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9015 changed files with 97324 additions and 144295 deletions

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@@ -1,5 +1,3 @@
# .git-blame-ignore-revs
# Formatted entire codebase with black 23
603569e321013a1a63a637813c94c2834d0a0023
# Formatted entire codebase with black 22
# Formatted entire codebase with black
f52f6e99dbf1131886a80112b8c79dfc414afb7c

1
.gitattributes vendored
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@@ -1,4 +1,3 @@
*.py diff=python
*.lp linguist-language=Prolog
lib/spack/external/* linguist-vendored
*.bat text eol=crlf

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@@ -9,7 +9,7 @@ body:
Thanks for taking the time to report this build failure. To proceed with the report please:
1. Title the issue `Installation issue: <name-of-the-package>`.
2. Provide the information required below.
We encourage you to try, as much as possible, to reduce your problem to the minimal example that still reproduces the issue. That would help us a lot in fixing it quickly and effectively!
- type: textarea
id: reproduce
@@ -29,9 +29,7 @@ body:
description: |
Please post the error message from spack inside the `<details>` tag below:
value: |
<details><summary>Error message</summary>
<pre>
<details><summary>Error message</summary><pre>
...
</pre></details>
validations:
@@ -55,7 +53,7 @@ body:
Please upload the following files:
* **`spack-build-out.txt`**
* **`spack-build-env.txt`**
They should be present in the stage directory of the failing build. Also upload any `config.log` or similar file if one exists.
- type: markdown
attributes:

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@@ -1,4 +1,4 @@
name: "\U0001F38A Feature request"
name: "\U0001F38A Feature request"
description: Suggest adding a feature that is not yet in Spack
labels: [feature]
body:
@@ -29,11 +29,13 @@ body:
attributes:
label: General information
options:
- label: I have run `spack --version` and reported the version of Spack
required: true
- label: I have searched the issues of this repo and believe this is not a duplicate
required: true
- type: markdown
attributes:
value: |
If you want to ask a question about the tool (how to use it, what it can currently do, etc.), try the `#general` channel on [our Slack](https://slack.spack.io/) first. We have a welcoming community and chances are you'll get your reply faster and without opening an issue.
Other than that, thanks for taking the time to contribute to Spack!

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@@ -21,9 +21,7 @@ body:
description: |
Please post the error message from spack inside the `<details>` tag below:
value: |
<details><summary>Error message</summary>
<pre>
<details><summary>Error message</summary><pre>
...
</pre></details>
validations:

View File

@@ -5,8 +5,3 @@ updates:
directory: "/"
schedule:
interval: "daily"
# Requirements to build documentation
- package-ecosystem: "pip"
directory: "/lib/spack/docs"
schedule:
interval: "daily"

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@@ -17,18 +17,15 @@ concurrency:
jobs:
# Run audits on all the packages in the built-in repository
package-audits:
runs-on: ${{ matrix.operating_system }}
strategy:
matrix:
operating_system: ["ubuntu-latest", "macos-latest"]
runs-on: ubuntu-latest
steps:
- uses: actions/checkout@3df4ab11eba7bda6032a0b82a6bb43b11571feac # @v2
- uses: actions/setup-python@61a6322f88396a6271a6ee3565807d608ecaddd1 # @v2
- uses: actions/checkout@755da8c3cf115ac066823e79a1e1788f8940201b # @v2
- uses: actions/setup-python@5ccb29d8773c3f3f653e1705f474dfaa8a06a912 # @v2
with:
python-version: ${{inputs.python_version}}
- name: Install Python packages
run: |
pip install --upgrade pip setuptools pytest coverage[toml]
pip install --upgrade pip six setuptools pytest codecov coverage[toml]
- name: Package audits (with coverage)
if: ${{ inputs.with_coverage == 'true' }}
run: |
@@ -41,7 +38,7 @@ jobs:
run: |
. share/spack/setup-env.sh
$(which spack) audit packages
- uses: codecov/codecov-action@eaaf4bedf32dbdc6b720b63067d99c4d77d6047d # @v2.1.0
- uses: codecov/codecov-action@d9f34f8cd5cb3b3eb79b3e4b5dae3a16df499a70 # @v2.1.0
if: ${{ inputs.with_coverage == 'true' }}
with:
flags: unittests,audits
flags: unittests,linux,audits

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@@ -24,7 +24,7 @@ jobs:
make patch unzip which xz python3 python3-devel tree \
cmake bison bison-devel libstdc++-static
- name: Checkout
uses: actions/checkout@3df4ab11eba7bda6032a0b82a6bb43b11571feac
uses: actions/checkout@755da8c3cf115ac066823e79a1e1788f8940201b
with:
fetch-depth: 0
- name: Setup non-root user
@@ -62,7 +62,7 @@ jobs:
make patch unzip xz-utils python3 python3-dev tree \
cmake bison
- name: Checkout
uses: actions/checkout@3df4ab11eba7bda6032a0b82a6bb43b11571feac
uses: actions/checkout@755da8c3cf115ac066823e79a1e1788f8940201b
with:
fetch-depth: 0
- name: Setup non-root user
@@ -99,7 +99,7 @@ jobs:
bzip2 curl file g++ gcc gfortran git gnupg2 gzip \
make patch unzip xz-utils python3 python3-dev tree
- name: Checkout
uses: actions/checkout@3df4ab11eba7bda6032a0b82a6bb43b11571feac
uses: actions/checkout@755da8c3cf115ac066823e79a1e1788f8940201b
with:
fetch-depth: 0
- name: Setup non-root user
@@ -133,7 +133,7 @@ jobs:
make patch unzip which xz python3 python3-devel tree \
cmake bison
- name: Checkout
uses: actions/checkout@3df4ab11eba7bda6032a0b82a6bb43b11571feac
uses: actions/checkout@755da8c3cf115ac066823e79a1e1788f8940201b
with:
fetch-depth: 0
- name: Setup repo
@@ -158,7 +158,7 @@ jobs:
run: |
brew install cmake bison@2.7 tree
- name: Checkout
uses: actions/checkout@3df4ab11eba7bda6032a0b82a6bb43b11571feac
uses: actions/checkout@755da8c3cf115ac066823e79a1e1788f8940201b
- name: Bootstrap clingo
run: |
source share/spack/setup-env.sh
@@ -179,7 +179,7 @@ jobs:
run: |
brew install tree
- name: Checkout
uses: actions/checkout@3df4ab11eba7bda6032a0b82a6bb43b11571feac
uses: actions/checkout@755da8c3cf115ac066823e79a1e1788f8940201b
- name: Bootstrap clingo
run: |
set -ex
@@ -204,7 +204,7 @@ jobs:
runs-on: ubuntu-20.04
steps:
- name: Checkout
uses: actions/checkout@3df4ab11eba7bda6032a0b82a6bb43b11571feac
uses: actions/checkout@755da8c3cf115ac066823e79a1e1788f8940201b
with:
fetch-depth: 0
- name: Setup repo
@@ -247,7 +247,7 @@ jobs:
bzip2 curl file g++ gcc patchelf gfortran git gzip \
make patch unzip xz-utils python3 python3-dev tree
- name: Checkout
uses: actions/checkout@3df4ab11eba7bda6032a0b82a6bb43b11571feac
uses: actions/checkout@755da8c3cf115ac066823e79a1e1788f8940201b
with:
fetch-depth: 0
- name: Setup non-root user
@@ -283,7 +283,7 @@ jobs:
make patch unzip xz-utils python3 python3-dev tree \
gawk
- name: Checkout
uses: actions/checkout@3df4ab11eba7bda6032a0b82a6bb43b11571feac
uses: actions/checkout@755da8c3cf115ac066823e79a1e1788f8940201b
with:
fetch-depth: 0
- name: Setup non-root user
@@ -316,7 +316,7 @@ jobs:
# Remove GnuPG since we want to bootstrap it
sudo rm -rf /usr/local/bin/gpg
- name: Checkout
uses: actions/checkout@3df4ab11eba7bda6032a0b82a6bb43b11571feac
uses: actions/checkout@755da8c3cf115ac066823e79a1e1788f8940201b
- name: Bootstrap GnuPG
run: |
source share/spack/setup-env.sh
@@ -333,7 +333,7 @@ jobs:
# Remove GnuPG since we want to bootstrap it
sudo rm -rf /usr/local/bin/gpg
- name: Checkout
uses: actions/checkout@3df4ab11eba7bda6032a0b82a6bb43b11571feac
uses: actions/checkout@755da8c3cf115ac066823e79a1e1788f8940201b
- name: Bootstrap GnuPG
run: |
source share/spack/setup-env.sh

View File

@@ -45,18 +45,12 @@ jobs:
[leap15, 'linux/amd64,linux/arm64,linux/ppc64le', 'opensuse/leap:15'],
[ubuntu-bionic, 'linux/amd64,linux/arm64,linux/ppc64le', 'ubuntu:18.04'],
[ubuntu-focal, 'linux/amd64,linux/arm64,linux/ppc64le', 'ubuntu:20.04'],
[ubuntu-jammy, 'linux/amd64,linux/arm64,linux/ppc64le', 'ubuntu:22.04'],
[almalinux8, 'linux/amd64,linux/arm64,linux/ppc64le', 'almalinux:8'],
[almalinux9, 'linux/amd64,linux/arm64,linux/ppc64le', 'almalinux:9'],
[rockylinux8, 'linux/amd64,linux/arm64', 'rockylinux:8'],
[rockylinux9, 'linux/amd64,linux/arm64', 'rockylinux:9'],
[fedora37, 'linux/amd64,linux/arm64,linux/ppc64le', 'fedora:37'],
[fedora38, 'linux/amd64,linux/arm64,linux/ppc64le', 'fedora:38']]
[ubuntu-jammy, 'linux/amd64,linux/arm64,linux/ppc64le', 'ubuntu:22.04']]
name: Build ${{ matrix.dockerfile[0] }}
if: github.repository == 'spack/spack'
steps:
- name: Checkout
uses: actions/checkout@3df4ab11eba7bda6032a0b82a6bb43b11571feac # @v2
uses: actions/checkout@755da8c3cf115ac066823e79a1e1788f8940201b # @v2
- name: Set Container Tag Normal (Nightly)
run: |
@@ -86,19 +80,19 @@ jobs:
fi
- name: Upload Dockerfile
uses: actions/upload-artifact@a8a3f3ad30e3422c9c7b888a15615d19a852ae32
uses: actions/upload-artifact@83fd05a356d7e2593de66fc9913b3002723633cb
with:
name: dockerfiles
path: dockerfiles
- name: Set up QEMU
uses: docker/setup-qemu-action@2b82ce82d56a2a04d2637cd93a637ae1b359c0a7 # @v1
uses: docker/setup-qemu-action@e81a89b1732b9c48d79cd809d8d81d79c4647a18 # @v1
- name: Set up Docker Buildx
uses: docker/setup-buildx-action@885d1462b80bc1c1c7f0b00334ad271f09369c55 # @v1
uses: docker/setup-buildx-action@8c0edbc76e98fa90f69d9a2c020dcb50019dc325 # @v1
- name: Log in to GitHub Container Registry
uses: docker/login-action@465a07811f14bebb1938fbed4728c6a1ff8901fc # @v1
uses: docker/login-action@f4ef78c080cd8ba55a85445d5b36e214a81df20a # @v1
with:
registry: ghcr.io
username: ${{ github.actor }}
@@ -106,13 +100,13 @@ jobs:
- name: Log in to DockerHub
if: github.event_name != 'pull_request'
uses: docker/login-action@465a07811f14bebb1938fbed4728c6a1ff8901fc # @v1
uses: docker/login-action@f4ef78c080cd8ba55a85445d5b36e214a81df20a # @v1
with:
username: ${{ secrets.DOCKERHUB_USERNAME }}
password: ${{ secrets.DOCKERHUB_TOKEN }}
- name: Build & Deploy ${{ matrix.dockerfile[0] }}
uses: docker/build-push-action@0a97817b6ade9f46837855d676c4cca3a2471fc9 # @v2
uses: docker/build-push-action@c56af957549030174b10d6867f20e78cfd7debc5 # @v2
with:
context: dockerfiles/${{ matrix.dockerfile[0] }}
platforms: ${{ matrix.dockerfile[1] }}

View File

@@ -35,7 +35,7 @@ jobs:
core: ${{ steps.filter.outputs.core }}
packages: ${{ steps.filter.outputs.packages }}
steps:
- uses: actions/checkout@3df4ab11eba7bda6032a0b82a6bb43b11571feac # @v2
- uses: actions/checkout@755da8c3cf115ac066823e79a1e1788f8940201b # @v2
if: ${{ github.event_name == 'push' }}
with:
fetch-depth: 0

View File

@@ -1,31 +0,0 @@
name: Windows Paraview Nightly
on:
schedule:
- cron: '0 2 * * *' # Run at 2 am
defaults:
run:
shell:
powershell Invoke-Expression -Command "./share/spack/qa/windows_test_setup.ps1"; {0}
jobs:
build-paraview-deps:
runs-on: windows-latest
steps:
- uses: actions/checkout@3df4ab11eba7bda6032a0b82a6bb43b11571feac
with:
fetch-depth: 0
- uses: actions/setup-python@61a6322f88396a6271a6ee3565807d608ecaddd1
with:
python-version: 3.9
- name: Install Python packages
run: |
python -m pip install --upgrade pip six pywin32 setuptools coverage
- name: Build Test
run: |
spack compiler find
spack external find cmake ninja win-sdk win-wdk wgl msmpi
spack -d install -y --cdash-upload-url https://cdash.spack.io/submit.php?project=Spack+on+Windows --cdash-track Nightly --only dependencies paraview
exit 0

View File

@@ -47,10 +47,10 @@ jobs:
on_develop: false
steps:
- uses: actions/checkout@3df4ab11eba7bda6032a0b82a6bb43b11571feac # @v2
- uses: actions/checkout@755da8c3cf115ac066823e79a1e1788f8940201b # @v2
with:
fetch-depth: 0
- uses: actions/setup-python@61a6322f88396a6271a6ee3565807d608ecaddd1 # @v2
- uses: actions/setup-python@5ccb29d8773c3f3f653e1705f474dfaa8a06a912 # @v2
with:
python-version: ${{ matrix.python-version }}
- name: Install System packages
@@ -62,7 +62,7 @@ jobs:
cmake bison libbison-dev kcov
- name: Install Python packages
run: |
pip install --upgrade pip setuptools pytest pytest-xdist pytest-cov
pip install --upgrade pip six setuptools pytest codecov[toml] pytest-xdist pytest-cov
pip install --upgrade flake8 "isort>=4.3.5" "mypy>=0.900" "click" "black"
- name: Setup git configuration
run: |
@@ -87,17 +87,17 @@ jobs:
UNIT_TEST_COVERAGE: ${{ matrix.python-version == '3.11' }}
run: |
share/spack/qa/run-unit-tests
- uses: codecov/codecov-action@eaaf4bedf32dbdc6b720b63067d99c4d77d6047d
- uses: codecov/codecov-action@d9f34f8cd5cb3b3eb79b3e4b5dae3a16df499a70
with:
flags: unittests,linux,${{ matrix.concretizer }}
# Test shell integration
shell:
runs-on: ubuntu-latest
steps:
- uses: actions/checkout@3df4ab11eba7bda6032a0b82a6bb43b11571feac # @v2
- uses: actions/checkout@755da8c3cf115ac066823e79a1e1788f8940201b # @v2
with:
fetch-depth: 0
- uses: actions/setup-python@61a6322f88396a6271a6ee3565807d608ecaddd1 # @v2
- uses: actions/setup-python@5ccb29d8773c3f3f653e1705f474dfaa8a06a912 # @v2
with:
python-version: '3.11'
- name: Install System packages
@@ -107,7 +107,7 @@ jobs:
sudo apt-get install -y coreutils kcov csh zsh tcsh fish dash bash
- name: Install Python packages
run: |
pip install --upgrade pip setuptools pytest coverage[toml] pytest-xdist
pip install --upgrade pip six setuptools pytest codecov coverage[toml] pytest-xdist
- name: Setup git configuration
run: |
# Need this for the git tests to succeed.
@@ -118,7 +118,7 @@ jobs:
COVERAGE: true
run: |
share/spack/qa/run-shell-tests
- uses: codecov/codecov-action@eaaf4bedf32dbdc6b720b63067d99c4d77d6047d
- uses: codecov/codecov-action@d9f34f8cd5cb3b3eb79b3e4b5dae3a16df499a70
with:
flags: shelltests,linux
@@ -133,11 +133,10 @@ jobs:
dnf install -y \
bzip2 curl file gcc-c++ gcc gcc-gfortran git gnupg2 gzip \
make patch tcl unzip which xz
- uses: actions/checkout@3df4ab11eba7bda6032a0b82a6bb43b11571feac # @v2
- uses: actions/checkout@755da8c3cf115ac066823e79a1e1788f8940201b # @v2
- name: Setup repo and non-root user
run: |
git --version
git config --global --add safe.directory /__w/spack/spack
git fetch --unshallow
. .github/workflows/setup_git.sh
useradd spack-test
@@ -152,10 +151,10 @@ jobs:
clingo-cffi:
runs-on: ubuntu-latest
steps:
- uses: actions/checkout@3df4ab11eba7bda6032a0b82a6bb43b11571feac # @v2
- uses: actions/checkout@755da8c3cf115ac066823e79a1e1788f8940201b # @v2
with:
fetch-depth: 0
- uses: actions/setup-python@61a6322f88396a6271a6ee3565807d608ecaddd1 # @v2
- uses: actions/setup-python@5ccb29d8773c3f3f653e1705f474dfaa8a06a912 # @v2
with:
python-version: '3.11'
- name: Install System packages
@@ -164,8 +163,7 @@ jobs:
sudo apt-get -y install coreutils cvs gfortran graphviz gnupg2 mercurial ninja-build kcov
- name: Install Python packages
run: |
pip install --upgrade pip setuptools pytest coverage[toml] pytest-cov clingo pytest-xdist
pip install --upgrade flake8 "isort>=4.3.5" "mypy>=0.900" "click" "black"
pip install --upgrade pip six setuptools pytest codecov coverage[toml] pytest-cov clingo pytest-xdist
- name: Setup git configuration
run: |
# Need this for the git tests to succeed.
@@ -177,7 +175,7 @@ jobs:
SPACK_TEST_SOLVER: clingo
run: |
share/spack/qa/run-unit-tests
- uses: codecov/codecov-action@eaaf4bedf32dbdc6b720b63067d99c4d77d6047d # @v2.1.0
- uses: codecov/codecov-action@d9f34f8cd5cb3b3eb79b3e4b5dae3a16df499a70 # @v2.1.0
with:
flags: unittests,linux,clingo
# Run unit tests on MacOS
@@ -187,16 +185,16 @@ jobs:
matrix:
python-version: ["3.10"]
steps:
- uses: actions/checkout@3df4ab11eba7bda6032a0b82a6bb43b11571feac # @v2
- uses: actions/checkout@755da8c3cf115ac066823e79a1e1788f8940201b # @v2
with:
fetch-depth: 0
- uses: actions/setup-python@61a6322f88396a6271a6ee3565807d608ecaddd1 # @v2
- uses: actions/setup-python@5ccb29d8773c3f3f653e1705f474dfaa8a06a912 # @v2
with:
python-version: ${{ matrix.python-version }}
- name: Install Python packages
run: |
pip install --upgrade pip setuptools
pip install --upgrade pytest coverage[toml] pytest-xdist pytest-cov
pip install --upgrade pip six setuptools
pip install --upgrade pytest codecov coverage[toml] pytest-xdist pytest-cov
- name: Setup Homebrew packages
run: |
brew install dash fish gcc gnupg2 kcov
@@ -212,6 +210,6 @@ jobs:
$(which spack) solve zlib
common_args=(--dist loadfile --tx '4*popen//python=./bin/spack-tmpconfig python -u ./bin/spack python' -x)
$(which spack) unit-test --cov --cov-config=pyproject.toml --cov-report=xml:coverage.xml "${common_args[@]}"
- uses: codecov/codecov-action@eaaf4bedf32dbdc6b720b63067d99c4d77d6047d
- uses: codecov/codecov-action@d9f34f8cd5cb3b3eb79b3e4b5dae3a16df499a70
with:
flags: unittests,macos

View File

@@ -18,8 +18,8 @@ jobs:
validate:
runs-on: ubuntu-latest
steps:
- uses: actions/checkout@3df4ab11eba7bda6032a0b82a6bb43b11571feac # @v2
- uses: actions/setup-python@61a6322f88396a6271a6ee3565807d608ecaddd1 # @v2
- uses: actions/checkout@755da8c3cf115ac066823e79a1e1788f8940201b # @v2
- uses: actions/setup-python@5ccb29d8773c3f3f653e1705f474dfaa8a06a912 # @v2
with:
python-version: '3.11'
cache: 'pip'
@@ -35,16 +35,16 @@ jobs:
style:
runs-on: ubuntu-latest
steps:
- uses: actions/checkout@3df4ab11eba7bda6032a0b82a6bb43b11571feac # @v2
- uses: actions/checkout@755da8c3cf115ac066823e79a1e1788f8940201b # @v2
with:
fetch-depth: 0
- uses: actions/setup-python@61a6322f88396a6271a6ee3565807d608ecaddd1 # @v2
- uses: actions/setup-python@5ccb29d8773c3f3f653e1705f474dfaa8a06a912 # @v2
with:
python-version: '3.11'
cache: 'pip'
- name: Install Python packages
run: |
python3 -m pip install --upgrade pip setuptools types-six black==23.1.0 mypy isort clingo flake8
python3 -m pip install --upgrade pip six setuptools types-six black mypy isort clingo flake8
- name: Setup git configuration
run: |
# Need this for the git tests to succeed.
@@ -58,30 +58,3 @@ jobs:
with:
with_coverage: ${{ inputs.with_coverage }}
python_version: '3.11'
# Check that spack can bootstrap the development environment on Python 3.6 - RHEL8
bootstrap-dev-rhel8:
runs-on: ubuntu-latest
container: registry.access.redhat.com/ubi8/ubi
steps:
- name: Install dependencies
run: |
dnf install -y \
bzip2 curl file gcc-c++ gcc gcc-gfortran git gnupg2 gzip \
make patch tcl unzip which xz
- uses: actions/checkout@3df4ab11eba7bda6032a0b82a6bb43b11571feac # @v2
- name: Setup repo and non-root user
run: |
git --version
git config --global --add safe.directory /__w/spack/spack
git fetch --unshallow
. .github/workflows/setup_git.sh
useradd spack-test
chown -R spack-test .
- name: Bootstrap Spack development environment
shell: runuser -u spack-test -- bash {0}
run: |
source share/spack/setup-env.sh
spack debug report
spack -d bootstrap now --dev
spack style -t black
spack unit-test -V

View File

@@ -15,15 +15,15 @@ jobs:
unit-tests:
runs-on: windows-latest
steps:
- uses: actions/checkout@3df4ab11eba7bda6032a0b82a6bb43b11571feac
- uses: actions/checkout@755da8c3cf115ac066823e79a1e1788f8940201b
with:
fetch-depth: 0
- uses: actions/setup-python@61a6322f88396a6271a6ee3565807d608ecaddd1
- uses: actions/setup-python@5ccb29d8773c3f3f653e1705f474dfaa8a06a912
with:
python-version: 3.9
- name: Install Python packages
run: |
python -m pip install --upgrade pip pywin32 setuptools pytest-cov clingo
python -m pip install --upgrade pip six pywin32 setuptools codecov pytest-cov clingo
- name: Create local develop
run: |
./.github/workflows/setup_git.ps1
@@ -33,21 +33,21 @@ jobs:
./share/spack/qa/validate_last_exit.ps1
coverage combine -a
coverage xml
- uses: codecov/codecov-action@eaaf4bedf32dbdc6b720b63067d99c4d77d6047d
- uses: codecov/codecov-action@d9f34f8cd5cb3b3eb79b3e4b5dae3a16df499a70
with:
flags: unittests,windows
unit-tests-cmd:
runs-on: windows-latest
steps:
- uses: actions/checkout@3df4ab11eba7bda6032a0b82a6bb43b11571feac
- uses: actions/checkout@755da8c3cf115ac066823e79a1e1788f8940201b
with:
fetch-depth: 0
- uses: actions/setup-python@61a6322f88396a6271a6ee3565807d608ecaddd1
- uses: actions/setup-python@5ccb29d8773c3f3f653e1705f474dfaa8a06a912
with:
python-version: 3.9
- name: Install Python packages
run: |
python -m pip install --upgrade pip pywin32 setuptools coverage pytest-cov clingo
python -m pip install --upgrade pip six pywin32 setuptools codecov coverage pytest-cov clingo
- name: Create local develop
run: |
./.github/workflows/setup_git.ps1
@@ -57,23 +57,99 @@ jobs:
./share/spack/qa/validate_last_exit.ps1
coverage combine -a
coverage xml
- uses: codecov/codecov-action@eaaf4bedf32dbdc6b720b63067d99c4d77d6047d
- uses: codecov/codecov-action@d9f34f8cd5cb3b3eb79b3e4b5dae3a16df499a70
with:
flags: unittests,windows
build-abseil:
runs-on: windows-latest
steps:
- uses: actions/checkout@3df4ab11eba7bda6032a0b82a6bb43b11571feac
- uses: actions/checkout@755da8c3cf115ac066823e79a1e1788f8940201b
with:
fetch-depth: 0
- uses: actions/setup-python@61a6322f88396a6271a6ee3565807d608ecaddd1
- uses: actions/setup-python@5ccb29d8773c3f3f653e1705f474dfaa8a06a912
with:
python-version: 3.9
- name: Install Python packages
run: |
python -m pip install --upgrade pip pywin32 setuptools coverage
python -m pip install --upgrade pip six pywin32 setuptools codecov coverage
- name: Build Test
run: |
spack compiler find
spack -d external find cmake ninja
spack external find cmake
spack external find ninja
spack -d install abseil-cpp
# TODO: johnwparent - reduce the size of the installer operations
# make-installer:
# runs-on: windows-latest
# steps:
# - name: Disable Windows Symlinks
# run: |
# git config --global core.symlinks false
# shell:
# powershell
# - uses: actions/checkout@755da8c3cf115ac066823e79a1e1788f8940201b
# with:
# fetch-depth: 0
# - uses: actions/setup-python@5ccb29d8773c3f3f653e1705f474dfaa8a06a912
# with:
# python-version: 3.9
# - name: Install Python packages
# run: |
# python -m pip install --upgrade pip six pywin32 setuptools
# - name: Add Light and Candle to Path
# run: |
# $env:WIX >> $GITHUB_PATH
# - name: Run Installer
# run: |
# ./share/spack/qa/setup_spack_installer.ps1
# spack make-installer -s . -g SILENT pkg
# echo "installer_root=$((pwd).Path)" | Out-File -FilePath $Env:GITHUB_ENV -Encoding utf8 -Append
# env:
# ProgressPreference: SilentlyContinue
# - uses: actions/upload-artifact@83fd05a356d7e2593de66fc9913b3002723633cb
# with:
# name: Windows Spack Installer Bundle
# path: ${{ env.installer_root }}\pkg\Spack.exe
# - uses: actions/upload-artifact@83fd05a356d7e2593de66fc9913b3002723633cb
# with:
# name: Windows Spack Installer
# path: ${{ env.installer_root}}\pkg\Spack.msi
# execute-installer:
# needs: make-installer
# runs-on: windows-latest
# defaults:
# run:
# shell: pwsh
# steps:
# - uses: actions/setup-python@5ccb29d8773c3f3f653e1705f474dfaa8a06a912
# with:
# python-version: 3.9
# - name: Install Python packages
# run: |
# python -m pip install --upgrade pip six pywin32 setuptools
# - name: Setup installer directory
# run: |
# mkdir -p spack_installer
# echo "spack_installer=$((pwd).Path)\spack_installer" | Out-File -FilePath $Env:GITHUB_ENV -Encoding utf8 -Append
# - uses: actions/download-artifact@v3
# with:
# name: Windows Spack Installer Bundle
# path: ${{ env.spack_installer }}
# - name: Execute Bundled Installer
# run: |
# $proc = Start-Process ${{ env.spack_installer }}\spack.exe "/install /quiet" -Passthru
# $handle = $proc.Handle # cache proc.Handle
# $proc.WaitForExit();
# $LASTEXITCODE
# env:
# ProgressPreference: SilentlyContinue
# - uses: actions/download-artifact@v3
# with:
# name: Windows Spack Installer
# path: ${{ env.spack_installer }}
# - name: Execute MSI
# run: |
# $proc = Start-Process ${{ env.spack_installer }}\spack.msi "/quiet" -Passthru
# $handle = $proc.Handle # cache proc.Handle
# $proc.WaitForExit();
# $LASTEXITCODE

View File

@@ -1,16 +1,10 @@
version: 2
build:
os: "ubuntu-22.04"
apt_packages:
- graphviz
tools:
python: "3.11"
sphinx:
configuration: lib/spack/docs/conf.py
fail_on_warning: true
python:
version: 3.7
install:
- requirements: lib/spack/docs/requirements.txt

