattr(spack.util.web, "read_from_url", _raise_web_error)
with spack.config.override("config:url_fetch_method", "urllib"):
with pytest.raises(web_util.WebError, match="fetch failed to verify"):
web_util.fetch_url_text(
"https://github.com/", fetch_method=spack.config.get("config:url_fetch_method")
)
with pytest.raises(spack.error.FetchError, match="fetch failed to verify"):
web_util.fetch_url_text("https://github.com/")

View File

@@ -9,9 +9,9 @@
import pytest
import spack.directives
import spack.package_hash as ph
import spack.paths
import spack.repo
import spack.util.package_hash as ph
from spack.spec import Spec
from spack.util.unparse import unparse

View File

@@ -79,26 +79,25 @@ def test_output_filtering(self, capfd, install_mockery, mutable_config):
# test filtering when padding is enabled
with spack.config.override("config:install_tree", {"padded_length": 256}):
# tty.msg with filtering on the first argument
padding = spack.config.get("config:install_tree:padded_length", None)
with sup.filter_padding(padding=padding):
with sup.filter_padding():
tty.msg("here is a long path: %s/with/a/suffix" % long_path)
out, err = capfd.readouterr()
assert padding_string in out
# tty.msg with filtering on a laterargument
with sup.filter_padding(padding=padding):
with sup.filter_padding():
tty.msg("here is a long path:", "%s/with/a/suffix" % long_path)
out, err = capfd.readouterr()
assert padding_string in out
# tty.error with filtering on the first argument
with sup.filter_padding(padding=padding):
with sup.filter_padding():
tty.error("here is a long path: %s/with/a/suffix" % long_path)
out, err = capfd.readouterr()
assert padding_string in err
# tty.error with filtering on a later argument
with sup.filter_padding(padding=padding):
with sup.filter_padding():
tty.error("here is a long path:", "%s/with/a/suffix" % long_path)
out, err = capfd.readouterr()
assert padding_string in err

View File

@@ -11,7 +11,6 @@
from llnl.util.filesystem import getuid, group_ids
import spack.config
import spack.util.error
import spack.util.lock as lk
@@ -55,7 +54,7 @@ def test_lock_checks_user(tmpdir):
# unsafe
tmpdir.chmod(0o777)
with pytest.raises(spack.util.error.UtilityError):
with pytest.raises(spack.error.SpackError):
lk.check_lock_safety(path)
# safe
@@ -86,12 +85,12 @@ def test_lock_checks_group(tmpdir):
# unsafe
tmpdir.chmod(0o774)
with pytest.raises(spack.util.error.UtilityError):
with pytest.raises(spack.error.SpackError):
lk.check_lock_safety(path)
# unsafe
tmpdir.chmod(0o777)
with pytest.raises(spack.util.error.UtilityError):
with pytest.raises(spack.error.SpackError):
lk.check_lock_safety(path)
# safe

View File

@@ -7,14 +7,13 @@
import pytest
import spack.gpg
import spack.paths
import spack.util.gpg
@pytest.fixture()
def has_socket_dir():
spack.gpg.init(gpg_path=spack.paths.gpg_path)
return bool(spack.gpg.SOCKET_DIR)
spack.util.gpg.init()
return bool(spack.util.gpg.SOCKET_DIR)
def test_parse_gpg_output_case_one():
@@ -28,7 +27,7 @@ def test_parse_gpg_output_case_one():
uid:::::::AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA::Joe (Test) <j.s@s.com>:
ssb::2048:1:AAAAAAAAAAAAAAAA:AAAAAAAAAA::::::::::
"""
keys = spack.gpg._parse_secret_keys_output(output)
keys = spack.util.gpg._parse_secret_keys_output(output)
assert len(keys) == 2
assert keys[0] == "XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX"
@@ -45,7 +44,7 @@ def test_parse_gpg_output_case_two():
fpr:::::::::YYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYY:
grp:::::::::AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA:
"""
keys = spack.gpg._parse_secret_keys_output(output)
keys = spack.util.gpg._parse_secret_keys_output(output)
assert len(keys) == 1
assert keys[0] == "XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX"
@@ -64,7 +63,7 @@ def test_parse_gpg_output_case_three():
ssb::2048:1:AAAAAAAAAAAAAAAA:AAAAAAAAAA::::::::::
fpr:::::::::ZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZZ:"""
keys = spack.gpg._parse_secret_keys_output(output)
keys = spack.util.gpg._parse_secret_keys_output(output)
assert len(keys) == 2
assert keys[0] == "WWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWW"
@@ -84,8 +83,8 @@ def test_really_long_gnupghome_dir(tmpdir, has_socket_dir):
tdir = tdir[:N].rstrip(os.sep)
tdir += "0" * (N - len(tdir))
with spack.gpg.gnupghome_override(tdir):
spack.gpg.create(
with spack.util.gpg.gnupghome_override(tdir):
spack.util.gpg.create(
name="Spack testing 1", email="test@spack.io", comment="Spack testing key", expires="0"
)
spack.gpg.list(True, True)
spack.util.gpg.list(True, True)