View File

@@ -1,264 +1,3 @@
# v0.20.1 (2023-07-10)
## Spack Bugfixes
- Spec removed from an environment where not actually removed if `--force` was not given (#37877)
- Speed-up module file generation (#37739)
- Hotfix for a few recipes that treat CMake as a link dependency (#35816)
- Fix re-running stand-alone test a second time, which was getting a trailing spurious failure (#37840)
- Fixed reading JSON manifest on Cray, reporting non-concrete specs (#37909)
- Fixed a few bugs when generating Dockerfiles from Spack (#37766,#37769)
- Fixed a few long-standing bugs when generating module files (#36678,#38347,#38465,#38455)
- Fixed issues with building Python extensions using an external Python (#38186)
- Fixed compiler removal from command line (#38057)
- Show external status as [e] (#33792)
- Backported `archspec` fixes (#37793)
- Improved a few error messages (#37791)
# v0.20.0 (2023-05-21)
`v0.20.0` is a major feature release.
## Features in this release
1. **`requires()` directive and enhanced package requirements**
We've added some more enhancements to requirements in Spack (#36286).
There is a new `requires()` directive for packages. `requires()` is the opposite of
`conflicts()`. You can use it to impose constraints on this package when certain
conditions are met:
```python
requires(
"%apple-clang",
when="platform=darwin",
msg="This package builds only with clang on macOS"
)
```
More on this in [the docs](
https://spack.rtfd.io/en/latest/packaging_guide.html#conflicts-and-requirements).
You can also now add a `when:` clause to `requires:` in your `packages.yaml`
configuration or in an environment:
```yaml
packages:
openmpi:
require:
- any_of: ["%gcc"]
when: "@:4.1.4"
message: "Only OpenMPI 4.1.5 and up can build with fancy compilers"
```
More details can be found [here](
https://spack.readthedocs.io/en/latest/build_settings.html#package-requirements)
2. **Exact versions**
Spack did not previously have a way to distinguish a version if it was a prefix of
some other version. For example, `@3.2` would match `3.2`, `3.2.1`, `3.2.2`, etc. You
can now match *exactly* `3.2` with `@=3.2`. This is useful, for example, if you need
to patch *only* the `3.2` version of a package. The new syntax is described in [the docs](
https://spack.readthedocs.io/en/latest/basic_usage.html#version-specifier).
Generally, when writing packages, you should prefer to use ranges like `@3.2` over
the specific versions, as this allows the concretizer more leeway when selecting
versions of dependencies. More details and recommendations are in the [packaging guide](
https://spack.readthedocs.io/en/latest/packaging_guide.html#ranges-versus-specific-versions).
See #36273 for full details on the version refactor.
3. **New testing interface**
Writing package tests is now much simpler with a new [test interface](
https://spack.readthedocs.io/en/latest/packaging_guide.html#stand-alone-tests).
Writing a test is now as easy as adding a method that starts with `test_`:
```python
class MyPackage(Package):
...
def test_always_fails(self):
"""use assert to always fail"""
assert False
def test_example(self):
"""run installed example"""
example = which(self.prefix.bin.example)
example()
```
You can use Python's native `assert` statement to implement your checks -- no more
need to fiddle with `run_test` or other test framework methods. Spack will
introspect the class and run `test_*` methods when you run `spack test`,
4. **More stable concretization**
* Now, `spack concretize` will *only* concretize the new portions of the environment
and will not change existing parts of an environment unless you specify `--force`.
This has always been true for `unify:false`, but not for `unify:true` and
`unify:when_possible` environments. Now it is true for all of them (#37438, #37681).
* The concretizer has a new `--reuse-deps` argument that *only* reuses dependencies.
That is, it will always treat the *roots* of your environment as it would with
`--fresh`. This allows you to upgrade just the roots of your environment while
keeping everything else stable (#30990).
5. **Weekly develop snapshot releases**
Since last year, we have maintained a buildcache of `develop` at
https://binaries.spack.io/develop, but the cache can grow to contain so many builds
as to be unwieldy. When we get a stable `develop` build, we snapshot the release and
add a corresponding tag the Spack repository. So, you can use a stack from a specific
day. There are now tags in the spack repository like:
* `develop-2023-05-14`
* `develop-2023-05-18`
that correspond to build caches like:
* https://binaries.spack.io/develop-2023-05-14/e4s
* https://binaries.spack.io/develop-2023-05-18/e4s
We plan to store these snapshot releases weekly.
6. **Specs in buildcaches can be referenced by hash.**
* Previously, you could run `spack buildcache list` and see the hashes in
buildcaches, but referring to them by hash would fail.
* You can now run commands like `spack spec` and `spack install` and refer to
buildcache hashes directly, e.g. `spack install /abc123` (#35042)
7. **New package and buildcache index websites**
Our public websites for searching packages have been completely revamped and updated.
You can check them out here:
* *Package Index*: https://packages.spack.io
* *Buildcache Index*: https://cache.spack.io
Both are searchable and more interactive than before. Currently major releases are
shown; UI for browsing `develop` snapshots is coming soon.
8. **Default CMake and Meson build types are now Release**
Spack has historically defaulted to building with optimization and debugging, but
packages like `llvm` can be enormous with debug turned on. Our default build type for
all Spack packages is now `Release` (#36679, #37436). This has a number of benefits:
* much smaller binaries;
* higher default optimization level; and
* defining `NDEBUG` disables assertions, which may lead to further speedups.
You can still get the old behavior back through requirements and package preferences.
## Other new commands and directives
* `spack checksum` can automatically add new versions to package (#24532)
* new command: `spack pkg grep` to easily search package files (#34388)
* New `maintainers` directive (#35083)
* Add `spack buildcache push` (alias to `buildcache create`) (#34861)
* Allow using `-j` to control the parallelism of concretization (#37608)
* Add `--exclude` option to 'spack external find' (#35013)
## Other new features of note
* editing: add higher-precedence `SPACK_EDITOR` environment variable
* Many YAML formatting improvements from updating `ruamel.yaml` to the latest version
supporting Python 3.6. (#31091, #24885, #37008).
* Requirements and preferences should not define (non-git) versions (#37687, #37747)
* Environments now store spack version/commit in `spack.lock` (#32801)
* User can specify the name of the `packages` subdirectory in repositories (#36643)
* Add container images supporting RHEL alternatives (#36713)
* make version(...) kwargs explicit (#36998)
## Notable refactors
* buildcache create: reproducible tarballs (#35623)
* Bootstrap most of Spack dependencies using environments (#34029)
* Split `satisfies(..., strict=True/False)` into two functions (#35681)
* spack install: simplify behavior when inside environments (#35206)
## Binary cache and stack updates
* Major simplification of CI boilerplate in stacks (#34272, #36045)
* Many improvements to our CI pipeline's reliability
## Removals, Deprecations, and disablements
* Module file generation is disabled by default; you'll need to enable it to use it (#37258)
* Support for Python 2 was deprecated in `v0.19.0` and has been removed. `v0.20.0` only
supports Python 3.6 and higher.
* Deprecated target names are no longer recognized by Spack. Use generic names instead:
* `graviton` is now `cortex_a72`
* `graviton2` is now `neoverse_n1`
* `graviton3` is now `neoverse_v1`
* `blacklist` and `whitelist` in module configuration were deprecated in `v0.19.0` and are
removed in this release. Use `exclude` and `include` instead.
* The `ignore=` parameter of the `extends()` directive has been removed. It was not used by
any builtin packages and is no longer needed to avoid conflicts in environment views (#35588).
* Support for the old YAML buildcache format has been removed. It was deprecated in `v0.19.0` (#34347).
* `spack find --bootstrap` has been removed. It was deprecated in `v0.19.0`. Use `spack
--bootstrap find` instead (#33964).
* `spack bootstrap trust` and `spack bootstrap untrust` are now removed, having been
deprecated in `v0.19.0`. Use `spack bootstrap enable` and `spack bootstrap disable`.
* The `--mirror-name`, `--mirror-url`, and `--directory` options to buildcache and
mirror commands were deprecated in `v0.19.0` and have now been removed. They have been
replaced by positional arguments (#37457).
* Deprecate `env:` as top level environment key (#37424)
* deprecate buildcache create --rel, buildcache install --allow-root (#37285)
* Support for very old perl-like spec format strings (e.g., `$_$@$%@+$+$=`) has been
removed (#37425). This was deprecated in in `v0.15` (#10556).
## Notable Bugfixes
* bugfix: don't fetch package metadata for unknown concrete specs (#36990)
* Improve package source code context display on error (#37655)
* Relax environment manifest filename requirements and lockfile identification criteria (#37413)
* `installer.py`: drop build edges of installed packages by default (#36707)
* Bugfix: package requirements with git commits (#35057, #36347)
* Package requirements: allow single specs in requirement lists (#36258)
* conditional variant values: allow boolean (#33939)
* spack uninstall: follow run/link edges on --dependents (#34058)
## Spack community stats
* 7,179 total packages, 499 new since `v0.19.0`
* 329 new Python packages
* 31 new R packages
* 336 people contributed to this release
* 317 committers to packages
* 62 committers to core
# v0.19.1 (2023-02-07)
### Spack Bugfixes
* `buildcache create`: make "file exists" less verbose (#35019)
* `spack mirror create`: don't change paths to urls (#34992)
* Improve error message for requirements (#33988)
* uninstall: fix accidental cubic complexity (#34005)
* scons: fix signature for `install_args` (#34481)
* Fix `combine_phase_logs` text encoding issues (#34657)
* Use a module-like object to propagate changes in the MRO, when setting build env (#34059)
* PackageBase should not define builder legacy attributes (#33942)
* Forward lookup of the "run_tests" attribute (#34531)
* Bugfix for timers (#33917, #33900)
* Fix path handling in prefix inspections (#35318)
* Fix libtool filter for Fujitsu compilers (#34916)
* Bug fix for duplicate rpath errors on macOS when creating build caches (#34375)
* FileCache: delete the new cache file on exception (#34623)
* Propagate exceptions from Spack python console (#34547)
* Tests: Fix a bug/typo in a `config_values.py` fixture (#33886)
* Various CI fixes (#33953, #34560, #34560, #34828)
* Docs: remove monitors and analyzers, typos (#34358, #33926)
* bump release version for tutorial command (#33859)
# v0.19.0 (2022-11-11)
`v0.19.0` is a major feature release.

View File

@@ -1,6 +1,6 @@
MIT License
Copyright (c) 2013-2023 LLNS, LLC and other Spack Project Developers.
Copyright (c) 2013-2022 LLNS, LLC and other Spack Project Developers.
Permission is hereby granted, free of charge, to any person obtaining a copy
of this software and associated documentation files (the "Software"), to deal

View File

@@ -2,26 +2,24 @@
## Supported Versions
We provide security updates for `develop` and for the last two
stable (`0.x`) release series of Spack. Security updates will be
made available as patch (`0.x.1`, `0.x.2`, etc.) releases.
We provide security updates for the following releases.
For more on Spack's release structure, see
[`README.md`](https://github.com/spack/spack#releases).
| Version | Supported |
| ------- | ------------------ |
| develop | :white_check_mark: |
| 0.19.x | :white_check_mark: |
| 0.18.x | :white_check_mark: |
## Reporting a Vulnerability
You can report a vulnerability using GitHub's private reporting
feature:
To report a vulnerability or other security
issue, email maintainers@spack.io.
1. Go to [github.com/spack/spack/security](https://github.com/spack/spack/security).
2. Click "Report a vulnerability" in the upper right corner of that page.
3. Fill out the form and submit your draft security advisory.
More details are available in
[GitHub's docs](https://docs.github.com/en/code-security/security-advisories/guidance-on-reporting-and-writing/privately-reporting-a-security-vulnerability).
You can expect to hear back about security issues within two days.
If your security issue is accepted, we will do our best to release
a fix within a week. If fixing the issue will take longer than
this, we will discuss timeline options with you.
You can expect to hear back within two days.
If your security issue is accepted, we will do
our best to release a fix within a week. If
fixing the issue will take longer than this,
we will discuss timeline options with you.

View File

@@ -1,4 +1,4 @@
# Copyright 2013-2023 Lawrence Livermore National Security, LLC and other
# Copyright 2013-2021 Lawrence Livermore National Security, LLC and other
# Spack Project Developers. See the top-level COPYRIGHT file for details.
#
# SPDX-License-Identifier: (Apache-2.0 OR MIT)
@@ -10,7 +10,6 @@ def getpywin():
try:
import win32con # noqa: F401
except ImportError:
print("pyWin32 not installed but is required...\nInstalling via pip:")
subprocess.check_call([sys.executable, "-m", "pip", "-q", "install", "--upgrade", "pip"])
subprocess.check_call([sys.executable, "-m", "pip", "-q", "install", "pywin32"])

View File

@@ -1,6 +1,6 @@
#!/bin/sh
#
# Copyright 2013-2023 Lawrence Livermore National Security, LLC and other
# Copyright 2013-2021 Lawrence Livermore National Security, LLC and other
# sbang project developers. See the top-level COPYRIGHT file for details.
#
# SPDX-License-Identifier: (Apache-2.0 OR MIT)

View File

@@ -1,7 +1,7 @@
#!/bin/sh
# -*- python -*-
#
# Copyright 2013-2023 Lawrence Livermore National Security, LLC and other
# Copyright 2013-2022 Lawrence Livermore National Security, LLC and other
# Spack Project Developers. See the top-level COPYRIGHT file for details.
#
# SPDX-License-Identifier: (Apache-2.0 OR MIT)
@@ -25,6 +25,8 @@ exit 1
# Line above is a shell no-op, and ends a python multi-line comment.
# The code above runs this file with our preferred python interpreter.
from __future__ import print_function
import os
import os.path
import sys

View File

@@ -1,6 +1,6 @@
#!/bin/sh
#
# Copyright 2013-2023 Lawrence Livermore National Security, LLC and other
# Copyright 2013-2022 Lawrence Livermore National Security, LLC and other
# Spack Project Developers. See the top-level COPYRIGHT file for details.
#
# SPDX-License-Identifier: (Apache-2.0 OR MIT)

View File

@@ -72,7 +72,6 @@ config:
root: $TMP_DIR/install
misc_cache: $$user_cache_path/cache
source_cache: $$user_cache_path/source
environments_root: $TMP_DIR/envs
EOF
cat >"$SPACK_USER_CONFIG_PATH/bootstrap.yaml" <<EOF
bootstrap:

View File

@@ -1,4 +1,4 @@
:: Copyright 2013-2023 Lawrence Livermore National Security, LLC and other
:: Copyright 2013-2021 Lawrence Livermore National Security, LLC and other
:: Spack Project Developers. See the top-level COPYRIGHT file for details.
::
:: SPDX-License-Identifier: (Apache-2.0 OR MIT)
@@ -14,7 +14,7 @@
::
@echo off
set spack="%SPACK_ROOT%"\bin\spack
set spack=%SPACK_ROOT%\bin\spack
::#######################################################################
:: This is a wrapper around the spack command that forwards calls to
@@ -50,48 +50,25 @@ setlocal enabledelayedexpansion
:: flags will always start with '-', e.g. --help or -V
:: subcommands will never start with '-'
:: everything after the subcommand is an arg
:process_cl_args
rem Set first cl argument (denoted by %1) to be processed
set t=%1
rem shift moves all cl positional arguments left by one
rem meaning %2 is now %1, this allows us to iterate over each
rem argument
shift
rem assign next "first" cl argument to cl_args, will be null when
rem there are now further arguments to process
set cl_args=%1
if "!t:~0,1!" == "-" (
if defined _sp_subcommand (
rem We already have a subcommand, processing args now
if not defined _sp_args (
set "_sp_args=!t!"
) else (
for %%x in (%*) do (
set t="%%~x"
if "!t:~0,1!" == "-" (
if defined _sp_subcommand (
:: We already have a subcommand, processing args now
set "_sp_args=!_sp_args! !t!"
)
) else (
if not defined _sp_flags (
set "_sp_flags=!t!"
) else (
set "_sp_flags=!_sp_flags! !t!"
shift
)
)
) else if not defined _sp_subcommand (
set "_sp_subcommand=!t!"
) else (
if not defined _sp_args (
set "_sp_args=!t!"
) else if not defined _sp_subcommand (
set "_sp_subcommand=!t!"
shift
) else (
set "_sp_args=!_sp_args! !t!"
shift
)
)
rem if this is not nu;ll, we have more tokens to process
rem start above process again with remaining unprocessed cl args
if defined cl_args goto :process_cl_args
:: --help, -h and -V flags don't require further output parsing.
:: If we encounter, execute and exit
if defined _sp_flags (
@@ -106,24 +83,24 @@ if defined _sp_flags (
exit /B 0
)
)
if not defined _sp_subcommand (
if not defined _sp_args (
if not defined _sp_flags (
python "%spack%" --help
exit /B 0
)
)
)
:: pass parsed variables outside of local scope. Need to do
:: this because delayedexpansion can only be set by setlocal
endlocal & (
set "_sp_flags=%_sp_flags%"
set "_sp_args=%_sp_args%"
set "_sp_subcommand=%_sp_subcommand%"
)
echo %_sp_flags%>flags
echo %_sp_args%>args
echo %_sp_subcommand%>subcmd
endlocal
set /p _sp_subcommand=<subcmd
set /p _sp_flags=<flags
set /p _sp_args=<args
set str_subcommand=%_sp_subcommand:"='%
set str_flags=%_sp_flags:"='%
set str_args=%_sp_args:"='%
if "%str_subcommand%"=="ECHO is off." (set "_sp_subcommand=")
if "%str_flags%"=="ECHO is off." (set "_sp_flags=")
if "%str_args%"=="ECHO is off." (set "_sp_args=")
del subcmd
del flags
del args
:: Filter out some commands. For any others, just run the command.
if "%_sp_subcommand%" == "cd" (
@@ -166,9 +143,7 @@ goto :end_switch
:: If no args or args contain --bat or -h/--help: just execute.
if NOT defined _sp_args (
goto :default_case
)
if NOT "%_sp_args%"=="%_sp_args:--help=%" (
)else if NOT "%_sp_args%"=="%_sp_args:--help=%" (
goto :default_case
) else if NOT "%_sp_args%"=="%_sp_args: -h=%" (
goto :default_case
@@ -176,11 +151,11 @@ if NOT "%_sp_args%"=="%_sp_args:--help=%" (
goto :default_case
) else if NOT "%_sp_args%"=="%_sp_args:deactivate=%" (
for /f "tokens=* USEBACKQ" %%I in (
`call python %spack% %_sp_flags% env deactivate --bat %_sp_args:deactivate=%`
`call python "%spack%" %_sp_flags% env deactivate --bat %_sp_args:deactivate=%`
) do %%I
) else if NOT "%_sp_args%"=="%_sp_args:activate=%" (
for /f "tokens=* USEBACKQ" %%I in (
`python %spack% %_sp_flags% env activate --bat %_sp_args:activate=%`
`call python "%spack%" %_sp_flags% env activate --bat %_sp_args:activate=%`
) do %%I
) else (
goto :default_case
@@ -192,7 +167,7 @@ goto :end_switch
if defined _sp_args (
if NOT "%_sp_args%"=="%_sp_args:--help=%" (
goto :default_case
) else if NOT "%_sp_args%"=="%_sp_args:-h=%" (
) else if NOT "%_sp_args%"=="%_sp_args: -h=%" (
goto :default_case
) else if NOT "%_sp_args%"=="%_sp_args:--bat=%" (
goto :default_case
@@ -201,7 +176,7 @@ if defined _sp_args (
for /f "tokens=* USEBACKQ" %%I in (
`python "%spack%" %_sp_flags% %_sp_subcommand% --bat %_sp_args%`) do %%I
)
goto :end_switch
:case_unload
@@ -239,10 +214,10 @@ for %%Z in ("%_pa_new_path%") do if EXIST %%~sZ\NUL (
exit /b 0
:: set module system roots
:_sp_multi_pathadd
:_sp_multi_pathadd
for %%I in (%~2) do (
for %%Z in (%_sp_compatible_sys_types%) do (
:pathadd "%~1" "%%I\%%Z"
)
)
exit /B %ERRORLEVEL%
exit /B %ERRORLEVEL%

View File

@@ -1,146 +0,0 @@
# Copyright 2013-2023 Lawrence Livermore National Security, LLC and other
# Spack Project Developers. See the top-level COPYRIGHT file for details.
# SPDX-License-Identifier: (Apache-2.0 OR MIT)
# #######################################################################
function Compare-CommonArgs {
$CMDArgs = $args[0]
# These aruments take precedence and call for no futher parsing of arguments
# invoke actual Spack entrypoint with that context and exit after
"--help", "-h", "--version", "-V" | ForEach-Object {
$arg_opt = $_
if(($CMDArgs) -and ([bool]($CMDArgs.Where({$_ -eq $arg_opt})))) {
return $true
}
}
return $false
}
function Read-SpackArgs {
$SpackCMD_params = @()
$SpackSubCommand = $NULL
$SpackSubCommandArgs = @()
$args_ = $args[0]
$args_ | ForEach-Object {
if (!$SpackSubCommand) {
if($_.SubString(0,1) -eq "-")
{
$SpackCMD_params += $_
}
else{
$SpackSubCommand = $_
}
}
else{
$SpackSubCommandArgs += $_
}
}
return $SpackCMD_params, $SpackSubCommand, $SpackSubCommandArgs
}
function Set-SpackEnv {
# This method is responsible
# for processing the return from $(spack <command>)
# which are returned as System.Object[]'s containing
# a list of env commands
# Invoke-Expression can only handle one command at a time
# so we iterate over the list to invoke the env modification
# expressions one at a time
foreach($envop in $args[0]){
Invoke-Expression $envop
}
}
function Invoke-SpackCD {
if (Compare-CommonArgs $SpackSubCommandArgs) {
python "$Env:SPACK_ROOT/bin/spack" cd -h
}
else {
$LOC = $(python "$Env:SPACK_ROOT/bin/spack" location $SpackSubCommandArgs)
if (($NULL -ne $LOC)){
if ( Test-Path -Path $LOC){
Set-Location $LOC
}
else{
exit 1
}
}
else {
exit 1
}
}
}
function Invoke-SpackEnv {
if (Compare-CommonArgs $SpackSubCommandArgs[0]) {
python "$Env:SPACK_ROOT/bin/spack" env -h
}
else {
$SubCommandSubCommand = $SpackSubCommandArgs[0]
$SubCommandSubCommandArgs = $SpackSubCommandArgs[1..$SpackSubCommandArgs.Count]
switch ($SubCommandSubCommand) {
"activate" {
if (Compare-CommonArgs $SubCommandSubCommandArgs) {
python "$Env:SPACK_ROOT/bin/spack" env activate $SubCommandSubCommandArgs
}
elseif ([bool]($SubCommandSubCommandArgs.Where({$_ -eq "--pwsh"}))) {
python "$Env:SPACK_ROOT/bin/spack" env activate $SubCommandSubCommandArgs
}
elseif (!$SubCommandSubCommandArgs) {
python "$Env:SPACK_ROOT/bin/spack" env activate $SubCommandSubCommandArgs
}
else {
$SpackEnv = $(python "$Env:SPACK_ROOT/bin/spack" $SpackCMD_params env activate "--pwsh" $SubCommandSubCommandArgs)
Set-SpackEnv $SpackEnv
}
}
"deactivate" {
if ([bool]($SubCommandSubCommandArgs.Where({$_ -eq "--pwsh"}))) {
python"$Env:SPACK_ROOT/bin/spack" env deactivate $SubCommandSubCommandArgs
}
elseif($SubCommandSubCommandArgs) {
python "$Env:SPACK_ROOT/bin/spack" env deactivate -h
}
else {
$SpackEnv = $(python "$Env:SPACK_ROOT/bin/spack" $SpackCMD_params env deactivate "--pwsh")
Set-SpackEnv $SpackEnv
}
}
default {python "$Env:SPACK_ROOT/bin/spack" $SpackCMD_params $SpackSubCommand $SpackSubCommandArgs}
}
}
}
function Invoke-SpackLoad {
if (Compare-CommonArgs $SpackSubCommandArgs) {
python "$Env:SPACK_ROOT/bin/spack" $SpackCMD_params $SpackSubCommand $SpackSubCommandArgs
}
elseif ([bool]($SpackSubCommandArgs.Where({($_ -eq "--pwsh") -or ($_ -eq "--list")}))) {
python "$Env:SPACK_ROOT/bin/spack" $SpackCMD_params $SpackSubCommand $SpackSubCommandArgs
}
else {
$SpackEnv = $(python "$Env:SPACK_ROOT/bin/spack" $SpackCMD_params $SpackSubCommand "--pwsh" $SpackSubCommandArgs)
Set-SpackEnv $SpackEnv
}
}
$SpackCMD_params, $SpackSubCommand, $SpackSubCommandArgs = Read-SpackArgs $args
if (Compare-CommonArgs $SpackCMD_params) {
python "$Env:SPACK_ROOT/bin/spack" $SpackCMD_params $SpackSubCommand $SpackSubCommandArgs
exit $LASTEXITCODE
}
# Process Spack commands with special conditions
# all other commands are piped directly to Spack
switch($SpackSubCommand)
{
"cd" {Invoke-SpackCD}
"env" {Invoke-SpackEnv}
"load" {Invoke-SpackLoad}
"unload" {Invoke-SpackLoad}
default {python "$Env:SPACK_ROOT/bin/spack" $SpackCMD_params $SpackSubCommand $SpackSubCommandArgs}
}

View File

@@ -52,6 +52,7 @@ if defined py_path (
if defined py_exe (
"%py_exe%" "%SPACK_ROOT%\bin\haspywin.py"
"%py_exe%" "%SPACK_ROOT%\bin\spack" external find python >NUL
)
set "EDITOR=notepad"

View File

@@ -1,4 +1,4 @@
# Copyright 2013-2023 Lawrence Livermore National Security, LLC and other
# Copyright 2013-2022 Lawrence Livermore National Security, LLC and other
# Spack Project Developers. See the top-level COPYRIGHT file for details.
#
# SPDX-License-Identifier: (Apache-2.0 OR MIT)

View File

@@ -13,18 +13,16 @@ concretizer:
# Whether to consider installed packages or packages from buildcaches when
# concretizing specs. If `true`, we'll try to use as many installs/binaries
# as possible, rather than building. If `false`, we'll always give you a fresh
# concretization. If `dependencies`, we'll only reuse dependencies but
# give you a fresh concretization for your root specs.
reuse: dependencies
# concretization.
reuse: true
# Options that tune which targets are considered for concretization. The
# concretization process is very sensitive to the number targets, and the time
# needed to reach a solution increases noticeably with the number of targets
# considered.
targets:
# Determine whether we want to target specific or generic
# microarchitectures. Valid values are: "microarchitectures" or "generic".
# An example of "microarchitectures" would be "skylake" or "bulldozer",
# while an example of "generic" would be "aarch64" or "x86_64_v4".
# Determine whether we want to target specific or generic microarchitectures.
# An example of the first kind might be for instance "skylake" or "bulldozer",
# while generic microarchitectures are for instance "aarch64" or "x86_64_v4".
granularity: microarchitectures
# If "false" allow targets that are incompatible with the current host (for
# instance concretize with target "icelake" while running on "haswell").
@@ -35,10 +33,4 @@ concretizer:
# environments can always be activated. When "false" perform concretization separately
# on each root spec, allowing different versions and variants of the same package in
# an environment.
unify: true
# Option to deal with possible duplicate nodes (i.e. different nodes from the same package) in the DAG.
duplicates:
# "none": allows a single node for any package in the DAG.
# "minimal": allows the duplication of 'build-tools' nodes only (e.g. py-setuptools, cmake etc.)
# "full" (experimental): allows separation of the entire build-tool stack (e.g. the entire "cmake" subDAG)
strategy: none
unify: true

View File

@@ -54,11 +54,6 @@ config:
# are that it precludes its use as a system package and its ability to be
# pip installable.
#
# In Spack environment files, chaining onto existing system Spack
# installations, the $env variable can be used to download, cache and build
# into user-writable paths that are relative to the currently active
# environment.
#
# In any case, if the username is not already in the path, Spack will append
# the value of `$user` in an attempt to avoid potential conflicts between
# users in shared temporary spaces.
@@ -81,10 +76,6 @@ config:
source_cache: $spack/var/spack/cache
## Directory where spack managed environments are created and stored
# environments_root: $spack/var/spack/environments
# Cache directory for miscellaneous files, like the package index.
# This can be purged with `spack clean --misc-cache`
misc_cache: $user_cache_path/cache
@@ -185,7 +176,7 @@ config:
# when Spack needs to manage its own package metadata and all operations are
# expected to complete within the default time limit. The timeout should
# therefore generally be left untouched.
db_lock_timeout: 60
db_lock_timeout: 3
# How long to wait when attempting to modify a package (e.g. to install it).
@@ -216,11 +207,10 @@ config:
# manipulation by unprivileged user (e.g. AFS)
allow_sgid: true
# Whether to show status information during building and installing packages.
# This gives information about Spack's current progress as well as the current
# and total number of packages. Information is shown both in the terminal
# title and inline.
install_status: true
# Whether to set the terminal title to display status information during
# building and installing packages. This gives information about Spack's
# current progress as well as the current and total number of packages.
terminal_title: false
# Number of seconds a buildcache's index.json is cached locally before probing
# for updates, within a single Spack invocation. Defaults to 10 minutes.

View File

@@ -23,20 +23,8 @@ packages:
providers:
elf: [libelf]
fuse: [macfuse]
gl: [apple-gl]
glu: [apple-glu]
unwind: [apple-libunwind]
uuid: [apple-libuuid]
apple-gl:
buildable: false
externals:
- spec: apple-gl@4.1.0
prefix: /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk
apple-glu:
buildable: false
externals:
- spec: apple-glu@1.3.0
prefix: /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk
apple-libunwind:
buildable: false
externals:

View File

@@ -1,4 +1,2 @@
mirrors:
spack-public:
binary: false
url: https://mirror.spack.io
spack-public: https://mirror.spack.io

View File

@@ -40,12 +40,13 @@ modules:
roots:
tcl: $spack/share/spack/modules
lmod: $spack/share/spack/lmod
# What type of modules to use ("tcl" and/or "lmod")
enable: []
# What type of modules to use
enable:
- tcl
tcl:
all:
autoload: direct
autoload: none
# Default configurations if lmod is enabled
lmod:

View File

@@ -20,7 +20,7 @@ packages:
awk: [gawk]
blas: [openblas, amdblis]
D: [ldc]
daal: [intel-oneapi-daal]
daal: [intel-daal]
elf: [elfutils]
fftw-api: [fftw, amdfftw]
flame: [libflame, amdlibflame]
@@ -28,9 +28,9 @@ packages:
gl: [glx, osmesa]
glu: [mesa-glu, openglu]
golang: [go, gcc]
go-or-gccgo-bootstrap: [go-bootstrap, gcc]
go-external-or-gccgo-bootstrap: [go-bootstrap, gcc]
iconv: [libiconv]
ipp: [intel-oneapi-ipp]
ipp: [intel-ipp]
java: [openjdk, jdk, ibm-java]
jpeg: [libjpeg-turbo, libjpeg]
lapack: [openblas, amdlibflame]
@@ -40,7 +40,7 @@ packages:
lua-lang: [lua, lua-luajit-openresty, lua-luajit]
luajit: [lua-luajit-openresty, lua-luajit]
mariadb-client: [mariadb-c-client, mariadb]
mkl: [intel-oneapi-mkl]
mkl: [intel-mkl]
mpe: [mpe2]
mpi: [openmpi, mpich]
mysql-client: [mysql, mariadb-c-client]
@@ -49,7 +49,6 @@ packages:
pbs: [openpbs, torque]
pil: [py-pillow]
pkgconfig: [pkgconf, pkg-config]
qmake: [qt-base, qt]
rpc: [libtirpc]
scalapack: [netlib-scalapack, amdscalapack]
sycl: [hipsycl]
@@ -60,7 +59,6 @@ packages:
xxd: [xxd-standalone, vim]
yacc: [bison, byacc]
ziglang: [zig]
zlib-api: [zlib-ng+compat, zlib]
permissions:
read: world
write: user

View File

@@ -3,4 +3,3 @@ config:
concretizer: clingo
build_stage::
- '$spack/.staging'
stage_name: '{name}-{version}-{hash:7}'

View File

@@ -1,22 +0,0 @@
# -------------------------------------------------------------------------
# This file controls default concretization preferences for Spack.
#
# Settings here are versioned with Spack and are intended to provide
# sensible defaults out of the box. Spack maintainers should edit this
# file to keep it current.
#
# Users can override these settings by editing the following files.
#
# Per-spack-instance settings (overrides defaults):
# $SPACK_ROOT/etc/spack/packages.yaml
#
# Per-user settings (overrides default and site settings):
# ~/.spack/packages.yaml
# -------------------------------------------------------------------------
packages:
all:
compiler:
- msvc
providers:
mpi: [msmpi]
gl: [wgl]

View File

@@ -5,4 +5,3 @@ llnl*.rst
_build
.spack-env
spack.lock
_spack_root

View File

@@ -1,16 +0,0 @@
# Copyright 2013-2023 Lawrence Livermore National Security, LLC and other
# Spack Project Developers. See the top-level COPYRIGHT file for details.
#
# SPDX-License-Identifier: (Apache-2.0 OR MIT)
# The name of the Pygments (syntax highlighting) style to use.
# We use our own extension of the default style with a few modifications
from pygments.styles.default import DefaultStyle
from pygments.token import Generic
class SpackStyle(DefaultStyle):
styles = DefaultStyle.styles.copy()
background_color = "#f4f4f8"
styles[Generic.Output] = "#355"
styles[Generic.Prompt] = "bold #346ec9"

View File

@@ -1,4 +1,4 @@
.. Copyright 2013-2023 Lawrence Livermore National Security, LLC and other
.. Copyright 2013-2022 Lawrence Livermore National Security, LLC and other
Spack Project Developers. See the top-level COPYRIGHT file for details.
SPDX-License-Identifier: (Apache-2.0 OR MIT)
@@ -942,7 +942,7 @@ first ``libelf`` above, you would run:
$ spack load /qmm4kso
To see which packages that you have loaded to your environment you would
To see which packages that you have loaded to your enviornment you would
use ``spack find --loaded``.
.. code-block:: console
@@ -1103,31 +1103,16 @@ Below are more details about the specifiers that you can add to specs.
Version specifier
^^^^^^^^^^^^^^^^^
A version specifier ``pkg@<specifier>`` comes after a package name
and starts with ``@``. It can be something abstract that matches
multiple known versions, or a specific version. During concretization,
Spack will pick the optimal version within the spec's constraints
according to policies set for the particular Spack installation.
The version specifier can be *a specific version*, such as ``@=1.0.0`` or
``@=1.2a7``. Or, it can be *a range of versions*, such as ``@1.0:1.5``.
Version ranges are inclusive, so this example includes both ``1.0``
and any ``1.5.x`` version. Version ranges can be unbounded, e.g. ``@:3``
means any version up to and including ``3``. This would include ``3.4``
and ``3.4.2``. Similarly, ``@4.2:`` means any version above and including
``4.2``. As a short-hand, ``@3`` is equivalent to the range ``@3:3`` and
includes any version with major version ``3``.
Notice that you can distinguish between the specific version ``@=3.2`` and
the range ``@3.2``. This is useful for packages that follow a versioning
scheme that omits the zero patch version number: ``3.2``, ``3.2.1``,
``3.2.2``, etc. In general it is preferable to use the range syntax
``@3.2``, since ranges also match versions with one-off suffixes, such as
``3.2-custom``.
A version specifier can also be a list of ranges and specific versions,
separated by commas. For example, ``@1.0:1.5,=1.7.1`` matches any version
in the range ``1.0:1.5`` and the specific version ``1.7.1``.
A version specifier comes somewhere after a package name and starts
with ``@``. It can be a single version, e.g. ``@1.0``, ``@3``, or
``@1.2a7``. Or, it can be a range of versions, such as ``@1.0:1.5``
(all versions between ``1.0`` and ``1.5``, inclusive). Version ranges
can be open, e.g. ``:3`` means any version up to and including ``3``.
This would include ``3.4`` and ``3.4.2``. ``4.2:`` means any version
above and including ``4.2``. Finally, a version specifier can be a
set of arbitrary versions, such as ``@1.0,1.5,1.7`` (``1.0``, ``1.5``,
or ``1.7``). When you supply such a specifier to ``spack install``,
it constrains the set of versions that Spack will install.
For packages with a ``git`` attribute, ``git`` references
may be specified instead of a numerical version i.e. branches, tags
@@ -1136,35 +1121,36 @@ reference provided. Acceptable syntaxes for this are:
.. code-block:: sh
# commit hashes
foo@abcdef1234abcdef1234abcdef1234abcdef1234 # 40 character hashes are automatically treated as git commits
foo@git.abcdef1234abcdef1234abcdef1234abcdef1234
# branches and tags
foo@git.develop # use the develop branch
foo@git.0.19 # use the 0.19 tag
Spack always needs to associate a Spack version with the git reference,
which is used for version comparison. This Spack version is heuristically
taken from the closest valid git tag among ancestors of the git ref.
# commit hashes
foo@abcdef1234abcdef1234abcdef1234abcdef1234 # 40 character hashes are automatically treated as git commits
foo@git.abcdef1234abcdef1234abcdef1234abcdef1234
Once a Spack version is associated with a git ref, it always printed with
the git ref. For example, if the commit ``@git.abcdefg`` is tagged
``0.19``, then the spec will be shown as ``@git.abcdefg=0.19``.
Spack versions from git reference either have an associated version supplied by the user,
or infer a relationship to known versions from the structure of the git repository. If an
associated version is supplied by the user, Spack treats the git version as equivalent to that
version for all version comparisons in the package logic (e.g. ``depends_on('foo', when='@1.5')``).
If the git ref is not exactly a tag, then the distance to the nearest tag
is also part of the resolved version. ``@git.abcdefg=0.19.git.8`` means
that the commit is 8 commits away from the ``0.19`` tag.
In cases where Spack cannot resolve a sensible version from a git ref,
users can specify the Spack version to use for the git ref. This is done
by appending ``=`` and the Spack version to the git ref. For example:
The associated version can be assigned with ``[git ref]=[version]`` syntax, with the caveat that the specified version is known to Spack from either the package definition, or in the configuration preferences (i.e. ``packages.yaml``).
.. code-block:: sh
foo@git.my_ref=3.2 # use the my_ref tag or branch, but treat it as version 3.2 for version comparisons
foo@git.abcdef1234abcdef1234abcdef1234abcdef1234=develop # use the given commit, but treat it as develop for version comparisons
If an associated version is not supplied then the tags in the git repo are used to determine
the most recent previous version known to Spack. Details about how versions are compared
and how Spack determines if one version is less than another are discussed in the developer guide.
If the version spec is not provided, then Spack will choose one
according to policies set for the particular spack installation. If
the spec is ambiguous, i.e. it could match multiple versions, Spack
will choose a version within the spec's constraints according to
policies set for the particular Spack installation.
Details about how versions are compared and how Spack determines if
one version is less than another are discussed in the developer guide.