View File

@@ -287,7 +287,7 @@ def test_gather_s3_information(monkeypatch, capfd):
}
)
session_args, client_args = spack.util.s3.get_mirror_s3_connection_info(mirror, "push", False)
session_args, client_args = spack.util.s3.get_mirror_s3_connection_info(mirror, "push")
# Session args are used to create the S3 Session object
assert "aws_session_token" in session_args
@@ -307,7 +307,7 @@ def test_gather_s3_information(monkeypatch, capfd):
def test_remove_s3_url(monkeypatch, capfd):
fake_s3_url = "s3://my-bucket/subdirectory/mirror"
def get_s3_session(url, method="fetch", verify_ssl=True):
def get_s3_session(url, method="fetch"):
return MockS3Client()
monkeypatch.setattr(spack.util.web, "get_s3_session", get_s3_session)
@@ -315,9 +315,7 @@ def get_s3_session(url, method="fetch", verify_ssl=True):
current_debug_level = tty.debug_level()
tty.set_debug(1)
spack.util.web.remove_url(
fake_s3_url, recursive=True, verify_ssl=spack.config.get("config:verify_ssl", True)
)
spack.util.web.remove_url(fake_s3_url, recursive=True)
err = capfd.readouterr()[1]
tty.set_debug(current_debug_level)
@@ -328,26 +326,16 @@ def get_s3_session(url, method="fetch", verify_ssl=True):
def test_s3_url_exists(monkeypatch, capfd):
def get_s3_session(url, method="fetch", verify_ssl=True):
def get_s3_session(url, method="fetch"):
return MockS3Client()
monkeypatch.setattr(spack.util.s3, "get_s3_session", get_s3_session)
fake_s3_url_exists = "s3://my-bucket/subdirectory/my-file"
assert spack.util.web.url_exists(
fake_s3_url_exists,
fetch_method=spack.config.get("config:url_fetch_method", "urllib"),
verify_ssl=spack.config.get("config:verify_ssl"),
timeout=spack.config.get("config:connect_timeout", 10),
)
assert spack.util.web.url_exists(fake_s3_url_exists)
fake_s3_url_does_not_exist = "s3://my-bucket/subdirectory/my-notfound-file"
assert not spack.util.web.url_exists(
fake_s3_url_does_not_exist,
fetch_method=spack.config.get("config:url_fetch_method", "urllib"),
verify_ssl=spack.config.get("config:verify_ssl"),
timeout=spack.config.get("config:connect_timeout", 10),
)
assert not spack.util.web.url_exists(fake_s3_url_does_not_exist)
def test_s3_url_parsing():

View File

@@ -251,7 +251,7 @@ def traverse_depth_first_edges_generator(edges, visitor, post_order=False, root=
neighbors = [EdgeAndDepth(edge=n, depth=edge.depth + 1) for n in visitor.neighbors(edge)]
# This extra branch is just for efficiency.
if len(neighbors) >= 0:
if len(neighbors) > 0:
for item in traverse_depth_first_edges_generator(
neighbors, visitor, post_order, root, depth
):

View File

@@ -13,7 +13,7 @@
import llnl.url
from llnl.util import tty
from spack.util.error import UtilityError
from spack.error import SpackError
from spack.util.executable import CommandNotFoundError, which
try:
@@ -400,7 +400,7 @@ def decompressor_for_win(extension):
compression_extension = llnl.url.compression_ext_from_compressed_archive(extension)
decompressor = _determine_py_decomp_archive_strategy(compression_extension)
if not decompressor:
raise UtilityError(
raise SpackError(
"Spack was unable to determine a proper decompression strategy for"
f"valid extension: {extension}"
"This is a bug, please file an issue at https://github.com/spack/spack/issues"