View File

@@ -1,4 +1,4 @@
.. Copyright 2013-2023 Lawrence Livermore National Security, LLC and other
.. Copyright 2013-2022 Lawrence Livermore National Security, LLC and other
Spack Project Developers. See the top-level COPYRIGHT file for details.
SPDX-License-Identifier: (Apache-2.0 OR MIT)
@@ -13,47 +13,49 @@ Some sites may encourage users to set up their own test environments
before carrying out central installations, or some users may prefer to set
up these environments on their own motivation. To reduce the load of
recompiling otherwise identical package specs in different installations,
installed packages can be put into build cache tarballs, pushed to
installed packages can be put into build cache tarballs, uploaded to
your Spack mirror and then downloaded and installed by others.
Whenever a mirror provides prebuilt packages, Spack will take these packages
into account during concretization and installation, making ``spack install``
significantly faster.
--------------------------
Creating build cache files
--------------------------
.. note::
We use the terms "build cache" and "mirror" often interchangeably. Mirrors
are used during installation both for sources and prebuilt packages. Build
caches refer to mirrors that provide prebuilt packages.
----------------------
Creating a build cache
----------------------
A compressed tarball of an installed package is created. Tarballs are created
for all of its link and run dependency packages as well. Compressed tarballs are
signed with gpg and signature and tarball and put in a ``.spack`` file. Optionally,
the rpaths (and ids and deps on macOS) can be changed to paths relative to
the Spack install tree before the tarball is created.
Build caches are created via:
.. code-block:: console
$ spack buildcache push <path/url/mirror name> <spec>
$ spack buildcache create <spec>
This command takes the locally installed spec and its dependencies, and
creates tarballs of their install prefixes. It also generates metadata files,
signed with GPG. These tarballs and metadata files are then pushed to the
provided binary cache, which can be a local directory or a remote URL.
Here is an example where a build cache is created in a local directory named
"spack-cache", to which we push the "ninja" spec:
If you wanted to create a build cache in a local directory, you would provide
the ``-d`` argument to target that directory, again also specifying the spec.
Here is an example creating a local directory, "spack-cache" and creating
build cache files for the "ninja" spec:
.. code-block:: console
$ spack buildcache push ./spack-cache ninja
==> Pushing binary packages to file:///home/spackuser/spack/spack-cache/build_cache
$ mkdir -p ./spack-cache
$ spack buildcache create -d ./spack-cache ninja
==> Buildcache files will be output to file:///home/spackuser/spack/spack-cache/build_cache
gpgconf: socketdir is '/run/user/1000/gnupg'
gpg: using "E6DF6A8BD43208E4D6F392F23777740B7DBD643D" as default secret key for signing
Note that ``ninja`` must be installed locally for this to work.
Note that the targeted spec must already be installed. Once you have a build cache,
you can add it as a mirror, discussed next.
Once you have a build cache, you can add it as a mirror, discussed next.
.. warning::
Spack improved the format used for binary caches in v0.18. The entire v0.18 series
will be able to verify and install binary caches both in the new and in the old format.
Support for using the old format is expected to end in v0.19, so we advise users to
recreate relevant buildcaches using Spack v0.18 or higher.
---------------------------------------
Finding or installing build cache files
@@ -64,10 +66,10 @@ with:
.. code-block:: console
$ spack mirror add <name> <url or path>
$ spack mirror add <name> <url>
Both web URLs and local paths on the filesystem can be specified. In the previous
Note that the url can be a web url _or_ a local filesystem location. In the previous
example, you might add the directory "spack-cache" and call it ``mymirror``:
@@ -92,7 +94,7 @@ this new build cache as follows:
.. code-block:: console
$ spack buildcache update-index ./spack-cache
$ spack buildcache update-index -d spack-cache/
Now you can use list:
@@ -103,38 +105,46 @@ Now you can use list:
-- linux-ubuntu20.04-skylake / gcc@9.3.0 ------------------------
ninja@1.10.2
With ``mymirror`` configured and an index available, Spack will automatically
use it during concretization and installation. That means that you can expect
``spack install ninja`` to fetch prebuilt packages from the mirror. Let's
verify by re-installing ninja:
Great! So now let's say you have a different spack installation, or perhaps just
a different environment for the same one, and you want to install a package from
that build cache. Let's first uninstall the actual library "ninja" to see if we can
re-install it from the cache.
.. code-block:: console
$ spack uninstall ninja
$ spack install ninja
==> Installing ninja-1.11.1-yxferyhmrjkosgta5ei6b4lqf6bxbscz
==> Fetching file:///home/spackuser/spack/spack-cache/build_cache/linux-ubuntu20.04-skylake-gcc-9.3.0-ninja-1.10.2-yxferyhmrjkosgta5ei6b4lqf6bxbscz.spec.json.sig
gpg: Signature made Do 12 Jan 2023 16:01:04 CET
gpg: using RSA key 61B82B2B2350E171BD17A1744E3A689061D57BF6
gpg: Good signature from "example (GPG created for Spack) <example@example.com>" [ultimate]
==> Fetching file:///home/spackuser/spack/spack-cache/build_cache/linux-ubuntu20.04-skylake/gcc-9.3.0/ninja-1.10.2/linux-ubuntu20.04-skylake-gcc-9.3.0-ninja-1.10.2-yxferyhmrjkosgta5ei6b4lqf6bxbscz.spack
==> Extracting ninja-1.10.2-yxferyhmrjkosgta5ei6b4lqf6bxbscz from binary cache
==> ninja: Successfully installed ninja-1.11.1-yxferyhmrjkosgta5ei6b4lqf6bxbscz
Search: 0.00s. Fetch: 0.17s. Install: 0.12s. Total: 0.29s
[+] /home/harmen/spack/opt/spack/linux-ubuntu20.04-skylake/gcc-9.3.0/ninja-1.11.1-yxferyhmrjkosgta5ei6b4lqf6bxbscz
It worked! You've just completed a full example of creating a build cache with
a spec of interest, adding it as a mirror, updating its index, listing the contents,
and finally, installing from it.
By default Spack falls back to building from sources when the mirror is not available
or when the package is simply not already available. To force Spack to only install
prebuilt packages, you can use
And now reinstall from the buildcache
.. code-block:: console
$ spack install --use-buildcache only <package>
$ spack buildcache install ninja
==> buildcache spec(s) matching ninja
==> Fetching file:///home/spackuser/spack/spack-cache/build_cache/linux-ubuntu20.04-skylake/gcc-9.3.0/ninja-1.10.2/linux-ubuntu20.04-skylake-gcc-9.3.0-ninja-1.10.2-i4e5luour7jxdpc3bkiykd4imke3mkym.spack
####################################################################################################################################### 100.0%
==> Installing buildcache for spec ninja@1.10.2%gcc@9.3.0 arch=linux-ubuntu20.04-skylake
gpgconf: socketdir is '/run/user/1000/gnupg'
gpg: Signature made Tue 23 Mar 2021 10:16:29 PM MDT
gpg: using RSA key E6DF6A8BD43208E4D6F392F23777740B7DBD643D
gpg: Good signature from "spackuser (GPG created for Spack) <spackuser@noreply.users.github.com>" [ultimate]
It worked! You've just completed a full example of creating a build cache with
a spec of interest, adding it as a mirror, updating it's index, listing the contents,
and finally, installing from it.
Note that the above command is intended to install a particular package to a
build cache you have created, and not to install a package from a build cache.
For the latter, once a mirror is added, by default when you do ``spack install`` the ``--use-cache``
flag is set, and you will install a package from a build cache if it is available.
If you want to always use the cache, you can do:
.. code-block:: console
$ spack install --cache-only <package>
For example, to combine all of the commands above to add the E4S build cache
and then install from it exclusively, you would do:
@@ -143,7 +153,7 @@ and then install from it exclusively, you would do:
$ spack mirror add E4S https://cache.e4s.io
$ spack buildcache keys --install --trust
$ spack install --use-buildcache only <package>
$ spack install --cache-only <package>
We use ``--install`` and ``--trust`` to say that we are installing keys to our
keyring, and trusting all downloaded keys.
@@ -173,7 +183,7 @@ need to be adjusted for better re-locatability.
--------------------
^^^^^^^^^^^^^^^^^^^^^^^^^^^
``spack buildcache push``
``spack buildcache create``
^^^^^^^^^^^^^^^^^^^^^^^^^^^
Create tarball of installed Spack package and all dependencies.

View File

@@ -1,4 +1,4 @@
.. Copyright 2013-2023 Lawrence Livermore National Security, LLC and other
.. Copyright 2013-2021 Lawrence Livermore National Security, LLC and other
Spack Project Developers. See the top-level COPYRIGHT file for details.
SPDX-License-Identifier: (Apache-2.0 OR MIT)
@@ -32,14 +32,9 @@ can't be found. You can readily check if any prerequisite for using Spack is mis
Spack will take care of bootstrapping any missing dependency marked as [B]. Dependencies marked as [-] are instead required to be found on the system.
% echo $?
1
In the case of the output shown above Spack detected that both ``clingo`` and ``gnupg``
are missing and it's giving detailed information on why they are needed and whether
they can be bootstrapped. The return code of this command summarizes the results, if any
dependencies are missing the return code is ``1``, otherwise ``0``. Running a command that
concretizes a spec, like:
they can be bootstrapped. Running a command that concretize a spec, like:
.. code-block:: console
@@ -49,7 +44,7 @@ concretizes a spec, like:
==> Installing "clingo-bootstrap@spack%apple-clang@12.0.0~docs~ipo+python build_type=Release arch=darwin-catalina-x86_64" from a buildcache
[ ... ]
automatically triggers the bootstrapping of clingo from pre-built binaries as expected.
triggers the bootstrapping of clingo from pre-built binaries as expected.
Users can also bootstrap all the dependencies needed by Spack in a single command, which
might be useful to setup containers or other similar environments:

View File

@@ -1,4 +1,4 @@
.. Copyright 2013-2023 Lawrence Livermore National Security, LLC and other
.. Copyright 2013-2022 Lawrence Livermore National Security, LLC and other
Spack Project Developers. See the top-level COPYRIGHT file for details.
SPDX-License-Identifier: (Apache-2.0 OR MIT)
@@ -272,7 +272,7 @@ Selection of the target microarchitectures
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
The options under the ``targets`` attribute control which targets are considered during a solve.
Currently the options in this section are only configurable from the ``concretizer.yaml`` file
Currently the options in this section are only configurable from the ``concretization.yaml`` file
and there are no corresponding command line arguments to enable them for a single solve.
The ``granularity`` option can take two possible values: ``microarchitectures`` and ``generic``.
@@ -325,99 +325,42 @@ on the command line, because it can specify constraints on packages
is not possible to specify constraints on dependencies while also keeping
those dependencies optional.
^^^^^^^^^^^^^^^^^^^
Requirements syntax
^^^^^^^^^^^^^^^^^^^
The package requirements configuration is specified in ``packages.yaml``,
keyed by package name and expressed using the Spec syntax. In the simplest
case you can specify attributes that you always want the package to have
by providing a single spec string to ``require``:
The package requirements configuration is specified in ``packages.yaml``
keyed by package name:
.. code-block:: yaml
packages:
libfabric:
require: "@1.13.2"
In the above example, ``libfabric`` will always build with version 1.13.2. If you
need to compose multiple configuration scopes ``require`` accepts a list of
strings:
.. code-block:: yaml
packages:
libfabric:
require:
- "@1.13.2"
- "%gcc"
In this case ``libfabric`` will always build with version 1.13.2 **and** using GCC
as a compiler.
For more complex use cases, require accepts also a list of objects. These objects
must have either a ``any_of`` or a ``one_of`` field, containing a list of spec strings,
and they can optionally have a ``when`` and a ``message`` attribute:
.. code-block:: yaml
packages:
openmpi:
require:
- any_of: ["@4.1.5", "%gcc"]
message: "in this example only 4.1.5 can build with other compilers"
``any_of`` is a list of specs. One of those specs must be satisfied
and it is also allowed for the concretized spec to match more than one.
In the above example, that means you could build ``openmpi@4.1.5%gcc``,
``openmpi@4.1.5%clang`` or ``openmpi@3.9%gcc``, but
not ``openmpi@3.9%clang``.
If a custom message is provided, and the requirement is not satisfiable,
Spack will print the custom error message:
.. code-block:: console
$ spack spec openmpi@3.9%clang
==> Error: in this example only 4.1.5 can build with other compilers
We could express a similar requirement using the ``when`` attribute:
.. code-block:: yaml
packages:
openmpi:
require:
- any_of: ["%gcc"]
when: "@:4.1.4"
message: "in this example only 4.1.5 can build with other compilers"
In the example above, if the version turns out to be 4.1.4 or less, we require the compiler to be GCC.
For readability, Spack also allows a ``spec`` key accepting a string when there is only a single
constraint:
.. code-block:: yaml
packages:
openmpi:
require:
- spec: "%gcc"
when: "@:4.1.4"
message: "in this example only 4.1.5 can build with other compilers"
This code snippet and the one before it are semantically equivalent.
Finally, instead of ``any_of`` you can use ``one_of`` which also takes a list of specs. The final
concretized spec must match one and only one of them:
.. code-block:: yaml
packages:
- any_of: ["~cuda", "%gcc"]
mpich:
require:
- one_of: ["+cuda", "+rocm"]
require:
- one_of: ["+cuda", "+rocm"]
In the example above, that means you could build ``mpich+cuda`` or ``mpich+rocm`` but not ``mpich+cuda+rocm``.
Requirements are expressed using Spec syntax (the same as what is provided
to ``spack install``). In the simplest case, you can specify attributes
that you always want the package to have by providing a single spec to
``require``; in the above example, ``libfabric`` will always build
with version 1.13.2.
You can provide a more-relaxed constraint and allow the concretizer to
choose between a set of options using ``any_of`` or ``one_of``:
* ``any_of`` is a list of specs. One of those specs must be satisfied
and it is also allowed for the concretized spec to match more than one.
In the above example, that means you could build ``openmpi+cuda%gcc``,
``openmpi~cuda%clang`` or ``openmpi~cuda%gcc`` (in the last case,
note that both specs in the ``any_of`` for ``openmpi`` are
satisfied).
* ``one_of`` is also a list of specs, and the final concretized spec
must match exactly one of them. In the above example, that means
you could build ``mpich+cuda`` or ``mpich+rocm`` but not
``mpich+cuda+rocm`` (note the current package definition for
``mpich`` already includes a conflict, so this is redundant but
still demonstrates the concept).
.. note::
@@ -425,13 +368,6 @@ In the example above, that means you could build ``mpich+cuda`` or ``mpich+rocm`
preference: items that appear earlier in the list are preferred
(note that these preferences can be ignored in favor of others).
.. note::
When using a conditional requirement, Spack is allowed to actively avoid the triggering
condition (the ``when=...`` spec) if that leads to a concrete spec with better scores in
the optimization criteria. To check the current optimization criteria and their
priorities you can run ``spack solve zlib``.
^^^^^^^^^^^^^^^^^^^^^^^^^^^^
Setting default requirements
^^^^^^^^^^^^^^^^^^^^^^^^^^^^

View File

@@ -1,4 +1,4 @@
.. Copyright 2013-2023 Lawrence Livermore National Security, LLC and other
.. Copyright 2013-2022 Lawrence Livermore National Security, LLC and other
Spack Project Developers. See the top-level COPYRIGHT file for details.
SPDX-License-Identifier: (Apache-2.0 OR MIT)

View File

@@ -1,4 +1,4 @@
.. Copyright 2013-2023 Lawrence Livermore National Security, LLC and other
.. Copyright 2013-2022 Lawrence Livermore National Security, LLC and other
Spack Project Developers. See the top-level COPYRIGHT file for details.
SPDX-License-Identifier: (Apache-2.0 OR MIT)

View File

@@ -1,4 +1,4 @@
.. Copyright 2013-2023 Lawrence Livermore National Security, LLC and other
.. Copyright 2013-2022 Lawrence Livermore National Security, LLC and other
Spack Project Developers. See the top-level COPYRIGHT file for details.
SPDX-License-Identifier: (Apache-2.0 OR MIT)
@@ -9,32 +9,9 @@
Bundle
------
``BundlePackage`` represents a set of packages that are expected to work
well together, such as a collection of commonly used software libraries.
The associated software is specified as dependencies.
If it makes sense, variants, conflicts, and requirements can be added to
the package. :ref:`Variants <variants>` ensure that common build options
are consistent across the packages supporting them. :ref:`Conflicts
and requirements <packaging_conflicts>` prevent attempts to build with known
bugs or limitations.
For example, if ``MyBundlePackage`` is known to only build on ``linux``,
it could use the ``require`` directive as follows:
.. code-block:: python
require("platform=linux", msg="MyBundlePackage only builds on linux")
Spack has a number of built-in bundle packages, such as:
* `AmdAocl <https://github.com/spack/spack/blob/develop/var/spack/repos/builtin/packages/amd-aocl/package.py>`_
* `EcpProxyApps <https://github.com/spack/spack/blob/develop/var/spack/repos/builtin/packages/ecp-proxy-apps/package.py>`_
* `Libc <https://github.com/spack/spack/blob/develop/var/spack/repos/builtin/packages/libc/package.py>`_
* `Xsdk <https://github.com/spack/spack/blob/develop/var/spack/repos/builtin/packages/xsdk/package.py>`_
where ``Xsdk`` also inherits from ``CudaPackage`` and ``RocmPackage`` and
``Libc`` is a virtual bundle package for the C standard library.
``BundlePackage`` represents a set of packages that are expected to work well
together, such as a collection of commonly used software libraries. The
associated software is specified as bundle dependencies.
^^^^^^^^

View File

@@ -1,4 +1,4 @@
.. Copyright 2013-2023 Lawrence Livermore National Security, LLC and other
.. Copyright 2013-2021 Lawrence Livermore National Security, LLC and other
Spack Project Developers. See the top-level COPYRIGHT file for details.
SPDX-License-Identifier: (Apache-2.0 OR MIT)

View File

@@ -1,4 +1,4 @@
.. Copyright 2013-2023 Lawrence Livermore National Security, LLC and other
.. Copyright 2013-2022 Lawrence Livermore National Security, LLC and other
Spack Project Developers. See the top-level COPYRIGHT file for details.
SPDX-License-Identifier: (Apache-2.0 OR MIT)

View File

@@ -1,4 +1,4 @@
.. Copyright 2013-2023 Lawrence Livermore National Security, LLC and other
.. Copyright 2013-2022 Lawrence Livermore National Security, LLC and other
Spack Project Developers. See the top-level COPYRIGHT file for details.
SPDX-License-Identifier: (Apache-2.0 OR MIT)
@@ -28,14 +28,11 @@ This package provides the following variants:
* **cuda_arch**
This variant supports the optional specification of one or multiple architectures.
This variant supports the optional specification of the architecture.
Valid values are maintained in the ``cuda_arch_values`` property and
are the numeric character equivalent of the compute capability version
(e.g., '10' for version 1.0). Each provided value affects associated
``CUDA`` dependencies and compiler conflicts.
The variant builds both PTX code for the _virtual_ architecture
(e.g. ``compute_10``) and binary code for the _real_ architecture (e.g. ``sm_10``).
GPUs and their compute capability versions are listed at
https://developer.nvidia.com/cuda-gpus .

View File

@@ -1,4 +1,4 @@
.. Copyright 2013-2023 Lawrence Livermore National Security, LLC and other
.. Copyright 2013-2022 Lawrence Livermore National Security, LLC and other
Spack Project Developers. See the top-level COPYRIGHT file for details.
SPDX-License-Identifier: (Apache-2.0 OR MIT)

View File

@@ -1,4 +1,4 @@
.. Copyright 2013-2023 Lawrence Livermore National Security, LLC and other
.. Copyright 2013-2022 Lawrence Livermore National Security, LLC and other
Spack Project Developers. See the top-level COPYRIGHT file for details.
SPDX-License-Identifier: (Apache-2.0 OR MIT)
@@ -76,55 +76,6 @@ To build with with ``icx``, do ::
spack install patchelf%oneapi
Using oneAPI Spack environment
-------------------------------
In this example, we build lammps with ``icx`` using Spack environment for oneAPI packages created by Intel. The
compilers are installed with Spack like in example above.
Install the oneAPI compilers::
spack install intel-oneapi-compilers
Add the compilers to your ``compilers.yaml`` so Spack can use them::
spack compiler add `spack location -i intel-oneapi-compilers`/compiler/latest/linux/bin/intel64
spack compiler add `spack location -i intel-oneapi-compilers`/compiler/latest/linux/bin
Verify that the compilers are available::
spack compiler list
Clone `spack-configs <https://github.com/spack/spack-configs>`_ repo and activate Intel oneAPI CPU environment::
git clone https://github.com/spack/spack-configs
spack env activate spack-configs/INTEL/CPU
spack concretize -f
`Intel oneAPI CPU environment <https://github.com/spack/spack-configs/blob/main/INTEL/CPU/spack.yaml>`_ contains applications tested and validated by Intel, this list is constantly extended. And currently it supports:
- `Devito <https://www.devitoproject.org/>`_
- `GROMACS <https://www.gromacs.org/>`_
- `HPCG <https://www.hpcg-benchmark.org/>`_
- `HPL <https://netlib.org/benchmark/hpl/>`_
- `LAMMPS <https://www.lammps.org/#gsc.tab=0>`_
- `OpenFOAM <https://www.openfoam.com/>`_
- `Quantum Espresso <https://www.quantum-espresso.org/>`_
- `STREAM <https://www.cs.virginia.edu/stream/>`_
- `WRF <https://github.com/wrf-model/WRF>`_
To build lammps with oneAPI compiler from this environment just run::
spack install lammps
Compiled binaries can be find using::
spack cd -i lammps
You can do the same for all other applications from this environment.
Using oneAPI MPI to Satisfy a Virtual Dependence
------------------------------------------------------
@@ -173,7 +124,7 @@ Using oneAPI Tools Installed by Spack
=====================================
Spack can be a convenient way to install and configure compilers and
libraries, even if you do not intend to build a Spack package. If you
libaries, even if you do not intend to build a Spack package. If you
want to build a Makefile project using Spack-installed oneAPI compilers,
then use spack to configure your environment::

View File

@@ -1,4 +1,4 @@
.. Copyright 2013-2023 Lawrence Livermore National Security, LLC and other
.. Copyright 2013-2022 Lawrence Livermore National Security, LLC and other
Spack Project Developers. See the top-level COPYRIGHT file for details.
SPDX-License-Identifier: (Apache-2.0 OR MIT)
@@ -397,7 +397,7 @@ for specifics and examples for ``packages.yaml`` files.
.. If your system administrator did not provide modules for pre-installed Intel
tools, you could do well to ask for them, because installing multiple copies
of the Intel tools, as is won't to happen once Spack is in the picture, is
of the Intel tools, as is wont to happen once Spack is in the picture, is
bound to stretch disk space and patience thin. If you *are* the system
administrator and are still new to modules, then perhaps it's best to follow
the `next section <Installing Intel tools within Spack_>`_ and install the tools
@@ -653,7 +653,7 @@ follow `the next section <intel-install-libs_>`_ instead.
* If you specified a custom variant (for example ``+vtune``) you may want to add this as your
preferred variant in the packages configuration for the ``intel-parallel-studio`` package
as described in :ref:`package-preferences`. Otherwise you will have to specify
the variant every time ``intel-parallel-studio`` is being used as ``mkl``, ``fftw`` or ``mpi``
the variant everytime ``intel-parallel-studio`` is being used as ``mkl``, ``fftw`` or ``mpi``
implementation to avoid pulling in a different variant.
* To set the Intel compilers for default use in Spack, instead of the usual ``%gcc``,

View File

@@ -1,4 +1,4 @@
.. Copyright 2013-2023 Lawrence Livermore National Security, LLC and other
.. Copyright 2013-2022 Lawrence Livermore National Security, LLC and other
Spack Project Developers. See the top-level COPYRIGHT file for details.
SPDX-License-Identifier: (Apache-2.0 OR MIT)

View File

@@ -1,4 +1,4 @@
.. Copyright 2013-2023 Lawrence Livermore National Security, LLC and other
.. Copyright 2013-2022 Lawrence Livermore National Security, LLC and other
Spack Project Developers. See the top-level COPYRIGHT file for details.
SPDX-License-Identifier: (Apache-2.0 OR MIT)

View File

@@ -1,4 +1,4 @@
.. Copyright 2013-2023 Lawrence Livermore National Security, LLC and other
.. Copyright 2013-2022 Lawrence Livermore National Security, LLC and other
Spack Project Developers. See the top-level COPYRIGHT file for details.
SPDX-License-Identifier: (Apache-2.0 OR MIT)

View File

@@ -1,4 +1,4 @@
.. Copyright 2013-2023 Lawrence Livermore National Security, LLC and other
.. Copyright 2013-2022 Lawrence Livermore National Security, LLC and other
Spack Project Developers. See the top-level COPYRIGHT file for details.
SPDX-License-Identifier: (Apache-2.0 OR MIT)

View File

@@ -1,4 +1,4 @@
.. Copyright 2013-2023 Lawrence Livermore National Security, LLC and other
.. Copyright 2013-2022 Lawrence Livermore National Security, LLC and other
Spack Project Developers. See the top-level COPYRIGHT file for details.
SPDX-License-Identifier: (Apache-2.0 OR MIT)

View File

@@ -1,4 +1,4 @@
.. Copyright 2013-2023 Lawrence Livermore National Security, LLC and other
.. Copyright 2013-2022 Lawrence Livermore National Security, LLC and other
Spack Project Developers. See the top-level COPYRIGHT file for details.
SPDX-License-Identifier: (Apache-2.0 OR MIT)

View File

@@ -1,4 +1,4 @@
.. Copyright 2013-2023 Lawrence Livermore National Security, LLC and other
.. Copyright 2013-2022 Lawrence Livermore National Security, LLC and other
Spack Project Developers. See the top-level COPYRIGHT file for details.
SPDX-License-Identifier: (Apache-2.0 OR MIT)
@@ -366,7 +366,7 @@ If the ``pyproject.toml`` lists ``mesonpy`` as the ``build-backend``,
it uses the meson build system. Meson uses the default
``pyproject.toml`` keys to list dependencies.
See https://meson-python.readthedocs.io/en/latest/tutorials/introduction.html
See https://meson-python.readthedocs.io/en/latest/usage/start.html
for more information.
"""
@@ -582,7 +582,7 @@ libraries. Make sure not to add modules/packages containing the word
"test", as these likely won't end up in the installation directory,
or may require test dependencies like pytest to be installed.
Instead of defining the ``import_modules`` explicitly, only the subset
Instead of defining the ``import_modules`` explicity, only the subset
of module names to be skipped can be defined by using ``skip_modules``.
If a defined module has submodules, they are skipped as well, e.g.,
in case the ``plotting`` modules should be excluded from the

View File

@@ -1,4 +1,4 @@
.. Copyright 2013-2023 Lawrence Livermore National Security, LLC and other
.. Copyright 2013-2022 Lawrence Livermore National Security, LLC and other
Spack Project Developers. See the top-level COPYRIGHT file for details.
SPDX-License-Identifier: (Apache-2.0 OR MIT)

View File

@@ -1,4 +1,4 @@
.. Copyright 2013-2023 Lawrence Livermore National Security, LLC and other
.. Copyright 2013-2021 Lawrence Livermore National Security, LLC and other
Spack Project Developers. See the top-level COPYRIGHT file for details.
SPDX-License-Identifier: (Apache-2.0 OR MIT)

View File

@@ -1,4 +1,4 @@
.. Copyright 2013-2023 Lawrence Livermore National Security, LLC and other
.. Copyright 2013-2022 Lawrence Livermore National Security, LLC and other
Spack Project Developers. See the top-level COPYRIGHT file for details.
SPDX-License-Identifier: (Apache-2.0 OR MIT)

View File

@@ -1,4 +1,4 @@
.. Copyright 2013-2023 Lawrence Livermore National Security, LLC and other
.. Copyright 2013-2022 Lawrence Livermore National Security, LLC and other
Spack Project Developers. See the top-level COPYRIGHT file for details.
SPDX-License-Identifier: (Apache-2.0 OR MIT)