View File

@@ -7,6 +7,8 @@
import os
from typing import Optional
import spack.config
def cpus_available():
"""
@@ -25,8 +27,7 @@ def determine_number_of_jobs(
*,
parallel: bool = False,
max_cpus: int = cpus_available(),
config=None,
config_path: str = "config:build_jobs",
config: Optional["spack.config.Configuration"] = None,
) -> int:
"""
Packages that require sequential builds need 1 job. Otherwise we use the
@@ -38,24 +39,18 @@ def determine_number_of_jobs(
parallel: true when package supports parallel builds
max_cpus: maximum number of CPUs to use (defaults to cpus_available())
config: configuration object (defaults to global config)
config_path: configuration path to read number of jobs from
"""
if not parallel:
return 1
# Command line overrides all
config_jobs = 16
try:
command_line = None
if config is not None:
command_line = config.get(config_path, default=None, scope="command_line")
cfg = config or spack.config.CONFIG
# Command line overrides all
try:
command_line = cfg.get("config:build_jobs", default=None, scope="command_line")
if command_line is not None:
return command_line
except ValueError:
pass
if config is not None:
config_jobs = config.get(config_path, 16)
return min(max_cpus, config_jobs)
return min(max_cpus, cfg.get("config:build_jobs", 16))

View File

@@ -18,6 +18,7 @@
import llnl.util.tty as tty
import spack.config
import spack.util.executable
#: editors to try if VISUAL and EDITOR are not set
@@ -60,9 +61,7 @@ def executable(exe: str, args: List[str]) -> int:
return cmd.returncode
def editor(
*args: str, exec_fn: Callable[[str, List[str]], int] = os.execv, debug: bool = False
) -> bool:
def editor(*args: str, exec_fn: Callable[[str, List[str]], int] = os.execv) -> bool:
"""Invoke the user's editor.
This will try to execute the following, in order:
@@ -101,7 +100,7 @@ def try_exec(exe, args, var=None):
return exec_fn(exe, args) == 0
except (OSError, spack.util.executable.ProcessError) as e:
if debug:
if spack.config.get("config:debug"):
raise
# Show variable we were trying to use, if it's from one

View File

@@ -1,87 +0,0 @@
# Copyright 2013-2023 Lawrence Livermore National Security, LLC and other
# Spack Project Developers. See the top-level COPYRIGHT file for details.
#
# SPDX-License-Identifier: (Apache-2.0 OR MIT)
import inspect
import sys
import llnl.util.tty as tty
#: at what level we should write stack traces or short error messages
#: this is module-scoped because it needs to be set very early
debug = 0
class UtilityError(Exception):
"""This is the superclass for all Spack errors.
Subclasses can be found in the modules they have to do with.
"""
def __init__(self, message, long_message=None):
super().__init__()
self.message = message
self._long_message = long_message
# for exceptions raised from child build processes, we save the
# traceback as a string and print it in the parent.
self.traceback = None
# we allow exceptions to print debug info via print_context()
# before they are caught at the top level. If they *haven't*
# printed context early, we do it by default when die() is
# called, so we need to remember whether it's been called.
self.printed = False
@property
def long_message(self):
return self._long_message
def print_context(self):
"""Print extended debug information about this exception.
This is usually printed when the top-level Spack error handler
calls ``die()``, but it can be called separately beforehand if a
lower-level error handler needs to print error context and
continue without raising the exception to the top level.
"""
if self.printed:
return
# basic debug message
tty.error(self.message)
if self.long_message:
sys.stderr.write(self.long_message)
sys.stderr.write("\n")
# stack trace, etc. in debug mode.
if debug:
if self.traceback:
# exception came from a build child, already got
# traceback in child, so print it.
sys.stderr.write(self.traceback)
else:
# run parent exception hook.
sys.excepthook(*sys.exc_info())
sys.stderr.flush()
self.printed = True
def die(self):
self.print_context()
sys.exit(1)
def __str__(self):
msg = self.message
if self._long_message:
msg += "\n %s" % self._long_message
return msg
def __repr__(self):
args = [repr(self.message), repr(self.long_message)]
args = ",".join(args)
qualified_name = inspect.getmodule(self).__name__ + "." + type(self).__name__
return qualified_name + "(" + args + ")"
def __reduce__(self):
return type(self), (self.message, self.long_message)

View File

@@ -11,7 +11,7 @@
import llnl.util.tty as tty
import spack.util.error
import spack.error
__all__ = ["Executable", "which", "ProcessError"]
@@ -362,11 +362,7 @@ def which(*args, **kwargs):
return Executable(exe) if exe else None
class EditorError(spack.util.error.UtilityError):
"""Base error for all errors from the executable utility"""
class ProcessError(EditorError):
class ProcessError(spack.error.SpackError):
"""ProcessErrors are raised when Executables exit with an error code."""
@@ -375,5 +371,5 @@ class ProcessTimeoutError(ProcessError):
specified timeout exceed that time"""
class CommandNotFoundError(EditorError):
class CommandNotFoundError(spack.error.SpackError):
"""Raised when ``which()`` can't find a required executable."""