View File

@@ -1,4 +1,4 @@
.. Copyright 2013-2023 Lawrence Livermore National Security, LLC and other
.. Copyright 2013-2022 Lawrence Livermore National Security, LLC and other
Spack Project Developers. See the top-level COPYRIGHT file for details.
SPDX-License-Identifier: (Apache-2.0 OR MIT)

View File

@@ -1,4 +1,4 @@
.. Copyright 2013-2023 Lawrence Livermore National Security, LLC and other
.. Copyright 2013-2022 Lawrence Livermore National Security, LLC and other
Spack Project Developers. See the top-level COPYRIGHT file for details.
SPDX-License-Identifier: (Apache-2.0 OR MIT)

View File

@@ -1,4 +1,4 @@
.. Copyright 2013-2023 Lawrence Livermore National Security, LLC and other
.. Copyright 2013-2022 Lawrence Livermore National Security, LLC and other
Spack Project Developers. See the top-level COPYRIGHT file for details.
SPDX-License-Identifier: (Apache-2.0 OR MIT)
@@ -32,7 +32,7 @@ By default, these phases run:
.. code-block:: console
$ sip-build --verbose --target-dir ...
$ python configure.py --bindir ... --destdir ...
$ make
$ make install
@@ -41,30 +41,30 @@ By default, these phases run:
Important files
^^^^^^^^^^^^^^^
Each SIP package comes with a custom configuration file written in Python.
For newer packages, this is called ``project.py``, while in older packages,
it may be called ``configure.py``. This script contains instructions to build
the project.
Each SIP package comes with a custom ``configure.py`` build script,
written in Python. This script contains instructions to build the project.
^^^^^^^^^^^^^^^^^^^^^^^^^
Build system dependencies
^^^^^^^^^^^^^^^^^^^^^^^^^
``SIPPackage`` requires several dependencies. Python and SIP are needed at build-time
to run the aforementioned configure script. Python is also needed at run-time to
actually use the installed Python library. And as we are building Python bindings
for C/C++ libraries, Python is also needed as a link dependency. All of these
dependencies are automatically added via the base class.
``SIPPackage`` requires several dependencies. Python is needed to run
the ``configure.py`` build script, and to run the resulting Python
libraries. Qt is needed to provide the ``qmake`` command. SIP is also
needed to build the package. All of these dependencies are automatically
added via the base class
.. code-block:: python
extends("python", type=("build", "link", "run"))
depends_on("py-sip", type="build")
extends('python')
depends_on('qt', type='build')
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
Passing arguments to ``sip-build``
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
depends_on('py-sip', type='build')
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
Passing arguments to ``configure.py``
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
Each phase comes with a ``<phase_args>`` function that can be used to pass
arguments to that particular phase. For example, if you need to pass
@@ -72,11 +72,11 @@ arguments to the configure phase, you can use:
.. code-block:: python
def configure_args(self):
return ["--no-python-dbus"]
def configure_args(self, spec, prefix):
return ['--no-python-dbus']
A list of valid options can be found by running ``sip-build --help``.
A list of valid options can be found by running ``python configure.py --help``.
^^^^^^^
Testing

View File

@@ -1,4 +1,4 @@
.. Copyright 2013-2023 Lawrence Livermore National Security, LLC and other
.. Copyright 2013-2022 Lawrence Livermore National Security, LLC and other
Spack Project Developers. See the top-level COPYRIGHT file for details.
SPDX-License-Identifier: (Apache-2.0 OR MIT)

View File

@@ -1,4 +1,4 @@
.. Copyright 2013-2023 Lawrence Livermore National Security, LLC and other
.. Copyright 2013-2022 Lawrence Livermore National Security, LLC and other
Spack Project Developers. See the top-level COPYRIGHT file for details.
SPDX-License-Identifier: (Apache-2.0 OR MIT)
@@ -58,7 +58,9 @@ Testing
``WafPackage`` also provides ``test`` and ``installtest`` methods,
which are run after the ``build`` and ``install`` phases, respectively.
By default, these phases do nothing, but you can override them to
run package-specific unit tests.
run package-specific unit tests. For example, the
`py-py2cairo <https://github.com/spack/spack/blob/develop/var/spack/repos/builtin/packages/py-py2cairo/package.py>`_
package uses:
.. code-block:: python

View File

@@ -1,4 +1,4 @@
.. Copyright 2013-2023 Lawrence Livermore National Security, LLC and other
.. Copyright 2013-2022 Lawrence Livermore National Security, LLC and other
Spack Project Developers. See the top-level COPYRIGHT file for details.
SPDX-License-Identifier: (Apache-2.0 OR MIT)

View File

@@ -1,4 +1,4 @@
# Copyright 2013-2023 Lawrence Livermore National Security, LLC and other
# Copyright 2013-2022 Lawrence Livermore National Security, LLC and other
# Spack Project Developers. See the top-level COPYRIGHT file for details.
#
# SPDX-License-Identifier: (Apache-2.0 OR MIT)
@@ -36,7 +36,7 @@
if not os.path.exists(link_name):
os.symlink(os.path.abspath("../../.."), link_name, target_is_directory=True)
sys.path.insert(0, os.path.abspath("_spack_root/lib/spack/external"))
sys.path.insert(0, os.path.abspath("_spack_root/lib/spack/external/_vendoring"))
sys.path.insert(0, os.path.abspath("_spack_root/lib/spack/external/pytest-fallback"))
sys.path.append(os.path.abspath("_spack_root/lib/spack/"))
# Add the Spack bin directory to the path so that we can use its output in docs.
@@ -76,20 +76,12 @@
"--output-dir=.", # Directory to place all output
"--module-first", # emit module docs before submodule docs
]
sphinx_apidoc(
apidoc_args
+ [
"_spack_root/lib/spack/spack",
"_spack_root/lib/spack/spack/test/*.py",
"_spack_root/lib/spack/spack/test/cmd/*.py",
]
)
sphinx_apidoc(apidoc_args + ["_spack_root/lib/spack/spack"])
sphinx_apidoc(apidoc_args + ["_spack_root/lib/spack/llnl"])
# Enable todo items
todo_include_todos = True
#
# Disable duplicate cross-reference warnings.
#
@@ -97,7 +89,9 @@ class PatchedPythonDomain(PythonDomain):
def resolve_xref(self, env, fromdocname, builder, typ, target, node, contnode):
if "refspecific" in node:
del node["refspecific"]
return super().resolve_xref(env, fromdocname, builder, typ, target, node, contnode)
return super(PatchedPythonDomain, self).resolve_xref(
env, fromdocname, builder, typ, target, node, contnode
)
#
@@ -147,6 +141,7 @@ def setup(sphinx):
# Get nice vector graphics
graphviz_output_format = "svg"
# Add any paths that contain templates here, relative to this directory.
templates_path = ["_templates"]
@@ -161,7 +156,7 @@ def setup(sphinx):
# General information about the project.
project = "Spack"
copyright = "2013-2023, Lawrence Livermore National Laboratory."
copyright = "2013-2021, Lawrence Livermore National Laboratory."
# The version info for the project you're documenting, acts as replacement for
# |version| and |release|, also used in various other places throughout the
@@ -212,11 +207,8 @@ def setup(sphinx):
("py:class", "spack.repo._PrependFileLoader"),
("py:class", "spack.build_systems._checks.BaseBuilder"),
# Spack classes that intersphinx is unable to resolve
("py:class", "spack.version.StandardVersion"),
("py:class", "spack.version.VersionBase"),
("py:class", "spack.spec.DependencySpec"),
("py:class", "spack.spec.InstallStatus"),
("py:class", "spack.spec.SpecfileReaderBase"),
("py:class", "spack.install_test.Pb"),
]
# The reST default role (used for this markup: `text`) to use for all documents.
@@ -232,8 +224,30 @@ def setup(sphinx):
# If true, sectionauthor and moduleauthor directives will be shown in the
# output. They are ignored by default.
# show_authors = False
sys.path.append("./_pygments")
pygments_style = "style.SpackStyle"
# The name of the Pygments (syntax highlighting) style to use.
# We use our own extension of the default style with a few modifications
from pygments.style import Style
from pygments.styles.default import DefaultStyle
from pygments.token import Comment, Generic, Text
class SpackStyle(DefaultStyle):
styles = DefaultStyle.styles.copy()
background_color = "#f4f4f8"
styles[Generic.Output] = "#355"
styles[Generic.Prompt] = "bold #346ec9"
import pkg_resources
dist = pkg_resources.Distribution(__file__)
sys.path.append(".") # make 'conf' module findable
ep = pkg_resources.EntryPoint.parse("spack = conf:SpackStyle", dist=dist)
dist._ep_map = {"pygments.styles": {"plugin1": ep}}
pkg_resources.working_set.add(dist)
pygments_style = "spack"
# A list of ignored prefixes for module index sorting.
# modindex_common_prefix = []
@@ -318,20 +332,23 @@ def setup(sphinx):
# Output file base name for HTML help builder.
htmlhelp_basename = "Spackdoc"
# -- Options for LaTeX output --------------------------------------------------
latex_elements = {
# The paper size ('letterpaper' or 'a4paper').
# 'papersize': 'letterpaper',
#'papersize': 'letterpaper',
# The font size ('10pt', '11pt' or '12pt').
# 'pointsize': '10pt',
#'pointsize': '10pt',
# Additional stuff for the LaTeX preamble.
# 'preamble': '',
#'preamble': '',
}
# Grouping the document tree into LaTeX files. List of tuples
# (source start file, target name, title, author, documentclass [howto/manual]).
latex_documents = [("index", "Spack.tex", "Spack Documentation", "Todd Gamblin", "manual")]
latex_documents = [
("index", "Spack.tex", "Spack Documentation", "Todd Gamblin", "manual"),
]
# The name of an image file (relative to this directory) to place at the top of
# the title page.
@@ -378,7 +395,7 @@ def setup(sphinx):
"Spack",
"One line description of project.",
"Miscellaneous",
)
),
]
# Documents to append as an appendix to all manuals.
@@ -394,4 +411,6 @@ def setup(sphinx):
# -- Extension configuration -------------------------------------------------
# sphinx.ext.intersphinx
intersphinx_mapping = {"python": ("https://docs.python.org/3", None)}
intersphinx_mapping = {
"python": ("https://docs.python.org/3", None),
}

View File

@@ -1,4 +1,4 @@
.. Copyright 2013-2023 Lawrence Livermore National Security, LLC and other
.. Copyright 2013-2022 Lawrence Livermore National Security, LLC and other
Spack Project Developers. See the top-level COPYRIGHT file for details.
SPDX-License-Identifier: (Apache-2.0 OR MIT)
@@ -222,7 +222,7 @@ and location. (See the *Configuration settings* section of ``man
ccache`` to learn more about the default settings and how to change
them). Please note that we currently disable ccache's ``hash_dir``
feature to avoid an issue with the stage directory (see
https://github.com/spack/spack/pull/3761#issuecomment-294352232).
https://github.com/LLNL/spack/pull/3761#issuecomment-294352232).
-----------------------
``shared_linking:type``
@@ -292,13 +292,12 @@ It is also worth noting that:
non_bindable_shared_objects = ["libinterface.so"]
----------------------
``install_status``
``terminal_title``
----------------------
When set to ``true``, Spack will show information about its current progress
as well as the current and total package numbers. Progress is shown both
in the terminal title and inline. Setting it to ``false`` will not show any
progress information.
By setting this option to ``true``, Spack will update the terminal's title to
provide information about its current progress as well as the current and
total package numbers.
To work properly, this requires your terminal to reset its title after
Spack has finished its work, otherwise Spack's status information will

View File

@@ -1,4 +1,4 @@
.. Copyright 2013-2023 Lawrence Livermore National Security, LLC and other
.. Copyright 2013-2022 Lawrence Livermore National Security, LLC and other
Spack Project Developers. See the top-level COPYRIGHT file for details.
SPDX-License-Identifier: (Apache-2.0 OR MIT)
@@ -20,9 +20,8 @@ case you want to skip directly to specific docs:
* :ref:`packages.yaml <build-settings>`
* :ref:`repos.yaml <repositories>`
You can also add any of these as inline configuration in the YAML
manifest file (``spack.yaml``) describing an :ref:`environment
<environment-configuration>`.
You can also add any of these as inline configuration in ``spack.yaml``
in an :ref:`environment <environment-configuration>`.
-----------
YAML Format
@@ -228,9 +227,6 @@ You can get the name to use for ``<platform>`` by running ``spack arch
--platform``. The system config scope has a ``<platform>`` section for
sites at which ``/etc`` is mounted on multiple heterogeneous machines.
.. _config-scope-precedence:
----------------
Scope Precedence
----------------
@@ -243,11 +239,6 @@ lower-precedence settings. Completely ignoring higher-level configuration
options is supported with the ``::`` notation for keys (see
:ref:`config-overrides` below).
There are also special notations for string concatenation and precendense override.
Using the ``+:`` notation can be used to force *prepending* strings or lists. For lists, this is identical
to the default behavior. Using the ``-:`` works similarly, but for *appending* values.
:ref:`config-prepend-append`
^^^^^^^^^^^
Simple keys
^^^^^^^^^^^
@@ -288,47 +279,6 @@ command:
- ~/.spack/stage
.. _config-prepend-append:
^^^^^^^^^^^^^^^^^^^^
String Concatenation
^^^^^^^^^^^^^^^^^^^^
Above, the user ``config.yaml`` *completely* overrides specific settings in the
default ``config.yaml``. Sometimes, it is useful to add a suffix/prefix
to a path or name. To do this, you can use the ``-:`` notation for *append*
string concatenation at the end of a key in a configuration file. For example:
.. code-block:: yaml
:emphasize-lines: 1
:caption: ~/.spack/config.yaml
config:
install_tree-: /my/custom/suffix/
Spack will then append to the lower-precedence configuration under the
``install_tree-:`` section:
.. code-block:: console
$ spack config get config
config:
install_tree: /some/other/directory/my/custom/suffix
build_stage:
- $tempdir/$user/spack-stage
- ~/.spack/stage
Similarly, ``+:`` can be used to *prepend* to a path or name:
.. code-block:: yaml
:emphasize-lines: 1
:caption: ~/.spack/config.yaml
config:
install_tree+: /my/custom/suffix/
.. _config-overrides:
^^^^^^^^^^^^^^^^^^^^^^^^^^

View File

@@ -1,4 +1,4 @@
.. Copyright 2013-2023 Lawrence Livermore National Security, LLC and other
.. Copyright 2013-2022 Lawrence Livermore National Security, LLC and other
Spack Project Developers. See the top-level COPYRIGHT file for details.
SPDX-License-Identifier: (Apache-2.0 OR MIT)
@@ -143,26 +143,6 @@ The OS that are currently supported are summarized in the table below:
* - Amazon Linux 2
- ``amazonlinux:2``
- ``spack/amazon-linux``
* - AlmaLinux 8
- ``almalinux:8``
- ``spack/almalinux8``
* - AlmaLinux 9
- ``almalinux:9``
- ``spack/almalinux9``
* - Rocky Linux 8
- ``rockylinux:8``
- ``spack/rockylinux8``
* - Rocky Linux 9
- ``rockylinux:9``
- ``spack/rockylinux9``
* - Fedora Linux 37
- ``fedora:37``
- ``spack/fedora37``
* - Fedora Linux 38
- ``fedora:38``
- ``spack/fedora38``
All the images are tagged with the corresponding release of Spack:
@@ -464,120 +444,6 @@ attribute:
The minimum version of Singularity required to build a SIF (Singularity Image Format)
image from the recipes generated by Spack is ``3.5.3``.
------------------------------
Extending the Jinja2 Templates
------------------------------
The Dockerfile and the Singularity definition file that Spack can generate are based on
a few Jinja2 templates that are rendered according to the environment being containerized.
Even though Spack allows a great deal of customization by just setting appropriate values for
the configuration options, sometimes that is not enough.
In those cases, a user can directly extend the template that Spack uses to render the image
to e.g. set additional environment variables or perform specific operations either before or
after a given stage of the build. Let's consider as an example the following structure:
.. code-block:: console
$ tree /opt/environment
/opt/environment
├── data
│ └── data.csv
├── spack.yaml
├── data
└── templates
└── container
└── CustomDockerfile
containing both the custom template extension and the environment manifest file. To use a custom
template, the environment must register the directory containing it, and declare its use under the
``container`` configuration:
.. code-block:: yaml
:emphasize-lines: 7-8,12
spack:
specs:
- hdf5~mpi
concretizer:
unify: true
config:
template_dirs:
- /opt/environment/templates
container:
format: docker
depfile: true
template: container/CustomDockerfile
The template extension can override two blocks, named ``build_stage`` and ``final_stage``, similarly to
the example below:
.. code-block::
:emphasize-lines: 3,8
{% extends "container/Dockerfile" %}
{% block build_stage %}
RUN echo "Start building"
{{ super() }}
{% endblock %}
{% block final_stage %}
{{ super() }}
COPY data /share/myapp/data
{% endblock %}
The recipe that gets generated contains the two extra instruction that we added in our template extension:
.. code-block:: Dockerfile
:emphasize-lines: 4,43
# Build stage with Spack pre-installed and ready to be used
FROM spack/ubuntu-jammy:latest as builder
RUN echo "Start building"
# What we want to install and how we want to install it
# is specified in a manifest file (spack.yaml)
RUN mkdir /opt/spack-environment \
&& (echo "spack:" \
&& echo " specs:" \
&& echo " - hdf5~mpi" \
&& echo " concretizer:" \
&& echo " unify: true" \
&& echo " config:" \
&& echo " template_dirs:" \
&& echo " - /tmp/environment/templates" \
&& echo " install_tree: /opt/software" \
&& echo " view: /opt/view") > /opt/spack-environment/spack.yaml
# Install the software, remove unnecessary deps
RUN cd /opt/spack-environment && spack env activate . && spack concretize && spack env depfile -o Makefile && make -j $(nproc) && spack gc -y
# Strip all the binaries
RUN find -L /opt/view/* -type f -exec readlink -f '{}' \; | \
xargs file -i | \
grep 'charset=binary' | \
grep 'x-executable\|x-archive\|x-sharedlib' | \
awk -F: '{print $1}' | xargs strip -s
# Modifications to the environment that are necessary to run
RUN cd /opt/spack-environment && \
spack env activate --sh -d . >> /etc/profile.d/z10_spack_environment.sh
# Bare OS image to run the installed executables
FROM ubuntu:22.04
COPY --from=builder /opt/spack-environment /opt/spack-environment
COPY --from=builder /opt/software /opt/software
COPY --from=builder /opt/._view /opt/._view
COPY --from=builder /opt/view /opt/view
COPY --from=builder /etc/profile.d/z10_spack_environment.sh /etc/profile.d/z10_spack_environment.sh
COPY data /share/myapp/data
ENTRYPOINT ["/bin/bash", "--rcfile", "/etc/profile", "-l", "-c", "$*", "--" ]
CMD [ "/bin/bash" ]
.. _container_config_options:
-----------------------
@@ -598,10 +464,6 @@ to customize the generation of container recipes:
- The format of the recipe
- ``docker`` or ``singularity``
- Yes
* - ``depfile``
- Whether to use a depfile for installation, or not
- True or False (default)
- No
* - ``images:os``
- Operating system used as a base for the image
- See :ref:`containers-supported-os`
@@ -636,7 +498,7 @@ to customize the generation of container recipes:
- No
* - ``os_packages:command``
- Tool used to manage system packages
- ``apt``, ``yum``, ``dnf``, ``dnf_epel``, ``zypper``, ``apk``, ``yum_amazon``
- ``apt``, ``yum``
- Only with custom base images
* - ``os_packages:update``
- Whether or not to update the list of available packages
@@ -650,6 +512,14 @@ to customize the generation of container recipes:
- System packages needed at run-time
- Valid packages for the current OS
- No
* - ``extra_instructions:build``
- Extra instructions (e.g. `RUN`, `COPY`, etc.) at the end of the ``build`` stage
- Anything understood by the current ``format``
- No
* - ``extra_instructions:final``
- Extra instructions (e.g. `RUN`, `COPY`, etc.) at the end of the ``final`` stage
- Anything understood by the current ``format``
- No
* - ``labels``
- Labels to tag the image
- Pairs of key-value strings

View File

@@ -1,4 +1,4 @@
.. Copyright 2013-2023 Lawrence Livermore National Security, LLC and other
.. Copyright 2013-2022 Lawrence Livermore National Security, LLC and other
Spack Project Developers. See the top-level COPYRIGHT file for details.
SPDX-License-Identifier: (Apache-2.0 OR MIT)
@@ -118,7 +118,7 @@ make another change, test that change, etc. We use `pytest
<http://pytest.org/>`_ as our tests framework, and these types of
arguments are just passed to the ``pytest`` command underneath. See `the
pytest docs
<https://doc.pytest.org/en/latest/how-to/usage.html#specifying-which-tests-to-run>`_
<http://doc.pytest.org/en/latest/usage.html#specifying-tests-selecting-tests>`_
for more details on test selection syntax.
``spack unit-test`` has a few special options that can help you
@@ -147,7 +147,7 @@ you want to know about. For example, to see just the tests in
You can also combine any of these options with a ``pytest`` keyword
search. See the `pytest usage docs
<https://doc.pytest.org/en/latest/how-to/usage.html#specifying-which-tests-to-run>`_
<https://docs.pytest.org/en/stable/usage.html#specifying-tests-selecting-tests>`_:
for more details on test selection syntax. For example, to see the names of all tests that have "spec"
or "concretize" somewhere in their names:

View File

@@ -1,4 +1,4 @@
.. Copyright 2013-2023 Lawrence Livermore National Security, LLC and other
.. Copyright 2013-2022 Lawrence Livermore National Security, LLC and other
Spack Project Developers. See the top-level COPYRIGHT file for details.
SPDX-License-Identifier: (Apache-2.0 OR MIT)
@@ -232,7 +232,7 @@ Spack Subcommands
Unit tests
^^^^^^^^^^
``spack.test``
:mod:`spack.test`
Implements Spack's test suite. Add a module and put its name in
the test suite in ``__init__.py`` to add more unit tests.
@@ -472,7 +472,7 @@ use my new hook as follows:
.. code-block:: python
def post_log_write(message, level):
"""Do something custom with the message and level every time we write
"""Do something custom with the messsage and level every time we write
to the log
"""
print('running post_log_write!')

View File

@@ -1,4 +1,4 @@
.. Copyright 2013-2023 Lawrence Livermore National Security, LLC and other
.. Copyright 2013-2022 Lawrence Livermore National Security, LLC and other
Spack Project Developers. See the top-level COPYRIGHT file for details.
SPDX-License-Identifier: (Apache-2.0 OR MIT)
@@ -58,9 +58,9 @@ Using Environments
Here we follow a typical use case of creating, concretizing,
installing and loading an environment.
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
Creating a managed Environment
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
^^^^^^^^^^^^^^^^^^^^^^^^^^^^
Creating a named Environment
^^^^^^^^^^^^^^^^^^^^^^^^^^^^
An environment is created by:
@@ -72,8 +72,7 @@ Spack then creates the directory ``var/spack/environments/myenv``.
.. note::
All managed environments by default are stored in the ``var/spack/environments`` folder.
This location can be changed by setting the ``environments_root`` variable in ``config.yaml``.
All named environments are stored in the ``var/spack/environments`` folder.
In the ``var/spack/environments/myenv`` directory, Spack creates the
file ``spack.yaml`` and the hidden directory ``.spack-env``.
@@ -94,9 +93,9 @@ an Environment, the ``.spack-env`` directory also contains:
* ``logs/``: A directory containing the build logs for the packages
in this Environment.
Spack Environments can also be created from either a manifest file
(usually but not necessarily named, ``spack.yaml``) or a lockfile.
To create an Environment from a manifest:
Spack Environments can also be created from either a ``spack.yaml``
manifest or a ``spack.lock`` lockfile. To create an Environment from a
``spack.yaml`` manifest:
.. code-block:: console
@@ -174,7 +173,7 @@ Anonymous specs can be created in place using the command:
$ spack env create -d .
In this case Spack simply creates a ``spack.yaml`` file in the requested
In this case Spack simply creates a spack.yaml file in the requested
directory.
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
@@ -347,7 +346,7 @@ the Environment and then install the concretized specs.
(see :ref:`build-jobs`). To speed up environment builds further, independent
packages can be installed in parallel by launching more Spack instances. For
example, the following will build at most four packages in parallel using
three background jobs:
three background jobs:
.. code-block:: console
@@ -395,7 +394,7 @@ version (and other constraints) passed as the spec argument to the
For packages with ``git`` attributes, git branches, tags, and commits can
also be used as valid concrete versions (see :ref:`version-specifier`).
This means that for a package ``foo``, ``spack develop foo@git.main`` will clone
This means that for a package ``foo``, ``spack develop foo@git.main`` will clone
the ``main`` branch of the package, and ``spack install`` will install from
that git clone if ``foo`` is in the environment.
Further development on ``foo`` can be tested by reinstalling the environment,
@@ -589,11 +588,10 @@ user support groups providing a large software stack for their HPC center.
.. admonition:: Re-concretization of user specs
The ``spack concretize`` command without additional arguments will *not* change any
previously concretized specs. This may prevent it from finding a solution when using
``unify: true``, and it may prevent it from finding a minimal solution when using
``unify: when_possible``. You can force Spack to ignore the existing concrete environment
with ``spack concretize -f``.
When using *unified* concretization (when possible), the entire set of specs will be
re-concretized after any addition of new user specs, to ensure that
the environment remains consistent / minimal. When instead unified concretization is
disabled, only the new specs will be concretized after any addition.
^^^^^^^^^^^^^
Spec Matrices
@@ -916,9 +914,9 @@ function, as shown in the example below:
.. code-block:: yaml
projections:
zlib: "{name}-{version}"
^mpi: "{name}-{version}/{^mpi.name}-{^mpi.version}-{compiler.name}-{compiler.version}"
all: "{name}-{version}/{compiler.name}-{compiler.version}"
zlib: {name}-{version}
^mpi: {name}-{version}/{^mpi.name}-{^mpi.version}-{compiler.name}-{compiler.version}
all: {name}-{version}/{compiler.name}-{compiler.version}
The entries in the projections configuration file must all be either
specs or the keyword ``all``. For each spec, the projection used will
@@ -1041,7 +1039,7 @@ gets installed and is available for use in the ``env`` target.
$(SPACK) -e . concretize -f
env.mk: spack.lock
$(SPACK) -e . env depfile -o $@ --make-prefix spack
$(SPACK) -e . env depfile -o $@ --make-target-prefix spack
env: spack/env
$(info Environment installed!)
@@ -1064,9 +1062,9 @@ the include is conditional.
.. note::
When including generated ``Makefile``\s, it is important to use
the ``--make-prefix`` flag and use the non-phony target
``<prefix>/env`` as prerequisite, instead of the phony target
``<prefix>/all``.
the ``--make-target-prefix`` flag and use the non-phony target
``<target-prefix>/env`` as prerequisite, instead of the phony target
``<target-prefix>/all``.
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
Building a subset of the environment
@@ -1091,52 +1089,4 @@ output (``spack install --verbose``) while its dependencies are installed silent
$ make -j16 install-deps/python-3.11.0-<hash> SPACK_INSTALL_FLAGS=--show-log-on-error
# Install the root spec with verbose output.
$ make -j16 install/python-3.11.0-<hash> SPACK_INSTALL_FLAGS=--verbose
^^^^^^^^^^^^^^^^^^^^^^^^^
Adding post-install hooks
^^^^^^^^^^^^^^^^^^^^^^^^^
Another advanced use-case of generated ``Makefile``\s is running a post-install
command for each package. These "hooks" could be anything from printing a
post-install message, running tests, or pushing just-built binaries to a buildcache.
This can be accomplished through the generated ``[<prefix>/]SPACK_PACKAGE_IDS``
variable. Assuming we have an active and concrete environment, we generate the
associated ``Makefile`` with a prefix ``example``:
.. code:: console
$ spack env depfile -o env.mk --make-prefix example
And we now include it in a different ``Makefile``, in which we create a target
``example/push/%`` with ``%`` referring to a package identifier. This target
depends on the particular package installation. In this target we automatically
have the target-specific ``HASH`` and ``SPEC`` variables at our disposal. They
are respectively the spec hash (excluding leading ``/``), and a human-readable spec.
Finally, we have an entrypoint target ``push`` that will update the buildcache
index once every package is pushed. Note how this target uses the generated
``example/SPACK_PACKAGE_IDS`` variable to define its prerequisites.
.. code:: Makefile
SPACK ?= spack
BUILDCACHE_DIR = $(CURDIR)/tarballs
.PHONY: all
all: push
include env.mk
example/push/%: example/install/%
@mkdir -p $(dir $@)
$(info About to push $(SPEC) to a buildcache)
$(SPACK) -e . buildcache push --allow-root --only=package $(BUILDCACHE_DIR) /$(HASH)
@touch $@
push: $(addprefix example/push/,$(example/SPACK_PACKAGE_IDS))
$(info Updating the buildcache index)
$(SPACK) -e . buildcache update-index $(BUILDCACHE_DIR)
$(info Done!)
@touch $@
$ make -j16 install/python-3.11.0-<hash> SPACK_INSTALL_FLAGS=--verbose

View File

@@ -1,4 +1,4 @@
.. Copyright 2013-2023 Lawrence Livermore National Security, LLC and other
.. Copyright 2013-2022 Lawrence Livermore National Security, LLC and other
Spack Project Developers. See the top-level COPYRIGHT file for details.
SPDX-License-Identifier: (Apache-2.0 OR MIT)

View File

@@ -1,4 +1,4 @@
.. Copyright 2013-2023 Lawrence Livermore National Security, LLC and other
.. Copyright 2013-2022 Lawrence Livermore National Security, LLC and other
Spack Project Developers. See the top-level COPYRIGHT file for details.
SPDX-License-Identifier: (Apache-2.0 OR MIT)
@@ -116,7 +116,7 @@ creates a simple python file:
# FIXME: Add a list of GitHub accounts to
# notify when the package is updated.
# maintainers("github_user1", "github_user2")
# maintainers = ["github_user1", "github_user2"]
version("0.8.13", sha256="591a9b4ec81c1f2042a97aa60564e0cb79d041c52faa7416acb38bc95bd2c76d")

View File

@@ -1,4 +1,4 @@
.. Copyright 2013-2023 Lawrence Livermore National Security, LLC and other
.. Copyright 2013-2022 Lawrence Livermore National Security, LLC and other
Spack Project Developers. See the top-level COPYRIGHT file for details.
SPDX-License-Identifier: (Apache-2.0 OR MIT)
@@ -21,7 +21,7 @@ be present on the machine where Spack is run:
:header-rows: 1
These requirements can be easily installed on most modern Linux systems;
on macOS, the Command Line Tools package is required, and a full XCode suite
on macOS, the Command Line Tools package is required, and a full XCode suite
may be necessary for some packages such as Qt and apple-gl. Spack is designed
to run on HPC platforms like Cray. Not all packages should be expected
to work on all platforms.
@@ -41,9 +41,12 @@ A build matrix showing which packages are working on which systems is shown belo
.. code-block:: console
dnf install epel-release
dnf group install "Development Tools"
dnf install curl findutils gcc-gfortran gnupg2 hostname iproute redhat-lsb-core python3 python3-pip python3-setuptools unzip python3-boto3
yum update -y
yum install -y epel-release
yum update -y
yum --enablerepo epel groupinstall -y "Development Tools"
yum --enablerepo epel install -y curl findutils gcc-c++ gcc gcc-gfortran git gnupg2 hostname iproute redhat-lsb-core make patch python3 python3-pip python3-setuptools unzip
python3 -m pip install boto3
.. tab-item:: macOS Brew
@@ -317,7 +320,7 @@ installed, but you know that new compilers have been added to your
.. code-block:: console
$ module load gcc/4.9.0
$ module load gcc-4.9.0
$ spack compiler find
==> Added 1 new compiler to ~/.spack/linux/compilers.yaml
gcc@4.9.0
@@ -365,8 +368,7 @@ Manual compiler configuration
If auto-detection fails, you can manually configure a compiler by
editing your ``~/.spack/<platform>/compilers.yaml`` file. You can do this by running
``spack config edit compilers``, which will open the file in
:ref:`your favorite editor <controlling-the-editor>`.
``spack config edit compilers``, which will open the file in your ``$EDITOR``.
Each compiler configuration in the file looks like this:
@@ -1504,7 +1506,7 @@ Spack On Windows
Windows support for Spack is currently under development. While this work is still in an early stage,
it is currently possible to set up Spack and perform a few operations on Windows. This section will guide
you through the steps needed to install Spack and start running it on a fresh Windows machine.
you through the steps needed to install Spack and start running it on a fresh Windows machine.
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
Step 1: Install prerequisites
@@ -1514,7 +1516,7 @@ To use Spack on Windows, you will need the following packages:
Required:
* Microsoft Visual Studio
* Python
* Python
* Git
Optional:
@@ -1545,8 +1547,8 @@ Intel Fortran
"""""""""""""
For Fortran-based packages on Windows, we strongly recommend Intel's oneAPI Fortran compilers.
The suite is free to download from Intel's website, located at
https://software.intel.com/content/www/us/en/develop/tools/oneapi/components/fortran-compiler.html.
The suite is free to download from Intel's website, located at
https://software.intel.com/content/www/us/en/develop/tools/oneapi/components/fortran-compiler.html#gs.70t5tw.
The executable of choice for Spack will be Intel's Beta Compiler, ifx, which supports the classic
compiler's (ifort's) frontend and runtime libraries by using LLVM.
@@ -1595,8 +1597,8 @@ in a Windows CMD prompt.
.. note::
If you chose to install Spack into a directory on Windows that is set up to require Administrative
Privileges, Spack will require elevated privileges to run.
Administrative Privileges can be denoted either by default such as
Privleges, Spack will require elevated privleges to run.
Administrative Privleges can be denoted either by default such as
``C:\Program Files``, or aministrator applied administrative restrictions
on a directory that spack installs files to such as ``C:\Users``
@@ -1692,21 +1694,35 @@ Spack console via:
spack install cpuinfo
If in the previous step, you did not have CMake or Ninja installed, running the command above should bootstrap both packages
If in the previous step, you did not have CMake or Ninja installed, running the command above should boostrap both packages
"""""""""""""""""""""""""""
Windows Compatible Packages
"""""""""""""""""""""""""""
Not all spack packages currently have Windows support. Some are inherently incompatible with the
platform, and others simply have yet to be ported. To view the current set of packages with Windows
support, the list command should be used via `spack list -t windows`. If there's a package you'd like
to install on Windows but is not in that list, feel free to reach out to request the port or contribute
the port yourself.
Many Spack packages are not currently compatible with Windows, due to Unix
dependencies or incompatible build tools like autoconf. Here are several
packages known to work on Windows:
* abseil-cpp
* bzip2
* clingo
* cpuinfo
* cmake
* hdf5
* glm
* nasm
* netlib-lapack (requires Intel Fortran)
* ninja
* openssl
* perl
* python
* ruby
* wrf
* zlib
.. note::
This is by no means a comprehensive list, some packages may have ports that were not tagged
while others may just work out of the box on Windows and have not been tagged as such.
This is by no means a comprehensive list
^^^^^^^^^^^^^^
For developers
@@ -1718,4 +1734,3 @@ Instructions for creating the installer are at
https://github.com/spack/spack/blob/develop/lib/spack/spack/cmd/installer/README.md
Alternatively a pre-built copy of the Windows installer is available as an artifact of Spack's Windows CI
available at each run of the CI on develop or any PR.

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@@ -1,113 +0,0 @@
.. Copyright 2013-2023 Lawrence Livermore National Security, LLC and other
Spack Project Developers. See the top-level COPYRIGHT file for details.
SPDX-License-Identifier: (Apache-2.0 OR MIT)
==========================
Using External GPU Support
==========================
Many packages come with a ``+cuda`` or ``+rocm`` variant. With no added
configuration Spack will download and install the needed components.
It may be preferable to use existing system support: the following sections
help with using a system installation of GPU libraries.
-----------------------------------
Using an External ROCm Installation
-----------------------------------
Spack breaks down ROCm into many separate component packages. The following
is an example ``packages.yaml`` that organizes a consistent set of ROCm
components for use by dependent packages:
.. code-block:: yaml
packages:
all:
compiler: [rocmcc@=5.3.0]
variants: amdgpu_target=gfx90a
hip:
buildable: false
externals:
- spec: hip@5.3.0
prefix: /opt/rocm-5.3.0/hip
hsa-rocr-dev:
buildable: false
externals:
- spec: hsa-rocr-dev@5.3.0
prefix: /opt/rocm-5.3.0/
llvm-amdgpu:
buildable: false
externals:
- spec: llvm-amdgpu@5.3.0
prefix: /opt/rocm-5.3.0/llvm/
comgr:
buildable: false
externals:
- spec: comgr@5.3.0
prefix: /opt/rocm-5.3.0/
hipsparse:
buildable: false
externals:
- spec: hipsparse@5.3.0
prefix: /opt/rocm-5.3.0/
hipblas:
buildable: false
externals:
- spec: hipblas@5.3.0
prefix: /opt/rocm-5.3.0/
rocblas:
buildable: false
externals:
- spec: rocblas@5.3.0
prefix: /opt/rocm-5.3.0/
rocprim:
buildable: false
externals:
- spec: rocprim@5.3.0
prefix: /opt/rocm-5.3.0/rocprim/
This is in combination with the following compiler definition:
.. code-block:: yaml
compilers:
- compiler:
spec: rocmcc@=5.3.0
paths:
cc: /opt/rocm-5.3.0/bin/amdclang
cxx: /opt/rocm-5.3.0/bin/amdclang++
f77: null
fc: /opt/rocm-5.3.0/bin/amdflang
operating_system: rhel8
target: x86_64
This includes the following considerations:
- Each of the listed externals specifies ``buildable: false`` to force Spack
to use only the externals we defined.
- ``spack external find`` can automatically locate some of the ``hip``/``rocm``
packages, but not all of them, and furthermore not in a manner that
guarantees a complementary set if multiple ROCm installations are available.
- The ``prefix`` is the same for several components, but note that others
require listing one of the subdirectories as a prefix.
-----------------------------------
Using an External CUDA Installation
-----------------------------------
CUDA is split into fewer components and is simpler to specify:
.. code-block:: yaml
packages:
all:
variants:
- cuda_arch=70
cuda:
buildable: false
externals:
- spec: cuda@11.0.2
prefix: /opt/cuda/cuda-11.0.2/
where ``/opt/cuda/cuda-11.0.2/lib/`` contains ``libcudart.so``.

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@@ -1,4 +1,4 @@
.. Copyright 2013-2023 Lawrence Livermore National Security, LLC and other
.. Copyright 2013-2022 Lawrence Livermore National Security, LLC and other
Spack Project Developers. See the top-level COPYRIGHT file for details.
SPDX-License-Identifier: (Apache-2.0 OR MIT)
@@ -76,8 +76,6 @@ or refer to the full manual below.
chain
extensions
pipelines
signing
gpu_configuration
.. toctree::
:maxdepth: 2

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@@ -1,4 +1,4 @@
.. Copyright 2013-2023 Lawrence Livermore National Security, LLC and other
.. Copyright 2013-2022 Lawrence Livermore National Security, LLC and other
Spack Project Developers. See the top-level COPYRIGHT file for details.
SPDX-License-Identifier: (Apache-2.0 OR MIT)
@@ -163,7 +163,7 @@ your site.
Mirror environment
^^^^^^^^^^^^^^^^^^
To create a mirror of all packages required by a concrete environment, activate the environment and call ``spack mirror create -a``.
To create a mirror of all packages required by a concerte environment, activate the environment and call ``spack mirror create -a``.
This is especially useful to create a mirror of an environment concretized on another machine.
.. code-block:: console

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@@ -1,4 +1,4 @@
.. Copyright 2013-2023 Lawrence Livermore National Security, LLC and other
.. Copyright 2013-2022 Lawrence Livermore National Security, LLC and other
Spack Project Developers. See the top-level COPYRIGHT file for details.
SPDX-License-Identifier: (Apache-2.0 OR MIT)
@@ -13,7 +13,7 @@ The use of module systems to manage user environment in a controlled way
is a common practice at HPC centers that is often embraced also by
individual programmers on their development machines. To support this
common practice Spack integrates with `Environment Modules
<http://modules.sourceforge.net/>`_ and `Lmod
<http://modules.sourceforge.net/>`_ and `LMod
<http://lmod.readthedocs.io/en/latest/>`_ by providing post-install hooks
that generate module files and commands to manipulate them.
@@ -26,8 +26,8 @@ Using module files via Spack
----------------------------
If you have installed a supported module system you should be able to
run ``module avail`` to see what module
files have been installed. Here is sample output of those programs,
run either ``module avail`` or ``use -l spack`` to see what module
files have been installed. Here is sample output of those programs,
showing lots of installed packages:
.. code-block:: console
@@ -35,27 +35,32 @@ showing lots of installed packages:
$ module avail
--------------------------------------------------------------- ~/spack/share/spack/modules/linux-ubuntu14-x86_64 ---------------------------------------------------------------
autoconf/2.69-gcc-4.8-qextxkq hwloc/1.11.6-gcc-6.3.0-akcisez m4/1.4.18-gcc-4.8-ev2znoc openblas/0.2.19-gcc-6.3.0-dhkmed6 py-setuptools/34.2.0-gcc-6.3.0-fadur4s
automake/1.15-gcc-4.8-maqvukj isl/0.18-gcc-4.8-afi6taq m4/1.4.18-gcc-6.3.0-uppywnz openmpi/2.1.0-gcc-6.3.0-go2s4z5 py-six/1.10.0-gcc-6.3.0-p4dhkaw
binutils/2.28-gcc-4.8-5s7c6rs libiconv/1.15-gcc-4.8-at46wg3 mawk/1.3.4-gcc-4.8-acjez57 openssl/1.0.2k-gcc-4.8-dkls5tk python/2.7.13-gcc-6.3.0-tyehea7
bison/3.0.4-gcc-4.8-ek4luo5 libpciaccess/0.13.4-gcc-6.3.0-gmufnvh mawk/1.3.4-gcc-6.3.0-ostdoms openssl/1.0.2k-gcc-6.3.0-gxgr5or readline/7.0-gcc-4.8-xhufqhn
bzip2/1.0.6-gcc-4.8-iffrxzn libsigsegv/2.11-gcc-4.8-pp2cvte mpc/1.0.3-gcc-4.8-g5mztc5 pcre/8.40-gcc-4.8-r5pbrxb readline/7.0-gcc-6.3.0-zzcyicg
bzip2/1.0.6-gcc-6.3.0-bequudr libsigsegv/2.11-gcc-6.3.0-7enifnh mpfr/3.1.5-gcc-4.8-o7xm7az perl/5.24.1-gcc-4.8-dg5j65u sqlite/3.8.5-gcc-6.3.0-6zoruzj
cmake/3.7.2-gcc-6.3.0-fowuuby libtool/2.4.6-gcc-4.8-7a523za mpich/3.2-gcc-6.3.0-dmvd3aw perl/5.24.1-gcc-6.3.0-6uzkpt6 tar/1.29-gcc-4.8-wse2ass
curl/7.53.1-gcc-4.8-3fz46n6 libtool/2.4.6-gcc-6.3.0-n7zmbzt ncurses/6.0-gcc-4.8-dcpe7ia pkg-config/0.29.2-gcc-4.8-ib33t75 tcl/8.6.6-gcc-4.8-tfxzqbr
expat/2.2.0-gcc-4.8-mrv6bd4 libxml2/2.9.4-gcc-4.8-ryzxnsu ncurses/6.0-gcc-6.3.0-ucbhcdy pkg-config/0.29.2-gcc-6.3.0-jpgubk3 util-macros/1.19.1-gcc-6.3.0-xorz2x2
flex/2.6.3-gcc-4.8-yf345oo libxml2/2.9.4-gcc-6.3.0-rltzsdh netlib-lapack/3.6.1-gcc-6.3.0-js33dog py-appdirs/1.4.0-gcc-6.3.0-jxawmw7 xz/5.2.3-gcc-4.8-mew4log
gcc/6.3.0-gcc-4.8-24puqve lmod/7.4.1-gcc-4.8-je4srhr netlib-scalapack/2.0.2-gcc-6.3.0-5aidk4l py-numpy/1.12.0-gcc-6.3.0-oemmoeu xz/5.2.3-gcc-6.3.0-3vqeuvb
gettext/0.19.8.1-gcc-4.8-yymghlh lua/5.3.4-gcc-4.8-im75yaz netlib-scalapack/2.0.2-gcc-6.3.0-hjsemcn py-packaging/16.8-gcc-6.3.0-i2n3dtl zip/3.0-gcc-4.8-rwar22d
gmp/6.1.2-gcc-4.8-5ub2wu5 lua-luafilesystem/1_6_3-gcc-4.8-wkey3nl netlib-scalapack/2.0.2-gcc-6.3.0-jva724b py-pyparsing/2.1.10-gcc-6.3.0-tbo6gmw zlib/1.2.11-gcc-4.8-pgxsxv7
help2man/1.47.4-gcc-4.8-kcnqmau lua-luaposix/33.4.0-gcc-4.8-mdod2ry netlib-scalapack/2.0.2-gcc-6.3.0-rgqfr6d py-scipy/0.19.0-gcc-6.3.0-kr7nat4 zlib/1.2.11-gcc-6.3.0-7cqp6cj
autoconf-2.69-gcc-4.8-qextxkq hwloc-1.11.6-gcc-6.3.0-akcisez m4-1.4.18-gcc-4.8-ev2znoc openblas-0.2.19-gcc-6.3.0-dhkmed6 py-setuptools-34.2.0-gcc-6.3.0-fadur4s
automake-1.15-gcc-4.8-maqvukj isl-0.18-gcc-4.8-afi6taq m4-1.4.18-gcc-6.3.0-uppywnz openmpi-2.1.0-gcc-6.3.0-go2s4z5 py-six-1.10.0-gcc-6.3.0-p4dhkaw
binutils-2.28-gcc-4.8-5s7c6rs libiconv-1.15-gcc-4.8-at46wg3 mawk-1.3.4-gcc-4.8-acjez57 openssl-1.0.2k-gcc-4.8-dkls5tk python-2.7.13-gcc-6.3.0-tyehea7
bison-3.0.4-gcc-4.8-ek4luo5 libpciaccess-0.13.4-gcc-6.3.0-gmufnvh mawk-1.3.4-gcc-6.3.0-ostdoms openssl-1.0.2k-gcc-6.3.0-gxgr5or readline-7.0-gcc-4.8-xhufqhn
bzip2-1.0.6-gcc-4.8-iffrxzn libsigsegv-2.11-gcc-4.8-pp2cvte mpc-1.0.3-gcc-4.8-g5mztc5 pcre-8.40-gcc-4.8-r5pbrxb readline-7.0-gcc-6.3.0-zzcyicg
bzip2-1.0.6-gcc-6.3.0-bequudr libsigsegv-2.11-gcc-6.3.0-7enifnh mpfr-3.1.5-gcc-4.8-o7xm7az perl-5.24.1-gcc-4.8-dg5j65u sqlite-3.8.5-gcc-6.3.0-6zoruzj
cmake-3.7.2-gcc-6.3.0-fowuuby libtool-2.4.6-gcc-4.8-7a523za mpich-3.2-gcc-6.3.0-dmvd3aw perl-5.24.1-gcc-6.3.0-6uzkpt6 tar-1.29-gcc-4.8-wse2ass
curl-7.53.1-gcc-4.8-3fz46n6 libtool-2.4.6-gcc-6.3.0-n7zmbzt ncurses-6.0-gcc-4.8-dcpe7ia pkg-config-0.29.2-gcc-4.8-ib33t75 tcl-8.6.6-gcc-4.8-tfxzqbr
expat-2.2.0-gcc-4.8-mrv6bd4 libxml2-2.9.4-gcc-4.8-ryzxnsu ncurses-6.0-gcc-6.3.0-ucbhcdy pkg-config-0.29.2-gcc-6.3.0-jpgubk3 util-macros-1.19.1-gcc-6.3.0-xorz2x2
flex-2.6.3-gcc-4.8-yf345oo libxml2-2.9.4-gcc-6.3.0-rltzsdh netlib-lapack-3.6.1-gcc-6.3.0-js33dog py-appdirs-1.4.0-gcc-6.3.0-jxawmw7 xz-5.2.3-gcc-4.8-mew4log
gcc-6.3.0-gcc-4.8-24puqve lmod-7.4.1-gcc-4.8-je4srhr netlib-scalapack-2.0.2-gcc-6.3.0-5aidk4l py-numpy-1.12.0-gcc-6.3.0-oemmoeu xz-5.2.3-gcc-6.3.0-3vqeuvb
gettext-0.19.8.1-gcc-4.8-yymghlh lua-5.3.4-gcc-4.8-im75yaz netlib-scalapack-2.0.2-gcc-6.3.0-hjsemcn py-packaging-16.8-gcc-6.3.0-i2n3dtl zip-3.0-gcc-4.8-rwar22d
gmp-6.1.2-gcc-4.8-5ub2wu5 lua-luafilesystem-1_6_3-gcc-4.8-wkey3nl netlib-scalapack-2.0.2-gcc-6.3.0-jva724b py-pyparsing-2.1.10-gcc-6.3.0-tbo6gmw zlib-1.2.11-gcc-4.8-pgxsxv7
help2man-1.47.4-gcc-4.8-kcnqmau lua-luaposix-33.4.0-gcc-4.8-mdod2ry netlib-scalapack-2.0.2-gcc-6.3.0-rgqfr6d py-scipy-0.19.0-gcc-6.3.0-kr7nat4 zlib-1.2.11-gcc-6.3.0-7cqp6cj
The names should look familiar, as they resemble the output from ``spack find``.
For example, you could type the following command to load the ``cmake`` module:
You *can* use the modules here directly. For example, you could type either of these commands
to load the ``cmake`` module:
.. code-block:: console
$ module load cmake/3.7.2-gcc-6.3.0-fowuuby
$ use cmake-3.7.2-gcc-6.3.0-fowuuby
.. code-block:: console
$ module load cmake-3.7.2-gcc-6.3.0-fowuuby
Neither of these is particularly pretty, easy to remember, or easy to
type. Luckily, Spack offers many facilities for customizing the module
@@ -88,9 +93,9 @@ the different file formats that can be generated by Spack:
+-----------------------------+--------------------+-------------------------------+----------------------------------------------+----------------------+
| | **Hook name** | **Default root directory** | **Default template file** | **Compatible tools** |
+=============================+====================+===============================+==============================================+======================+
| **Tcl - Non-Hierarchical** | ``tcl`` | share/spack/modules | share/spack/templates/modules/modulefile.tcl | Env. Modules/Lmod |
| **TCL - Non-Hierarchical** | ``tcl`` | share/spack/modules | share/spack/templates/modules/modulefile.tcl | Env. Modules/LMod |
+-----------------------------+--------------------+-------------------------------+----------------------------------------------+----------------------+
| **Lua - Hierarchical** | ``lmod`` | share/spack/lmod | share/spack/templates/modules/modulefile.lua | Lmod |
| **Lua - Hierarchical** | ``lmod`` | share/spack/lmod | share/spack/templates/modules/modulefile.lua | LMod |
+-----------------------------+--------------------+-------------------------------+----------------------------------------------+----------------------+
@@ -275,12 +280,10 @@ of the installed software. For instance, in the snippet below:
set:
BAR: 'bar'
# This anonymous spec selects any package that
# depends on mpi. The double colon at the
# depends on openmpi. The double colon at the
# end clears the set of rules that matched so far.
^mpi::
^openmpi::
environment:
prepend_path:
PATH: '{^mpi.prefix}/bin'
set:
BAR: 'baz'
# Selects any zlib package
@@ -295,9 +298,7 @@ of the installed software. For instance, in the snippet below:
- FOOBAR
you are instructing Spack to set the environment variable ``BAR=bar`` for every module,
unless the associated spec satisfies the abstract dependency ``^mpi`` in which case
``BAR=baz``, and the directory containing the respective MPI executables is prepended
to the ``PATH`` variable.
unless the associated spec satisfies ``^openmpi`` in which case ``BAR=baz``.
In addition in any spec that satisfies ``zlib`` the value ``foo`` will be
prepended to ``LD_LIBRARY_PATH`` and in any spec that satisfies ``zlib%gcc@4.8``
the variable ``FOOBAR`` will be unset.
@@ -395,41 +396,39 @@ name and version for all packages that depend on mpi.
When specifying module names by projection for Lmod modules, we
recommend NOT including names of dependencies (e.g., MPI, compilers)
that are already in the Lmod hierarchy.
that are already in the LMod hierarchy.
.. note::
Tcl and Lua modules also allow for explicit conflicts between modulefiles.
TCL modules
TCL modules also allow for explicit conflicts between modulefiles.
.. code-block:: yaml
.. code-block:: yaml
modules:
default:
enable:
- tcl
tcl:
projections:
all: '{name}/{version}-{compiler.name}-{compiler.version}'
all:
conflict:
- '{name}'
- 'intel/14.0.1'
modules:
default:
enable:
- tcl
tcl:
projections:
all: '{name}/{version}-{compiler.name}-{compiler.version}'
all:
conflict:
- '{name}'
- 'intel/14.0.1'
will create module files that will conflict with ``intel/14.0.1`` and with the
base directory of the same module, effectively preventing the possibility to
load two or more versions of the same software at the same time. The tokens
that are available for use in this directive are the same understood by the
:meth:`~spack.spec.Spec.format` method.
For Lmod and Environment Modules versions prior 4.2, it is important to
express the conflict on both modulefiles conflicting with each other.
will create module files that will conflict with ``intel/14.0.1`` and with the
base directory of the same module, effectively preventing the possibility to
load two or more versions of the same software at the same time. The tokens
that are available for use in this directive are the same understood by
the :meth:`~spack.spec.Spec.format` method.
.. note::
Lmod hierarchical module files
LMod hierarchical module files
When ``lmod`` is activated Spack will generate a set of hierarchical lua module
files that are understood by Lmod. The hierarchy will always contain the
files that are understood by LMod. The hierarchy will always contain the
two layers ``Core`` / ``Compiler`` but can be further extended to
any of the virtual dependencies present in Spack. A case that could be useful in
practice is for instance:
@@ -451,7 +450,7 @@ that are already in the Lmod hierarchy.
that will generate a hierarchy in which the ``lapack`` and ``mpi`` layer can be switched
independently. This allows a site to build the same libraries or applications against different
implementations of ``mpi`` and ``lapack``, and let Lmod switch safely from one to the
implementations of ``mpi`` and ``lapack``, and let LMod switch safely from one to the
other.
All packages built with a compiler in ``core_compilers`` and all
@@ -461,12 +460,12 @@ that are already in the Lmod hierarchy.
.. warning::
Consistency of Core packages
The user is responsible for maintining consistency among core packages, as ``core_specs``
bypasses the hierarchy that allows Lmod to safely switch between coherent software stacks.
bypasses the hierarchy that allows LMod to safely switch between coherent software stacks.
.. warning::
Deep hierarchies and ``lmod spider``
For hierarchies that are deeper than three layers ``lmod spider`` may have some issues.
See `this discussion on the Lmod project <https://github.com/TACC/Lmod/issues/114>`_.
See `this discussion on the LMod project <https://github.com/TACC/Lmod/issues/114>`_.
""""""""""""""""""""""
Select default modules
@@ -535,7 +534,7 @@ installed to ``/spack/prefix/foo``, if ``foo`` installs executables to
update ``MANPATH``.
The default list of environment variables in this config section
includes ``PATH``, ``MANPATH``, ``ACLOCAL_PATH``, ``PKG_CONFIG_PATH``
inludes ``PATH``, ``MANPATH``, ``ACLOCAL_PATH``, ``PKG_CONFIG_PATH``
and ``CMAKE_PREFIX_PATH``, as well as ``DYLD_FALLBACK_LIBRARY_PATH``
on macOS. On Linux however, the corresponding ``LD_LIBRARY_PATH``
variable is *not* set, because it affects the behavior of
@@ -635,9 +634,8 @@ by its dependency; when the dependency is autoloaded, the executable will be in
PATH. Similarly for scripting languages such as Python, packages and their dependencies
have to be loaded together.
Autoloading is enabled by default for Lmod and Environment Modules. The former
has builtin support for through the ``depends_on`` function. The latter uses
``module load`` statement to load and track dependencies.
Autoloading is enabled by default for LMod, as it has great builtin support for through
the ``depends_on`` function. For Environment Modules it is disabled by default.
Autoloading can also be enabled conditionally:
@@ -657,14 +655,12 @@ The allowed values for the ``autoload`` statement are either ``none``,
``direct`` or ``all``.
.. note::
Tcl prerequisites
TCL prerequisites
In the ``tcl`` section of the configuration file it is possible to use
the ``prerequisites`` directive that accepts the same values as
``autoload``. It will produce module files that have a ``prereq``
statement, which autoloads dependencies on Environment Modules when its
``auto_handling`` configuration option is enabled. If Environment Modules
is installed with Spack, ``auto_handling`` is enabled by default starting
version 4.2. Otherwise it is enabled by default since version 5.0.
statement, which can be used to autoload dependencies in some versions
of Environment Modules.
------------------------
Maintaining Module Files
@@ -785,35 +781,35 @@ cut-and-pasted into a shell script. For example:
$ spack module tcl loads --dependencies py-numpy git
# bzip2@1.0.6%gcc@4.9.3=linux-x86_64
module load bzip2/1.0.6-gcc-4.9.3-ktnrhkrmbbtlvnagfatrarzjojmkvzsx
module load bzip2-1.0.6-gcc-4.9.3-ktnrhkrmbbtlvnagfatrarzjojmkvzsx
# ncurses@6.0%gcc@4.9.3=linux-x86_64
module load ncurses/6.0-gcc-4.9.3-kaazyneh3bjkfnalunchyqtygoe2mncv
module load ncurses-6.0-gcc-4.9.3-kaazyneh3bjkfnalunchyqtygoe2mncv
# zlib@1.2.8%gcc@4.9.3=linux-x86_64
module load zlib/1.2.8-gcc-4.9.3-v3ufwaahjnviyvgjcelo36nywx2ufj7z
module load zlib-1.2.8-gcc-4.9.3-v3ufwaahjnviyvgjcelo36nywx2ufj7z
# sqlite@3.8.5%gcc@4.9.3=linux-x86_64
module load sqlite/3.8.5-gcc-4.9.3-a3eediswgd5f3rmto7g3szoew5nhehbr
module load sqlite-3.8.5-gcc-4.9.3-a3eediswgd5f3rmto7g3szoew5nhehbr
# readline@6.3%gcc@4.9.3=linux-x86_64
module load readline/6.3-gcc-4.9.3-se6r3lsycrwxyhreg4lqirp6xixxejh3
module load readline-6.3-gcc-4.9.3-se6r3lsycrwxyhreg4lqirp6xixxejh3
# python@3.5.1%gcc@4.9.3=linux-x86_64
module load python/3.5.1-gcc-4.9.3-5q5rsrtjld4u6jiicuvtnx52m7tfhegi
module load python-3.5.1-gcc-4.9.3-5q5rsrtjld4u6jiicuvtnx52m7tfhegi
# py-setuptools@20.5%gcc@4.9.3=linux-x86_64
module load py-setuptools/20.5-gcc-4.9.3-4qr2suj6p6glepnedmwhl4f62x64wxw2
module load py-setuptools-20.5-gcc-4.9.3-4qr2suj6p6glepnedmwhl4f62x64wxw2
# py-nose@1.3.7%gcc@4.9.3=linux-x86_64
module load py-nose/1.3.7-gcc-4.9.3-pwhtjw2dvdvfzjwuuztkzr7b4l6zepli
module load py-nose-1.3.7-gcc-4.9.3-pwhtjw2dvdvfzjwuuztkzr7b4l6zepli
# openblas@0.2.17%gcc@4.9.3+shared=linux-x86_64
module load openblas/0.2.17-gcc-4.9.3-pw6rmlom7apfsnjtzfttyayzc7nx5e7y
module load openblas-0.2.17-gcc-4.9.3-pw6rmlom7apfsnjtzfttyayzc7nx5e7y
# py-numpy@1.11.0%gcc@4.9.3+blas+lapack=linux-x86_64
module load py-numpy/1.11.0-gcc-4.9.3-mulodttw5pcyjufva4htsktwty4qd52r
module load py-numpy-1.11.0-gcc-4.9.3-mulodttw5pcyjufva4htsktwty4qd52r
# curl@7.47.1%gcc@4.9.3=linux-x86_64
module load curl/7.47.1-gcc-4.9.3-ohz3fwsepm3b462p5lnaquv7op7naqbi
module load curl-7.47.1-gcc-4.9.3-ohz3fwsepm3b462p5lnaquv7op7naqbi
# autoconf@2.69%gcc@4.9.3=linux-x86_64
module load autoconf/2.69-gcc-4.9.3-bkibjqhgqm5e3o423ogfv2y3o6h2uoq4
module load autoconf-2.69-gcc-4.9.3-bkibjqhgqm5e3o423ogfv2y3o6h2uoq4
# cmake@3.5.0%gcc@4.9.3~doc+ncurses+openssl~qt=linux-x86_64
module load cmake/3.5.0-gcc-4.9.3-x7xnsklmgwla3ubfgzppamtbqk5rwn7t
module load cmake-3.5.0-gcc-4.9.3-x7xnsklmgwla3ubfgzppamtbqk5rwn7t
# expat@2.1.0%gcc@4.9.3=linux-x86_64
module load expat/2.1.0-gcc-4.9.3-6pkz2ucnk2e62imwakejjvbv6egncppd
module load expat-2.1.0-gcc-4.9.3-6pkz2ucnk2e62imwakejjvbv6egncppd
# git@2.8.0-rc2%gcc@4.9.3+curl+expat=linux-x86_64
module load git/2.8.0-rc2-gcc-4.9.3-3bib4hqtnv5xjjoq5ugt3inblt4xrgkd
module load git-2.8.0-rc2-gcc-4.9.3-3bib4hqtnv5xjjoq5ugt3inblt4xrgkd
The script may be further edited by removing unnecessary modules.
@@ -832,12 +828,12 @@ For example, consider the following on one system:
.. code-block:: console
$ module avail
linux-SuSE11-x86_64/antlr/2.7.7-gcc-5.3.0-bdpl46y
linux-SuSE11-x86_64/antlr-2.7.7-gcc-5.3.0-bdpl46y
$ spack module tcl loads antlr # WRONG!
# antlr@2.7.7%gcc@5.3.0~csharp+cxx~java~python arch=linux-SuSE11-x86_64
module load antlr/2.7.7-gcc-5.3.0-bdpl46y
module load antlr-2.7.7-gcc-5.3.0-bdpl46y
$ spack module tcl loads --prefix linux-SuSE11-x86_64/ antlr
# antlr@2.7.7%gcc@5.3.0~csharp+cxx~java~python arch=linux-SuSE11-x86_64
module load linux-SuSE11-x86_64/antlr/2.7.7-gcc-5.3.0-bdpl46y
module load linux-SuSE11-x86_64/antlr-2.7.7-gcc-5.3.0-bdpl46y

View File

@@ -1,4 +1,4 @@
.. Copyright 2013-2023 Lawrence Livermore National Security, LLC and other
.. Copyright 2013-2022 Lawrence Livermore National Security, LLC and other
Spack Project Developers. See the top-level COPYRIGHT file for details.
SPDX-License-Identifier: (Apache-2.0 OR MIT)