View File

@@ -10,6 +10,7 @@
from llnl.util.filesystem import mkdirp, rename
from spack.error import SpackError
from spack.util.lock import Lock, ReadTransaction, WriteTransaction
@@ -177,5 +178,5 @@ def remove(self, key):
lock.release_write()
class CacheError(Exception):
class CacheError(SpackError):
pass

View File

@@ -8,7 +8,19 @@
import llnl.util.filesystem as fs
from spack.util.error import UtilityError
import spack.package_prefs as pp
from spack.error import SpackError
def set_permissions_by_spec(path, spec):
# Get permissions for spec
if os.path.isdir(path):
perms = pp.get_package_dir_permissions(spec)
else:
perms = pp.get_package_permissions(spec)
group = pp.get_package_group(spec)
set_permissions(path, perms, group)
def set_permissions(path, perms, group=None):
@@ -32,5 +44,5 @@ def set_permissions(path, perms, group=None):
fs.chgrp(path, group, follow_symlinks=False)
class InvalidPermissionsError(UtilityError):
class InvalidPermissionsError(SpackError):
"""Error class for invalid permission setters"""

View File

@@ -8,8 +8,10 @@
import os
import re
import spack.util.error
import spack.error
import spack.paths
import spack.util.executable
import spack.version
#: Executable instance for "gpg", initialized lazily
GPG = None
@@ -27,7 +29,7 @@ def clear():
GPG, GPGCONF, SOCKET_DIR, GNUPGHOME = None, None, None, None
def init(gnupghome=None, force=False, gpg_path=None):
def init(gnupghome=None, force=False):
"""Initialize the global objects in the module, if not set.
When calling any gpg executable, the GNUPGHOME environment
@@ -54,7 +56,7 @@ def init(gnupghome=None, force=False, gpg_path=None):
return
# Set the value of GNUPGHOME to be used in this module
GNUPGHOME = gnupghome or os.getenv("SPACK_GNUPGHOME") or gpg_path
GNUPGHOME = gnupghome or os.getenv("SPACK_GNUPGHOME") or spack.paths.gpg_path
# Set the executable objects for "gpg" and "gpgconf"
with spack.bootstrap.ensure_bootstrap_configuration():
@@ -163,7 +165,7 @@ def _get_unimported_public_keys(output):
return keys
class SpackGPGError(spack.util.error.UtilityError):
class SpackGPGError(spack.error.SpackError):
"""Class raised when GPG errors are detected."""
@@ -332,11 +334,11 @@ def _verify_exe_or_raise(exe):
raise SpackGPGError(msg)
output = exe("--version", output=str)
match = re.search(r"^gpg(conf)? \(GnuPG\) (\d+).*$", output, re.M)
match = re.search(r"^gpg(conf)? \(GnuPG\) (.*)$", output, re.M)
if not match:
raise SpackGPGError('Could not determine "{0}" version'.format(exe.name))
if int(match.group(2)) < 2:
if spack.version.Version(match.group(2)) < spack.version.Version("2"):
raise SpackGPGError(msg)

View File

@@ -18,7 +18,8 @@
from llnl.util.lock import ReadTransaction # noqa: F401
from llnl.util.lock import WriteTransaction # noqa: F401
import spack.util.error
import spack.error
import spack.paths
class Lock(llnl.util.lock.Lock):
@@ -99,4 +100,4 @@ def check_lock_safety(path: str) -> None:
f"Running a shared spack without locks is unsafe. You must "
f"restrict permissions on {path} or enable locks."
)
raise spack.util.error.UtilityError(msg, long_msg)
raise spack.error.SpackError(msg, long_msg)

View File

@@ -8,7 +8,7 @@
import re
import string
import spack.util.error
import spack.error
__all__ = [
"mod_to_class",
@@ -159,7 +159,7 @@ def validate_fully_qualified_module_name(mod_name):
raise InvalidFullyQualifiedModuleNameError(mod_name)
class InvalidModuleNameError(spack.util.error.UtilityError):
class InvalidModuleNameError(spack.error.SpackError):
"""Raised when we encounter a bad module name."""
def __init__(self, name):
@@ -167,7 +167,7 @@ def __init__(self, name):
self.name = name
class InvalidFullyQualifiedModuleNameError(spack.util.error.UtilityError):
class InvalidFullyQualifiedModuleNameError(spack.error.SpackError):
"""Raised when we encounter a bad full package name."""
def __init__(self, name):