File diff suppressed because it is too large Load Diff

View File

@@ -1,4 +1,4 @@
.. Copyright 2013-2023 Lawrence Livermore National Security, LLC and other
.. Copyright 2013-2022 Lawrence Livermore National Security, LLC and other
Spack Project Developers. See the top-level COPYRIGHT file for details.
SPDX-License-Identifier: (Apache-2.0 OR MIT)
@@ -9,32 +9,27 @@
CI Pipelines
============
Spack provides commands that support generating and running automated build pipelines in CI instances. At the highest
level it works like this: provide a spack environment describing the set of packages you care about, and include a
description of how those packages should be mapped to Gitlab runners. Spack can then generate a ``.gitlab-ci.yml``
file containing job descriptions for all your packages that can be run by a properly configured CI instance. When
run, the generated pipeline will build and deploy binaries, and it can optionally report to a CDash instance
Spack provides commands that support generating and running automated build
pipelines designed for Gitlab CI. At the highest level it works like this:
provide a spack environment describing the set of packages you care about,
and include within that environment file a description of how those packages
should be mapped to Gitlab runners. Spack can then generate a ``.gitlab-ci.yml``
file containing job descriptions for all your packages that can be run by a
properly configured Gitlab CI instance. When run, the generated pipeline will
build and deploy binaries, and it can optionally report to a CDash instance
regarding the health of the builds as they evolve over time.
------------------------------
Getting started with pipelines
------------------------------
To get started with automated build pipelines a Gitlab instance with version ``>= 12.9``
(more about Gitlab CI `here <https://about.gitlab.com/product/continuous-integration/>`_)
with at least one `runner <https://docs.gitlab.com/runner/>`_ configured is required. This
can be done quickly by setting up a local Gitlab instance.
It is fairly straightforward to get started with automated build pipelines. At
a minimum, you'll need to set up a Gitlab instance (more about Gitlab CI
`here <https://about.gitlab.com/product/continuous-integration/>`_) and configure
at least one `runner <https://docs.gitlab.com/runner/>`_. Then the basic steps
for setting up a build pipeline are as follows:
It is possible to set up pipelines on gitlab.com, but the builds there are limited to
60 minutes and generic hardware. It is possible to
`hook up <https://about.gitlab.com/blog/2018/04/24/getting-started-gitlab-ci-gcp>`_
Gitlab to Google Kubernetes Engine (`GKE <https://cloud.google.com/kubernetes-engine/>`_)
or Amazon Elastic Kubernetes Service (`EKS <https://aws.amazon.com/eks>`_), though those
topics are outside the scope of this document.
After setting up a Gitlab instance for running CI, the basic steps for setting up a build pipeline are as follows:
#. Create a repository in the Gitlab instance with CI and a runner enabled.
#. Create a repository on your gitlab instance
#. Add a ``spack.yaml`` at the root containing your pipeline environment
#. Add a ``.gitlab-ci.yml`` at the root containing two jobs (one to generate
the pipeline dynamically, and one to run the generated jobs).
@@ -45,6 +40,13 @@ See the :ref:`functional_example` section for a minimal working example. See al
the :ref:`custom_Workflow` section for a link to an example of a custom workflow
based on spack pipelines.
While it is possible to set up pipelines on gitlab.com, as illustrated above, the
builds there are limited to 60 minutes and generic hardware. It is also possible to
`hook up <https://about.gitlab.com/blog/2018/04/24/getting-started-gitlab-ci-gcp>`_
Gitlab to Google Kubernetes Engine (`GKE <https://cloud.google.com/kubernetes-engine/>`_)
or Amazon Elastic Kubernetes Service (`EKS <https://aws.amazon.com/eks>`_), though those
topics are outside the scope of this document.
Spack's pipelines are now making use of the
`trigger <https://docs.gitlab.com/ee/ci/yaml/#trigger>`_ syntax to run
dynamically generated
@@ -130,35 +132,29 @@ And here's the spack environment built by the pipeline represented as a
mirrors: { "mirror": "s3://spack-public/mirror" }
ci:
gitlab-ci:
before_script:
- git clone ${SPACK_REPO}
- pushd spack && git checkout ${SPACK_CHECKOUT_VERSION} && popd
- . "./spack/share/spack/setup-env.sh"
script:
- pushd ${SPACK_CONCRETE_ENV_DIR} && spack env activate --without-view . && popd
- spack -d ci rebuild
mappings:
- match: ["os=ubuntu18.04"]
runner-attributes:
image:
name: ghcr.io/scottwittenburg/ecpe4s-ubuntu18.04-runner-x86_64:2020-09-01
entrypoint: [""]
tags:
- docker
enable-artifacts-buildcache: True
rebuild-index: False
pipeline-gen:
- any-job:
before_script:
- git clone ${SPACK_REPO}
- pushd spack && git checkout ${SPACK_CHECKOUT_VERSION} && popd
- . "./spack/share/spack/setup-env.sh"
- build-job:
tags: [docker]
image:
name: ghcr.io/scottwittenburg/ecpe4s-ubuntu18.04-runner-x86_64:2020-09-01
entrypoint: [""]
The elements of this file important to spack ci pipelines are described in more
detail below, but there are a couple of things to note about the above working
example:
.. note::
There is no ``script`` attribute specified for here. The reason for this is
Spack CI will automatically generate reasonable default scripts. More
detail on what is in these scripts can be found below.
Also notice the ``before_script`` section. It is required when using any of the
default scripts to source the ``setup-env.sh`` script in order to inform
the default scripts where to find the ``spack`` executable.
Normally ``enable-artifacts-buildcache`` is not recommended in production as it
results in large binary artifacts getting transferred back and forth between
gitlab and the runners. But in this example on gitlab.com where there is no
@@ -178,7 +174,7 @@ during subsequent pipeline runs.
With the addition of reproducible builds (#22887) a previously working
pipeline will require some changes:
* In the build-jobs, the environment location changed.
* In the build jobs (``runner-attributes``), the environment location changed.
This will typically show as a ``KeyError`` in the failing job. Be sure to
point to ``${SPACK_CONCRETE_ENV_DIR}``.
@@ -200,9 +196,9 @@ ci pipelines. These commands are covered in more detail in this section.
.. _cmd-spack-ci:
^^^^^^^^^^^^
^^^^^^^^^^^^^^^^^^
``spack ci``
^^^^^^^^^^^^
^^^^^^^^^^^^^^^^^^
Super-command for functionality related to generating pipelines and executing
pipeline jobs.
@@ -231,7 +227,7 @@ Using ``--prune-dag`` or ``--no-prune-dag`` configures whether or not jobs are
generated for specs that are already up to date on the mirror. If enabling
DAG pruning using ``--prune-dag``, more information may be required in your
``spack.yaml`` file, see the :ref:`noop_jobs` section below regarding
``noop-job``.
``service-job-attributes``.
The optional ``--check-index-only`` argument can be used to speed up pipeline
generation by telling spack to consider only remote buildcache indices when
@@ -267,11 +263,11 @@ generated by jobs in the pipeline.
.. _cmd-spack-ci-rebuild:
^^^^^^^^^^^^^^^^^^^^
^^^^^^^^^^^^^^^^^^^^^
``spack ci rebuild``
^^^^^^^^^^^^^^^^^^^^
^^^^^^^^^^^^^^^^^^^^^
The purpose of ``spack ci rebuild`` is to take an assigned
The purpose of ``spack ci rebuild`` is straightforward: take its assigned
spec and ensure a binary of a successful build exists on the target mirror.
If the binary does not already exist, it is built from source and pushed
to the mirror. The associated stand-alone tests are optionally run against
@@ -284,7 +280,7 @@ directory. The script is run in a job to install the spec from source. The
resulting binary package is pushed to the mirror. If ``cdash`` is configured
for the environment, then the build results will be uploaded to the site.
Environment variables and values in the ``ci::pipeline-gen`` section of the
Environment variables and values in the ``gitlab-ci`` section of the
``spack.yaml`` environment file provide inputs to this process. The
two main sources of environment variables are variables written into
``.gitlab-ci.yml`` by ``spack ci generate`` and the GitLab CI runtime.
@@ -302,23 +298,21 @@ A snippet from an example ``spack.yaml`` file illustrating use of this
option *and* specification of a package with broken tests is given below.
The inclusion of a spec for building ``gptune`` is not shown here. Note
that ``--tests`` is passed to ``spack ci rebuild`` as part of the
``build-job`` script.
``gitlab-ci`` script.
.. code-block:: yaml
ci:
pipeline-gen:
- build-job
script:
- . "./share/spack/setup-env.sh"
- spack --version
- cd ${SPACK_CONCRETE_ENV_DIR}
- spack env activate --without-view .
- spack config add "config:install_tree:projections:${SPACK_JOB_SPEC_PKG_NAME}:'morepadding/{architecture}/{compiler.name}-{compiler.version}/{name}-{version}-{hash}'"
- mkdir -p ${SPACK_ARTIFACTS_ROOT}/user_data
- if [[ -r /mnt/key/intermediate_ci_signing_key.gpg ]]; then spack gpg trust /mnt/key/intermediate_ci_signing_key.gpg; fi
- if [[ -r /mnt/key/spack_public_key.gpg ]]; then spack gpg trust /mnt/key/spack_public_key.gpg; fi
- spack -d ci rebuild --tests > >(tee ${SPACK_ARTIFACTS_ROOT}/user_data/pipeline_out.txt) 2> >(tee ${SPACK_ARTIFACTS_ROOT}/user_data/pipeline_err.txt >&2)
gitlab-ci:
script:
- . "./share/spack/setup-env.sh"
- spack --version
- cd ${SPACK_CONCRETE_ENV_DIR}
- spack env activate --without-view .
- spack config add "config:install_tree:projections:${SPACK_JOB_SPEC_PKG_NAME}:'morepadding/{architecture}/{compiler.name}-{compiler.version}/{name}-{version}-{hash}'"
- mkdir -p ${SPACK_ARTIFACTS_ROOT}/user_data
- if [[ -r /mnt/key/intermediate_ci_signing_key.gpg ]]; then spack gpg trust /mnt/key/intermediate_ci_signing_key.gpg; fi
- if [[ -r /mnt/key/spack_public_key.gpg ]]; then spack gpg trust /mnt/key/spack_public_key.gpg; fi
- spack -d ci rebuild --tests > >(tee ${SPACK_ARTIFACTS_ROOT}/user_data/pipeline_out.txt) 2> >(tee ${SPACK_ARTIFACTS_ROOT}/user_data/pipeline_err.txt >&2)
broken-tests-packages:
- gptune
@@ -360,31 +354,113 @@ arguments you can pass to ``spack ci reproduce-build`` in order to reproduce
a particular build locally.
------------------------------------
Job Types
A pipeline-enabled spack environment
------------------------------------
^^^^^^^^^^^^^^^
Rebuild (build)
^^^^^^^^^^^^^^^
Here's an example of a spack environment file that has been enhanced with
sections describing a build pipeline:
Rebuild jobs, denoted as ``build-job``'s in the ``pipeline-gen`` list, are jobs
associated with concrete specs that have been marked for rebuild. By default a simple
script for doing rebuild is generated, but may be modified as needed.
.. code-block:: yaml
The default script does three main steps, change directories to the pipelines concrete
environment, activate the concrete environment, and run the ``spack ci rebuild`` command:
spack:
definitions:
- pkgs:
- readline@7.0
- compilers:
- '%gcc@5.5.0'
- oses:
- os=ubuntu18.04
- os=centos7
specs:
- matrix:
- [$pkgs]
- [$compilers]
- [$oses]
mirrors:
cloud_gitlab: https://mirror.spack.io
gitlab-ci:
mappings:
- match:
- os=ubuntu18.04
runner-attributes:
tags:
- spack-kube
image: spack/ubuntu-bionic
- match:
- os=centos7
runner-attributes:
tags:
- spack-kube
image: spack/centos7
cdash:
build-group: Release Testing
url: https://cdash.spack.io
project: Spack
site: Spack AWS Gitlab Instance
.. code-block:: bash
Hopefully, the ``definitions``, ``specs``, ``mirrors``, etc. sections are already
familiar, as they are part of spack :ref:`environments`. So let's take a more
in-depth look some of the pipeline-related sections in that environment file
that might not be as familiar.
cd ${concrete_environment_dir}
spack env activate --without-view .
spack ci rebuild
The ``gitlab-ci`` section is used to configure how the pipeline workload should be
generated, mainly how the jobs for building specs should be assigned to the
configured runners on your instance. Each entry within the list of ``mappings``
corresponds to a known gitlab runner, where the ``match`` section is used
in assigning a release spec to one of the runners, and the ``runner-attributes``
section is used to configure the spec/job for that particular runner.
Both the top-level ``gitlab-ci`` section as well as each ``runner-attributes``
section can also contain the following keys: ``image``, ``tags``, ``variables``,
``before_script``, ``script``, and ``after_script``. If any of these keys are
provided at the ``gitlab-ci`` level, they will be used as the defaults for any
``runner-attributes``, unless they are overridden in those sections. Specifying
any of these keys at the ``runner-attributes`` level generally overrides the
keys specified at the higher level, with a couple exceptions. Any ``variables``
specified at both levels result in those dictionaries getting merged in the
resulting generated job, and any duplicate variable names get assigned the value
provided in the specific ``runner-attributes``. If ``tags`` are specified both
at the ``gitlab-ci`` level as well as the ``runner-attributes`` level, then the
lists of tags are combined, and any duplicates are removed.
See the section below on using a custom spack for an example of how these keys
could be used.
There are other pipeline options you can configure within the ``gitlab-ci`` section
as well.
The ``bootstrap`` section allows you to specify lists of specs from
your ``definitions`` that should be staged ahead of the environment's ``specs`` (this
section is described in more detail below). The ``enable-artifacts-buildcache`` key
takes a boolean and determines whether the pipeline uses artifacts to store and
pass along the buildcaches from one stage to the next (the default if you don't
provide this option is ``False``).
The optional ``broken-specs-url`` key tells Spack to check against a list of
specs that are known to be currently broken in ``develop``. If any such specs
are found, the ``spack ci generate`` command will fail with an error message
informing the user what broken specs were encountered. This allows the pipeline
to fail early and avoid wasting compute resources attempting to build packages
that will not succeed.
The optional ``cdash`` section provides information that will be used by the
``spack ci generate`` command (invoked by ``spack ci start``) for reporting
to CDash. All the jobs generated from this environment will belong to a
"build group" within CDash that can be tracked over time. As the release
progresses, this build group may have jobs added or removed. The url, project,
and site are used to specify the CDash instance to which build results should
be reported.
Take a look at the
`schema <https://github.com/spack/spack/blob/develop/lib/spack/spack/schema/gitlab_ci.py>`_
for the gitlab-ci section of the spack environment file, to see precisely what
syntax is allowed there.
.. _rebuild_index:
^^^^^^^^^^^^^^^^^^^^^^
Update Index (reindex)
^^^^^^^^^^^^^^^^^^^^^^
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
Note about rebuilding buildcache index
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
By default, while a pipeline job may rebuild a package, create a buildcache
entry, and push it to the mirror, it does not automatically re-generate the
@@ -399,44 +475,21 @@ not correctly reflect the mirror's contents at the end of a pipeline.
To make sure the buildcache index is up to date at the end of your pipeline,
spack generates a job to update the buildcache index of the target mirror
at the end of each pipeline by default. You can disable this behavior by
adding ``rebuild-index: False`` inside the ``ci`` section of your
spack environment.
Reindex jobs do not allow modifying the ``script`` attribute since it is automatically
generated using the target mirror listed in the ``mirrors::mirror`` configuration.
^^^^^^^^^^^^^^^^^
Signing (signing)
^^^^^^^^^^^^^^^^^
This job is run after all of the rebuild jobs are completed and is intended to be used
to sign the package binaries built by a protected CI run. Signing jobs are generated
only if a signing job ``script`` is specified and the spack CI job type is protected.
Note, if an ``any-job`` section contains a script, this will not implicitly create a
``signing`` job, a signing job may only exist if it is explicitly specified in the
configuration with a ``script`` attribute. Specifying a signing job without a script
does not create a signing job and the job configuration attributes will be ignored.
Signing jobs are always assigned the runner tags ``aws``, ``protected``, and ``notary``.
^^^^^^^^^^^^^^^^^
Cleanup (cleanup)
^^^^^^^^^^^^^^^^^
When using ``temporary-storage-url-prefix`` the cleanup job will destroy the mirror
created for the associated Gitlab pipeline. Cleanup jobs do not allow modifying the
script, but do expect that the spack command is in the path and require a
``before_script`` to be specified that sources the ``setup-env.sh`` script.
adding ``rebuild-index: False`` inside the ``gitlab-ci`` section of your
spack environment. Spack will assign the job any runner attributes found
on the ``service-job-attributes``, if you have provided that in your
``spack.yaml``.
.. _noop_jobs:
^^^^^^^^^^^^
No Op (noop)
^^^^^^^^^^^^
^^^^^^^^^^^^^^^^^^^^^^^
Note about "no-op" jobs
^^^^^^^^^^^^^^^^^^^^^^^
If no specs in an environment need to be rebuilt during a given pipeline run
(meaning all are already up to date on the mirror), a single successful job
(a NO-OP) is still generated to avoid an empty pipeline (which GitLab
considers to be an error). The ``noop-job*`` sections
considers to be an error). An optional ``service-job-attributes`` section
can be added to your ``spack.yaml`` where you can provide ``tags`` and
``image`` or ``variables`` for the generated NO-OP job. This section also
supports providing ``before_script``, ``script``, and ``after_script``, in
@@ -446,100 +499,51 @@ Following is an example of this section added to a ``spack.yaml``:
.. code-block:: yaml
spack:
ci:
pipeline-gen:
- noop-job:
tags: ['custom', 'tag']
image:
name: 'some.image.registry/custom-image:latest'
entrypoint: ['/bin/bash']
script::
- echo "Custom message in a custom script"
spack:
specs:
- openmpi
mirrors:
cloud_gitlab: https://mirror.spack.io
gitlab-ci:
mappings:
- match:
- os=centos8
runner-attributes:
tags:
- custom
- tag
image: spack/centos7
service-job-attributes:
tags: ['custom', 'tag']
image:
name: 'some.image.registry/custom-image:latest'
entrypoint: ['/bin/bash']
script:
- echo "Custom message in a custom script"
The example above illustrates how you can provide the attributes used to run
the NO-OP job in the case of an empty pipeline. The only field for the NO-OP
job that might be generated for you is ``script``, but that will only happen
if you do not provide one yourself. Notice in this example the ``script``
uses the ``::`` notation to prescribe override behavior. Without this, the
``echo`` command would have been prepended to the automatically generated script
rather than replacing it.
if you do not provide one yourself.
------------------------------------
ci.yaml
------------------------------------
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
Assignment of specs to runners
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
Here's an example of a spack configuration file describing a build pipeline:
The ``mappings`` section corresponds to a list of runners, and during assignment
of specs to runners, the list is traversed in order looking for matches, the
first runner that matches a release spec is assigned to build that spec. The
``match`` section within each runner mapping section is a list of specs, and
if any of those specs match the release spec (the ``spec.satisfies()`` method
is used), then that runner is considered a match.
.. code-block:: yaml
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
Configuration of specs/jobs for a runner
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
ci:
target: gitlab
rebuild_index: True
broken-specs-url: https://broken.specs.url
broken-tests-packages:
- gptune
pipeline-gen:
- submapping:
- match:
- os=ubuntu18.04
build-job:
tags:
- spack-kube
image: spack/ubuntu-bionic
- match:
- os=centos7
build-job:
tags:
- spack-kube
image: spack/centos7
cdash:
build-group: Release Testing
url: https://cdash.spack.io
project: Spack
site: Spack AWS Gitlab Instance
The ``ci`` config section is used to configure how the pipeline workload should be
generated, mainly how the jobs for building specs should be assigned to the
configured runners on your instance. The main section for configuring pipelines
is ``pipeline-gen``, which is a list of job attribute sections that are merged,
using the same rules as Spack configs (:ref:`config-scope-precedence`), from the bottom up.
The order sections are applied is to be consistent with how spack orders scope precedence when merging lists.
There are two main section types, ``<type>-job`` sections and ``submapping``
sections.
^^^^^^^^^^^^^^^^^^^^^^
Job Attribute Sections
^^^^^^^^^^^^^^^^^^^^^^
Each type of job may have attributes added or removed via sections in the ``pipeline-gen``
list. Job type specific attributes may be specified using the keys ``<type>-job`` to
add attributes to all jobs of type ``<type>`` or ``<type>-job-remove`` to remove attributes
of type ``<type>``. Each section may only contain one type of job attribute specification, ie. ,
``build-job`` and ``noop-job`` may not coexist but ``build-job`` and ``build-job-remove`` may.
.. note::
The ``*-remove`` specifications are applied before the additive attribute specification.
For example, in the case where both ``build-job`` and ``build-job-remove`` are listed in
the same ``pipeline-gen`` section, the value will still exist in the merged build-job after
applying the section.
All of the attributes specified are forwarded to the generated CI jobs, however special
treatment is applied to the attributes ``tags``, ``image``, ``variables``, ``script``,
``before_script``, and ``after_script`` as they are components recognized explicitly by the
Spack CI generator. For the ``tags`` attribute, Spack will remove reserved tags
(:ref:`reserved_tags`) from all jobs specified in the config. In some cases, such as for
``signing`` jobs, reserved tags will be added back based on the type of CI that is being run.
Once a runner has been chosen to build a release spec, the ``build-job*``
sections provide information determining details of the job in the context of
the runner. At lease one of the ``build-job*`` sections must contain a ``tags`` key, which
Once a runner has been chosen to build a release spec, the ``runner-attributes``
section provides information determining details of the job in the context of
the runner. The ``runner-attributes`` section must have a ``tags`` key, which
is a list containing at least one tag used to select the runner from among the
runners known to the gitlab instance. For Docker executor type runners, the
``image`` key is used to specify the Docker image used to build the release spec
@@ -550,7 +554,7 @@ information on to the runner that it needs to do its work (e.g. scheduler
parameters, etc.). Any ``variables`` provided here will be added, verbatim, to
each job.
The ``build-job`` section also allows users to supply custom ``script``,
The ``runner-attributes`` section also allows users to supply custom ``script``,
``before_script``, and ``after_script`` sections to be applied to every job
scheduled on that runner. This allows users to do any custom preparation or
cleanup tasks that fit their particular workflow, as well as completely
@@ -561,45 +565,46 @@ environment directory is located within your ``--artifacts_root`` (or if not
provided, within your ``$CI_PROJECT_DIR``), activates that environment for
you, and invokes ``spack ci rebuild``.
Sections that specify scripts (``script``, ``before_script``, ``after_script``) are all
read as lists of commands or lists of lists of commands. It is recommended to write scripts
as lists of lists if scripts will be composed via merging. The default behavior of merging
lists will remove duplicate commands and potentially apply unwanted reordering, whereas
merging lists of lists will preserve the local ordering and never removes duplicate
commands. When writing commands to the CI target script, all lists are expanded and
flattened into a single list.
.. _staging_algorithm:
^^^^^^^^^^^^^^^^^^^
Submapping Sections
^^^^^^^^^^^^^^^^^^^
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
Summary of ``.gitlab-ci.yml`` generation algorithm
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
A special case of attribute specification is the ``submapping`` section which may be used
to apply job attributes to build jobs based on the package spec associated with the rebuild
job. Submapping is specified as a list of spec ``match`` lists associated with
``build-job``/``build-job-remove`` sections. There are two options for ``match_behavior``,
either ``first`` or ``merge`` may be specified. In either case, the ``submapping`` list is
processed from the bottom up, and then each ``match`` list is searched for a string that
satisfies the check ``spec.satisfies({match_item})`` for each concrete spec.
All specs yielded by the matrix (or all the specs in the environment) have their
dependencies computed, and the entire resulting set of specs are staged together
before being run through the ``gitlab-ci/mappings`` entries, where each staged
spec is assigned a runner. "Staging" is the name given to the process of
figuring out in what order the specs should be built, taking into consideration
Gitlab CI rules about jobs/stages. In the staging process the goal is to maximize
the number of jobs in any stage of the pipeline, while ensuring that the jobs in
any stage only depend on jobs in previous stages (since those jobs are guaranteed
to have completed already). As a runner is determined for a job, the information
in the ``runner-attributes`` is used to populate various parts of the job
description that will be used by Gitlab CI. Once all the jobs have been assigned
a runner, the ``.gitlab-ci.yml`` is written to disk.
The the case of ``match_behavior: first``, the first ``match`` section in the list of
``submappings`` that contains a string that satisfies the spec will apply it's
``build-job*`` attributes to the rebuild job associated with that spec. This is the
default behavior and will be the method if no ``match_behavior`` is specified.
The short example provided above would result in the ``readline``, ``ncurses``,
and ``pkgconf`` packages getting staged and built on the runner chosen by the
``spack-k8s`` tag. In this example, spack assumes the runner is a Docker executor
type runner, and thus certain jobs will be run in the ``centos7`` container,
and others in the ``ubuntu-18.04`` container. The resulting ``.gitlab-ci.yml``
will contain 6 jobs in three stages. Once the jobs have been generated, the
presence of a ``SPACK_CDASH_AUTH_TOKEN`` environment variable during the
``spack ci generate`` command would result in all of the jobs being put in a
build group on CDash called "Release Testing" (that group will be created if
it didn't already exist).
The the case of ``merge`` match, all of the ``match`` sections in the list of
``submappings`` that contain a string that satisfies the spec will have the associated
``build-job*`` attributes applied to the rebuild job associated with that spec. Again,
the attributes will be merged starting from the bottom match going up to the top match.
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
Optional compiler bootstrapping
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
In the case that no match is found in a submapping section, no additional attributes will be applied.
^^^^^^^^^^^^^
Bootstrapping
^^^^^^^^^^^^^
The ``bootstrap`` section allows you to specify lists of specs from
your ``definitions`` that should be staged ahead of the environment's ``specs``. At the moment
Spack pipelines also have support for bootstrapping compilers on systems that
may not already have the desired compilers installed. The idea here is that
you can specify a list of things to bootstrap in your ``definitions``, and
spack will guarantee those will be installed in a phase of the pipeline before
your release specs, so that you can rely on those packages being available in
the binary mirror when you need them later on in the pipeline. At the moment
the only viable use-case for bootstrapping is to install compilers.
Here's an example of what bootstrapping some compilers might look like:
@@ -632,18 +637,18 @@ Here's an example of what bootstrapping some compilers might look like:
exclude:
- '%gcc@7.3.0 os=centos7'
- '%gcc@5.5.0 os=ubuntu18.04'
ci:
gitlab-ci:
bootstrap:
- name: compiler-pkgs
compiler-agnostic: true
pipeline-gen:
# similar to the example higher up in this description
mappings:
# mappings similar to the example higher up in this description
...
The example above adds a list to the ``definitions`` called ``compiler-pkgs``
(you can add any number of these), which lists compiler packages that should
be staged ahead of the full matrix of release specs (in this example, only
readline). Then within the ``ci`` section, note the addition of a
readline). Then within the ``gitlab-ci`` section, note the addition of a
``bootstrap`` section, which can contain a list of items, each referring to
a list in the ``definitions`` section. These items can either
be a dictionary or a string. If you supply a dictionary, it must have a name
@@ -675,86 +680,6 @@ environment/stack file, and in that case no bootstrapping will be done (only the
specs will be staged for building) and the runners will be expected to already
have all needed compilers installed and configured for spack to use.
^^^^^^^^^^^^^^^^^^^
Pipeline Buildcache
^^^^^^^^^^^^^^^^^^^
The ``enable-artifacts-buildcache`` key
takes a boolean and determines whether the pipeline uses artifacts to store and
pass along the buildcaches from one stage to the next (the default if you don't
provide this option is ``False``).
^^^^^^^^^^^^^^^^
Broken Specs URL
^^^^^^^^^^^^^^^^
The optional ``broken-specs-url`` key tells Spack to check against a list of
specs that are known to be currently broken in ``develop``. If any such specs
are found, the ``spack ci generate`` command will fail with an error message
informing the user what broken specs were encountered. This allows the pipeline
to fail early and avoid wasting compute resources attempting to build packages
that will not succeed.
^^^^^
CDash
^^^^^
The optional ``cdash`` section provides information that will be used by the
``spack ci generate`` command (invoked by ``spack ci start``) for reporting
to CDash. All the jobs generated from this environment will belong to a
"build group" within CDash that can be tracked over time. As the release
progresses, this build group may have jobs added or removed. The url, project,
and site are used to specify the CDash instance to which build results should
be reported.
Take a look at the
`schema <https://github.com/spack/spack/blob/develop/lib/spack/spack/schema/ci.py>`_
for the ci section of the spack environment file, to see precisely what
syntax is allowed there.
.. _reserved_tags:
^^^^^^^^^^^^^
Reserved Tags
^^^^^^^^^^^^^
Spack has a subset of tags (``public``, ``protected``, and ``notary``) that it reserves
for classifying runners that may require special permissions or access. The tags
``public`` and ``protected`` are used to distinguish between runners that use public
permissions and runners with protected permissions. The ``notary`` tag is a special tag
that is used to indicate runners that have access to the highly protected information
used for signing binaries using the ``signing`` job.
.. _staging_algorithm:
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
Summary of ``.gitlab-ci.yml`` generation algorithm
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
All specs yielded by the matrix (or all the specs in the environment) have their
dependencies computed, and the entire resulting set of specs are staged together
before being run through the ``ci/pipeline-gen`` entries, where each staged
spec is assigned a runner. "Staging" is the name given to the process of
figuring out in what order the specs should be built, taking into consideration
Gitlab CI rules about jobs/stages. In the staging process the goal is to maximize
the number of jobs in any stage of the pipeline, while ensuring that the jobs in
any stage only depend on jobs in previous stages (since those jobs are guaranteed
to have completed already). As a runner is determined for a job, the information
in the merged ``any-job*`` and ``build-job*`` sections is used to populate various parts of the job
description that will be used by the target CI pipelines. Once all the jobs have been assigned
a runner, the ``.gitlab-ci.yml`` is written to disk.
The short example provided above would result in the ``readline``, ``ncurses``,
and ``pkgconf`` packages getting staged and built on the runner chosen by the
``spack-k8s`` tag. In this example, spack assumes the runner is a Docker executor
type runner, and thus certain jobs will be run in the ``centos7`` container,
and others in the ``ubuntu-18.04`` container. The resulting ``.gitlab-ci.yml``
will contain 6 jobs in three stages. Once the jobs have been generated, the
presence of a ``SPACK_CDASH_AUTH_TOKEN`` environment variable during the
``spack ci generate`` command would result in all of the jobs being put in a
build group on CDash called "Release Testing" (that group will be created if
it didn't already exist).
-------------------------------------
Using a custom spack in your pipeline
-------------------------------------
@@ -801,21 +726,23 @@ generated by ``spack ci generate``. You also want your generated rebuild jobs
spack:
...
ci:
pipeline-gen:
- build-job:
tags:
- spack-kube
image: spack/ubuntu-bionic
before_script:
- git clone ${SPACK_REPO}
- pushd spack && git checkout ${SPACK_REF} && popd
- . "./spack/share/spack/setup-env.sh"
script:
- spack env activate --without-view ${SPACK_CONCRETE_ENV_DIR}
- spack -d ci rebuild
after_script:
- rm -rf ./spack
gitlab-ci:
mappings:
- match:
- os=ubuntu18.04
runner-attributes:
tags:
- spack-kube
image: spack/ubuntu-bionic
before_script:
- git clone ${SPACK_REPO}
- pushd spack && git checkout ${SPACK_REF} && popd
- . "./spack/share/spack/setup-env.sh"
script:
- spack env activate --without-view ${SPACK_CONCRETE_ENV_DIR}
- spack -d ci rebuild
after_script:
- rm -rf ./spack
Now all of the generated rebuild jobs will use the same shell script to clone
spack before running their actual workload.
@@ -904,4 +831,3 @@ verify binary packages (when installing or creating buildcaches). You could
also have already trusted a key spack know about, or if no key is present anywhere,
spack will install specs using ``--no-check-signature`` and create buildcaches
using ``-u`` (for unsigned binaries).

View File

@@ -1,4 +1,4 @@
.. Copyright 2013-2023 Lawrence Livermore National Security, LLC and other
.. Copyright 2013-2022 Lawrence Livermore National Security, LLC and other
Spack Project Developers. See the top-level COPYRIGHT file for details.
SPDX-License-Identifier: (Apache-2.0 OR MIT)

View File

@@ -1,4 +1,4 @@
.. Copyright 2013-2023 Lawrence Livermore National Security, LLC and other
.. Copyright 2013-2022 Lawrence Livermore National Security, LLC and other
Spack Project Developers. See the top-level COPYRIGHT file for details.
SPDX-License-Identifier: (Apache-2.0 OR MIT)
@@ -32,16 +32,11 @@ A package repository a directory structured like this::
...
The top-level ``repo.yaml`` file contains configuration metadata for the
repository. The packages subdirectory, typically ``packages``, contains
subdirectories for each package in the repository. Each package directory
contains a ``package.py`` file and any patches or other files needed to build the
repository, and the ``packages`` directory contains subdirectories for
each package in the repository. Each package directory contains a
``package.py`` file and any patches or other files needed to build the
package.
The ``repo.yaml`` file may also contain a ``subdirectory`` key,
which can modify the name of the subdirectory used for packages. As seen above,
the default value is ``packages``. An empty string (``subdirectory: ''``) requires
a flattened repo structure in which the package names are top-level subdirectories.
Package repositories allow you to:
1. Maintain your own packages separately from Spack;
@@ -378,24 +373,6 @@ You can supply a custom namespace with a second argument, e.g.:
repo:
namespace: 'llnl.comp'
You can also create repositories with custom structure with the ``-d/--subdirectory``
argument, e.g.:
.. code-block:: console
$ spack repo create -d applications myrepo apps
==> Created repo with namespace 'apps'.
==> To register it with Spack, run this command:
spack repo add ~/myrepo
$ ls myrepo
applications/ repo.yaml
$ cat myrepo/repo.yaml
repo:
namespace: apps
subdirectory: applications
^^^^^^^^^^^^^^^^^^
``spack repo add``
^^^^^^^^^^^^^^^^^^

View File

@@ -1,13 +1,12 @@
sphinx==7.2.6
sphinxcontrib-programoutput==0.17
sphinx_design==0.5.0
sphinx-rtd-theme==1.3.0
python-levenshtein==0.21.1
docutils==0.18.1
pygments==2.16.1
urllib3==2.0.4
pytest==7.4.2
isort==5.12.0
black==23.9.1
flake8==6.1.0
mypy==1.5.1
# These dependencies should be installed using pip in order
# to build the documentation.
sphinx>=3.4,!=4.1.2,!=5.1.0
sphinxcontrib-programoutput
sphinx-design
sphinx-rtd-theme
python-levenshtein
# Restrict to docutils <0.17 to workaround a list rendering issue in sphinx.
# https://stackoverflow.com/questions/67542699
docutils <0.17
pygments <2.13

View File

@@ -1,478 +0,0 @@
.. Copyright 2013-2022 Lawrence Livermore National Security, LLC and other
Spack Project Developers. See the top-level COPYRIGHT file for details.
SPDX-License-Identifier: (Apache-2.0 OR MIT)
.. _signing:
=====================
Spack Package Signing
=====================
The goal of package signing in Spack is to provide data integrity
assurances around official packages produced by the automated Spack CI
pipelines. These assurances directly address the security of Spacks
software supply chain by explaining why a security-conscious user can
be reasonably justified in the belief that packages installed via Spack
have an uninterrupted auditable trail back to change management
decisions judged to be appropriate by the Spack maintainers. This is
achieved through cryptographic signing of packages built by Spack CI
pipelines based on code that has been transparently reviewed and
approved on GitHub. This document describes the signing process for
interested users.
.. _risks:
------------------------------
Risks, Impact and Threat Model
------------------------------
This document addresses the approach taken to safeguard Spacks
reputation with regard to the integrity of the package data produced by
Spacks CI pipelines. It does not address issues of data confidentiality
(Spack is intended to be largely open source) or availability (efforts
are described elsewhere). With that said the main reputational risk can
be broadly categorized as a loss of faith in the data integrity due to a
breach of the private key used to sign packages. Remediation of a
private key breach would require republishing the public key with a
revocation certificate, generating a new signing key, an assessment and
potential rebuild/resigning of all packages since the key was breached,
and finally direct intervention by every spack user to update their copy
of Spacks public keys used for local verification.
The primary threat model used in mitigating the risks of these stated
impacts is one of individual error not malicious intent or insider
threat. The primary objective is to avoid the above impacts by making a
private key breach nearly impossible due to oversight or configuration
error. Obvious and straightforward measures are taken to mitigate issues
of malicious interference in data integrity and insider threats but
these attack vectors are not systematically addressed. It should be hard
to exfiltrate the private key intentionally, and almost impossible to
leak the key by accident.
.. _overview:
-----------------
Pipeline Overview
-----------------
Spack pipelines build software through progressive stages where packages
in later stages nominally depend on packages built in earlier stages.
For both technical and design reasons these dependencies are not
implemented through the default GitLab artifacts mechanism; instead
built packages are uploaded to AWS S3 mirrors (buckets) where they are
retrieved by subsequent stages in the pipeline. Two broad categories of
pipelines exist: Pull Request (PR) pipelines and Develop/Release
pipelines.
- PR pipelines are launched in response to pull requests made by
trusted and untrusted users. Packages built on these pipelines upload
code to quarantined AWS S3 locations which cache the built packages
for the purposes of review and iteration on the changes proposed in
the pull request. Packages built on PR pipelines can come from
untrusted users so signing of these pipelines is not implemented.
Jobs in these pipelines are executed via normal GitLab runners both
within the AWS GitLab infrastructure and at affiliated institutions.
- Develop and Release pipelines **sign** the packages they produce and carry
strong integrity assurances that trace back to auditable change management
decisions. These pipelines only run after members from a trusted group of
reviewers verify that the proposed changes in a pull request are appropriate.
Once the PR is merged, or a release is cut, a pipeline is run on protected
GitLab runners which provide access to the required signing keys within the
job. Intermediary keys are used to sign packages in each stage of the
pipeline as they are built and a final job officially signs each package
external to any specific packages build environment. An intermediate key
exists in the AWS infrastructure and for each affiliated instritution that
maintains protected runners. The runners that execute these pipelines
exclusively accept jobs from protected branches meaning the intermediate keys
are never exposed to unreviewed code and the official keys are never exposed
to any specific build environment.
.. _key_architecture:
----------------
Key Architecture
----------------
Spacks CI process uses public-key infrastructure (PKI) based on GNU Privacy
Guard (gpg) keypairs to sign public releases of spack package metadata, also
called specs. Two classes of GPG keys are involved in the process to reduce the
impact of an individual private key compromise, these key classes are the
*Intermediate CI Key* and *Reputational Key*. Each of these keys has signing
sub-keys that are used exclusively for signing packages. This can be confusing
so for the purpose of this explanation well refer to Root and Signing keys.
Each key has a private and a public component as well as one or more identities
and zero or more signatures.
-------------------
Intermediate CI Key
-------------------
The Intermediate key class is used to sign and verify packages between stages
within a develop or release pipeline. An intermediate key exists for the AWS
infrastructure as well as each affiliated institution that maintains protected
runners. These intermediate keys are made available to the GitLab execution
environment building the package so that the packages dependencies may be
verified by the Signing Intermediate CI Public Key and the final package may be
signed by the Signing Intermediate CI Private Key.
+---------------------------------------------------------------------------------------------------------+
| **Intermediate CI Key (GPG)** |
+==================================================+======================================================+
| Root Intermediate CI Private Key (RSA 4096)# | Root Intermediate CI Public Key (RSA 4096) |
+--------------------------------------------------+------------------------------------------------------+
| Signing Intermediate CI Private Key (RSA 4096) | Signing Intermediate CI Public Key (RSA 4096) |
+--------------------------------------------------+------------------------------------------------------+
| Identity: “Intermediate CI Key <maintainers@spack.io>” |
+---------------------------------------------------------------------------------------------------------+
| Signatures: None |
+---------------------------------------------------------------------------------------------------------+
The *Root intermediate CI Private Key*\ Is stripped out of the GPG key and
stored offline completely separate from Spacks infrastructure. This allows the
core development team to append revocation certificates to the GPG key and
issue new sub-keys for use in the pipeline. It is our expectation that this
will happen on a semi regular basis. A corollary of this is that *this key
should not be used to verify package integrity outside the internal CI process.*
----------------
Reputational Key
----------------
The Reputational Key is the public facing key used to sign complete groups of
development and release packages. Only one key pair exsits in this class of
keys. In contrast to the Intermediate CI Key the Reputational Key *should* be
used to verify package integrity. At the end of develop and release pipeline a
final pipeline job pulls down all signed package metadata built by the pipeline,
verifies they were signed with an Intermediate CI Key, then strips the
Intermediate CI Key signature from the package and re-signs them with the
Signing Reputational Private Key. The officially signed packages are then
uploaded back to the AWS S3 mirror. Please note that separating use of the
reputational key into this final job is done to prevent leakage of the key in a
spack package. Because the Signing Reputational Private Key is never exposed to
a build job it cannot accidentally end up in any built package.
+---------------------------------------------------------------------------------------------------------+
| **Reputational Key (GPG)** |
+==================================================+======================================================+
| Root Reputational Private Key (RSA 4096)# | Root Reputational Public Key (RSA 4096) |
+--------------------------------------------------+------------------------------------------------------+
| Signing Reputational Private Key (RSA 4096) | Signing Reputational Public Key (RSA 4096) |
+--------------------------------------------------+------------------------------------------------------+
| Identity: “Spack Project <maintainers@spack.io>” |
+---------------------------------------------------------------------------------------------------------+
| Signatures: Signed by core development team [#f1]_ |
+---------------------------------------------------------------------------------------------------------+
The Root Reputational Private Key is stripped out of the GPG key and stored
offline completely separate from Spacks infrastructure. This allows the core
development team to append revocation certificates to the GPG key in the
unlikely event that the Signing Reputation Private Key is compromised. In
general it is the expectation that rotating this key will happen infrequently if
at all. This should allow relatively transparent verification for the end-user
community without needing deep familiarity with GnuPG or Public Key
Infrastructure.
.. _build_cache_format:
------------------
Build Cache Format
------------------
A binary package consists of a metadata file unambiguously defining the
built package (and including other details such as how to relocate it)
and the installation directory of the package stored as a compressed
archive file. The metadata files can either be unsigned, in which case
the contents are simply the json-serialized concrete spec plus metadata,
or they can be signed, in which case the json-serialized concrete spec
plus metadata is wrapped in a gpg cleartext signature. Built package
metadata files are named to indicate the operating system and
architecture for which the package was built as well as the compiler
used to build it and the packages name and version. For example::
linux-ubuntu18.04-haswell-gcc-7.5.0-zlib-1.2.12-llv2ysfdxnppzjrt5ldybb5c52qbmoow.spec.json.sig
would contain the concrete spec and binary metadata for a binary package
of ``zlib@1.2.12``, built for the ``ubuntu`` operating system and ``haswell``
architecture. The id of the built package exists in the name of the file
as well (after the package name and version) and in this case begins
with ``llv2ys``. The id distinguishes a particular built package from all
other built packages with the same os/arch, compiler, name, and version.
Below is an example of a signed binary package metadata file. Such a
file would live in the ``build_cache`` directory of a binary mirror::
-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA512
{
"spec": {
<concrete-spec-contents-omitted>
},
"buildcache_layout_version": 1,
"binary_cache_checksum": {
"hash_algorithm": "sha256",
"hash": "4f1e46452c35a5e61bcacca205bae1bfcd60a83a399af201a29c95b7cc3e1423"
}
}
-----BEGIN PGP SIGNATURE-----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=3gvm
-----END PGP SIGNATURE-----
If a user has trusted the public key associated with the private key
used to sign the above spec file, the signature can be verified with
gpg, as follows::
$ gpg verify linux-ubuntu18.04-haswell-gcc-7.5.0-zlib-1.2.12-llv2ysfdxnppzjrt5ldybb5c52qbmoow.spec.json.sig
The metadata (regardless whether signed or unsigned) contains the checksum
of the ``.spack`` file containing the actual installation. The checksum should
be compared to a checksum computed locally on the ``.spack`` file to ensure the
contents have not changed since the binary spec plus metadata were signed. The
``.spack`` files are actually tarballs containing the compressed archive of the
install tree. These files, along with the metadata files, live within the
``build_cache`` directory of the mirror, and together are organized as follows::
build_cache/
# unsigned metadata (for indexing, contains sha256 of .spack file)
<arch>-<compiler>-<name>-<ver>-24zvipcqgg2wyjpvdq2ajy5jnm564hen.spec.json
# clearsigned metadata (same as above, but signed)
<arch>-<compiler>-<name>-<ver>-24zvipcqgg2wyjpvdq2ajy5jnm564hen.spec.json.sig
<arch>/
<compiler>/
<name>-<ver>/
# tar.gz-compressed prefix (may support more compression formats later)
<arch>-<compiler>-<name>-<ver>-24zvipcqgg2wyjpvdq2ajy5jnm564hen.spack
Uncompressing and extracting the ``.spack`` file results in the install tree.
This is in contrast to previous versions of spack, where the ``.spack`` file
contained a (duplicated) metadata file, a signature file and a nested tarball
containing the install tree.
.. _internal_implementation:
-----------------------
Internal Implementation
-----------------------
The technical implementation of the pipeline signing process includes components
defined in Amazon Web Services, the Kubernetes cluster, at affilicated
institutions, and the GitLab/GitLab Runner deployment. We present the techincal
implementation in two interdependent sections. The first addresses how secrets
are managed through the lifecycle of a develop or release pipeline. The second
section describes how Gitlab Runner and pipelines are configured and managed to
support secure automated signing.
Secrets Management
^^^^^^^^^^^^^^^^^^
As stated above the Root Private Keys (intermediate and reputational)
are stripped from the GPG keys and stored outside Spacks
infrastructure.
.. warning::
**TODO**
- Explanation here about where and how access is handled for these keys.
- Both Root private keys are protected with strong passwords
- Who has access to these and how?
**Intermediate CI Key**
-----------------------
Multiple intermediate CI signing keys exist, one Intermediate CI Key for jobs
run in AWS, and one key for each affiliated institution (e.g. Univerity of
Oregon). Here we describe how the Intermediate CI Key is managed in AWS:
The Intermediate CI Key (including the Signing Intermediate CI Private Key is
exported as an ASCII armored file and stored in a Kubernetes secret called
``spack-intermediate-ci-signing-key``. For convenience sake, this same secret
contains an ASCII-armored export of just the *public* components of the
Reputational Key. This secret also contains the *public* components of each of
the affiliated institutions' Intermediate CI Key. These are potentially needed
to verify dependent packages which may have been found in the public mirror or
built by a protected job running on an affiliated institution's infrastrcuture
in an earlier stage of the pipeline.
Procedurally the ``spack-intermediate-ci-signing-key`` secret is used in
the following way:
1. A ``large-arm-prot`` or ``large-x86-prot`` protected runner picks up
a job tagged ``protected`` from a protected GitLab branch. (See
`Protected Runners and Reserved Tags <#_8bawjmgykv0b>`__).
2. Based on its configuration, the runner creates a job Pod in the
pipeline namespace and mounts the spack-intermediate-ci-signing-key
Kubernetes secret into the build container
3. The Intermediate CI Key, affiliated institutions' public key and the
Reputational Public Key are imported into a keyring by the ``spack gpg …``
sub-command. This is initiated by the jobs build script which is created by
the generate job at the beginning of the pipeline.
4. Assuming the package has dependencies those specs are verified using
the keyring.
5. The package is built and the spec.json is generated
6. The spec.json is signed by the keyring and uploaded to the mirrors
build cache.
**Reputational Key**
--------------------
Because of the increased impact to end users in the case of a private
key breach, the Reputational Key is managed separately from the
Intermediate CI Keys and has additional controls. First, the Reputational
Key was generated outside of Spacks infrastructure and has been signed
by the core development team. The Reputational Key (along with the
Signing Reputational Private Key) was then ASCII armor exported to a
file. Unlike the Intermediate CI Key this exported file is not stored as
a base64 encoded secret in Kubernetes. Instead\ *the key file
itself*\ is encrypted and stored in Kubernetes as the
``spack-signing-key-encrypted`` secret in the pipeline namespace.
The encryption of the exported Reputational Key (including the Signing
Reputational Private Key) is handled by `AWS Key Management Store (KMS) data
keys
<https://docs.aws.amazon.com/kms/latest/developerguide/concepts.html#data-keys>`__.
The private key material is decrypted and imported at the time of signing into a
memory mounted temporary directory holding the keychain. The signing job uses
the `AWS Encryption SDK
<https://docs.aws.amazon.com/encryption-sdk/latest/developer-guide/crypto-cli.html>`__
(i.e. ``aws-encryption-cli``) to decrypt the Reputational Key. Permission to
decrypt the key is granted to the job Pod through a Kubernetes service account
specifically used for this, and only this, function. Finally, for convenience
sake, this same secret contains an ASCII-armored export of the *public*
components of the Intermediate CI Keys and the Reputational Key. This allows the
signing script to verify that packages were built by the pipeline (both on AWS
or at affiliated institutions), or signed previously as a part of a different
pipeline. This is is done *before* importing decrypting and importing the
Signing Reputational Private Key material and officially signing the packages.
Procedurally the ``spack-singing-key-encrypted`` secret is used in the
following way:
1. The ``spack-package-signing-gitlab-runner`` protected runner picks
up a job tagged ``notary`` from a protected GitLab branch (See
`Protected Runners and Reserved Tags <#_8bawjmgykv0b>`__).
2. Based on its configuration, the runner creates a job pod in the
pipeline namespace. The job is run in a stripped down purpose-built
image ``ghcr.io/spack/notary:latest`` Docker image. The runner is
configured to only allow running jobs with this image.
3. The runner also mounts the ``spack-signing-key-encrypted`` secret to
a path on disk. Note that this becomes several files on disk, the
public components of the Intermediate CI Keys, the public components
of the Reputational CI, and an AWS KMS encrypted file containing the
Singing Reputational Private Key.
4. In addition to the secret, the runner creates a tmpfs memory mounted
directory where the GnuPG keyring will be created to verify, and
then resign the package specs.
5. The job script syncs all spec.json.sig files from the build cache to
a working directory in the jobs execution environment.
6. The job script then runs the ``sign.sh`` script built into the
notary Docker image.
7. The ``sign.sh`` script imports the public components of the
Reputational and Intermediate CI Keys and uses them to verify good
signatures on the spec.json.sig files. If any signed spec does not
verify the job immediately fails.
8. Assuming all specs are verified, the ``sign.sh`` script then unpacks
the spec json data from the signed file in preparation for being
re-signed with the Reputational Key.
9. The private components of the Reputational Key are decrypted to
standard out using ``aws-encryption-cli`` directly into a ``gpg
import …`` statement which imports the key into the
keyring mounted in-memory.
10. The private key is then used to sign each of the json specs and the
keyring is removed from disk.
11. The re-signed json specs are resynced to the AWS S3 Mirror and the
public signing of the packages for the develop or release pipeline
that created them is complete.
Non service-account access to the private components of the Reputational
Key that are managed through access to the symmetric secret in KMS used
to encrypt the data key (which in turn is used to encrypt the GnuPG key
- See:\ `Encryption SDK
Documentation <https://docs.aws.amazon.com/encryption-sdk/latest/developer-guide/crypto-cli-examples.html#cli-example-encrypt-file>`__).
A small trusted subset of the core development team are the only
individuals with access to this symmetric key.
.. _protected_runners:
Protected Runners and Reserved Tags
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
Spack has a large number of Gitlab Runners operating in its build farm.
These include runners deployed in the AWS Kubernetes cluster as well as
runners deployed at affiliated institutions. The majority of runners are
shared runners that operate across projects in gitlab.spack.io. These
runners pick up jobs primarily from the spack/spack project and execute
them in PR pipelines.
A small number of runners operating on AWS and at affiliated institutions are
registered as specific *protected* runners on the spack/spack project. In
addition to protected runners there are protected branches on the spack/spack
project. These are the ``develop`` branch, any release branch (i.e. managed with
the ``releases/v*`` wildcard) and any tag branch (managed with the ``v*``
wildcard) Finally Spacks pipeline generation code reserves certain tags to make
sure jobs are routed to the correct runners, these tags are ``public``,
``protected``, and ``notary``. Understanding how all this works together to
protect secrets and provide integrity assurances can be a little confusing so
lets break these down:
- **Protected Branches**- Protected branches in Spack prevent anyone
other than Maintainers in GitLab from pushing code. In the case of
Spack the only Maintainer level entity pushing code to protected
branches is Spack bot. Protecting branches also marks them in such a
way that Protected Runners will only run jobs from those branches
- **Protected Runners**- Protected Runners only run jobs from protected
branches. Because protected runners have access to secrets, it's critical
that they not run Jobs from untrusted code (i.e. PR branches). If they did it
would be possible for a PR branch to tag a job in such a way that a protected
runner executed that job and mounted secrets into a code execution
environment that had not been reviewed by Spack maintainers. Note however
that in the absence of tagging used to route jobs, public runners *could* run
jobs from protected branches. No secrets would be at risk of being breached
because non-protected runners do not have access to those secrets; lack of
secrets would, however, cause the jobs to fail.
- **Reserved Tags**- To mitigate the issue of public runners picking up
protected jobs Spack uses a small set of “reserved” job tags (Note that these
are *job* tags not git tags). These tags are “public”, “private”, and
“notary.” The majority of jobs executed in Spacks GitLab instance are
executed via a ``generate`` job. The generate job code systematically ensures
that no user defined configuration sets these tags. Instead, the ``generate``
job sets these tags based on rules related to the branch where this pipeline
originated. If the job is a part of a pipeline on a PR branch it sets the
``public`` tag. If the job is part of a pipeline on a protected branch it
sets the ``protected`` tag. Finally if the job is the package signing job and
it is running on a pipeline that is part of a protected branch then it sets
the ``notary`` tag.
Protected Runners are configured to only run jobs from protected branches. Only
jobs running in pipelines on protected branches are tagged with ``protected`` or
``notary`` tags. This tightly couples jobs on protected branches to protected
runners that provide access to the secrets required to sign the built packages.
The secrets are can **only** be accessed via:
1. Runners under direct control of the core development team.
2. Runners under direct control of trusted maintainers at affiliated institutions.
3. By code running the automated pipeline that has been reviewed by the
Spack maintainers and judged to be appropriate.
Other attempts (either through malicious intent or incompetence) can at
worst grab jobs intended for protected runners which will cause those
jobs to fail alerting both Spack maintainers and the core development
team.
.. [#f1]
The Reputational Key has also cross signed core development team
keys.

View File

@@ -1,4 +1,4 @@
# Copyright 2013-2023 Lawrence Livermore National Security, LLC and other
# Copyright 2013-2022 Lawrence Livermore National Security, LLC and other
# Spack Project Developers. See the top-level COPYRIGHT file for details.
#
# SPDX-License-Identifier: (Apache-2.0 OR MIT)

461
lib/spack/env/cc vendored
View File

@@ -1,7 +1,7 @@
#!/bin/sh -f
# shellcheck disable=SC2034 # evals in this script fool shellcheck
#
# Copyright 2013-2023 Lawrence Livermore National Security, LLC and other
# Copyright 2013-2022 Lawrence Livermore National Security, LLC and other
# Spack Project Developers. See the top-level COPYRIGHT file for details.
#
# SPDX-License-Identifier: (Apache-2.0 OR MIT)
@@ -416,261 +416,197 @@ input_command="$*"
# The lists are all bell-separated to be as flexible as possible, as their
# contents may come from the command line, from ' '-separated lists,
# ':'-separated lists, etc.
include_dirs_list=""
lib_dirs_list=""
rpath_dirs_list=""
system_include_dirs_list=""
system_lib_dirs_list=""
system_rpath_dirs_list=""
isystem_system_include_dirs_list=""
isystem_include_dirs_list=""
libs_list=""
other_args_list=""
parse_Wl() {
while [ $# -ne 0 ]; do
if [ "$wl_expect_rpath" = yes ]; then
if system_dir "$1"; then
append return_system_rpath_dirs_list "$1"
else
append return_rpath_dirs_list "$1"
fi
wl_expect_rpath=no
else
case "$1" in
-rpath=*)
arg="${1#-rpath=}"
if [ -z "$arg" ]; then
shift; continue
elif system_dir "$arg"; then
append return_system_rpath_dirs_list "$arg"
else
append return_rpath_dirs_list "$arg"
fi
;;
--rpath=*)
arg="${1#--rpath=}"
if [ -z "$arg" ]; then
shift; continue
elif system_dir "$arg"; then
append return_system_rpath_dirs_list "$arg"
else
append return_rpath_dirs_list "$arg"
fi
;;
-rpath|--rpath)
wl_expect_rpath=yes
;;
"$dtags_to_strip")
;;
-Wl)
# Nested -Wl,-Wl means we're in NAG compiler territory, we don't support
# it.
return 1
;;
*)
append return_other_args_list "-Wl,$1"
while [ $# -ne 0 ]; do
# an RPATH to be added after the case statement.
rp=""
# Multiple consecutive spaces in the command line can
# result in blank arguments
if [ -z "$1" ]; then
shift
continue
fi
if [ -n "${SPACK_COMPILER_FLAGS_KEEP}" ] ; then
# NOTE: the eval is required to allow `|` alternatives inside the variable
eval "\
case \"\$1\" in
$SPACK_COMPILER_FLAGS_KEEP)
append other_args_list \"\$1\"
shift
continue
;;
esac
"
fi
shift
done
}
categorize_arguments() {
unset IFS
return_other_args_list=""
return_isystem_was_used=""
return_isystem_system_include_dirs_list=""
return_isystem_include_dirs_list=""
return_system_include_dirs_list=""
return_include_dirs_list=""
return_system_lib_dirs_list=""
return_lib_dirs_list=""
return_system_rpath_dirs_list=""
return_rpath_dirs_list=""
# Global state for keeping track of -Wl,-rpath -Wl,/path
wl_expect_rpath=no
# Same, but for -Xlinker -rpath -Xlinker /path
xlinker_expect_rpath=no
while [ $# -ne 0 ]; do
# an RPATH to be added after the case statement.
rp=""
# Multiple consecutive spaces in the command line can
# result in blank arguments
if [ -z "$1" ]; then
shift
continue
fi
if [ -n "${SPACK_COMPILER_FLAGS_KEEP}" ] ; then
# NOTE: the eval is required to allow `|` alternatives inside the variable
# the replace list is a space-separated list of pipe-separated pairs,
# the first in each pair is the original prefix to be matched, the
# second is the replacement prefix
if [ -n "${SPACK_COMPILER_FLAGS_REPLACE}" ] ; then
for rep in ${SPACK_COMPILER_FLAGS_REPLACE} ; do
before=${rep%|*}
after=${rep#*|}
eval "\
case \"\$1\" in
$SPACK_COMPILER_FLAGS_KEEP)
append return_other_args_list \"\$1\"
shift
continue
;;
esac
stripped=\"\${1##$before}\"
"
fi
# the replace list is a space-separated list of pipe-separated pairs,
# the first in each pair is the original prefix to be matched, the
# second is the replacement prefix
if [ -n "${SPACK_COMPILER_FLAGS_REPLACE}" ] ; then
for rep in ${SPACK_COMPILER_FLAGS_REPLACE} ; do
before=${rep%|*}
after=${rep#*|}
eval "\
stripped=\"\${1##$before}\"
"
if [ "$stripped" = "$1" ] ; then
continue
fi
if [ "$stripped" = "$1" ] ; then
continue
fi
replaced="$after$stripped"
replaced="$after$stripped"
# it matched, remove it
# it matched, remove it
shift
if [ -z "$replaced" ] ; then
# completely removed, continue OUTER loop
continue 2
fi
# re-build argument list with replacement
set -- "$replaced" "$@"
done
fi
case "$1" in
-isystem*)
arg="${1#-isystem}"
isystem_was_used=true
if [ -z "$arg" ]; then shift; arg="$1"; fi
if system_dir "$arg"; then
append isystem_system_include_dirs_list "$arg"
else
append isystem_include_dirs_list "$arg"
fi
;;
-I*)
arg="${1#-I}"
if [ -z "$arg" ]; then shift; arg="$1"; fi
if system_dir "$arg"; then
append system_include_dirs_list "$arg"
else
append include_dirs_list "$arg"
fi
;;
-L*)
arg="${1#-L}"
if [ -z "$arg" ]; then shift; arg="$1"; fi
if system_dir "$arg"; then
append system_lib_dirs_list "$arg"
else
append lib_dirs_list "$arg"
fi
;;
-l*)
# -loopopt=0 is generated erroneously in autoconf <= 2.69,
# and passed by ifx to the linker, which confuses it with a
# library. Filter it out.
# TODO: generalize filtering of args with an env var, so that
# TODO: we do not have to special case this here.
if { [ "$mode" = "ccld" ] || [ $mode = "ld" ]; } \
&& [ "$1" != "${1#-loopopt}" ]; then
shift
if [ -z "$replaced" ] ; then
# completely removed, continue OUTER loop
continue 2
fi
# re-build argument list with replacement
set -- "$replaced" "$@"
done
fi
case "$1" in
-isystem*)
arg="${1#-isystem}"
return_isystem_was_used=true
if [ -z "$arg" ]; then shift; arg="$1"; fi
if system_dir "$arg"; then
append return_isystem_system_include_dirs_list "$arg"
else
append return_isystem_include_dirs_list "$arg"
fi
;;
-I*)
arg="${1#-I}"
if [ -z "$arg" ]; then shift; arg="$1"; fi
if system_dir "$arg"; then
append return_system_include_dirs_list "$arg"
else
append return_include_dirs_list "$arg"
fi
;;
-L*)
arg="${1#-L}"
if [ -z "$arg" ]; then shift; arg="$1"; fi
if system_dir "$arg"; then
append return_system_lib_dirs_list "$arg"
else
append return_lib_dirs_list "$arg"
fi
;;
-l*)
# -loopopt=0 is generated erroneously in autoconf <= 2.69,
# and passed by ifx to the linker, which confuses it with a
# library. Filter it out.
# TODO: generalize filtering of args with an env var, so that
# TODO: we do not have to special case this here.
if { [ "$mode" = "ccld" ] || [ $mode = "ld" ]; } \
&& [ "$1" != "${1#-loopopt}" ]; then
shift
continue
fi
arg="${1#-l}"
if [ -z "$arg" ]; then shift; arg="$1"; fi
append return_other_args_list "-l$arg"
;;
-Wl,*)
IFS=,
if ! parse_Wl ${1#-Wl,}; then
append return_other_args_list "$1"
fi
unset IFS
;;
-Xlinker)
shift
if [ $# -eq 0 ]; then
# -Xlinker without value: let the compiler error about it.
append return_other_args_list -Xlinker
xlinker_expect_rpath=no
break
elif [ "$xlinker_expect_rpath" = yes ]; then
# Register the path of -Xlinker -rpath <other args> -Xlinker <path>
if system_dir "$1"; then
append return_system_rpath_dirs_list "$1"
else
append return_rpath_dirs_list "$1"
fi
xlinker_expect_rpath=no
else
case "$1" in
-rpath=*)
arg="${1#-rpath=}"
if system_dir "$arg"; then
append return_system_rpath_dirs_list "$arg"
else
append return_rpath_dirs_list "$arg"
fi
;;
--rpath=*)
arg="${1#--rpath=}"
if system_dir "$arg"; then
append return_system_rpath_dirs_list "$arg"
else
append return_rpath_dirs_list "$arg"
fi
;;
-rpath|--rpath)
xlinker_expect_rpath=yes
;;
"$dtags_to_strip")
continue
fi
arg="${1#-l}"
if [ -z "$arg" ]; then shift; arg="$1"; fi
append other_args_list "-l$arg"
;;
-Wl,*)
arg="${1#-Wl,}"
if [ -z "$arg" ]; then shift; arg="$1"; fi
case "$arg" in
-rpath=*) rp="${arg#-rpath=}" ;;
--rpath=*) rp="${arg#--rpath=}" ;;
-rpath,*) rp="${arg#-rpath,}" ;;
--rpath,*) rp="${arg#--rpath,}" ;;
-rpath|--rpath)
shift; arg="$1"
case "$arg" in
-Wl,*)
rp="${arg#-Wl,}"
;;
*)
append return_other_args_list -Xlinker
append return_other_args_list "$1"
die "-Wl,-rpath was not followed by -Wl,*"
;;
esac
;;
"$dtags_to_strip")
: # We want to remove explicitly this flag
;;
*)
append other_args_list "-Wl,$arg"
;;
esac
;;
-Xlinker,*)
arg="${1#-Xlinker,}"
if [ -z "$arg" ]; then shift; arg="$1"; fi
case "$arg" in
-rpath=*) rp="${arg#-rpath=}" ;;
--rpath=*) rp="${arg#--rpath=}" ;;
-rpath|--rpath)
shift; arg="$1"
case "$arg" in
-Xlinker,*)
rp="${arg#-Xlinker,}"
;;
*)
die "-Xlinker,-rpath was not followed by -Xlinker,*"
;;
esac
;;
*)
append other_args_list "-Xlinker,$arg"
;;
esac
;;
-Xlinker)
if [ "$2" = "-rpath" ]; then
if [ "$3" != "-Xlinker" ]; then
die "-Xlinker,-rpath was not followed by -Xlinker,*"
fi
;;
"$dtags_to_strip")
;;
*)
append return_other_args_list "$1"
;;
esac
shift
done
shift 3;
rp="$1"
elif [ "$2" = "$dtags_to_strip" ]; then
shift # We want to remove explicitly this flag
else
append other_args_list "$1"
fi
;;
*)
if [ "$1" = "$dtags_to_strip" ]; then
: # We want to remove explicitly this flag
else
append other_args_list "$1"
fi
;;
esac
# We found `-Xlinker -rpath` but no matching value `-Xlinker /path`. Just append
# `-Xlinker -rpath` again and let the compiler or linker handle the error during arg
# parsing.
if [ "$xlinker_expect_rpath" = yes ]; then
append return_other_args_list -Xlinker
append return_other_args_list -rpath
# test rpaths against system directories in one place.
if [ -n "$rp" ]; then
if system_dir "$rp"; then
append system_rpath_dirs_list "$rp"
else
append rpath_dirs_list "$rp"
fi
fi
# Same, but for -Wl flags.
if [ "$wl_expect_rpath" = yes ]; then
append return_other_args_list -Wl,-rpath
fi
}
categorize_arguments "$@"
include_dirs_list="$return_include_dirs_list"
lib_dirs_list="$return_lib_dirs_list"
rpath_dirs_list="$return_rpath_dirs_list"
system_include_dirs_list="$return_system_include_dirs_list"
system_lib_dirs_list="$return_system_lib_dirs_list"
system_rpath_dirs_list="$return_system_rpath_dirs_list"
isystem_was_used="$return_isystem_was_used"
isystem_system_include_dirs_list="$return_isystem_system_include_dirs_list"
isystem_include_dirs_list="$return_isystem_include_dirs_list"
other_args_list="$return_other_args_list"
shift
done
#
# Add flags from Spack's cppflags, cflags, cxxflags, fcflags, fflags, and
@@ -690,14 +626,12 @@ elif [ "$SPACK_ADD_DEBUG_FLAGS" = "custom" ]; then
extend flags_list SPACK_DEBUG_FLAGS
fi
spack_flags_list=""
# Fortran flags come before CPPFLAGS
case "$mode" in
cc|ccld)
case $lang_flags in
F)
extend spack_flags_list SPACK_FFLAGS
extend flags_list SPACK_FFLAGS
;;
esac
;;
@@ -706,7 +640,7 @@ esac
# C preprocessor flags come before any C/CXX flags
case "$mode" in
cpp|as|cc|ccld)
extend spack_flags_list SPACK_CPPFLAGS
extend flags_list SPACK_CPPFLAGS
;;
esac
@@ -716,10 +650,10 @@ case "$mode" in
cc|ccld)
case $lang_flags in
C)
extend spack_flags_list SPACK_CFLAGS
extend flags_list SPACK_CFLAGS
;;
CXX)
extend spack_flags_list SPACK_CXXFLAGS
extend flags_list SPACK_CXXFLAGS
;;
esac
@@ -731,25 +665,10 @@ esac
# Linker flags
case "$mode" in
ld|ccld)
extend spack_flags_list SPACK_LDFLAGS
extend flags_list SPACK_LDFLAGS
;;
esac
IFS="$lsep"
categorize_arguments $spack_flags_list
unset IFS
spack_flags_include_dirs_list="$return_include_dirs_list"
spack_flags_lib_dirs_list="$return_lib_dirs_list"
spack_flags_rpath_dirs_list="$return_rpath_dirs_list"
spack_flags_system_include_dirs_list="$return_system_include_dirs_list"
spack_flags_system_lib_dirs_list="$return_system_lib_dirs_list"
spack_flags_system_rpath_dirs_list="$return_system_rpath_dirs_list"
spack_flags_isystem_was_used="$return_isystem_was_used"
spack_flags_isystem_system_include_dirs_list="$return_isystem_system_include_dirs_list"
spack_flags_isystem_include_dirs_list="$return_isystem_include_dirs_list"
spack_flags_other_args_list="$return_other_args_list"
# On macOS insert headerpad_max_install_names linker flag
if [ "$mode" = ld ] || [ "$mode" = ccld ]; then
if [ "${SPACK_SHORT_SPEC#*darwin}" != "${SPACK_SHORT_SPEC}" ]; then
@@ -775,8 +694,6 @@ if [ "$mode" = ccld ] || [ "$mode" = ld ]; then
extend lib_dirs_list SPACK_LINK_DIRS
fi
libs_list=""
# add RPATHs if we're in in any linking mode
case "$mode" in
ld|ccld)
@@ -805,16 +722,12 @@ args_list="$flags_list"
# Insert include directories just prior to any system include directories
# NOTE: adding ${lsep} to the prefix here turns every added element into two
extend args_list spack_flags_include_dirs_list "-I"
extend args_list include_dirs_list "-I"
extend args_list spack_flags_isystem_include_dirs_list "-isystem${lsep}"
extend args_list isystem_include_dirs_list "-isystem${lsep}"
case "$mode" in
cpp|cc|as|ccld)
if [ "$spack_flags_isystem_was_used" = "true" ]; then
extend args_list SPACK_INCLUDE_DIRS "-isystem${lsep}"
elif [ "$isystem_was_used" = "true" ]; then
if [ "$isystem_was_used" = "true" ]; then
extend args_list SPACK_INCLUDE_DIRS "-isystem${lsep}"
else
extend args_list SPACK_INCLUDE_DIRS "-I"
@@ -822,15 +735,11 @@ case "$mode" in
;;
esac
extend args_list spack_flags_system_include_dirs_list -I
extend args_list system_include_dirs_list -I
extend args_list spack_flags_isystem_system_include_dirs_list "-isystem${lsep}"
extend args_list isystem_system_include_dirs_list "-isystem${lsep}"
# Library search paths
extend args_list spack_flags_lib_dirs_list "-L"
extend args_list lib_dirs_list "-L"
extend args_list spack_flags_system_lib_dirs_list "-L"
extend args_list system_lib_dirs_list "-L"
# RPATHs arguments
@@ -839,25 +748,20 @@ case "$mode" in
if [ -n "$dtags_to_add" ] ; then
append args_list "$linker_arg$dtags_to_add"
fi
extend args_list spack_flags_rpath_dirs_list "$rpath"
extend args_list rpath_dirs_list "$rpath"
extend args_list spack_flags_system_rpath_dirs_list "$rpath"
extend args_list system_rpath_dirs_list "$rpath"
;;
ld)
if [ -n "$dtags_to_add" ] ; then
append args_list "$dtags_to_add"
fi
extend args_list spack_flags_rpath_dirs_list "-rpath${lsep}"
extend args_list rpath_dirs_list "-rpath${lsep}"
extend args_list spack_flags_system_rpath_dirs_list "-rpath${lsep}"
extend args_list system_rpath_dirs_list "-rpath${lsep}"
;;
esac
# Other arguments from the input command
extend args_list other_args_list
extend args_list spack_flags_other_args_list
# Inject SPACK_LDLIBS, if supplied
extend args_list libs_list "-l"
@@ -913,4 +817,3 @@ fi
# Execute the full command, preserving spaces with IFS set
# to the alarm bell separator.
IFS="$lsep"; exec $full_command_list