View File

@@ -8,27 +8,75 @@
TODO: this is really part of spack.config. Consolidate it.
"""
import contextlib
import getpass
import os
import re
import subprocess
import sys
import tempfile
from datetime import date
import llnl.util.tty as tty
from llnl.util.lang import memoized
import spack.util.spack_yaml as syaml
__all__ = [
"substitute_config_variables",
"substitute_path_variables",
"canonicalize_path",
"NOMATCH",
]
__all__ = ["substitute_config_variables", "substitute_path_variables", "canonicalize_path"]
def architecture():
# break circular import
import spack.platforms
import spack.spec
host_platform = spack.platforms.host()
host_os = host_platform.operating_system("default_os")
host_target = host_platform.target("default_target")
return spack.spec.ArchSpec((str(host_platform), str(host_os), str(host_target)))
def get_user():
# User pwd where available because it accounts for effective uids when using ksu and similar
try:
# user pwd for unix systems
import pwd
return pwd.getpwuid(os.geteuid()).pw_name
except ImportError:
# fallback on getpass
return getpass.getuser()
# return value for replacements with no match
NOMATCH = object()
# Substitutions to perform
def replacements():
# break circular imports
import spack.environment as ev
import spack.paths
arch = architecture()
return {
"spack": lambda: spack.paths.prefix,
"user": lambda: get_user(),
"tempdir": lambda: tempfile.gettempdir(),
"user_cache_path": lambda: spack.paths.user_cache_path,
"architecture": lambda: arch,
"arch": lambda: arch,
"platform": lambda: arch.platform,
"operating_system": lambda: arch.os,
"os": lambda: arch.os,
"target": lambda: arch.target,
"target_family": lambda: arch.target.microarchitecture.family,
"date": lambda: date.today().strftime("%Y-%m-%d"),
"env": lambda: ev.active_environment().path if ev.active_environment() else NOMATCH,
}
# This is intended to be longer than the part of the install path
# spack generates from the root path we give it. Included in the
# estimate:
@@ -96,7 +144,7 @@ def get_system_path_max():
return sys_max_path_length
def substitute_config_variables(path, replacements={}):
def substitute_config_variables(path):
"""Substitute placeholders into paths.
Spack allows paths in configs to have some placeholders, as follows:
@@ -120,21 +168,22 @@ def substitute_config_variables(path, replacements={}):
replaced if there is an active environment, and should only be used in
environment yaml files.
"""
_replacements = replacements()
# Look up replacements
def repl(match):
m = match.group(0)
key = m.strip("${}").lower()
repl = replacements.get(key, lambda: m)()
repl = _replacements.get(key, lambda: m)()
return m if repl is NOMATCH else str(repl)
# Replace $var or ${var}.
return re.sub(r"(\$\w+\b|\$\{\w+\})", repl, path)
def substitute_path_variables(path, replacements={}):
def substitute_path_variables(path):
"""Substitute config vars, expand environment vars, expand user home."""
path = substitute_config_variables(path, replacements=replacements)
path = substitute_config_variables(path)
path = os.path.expandvars(path)
path = os.path.expanduser(path)
return path
@@ -176,7 +225,7 @@ def add_padding(path, length):
return os.path.join(path, padding)
def canonicalize_path(path, default_wd=None, replacements=None):
def canonicalize_path(path, default_wd=None):
"""Same as substitute_path_variables, but also take absolute path.
If the string is a yaml object with file annotations, make absolute paths
@@ -185,7 +234,6 @@ def canonicalize_path(path, default_wd=None, replacements=None):
Arguments:
path (str): path being converted as needed
replacements (dict): dictionary of replacements to use
Returns:
(str): An absolute path with path variable substitution
@@ -197,18 +245,7 @@ def canonicalize_path(path, default_wd=None, replacements=None):
filename = os.path.dirname(path._start_mark.name)
assert path._start_mark.name == path._end_mark.name
if replacements is None:
_replacements = {}
else:
_replacements = replacements
if not isinstance(_replacements, dict):
tty.die(
"Replacements returned by replacements func are of type"
f"{type(replacements)} and not of the expected type of dict."
)
path = substitute_path_variables(path, replacements=_replacements)
path = substitute_path_variables(path)
if not os.path.isabs(path):
if filename:
path = os.path.join(filename, path)
@@ -289,12 +326,15 @@ def replacer(match):
@contextlib.contextmanager
def filter_padding(padding=None):
def filter_padding():
"""Context manager to safely disable path padding in all Spack output.
This is needed because Spack's debug output gets extremely long when we use a
long padded installation path.
"""
import spack.config
padding = spack.config.get("config:install_tree:padded_length", None)
if padding:
# filter out all padding from the intsall command output
with tty.output_filter(padding_filter):

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