View File

@@ -1,4 +1,4 @@
# Copyright 2013-2023 Lawrence Livermore National Security, LLC and other
# Copyright 2013-2022 Lawrence Livermore National Security, LLC and other
# Spack Project Developers. See the top-level COPYRIGHT file for details.
#
# SPDX-License-Identifier: (Apache-2.0 OR MIT)
@@ -11,14 +11,25 @@
* Homepage: https://altgraph.readthedocs.io/en/latest/index.html
* Usage: dependency of macholib
* Version: 0.17.3
* Version: 0.17.2
archspec
--------
* Homepage: https://pypi.python.org/pypi/archspec
* Usage: Labeling, comparison and detection of microarchitectures
* Version: 0.2.1 (commit df43a1834460bf94516136951c4729a3100603ec)
* Version: 0.2.0 (commit e44bad9c7b6defac73696f64078b2fe634719b62)
argparse
--------
* Homepage: https://pypi.python.org/pypi/argparse
* Usage: We include our own version to be Python 3.X compatible.
* Version: 1.4.0
* Note: This package has been slightly modified to improve
error message formatting. See the following commit if the
vendored copy ever needs to be updated again:
https://github.com/spack/spack/pull/6786/commits/dfcef577b77249106ea4e4c69a6cd9e64fa6c418
astunparse
----------------
@@ -41,7 +52,7 @@
* Homepage: https://github.com/python-attrs/attrs
* Usage: Needed by jsonschema.
* Version: 22.1.0
* Version: 21.2.0 (83d3cd70f90a3f4d19ee8b508e58d1c58821c0ad)
ctest_log_parser
----------------
@@ -56,14 +67,21 @@
* Homepage: https://pypi.python.org/pypi/distro
* Usage: Provides a more stable linux distribution detection.
* Version: 1.8.0
* Version: 1.6.0 (64946a1e2a9ff529047070657728600e006c99ff)
* Note: Last version supporting Python 2.7
functools32
-----------
* Homepage: https://github.com/MiCHiLU/python-functools32
* Usage: Needed by jsonschema when using Python 2.7.
* Version: 3.2.3-2
jinja2
------
* Homepage: https://pypi.python.org/pypi/Jinja2
* Usage: A modern and designer-friendly templating language for Python.
* Version: 3.0.3 (last version supporting Python 3.6)
* Version: 2.11.3 (last version supporting Python 2.7)
jsonschema
----------
@@ -78,21 +96,44 @@
* Homepage: https://macholib.readthedocs.io/en/latest/index.html#
* Usage: Manipulation of Mach-o binaries for relocating macOS buildcaches on Linux
* Version: 1.16.2
* Version: 1.15.2
markupsafe
----------
* Homepage: https://pypi.python.org/pypi/MarkupSafe
* Usage: Implements a XML/HTML/XHTML Markup safe string for Python.
* Version: 2.0.1 (last version supporting Python 3.6)
* Version: 1.1.1 (last version supporting Python 2.7)
py
--
* Homepage: https://pypi.python.org/pypi/py
* Usage: Needed by pytest. Library with cross-python path,
ini-parsing, io, code, and log facilities.
* Version: 1.4.34 (last version supporting Python 2.6)
* Note: This packages has been modified:
* https://github.com/pytest-dev/py/pull/186 was backported
pyrsistent
----------
* Homepage: http://github.com/tobgu/pyrsistent/
* Usage: Needed by `jsonschema`
* Version: 0.18.0
* Version: 0.16.1 (last version supporting Python 2.7)
* Note: We only include the parts needed for `jsonschema`.
pytest
------
* Homepage: https://pypi.python.org/pypi/pytest
* Usage: Testing framework used by Spack.
* Version: 3.2.5 (last version supporting Python 2.6)
* Note: This package has been slightly modified:
* We improve Python 2.6 compatibility. See:
https://github.com/spack/spack/pull/6801.
* We have patched pytest not to depend on setuptools. See:
https://github.com/spack/spack/pull/15612
ruamel.yaml
------
@@ -101,7 +142,10 @@
* Usage: Used for config files. Ruamel is based on PyYAML but is more
actively maintained and has more features, including round-tripping
comments read from config files.
* Version: 0.17.21
* Version: 0.11.15 (last version supporting Python 2.6)
* Note: This package has been slightly modified to improve Python 2.6
compatibility -- some ``{}`` format strings were replaced, and the
import for ``OrderedDict`` was tweaked.
six
---

View File

@@ -1 +0,0 @@
__version__ = '0.18.0'

View File

@@ -1 +0,0 @@
from _pyrsistent_version import *

View File

@@ -1 +0,0 @@
from altgraph import *

View File

@@ -1,18 +0,0 @@
Copyright (c) 2004 Istvan Albert unless otherwise noted.
Copyright (c) 2006-2010 Bob Ippolito
Copyright (2) 2010-2020 Ronald Oussoren, et. al.
Permission is hereby granted, free of charge, to any person obtaining a copy
of this software and associated documentation files (the "Software"), to
deal in the Software without restriction, including without limitation the
rights to use, copy, modify, merge, publish, distribute, sublicense,
and/or sell copies of the Software, and to permit persons to whom the
Software is furnished to do so.
THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR
IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,
FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE
AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER
LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING
FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS
IN THE SOFTWARE.

View File

@@ -1,486 +0,0 @@
import sys
from typing import (
Any,
Callable,
ClassVar,
Dict,
Generic,
List,
Mapping,
Optional,
Protocol,
Sequence,
Tuple,
Type,
TypeVar,
Union,
overload,
)
# `import X as X` is required to make these public
from . import converters as converters
from . import exceptions as exceptions
from . import filters as filters
from . import setters as setters
from . import validators as validators
from ._cmp import cmp_using as cmp_using
from ._version_info import VersionInfo
__version__: str
__version_info__: VersionInfo
__title__: str
__description__: str
__url__: str
__uri__: str
__author__: str
__email__: str
__license__: str
__copyright__: str
_T = TypeVar("_T")
_C = TypeVar("_C", bound=type)
_EqOrderType = Union[bool, Callable[[Any], Any]]
_ValidatorType = Callable[[Any, Attribute[_T], _T], Any]
_ConverterType = Callable[[Any], Any]
_FilterType = Callable[[Attribute[_T], _T], bool]
_ReprType = Callable[[Any], str]
_ReprArgType = Union[bool, _ReprType]
_OnSetAttrType = Callable[[Any, Attribute[Any], Any], Any]
_OnSetAttrArgType = Union[
_OnSetAttrType, List[_OnSetAttrType], setters._NoOpType
]
_FieldTransformer = Callable[
[type, List[Attribute[Any]]], List[Attribute[Any]]
]
# FIXME: in reality, if multiple validators are passed they must be in a list
# or tuple, but those are invariant and so would prevent subtypes of
# _ValidatorType from working when passed in a list or tuple.
_ValidatorArgType = Union[_ValidatorType[_T], Sequence[_ValidatorType[_T]]]
# A protocol to be able to statically accept an attrs class.
class AttrsInstance(Protocol):
__attrs_attrs__: ClassVar[Any]
# _make --
NOTHING: object
# NOTE: Factory lies about its return type to make this possible:
# `x: List[int] # = Factory(list)`
# Work around mypy issue #4554 in the common case by using an overload.
if sys.version_info >= (3, 8):
from typing import Literal
@overload
def Factory(factory: Callable[[], _T]) -> _T: ...
@overload
def Factory(
factory: Callable[[Any], _T],
takes_self: Literal[True],
) -> _T: ...
@overload
def Factory(
factory: Callable[[], _T],
takes_self: Literal[False],
) -> _T: ...
else:
@overload
def Factory(factory: Callable[[], _T]) -> _T: ...
@overload
def Factory(
factory: Union[Callable[[Any], _T], Callable[[], _T]],
takes_self: bool = ...,
) -> _T: ...
# Static type inference support via __dataclass_transform__ implemented as per:
# https://github.com/microsoft/pyright/blob/1.1.135/specs/dataclass_transforms.md
# This annotation must be applied to all overloads of "define" and "attrs"
#
# NOTE: This is a typing construct and does not exist at runtime. Extensions
# wrapping attrs decorators should declare a separate __dataclass_transform__
# signature in the extension module using the specification linked above to
# provide pyright support.
def __dataclass_transform__(
*,
eq_default: bool = True,
order_default: bool = False,
kw_only_default: bool = False,
field_descriptors: Tuple[Union[type, Callable[..., Any]], ...] = (()),
) -> Callable[[_T], _T]: ...
class Attribute(Generic[_T]):
name: str
default: Optional[_T]
validator: Optional[_ValidatorType[_T]]
repr: _ReprArgType
cmp: _EqOrderType
eq: _EqOrderType
order: _EqOrderType
hash: Optional[bool]
init: bool
converter: Optional[_ConverterType]
metadata: Dict[Any, Any]
type: Optional[Type[_T]]
kw_only: bool
on_setattr: _OnSetAttrType
def evolve(self, **changes: Any) -> "Attribute[Any]": ...
# NOTE: We had several choices for the annotation to use for type arg:
# 1) Type[_T]
# - Pros: Handles simple cases correctly
# - Cons: Might produce less informative errors in the case of conflicting
# TypeVars e.g. `attr.ib(default='bad', type=int)`
# 2) Callable[..., _T]
# - Pros: Better error messages than #1 for conflicting TypeVars
# - Cons: Terrible error messages for validator checks.
# e.g. attr.ib(type=int, validator=validate_str)
# -> error: Cannot infer function type argument
# 3) type (and do all of the work in the mypy plugin)
# - Pros: Simple here, and we could customize the plugin with our own errors.
# - Cons: Would need to write mypy plugin code to handle all the cases.
# We chose option #1.
# `attr` lies about its return type to make the following possible:
# attr() -> Any
# attr(8) -> int
# attr(validator=<some callable>) -> Whatever the callable expects.
# This makes this type of assignments possible:
# x: int = attr(8)
#
# This form catches explicit None or no default but with no other arguments
# returns Any.
@overload
def attrib(
default: None = ...,
validator: None = ...,
repr: _ReprArgType = ...,
cmp: Optional[_EqOrderType] = ...,
hash: Optional[bool] = ...,
init: bool = ...,
metadata: Optional[Mapping[Any, Any]] = ...,
type: None = ...,
converter: None = ...,
factory: None = ...,
kw_only: bool = ...,
eq: Optional[_EqOrderType] = ...,
order: Optional[_EqOrderType] = ...,
on_setattr: Optional[_OnSetAttrArgType] = ...,
) -> Any: ...
# This form catches an explicit None or no default and infers the type from the
# other arguments.
@overload
def attrib(
default: None = ...,
validator: Optional[_ValidatorArgType[_T]] = ...,
repr: _ReprArgType = ...,
cmp: Optional[_EqOrderType] = ...,
hash: Optional[bool] = ...,
init: bool = ...,
metadata: Optional[Mapping[Any, Any]] = ...,
type: Optional[Type[_T]] = ...,
converter: Optional[_ConverterType] = ...,
factory: Optional[Callable[[], _T]] = ...,
kw_only: bool = ...,
eq: Optional[_EqOrderType] = ...,
order: Optional[_EqOrderType] = ...,
on_setattr: Optional[_OnSetAttrArgType] = ...,
) -> _T: ...
# This form catches an explicit default argument.
@overload
def attrib(
default: _T,
validator: Optional[_ValidatorArgType[_T]] = ...,
repr: _ReprArgType = ...,
cmp: Optional[_EqOrderType] = ...,
hash: Optional[bool] = ...,
init: bool = ...,
metadata: Optional[Mapping[Any, Any]] = ...,
type: Optional[Type[_T]] = ...,
converter: Optional[_ConverterType] = ...,
factory: Optional[Callable[[], _T]] = ...,
kw_only: bool = ...,
eq: Optional[_EqOrderType] = ...,
order: Optional[_EqOrderType] = ...,
on_setattr: Optional[_OnSetAttrArgType] = ...,
) -> _T: ...
# This form covers type=non-Type: e.g. forward references (str), Any
@overload
def attrib(
default: Optional[_T] = ...,
validator: Optional[_ValidatorArgType[_T]] = ...,
repr: _ReprArgType = ...,
cmp: Optional[_EqOrderType] = ...,
hash: Optional[bool] = ...,
init: bool = ...,
metadata: Optional[Mapping[Any, Any]] = ...,
type: object = ...,
converter: Optional[_ConverterType] = ...,
factory: Optional[Callable[[], _T]] = ...,
kw_only: bool = ...,
eq: Optional[_EqOrderType] = ...,
order: Optional[_EqOrderType] = ...,
on_setattr: Optional[_OnSetAttrArgType] = ...,
) -> Any: ...
@overload
def field(
*,
default: None = ...,
validator: None = ...,
repr: _ReprArgType = ...,
hash: Optional[bool] = ...,
init: bool = ...,
metadata: Optional[Mapping[Any, Any]] = ...,
converter: None = ...,
factory: None = ...,
kw_only: bool = ...,
eq: Optional[bool] = ...,
order: Optional[bool] = ...,
on_setattr: Optional[_OnSetAttrArgType] = ...,
) -> Any: ...
# This form catches an explicit None or no default and infers the type from the
# other arguments.
@overload
def field(
*,
default: None = ...,
validator: Optional[_ValidatorArgType[_T]] = ...,
repr: _ReprArgType = ...,
hash: Optional[bool] = ...,
init: bool = ...,
metadata: Optional[Mapping[Any, Any]] = ...,
converter: Optional[_ConverterType] = ...,
factory: Optional[Callable[[], _T]] = ...,
kw_only: bool = ...,
eq: Optional[_EqOrderType] = ...,
order: Optional[_EqOrderType] = ...,
on_setattr: Optional[_OnSetAttrArgType] = ...,
) -> _T: ...
# This form catches an explicit default argument.
@overload
def field(
*,
default: _T,
validator: Optional[_ValidatorArgType[_T]] = ...,
repr: _ReprArgType = ...,
hash: Optional[bool] = ...,
init: bool = ...,
metadata: Optional[Mapping[Any, Any]] = ...,
converter: Optional[_ConverterType] = ...,
factory: Optional[Callable[[], _T]] = ...,
kw_only: bool = ...,
eq: Optional[_EqOrderType] = ...,
order: Optional[_EqOrderType] = ...,
on_setattr: Optional[_OnSetAttrArgType] = ...,
) -> _T: ...
# This form covers type=non-Type: e.g. forward references (str), Any
@overload
def field(
*,
default: Optional[_T] = ...,
validator: Optional[_ValidatorArgType[_T]] = ...,
repr: _ReprArgType = ...,
hash: Optional[bool] = ...,
init: bool = ...,
metadata: Optional[Mapping[Any, Any]] = ...,
converter: Optional[_ConverterType] = ...,
factory: Optional[Callable[[], _T]] = ...,
kw_only: bool = ...,
eq: Optional[_EqOrderType] = ...,
order: Optional[_EqOrderType] = ...,
on_setattr: Optional[_OnSetAttrArgType] = ...,
) -> Any: ...
@overload
@__dataclass_transform__(order_default=True, field_descriptors=(attrib, field))
def attrs(
maybe_cls: _C,
these: Optional[Dict[str, Any]] = ...,
repr_ns: Optional[str] = ...,
repr: bool = ...,
cmp: Optional[_EqOrderType] = ...,
hash: Optional[bool] = ...,
init: bool = ...,
slots: bool = ...,
frozen: bool = ...,
weakref_slot: bool = ...,
str: bool = ...,
auto_attribs: bool = ...,
kw_only: bool = ...,
cache_hash: bool = ...,
auto_exc: bool = ...,
eq: Optional[_EqOrderType] = ...,
order: Optional[_EqOrderType] = ...,
auto_detect: bool = ...,
collect_by_mro: bool = ...,
getstate_setstate: Optional[bool] = ...,
on_setattr: Optional[_OnSetAttrArgType] = ...,
field_transformer: Optional[_FieldTransformer] = ...,
match_args: bool = ...,
) -> _C: ...
@overload
@__dataclass_transform__(order_default=True, field_descriptors=(attrib, field))
def attrs(
maybe_cls: None = ...,
these: Optional[Dict[str, Any]] = ...,
repr_ns: Optional[str] = ...,
repr: bool = ...,
cmp: Optional[_EqOrderType] = ...,
hash: Optional[bool] = ...,
init: bool = ...,
slots: bool = ...,
frozen: bool = ...,
weakref_slot: bool = ...,
str: bool = ...,
auto_attribs: bool = ...,
kw_only: bool = ...,
cache_hash: bool = ...,
auto_exc: bool = ...,
eq: Optional[_EqOrderType] = ...,
order: Optional[_EqOrderType] = ...,
auto_detect: bool = ...,
collect_by_mro: bool = ...,
getstate_setstate: Optional[bool] = ...,
on_setattr: Optional[_OnSetAttrArgType] = ...,
field_transformer: Optional[_FieldTransformer] = ...,
match_args: bool = ...,
) -> Callable[[_C], _C]: ...
@overload
@__dataclass_transform__(field_descriptors=(attrib, field))
def define(
maybe_cls: _C,
*,
these: Optional[Dict[str, Any]] = ...,
repr: bool = ...,
hash: Optional[bool] = ...,
init: bool = ...,
slots: bool = ...,
frozen: bool = ...,
weakref_slot: bool = ...,
str: bool = ...,
auto_attribs: bool = ...,
kw_only: bool = ...,
cache_hash: bool = ...,
auto_exc: bool = ...,
eq: Optional[bool] = ...,
order: Optional[bool] = ...,
auto_detect: bool = ...,
getstate_setstate: Optional[bool] = ...,
on_setattr: Optional[_OnSetAttrArgType] = ...,
field_transformer: Optional[_FieldTransformer] = ...,
match_args: bool = ...,
) -> _C: ...
@overload
@__dataclass_transform__(field_descriptors=(attrib, field))
def define(
maybe_cls: None = ...,
*,
these: Optional[Dict[str, Any]] = ...,
repr: bool = ...,
hash: Optional[bool] = ...,
init: bool = ...,
slots: bool = ...,
frozen: bool = ...,
weakref_slot: bool = ...,
str: bool = ...,
auto_attribs: bool = ...,
kw_only: bool = ...,
cache_hash: bool = ...,
auto_exc: bool = ...,
eq: Optional[bool] = ...,
order: Optional[bool] = ...,
auto_detect: bool = ...,
getstate_setstate: Optional[bool] = ...,
on_setattr: Optional[_OnSetAttrArgType] = ...,
field_transformer: Optional[_FieldTransformer] = ...,
match_args: bool = ...,
) -> Callable[[_C], _C]: ...
mutable = define
frozen = define # they differ only in their defaults
def fields(cls: Type[AttrsInstance]) -> Any: ...
def fields_dict(cls: Type[AttrsInstance]) -> Dict[str, Attribute[Any]]: ...
def validate(inst: AttrsInstance) -> None: ...
def resolve_types(
cls: _C,
globalns: Optional[Dict[str, Any]] = ...,
localns: Optional[Dict[str, Any]] = ...,
attribs: Optional[List[Attribute[Any]]] = ...,
) -> _C: ...
# TODO: add support for returning a proper attrs class from the mypy plugin
# we use Any instead of _CountingAttr so that e.g. `make_class('Foo',
# [attr.ib()])` is valid
def make_class(
name: str,
attrs: Union[List[str], Tuple[str, ...], Dict[str, Any]],
bases: Tuple[type, ...] = ...,
repr_ns: Optional[str] = ...,
repr: bool = ...,
cmp: Optional[_EqOrderType] = ...,
hash: Optional[bool] = ...,
init: bool = ...,
slots: bool = ...,
frozen: bool = ...,
weakref_slot: bool = ...,
str: bool = ...,
auto_attribs: bool = ...,
kw_only: bool = ...,
cache_hash: bool = ...,
auto_exc: bool = ...,
eq: Optional[_EqOrderType] = ...,
order: Optional[_EqOrderType] = ...,
collect_by_mro: bool = ...,
on_setattr: Optional[_OnSetAttrArgType] = ...,
field_transformer: Optional[_FieldTransformer] = ...,
) -> type: ...
# _funcs --
# TODO: add support for returning TypedDict from the mypy plugin
# FIXME: asdict/astuple do not honor their factory args. Waiting on one of
# these:
# https://github.com/python/mypy/issues/4236
# https://github.com/python/typing/issues/253
# XXX: remember to fix attrs.asdict/astuple too!
def asdict(
inst: AttrsInstance,
recurse: bool = ...,
filter: Optional[_FilterType[Any]] = ...,
dict_factory: Type[Mapping[Any, Any]] = ...,
retain_collection_types: bool = ...,
value_serializer: Optional[
Callable[[type, Attribute[Any], Any], Any]
] = ...,
tuple_keys: Optional[bool] = ...,
) -> Dict[str, Any]: ...
# TODO: add support for returning NamedTuple from the mypy plugin
def astuple(
inst: AttrsInstance,
recurse: bool = ...,
filter: Optional[_FilterType[Any]] = ...,
tuple_factory: Type[Sequence[Any]] = ...,
retain_collection_types: bool = ...,
) -> Tuple[Any, ...]: ...
def has(cls: type) -> bool: ...
def assoc(inst: _T, **changes: Any) -> _T: ...
def evolve(inst: _T, **changes: Any) -> _T: ...
# _config --
def set_run_validators(run: bool) -> None: ...
def get_run_validators() -> bool: ...
# aliases --
s = attributes = attrs
ib = attr = attrib
dataclass = attrs # Technically, partial(attrs, auto_attribs=True) ;)

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@@ -1,13 +0,0 @@
from typing import Any, Callable, Optional, Type
_CompareWithType = Callable[[Any, Any], bool]
def cmp_using(
eq: Optional[_CompareWithType],
lt: Optional[_CompareWithType],
le: Optional[_CompareWithType],
gt: Optional[_CompareWithType],
ge: Optional[_CompareWithType],
require_same_type: bool,
class_name: str,
) -> Type: ...

View File

@@ -1,185 +0,0 @@
# SPDX-License-Identifier: MIT
import inspect
import platform
import sys
import threading
import types
import warnings
from collections.abc import Mapping, Sequence # noqa
PYPY = platform.python_implementation() == "PyPy"
PY36 = sys.version_info[:2] >= (3, 6)
HAS_F_STRINGS = PY36
PY310 = sys.version_info[:2] >= (3, 10)
if PYPY or PY36:
ordered_dict = dict
else:
from collections import OrderedDict
ordered_dict = OrderedDict
def just_warn(*args, **kw):
warnings.warn(
"Running interpreter doesn't sufficiently support code object "
"introspection. Some features like bare super() or accessing "
"__class__ will not work with slotted classes.",
RuntimeWarning,
stacklevel=2,
)
class _AnnotationExtractor:
"""
Extract type annotations from a callable, returning None whenever there
is none.
"""
__slots__ = ["sig"]
def __init__(self, callable):
try:
self.sig = inspect.signature(callable)
except (ValueError, TypeError): # inspect failed
self.sig = None
def get_first_param_type(self):
"""
Return the type annotation of the first argument if it's not empty.
"""
if not self.sig:
return None
params = list(self.sig.parameters.values())
if params and params[0].annotation is not inspect.Parameter.empty:
return params[0].annotation
return None
def get_return_type(self):
"""
Return the return type if it's not empty.
"""
if (
self.sig
and self.sig.return_annotation is not inspect.Signature.empty
):
return self.sig.return_annotation
return None
def make_set_closure_cell():
"""Return a function of two arguments (cell, value) which sets
the value stored in the closure cell `cell` to `value`.
"""
# pypy makes this easy. (It also supports the logic below, but
# why not do the easy/fast thing?)
if PYPY:
def set_closure_cell(cell, value):
cell.__setstate__((value,))
return set_closure_cell
# Otherwise gotta do it the hard way.
# Create a function that will set its first cellvar to `value`.
def set_first_cellvar_to(value):
x = value
return
# This function will be eliminated as dead code, but
# not before its reference to `x` forces `x` to be
# represented as a closure cell rather than a local.
def force_x_to_be_a_cell(): # pragma: no cover
return x
try:
# Extract the code object and make sure our assumptions about
# the closure behavior are correct.
co = set_first_cellvar_to.__code__
if co.co_cellvars != ("x",) or co.co_freevars != ():
raise AssertionError # pragma: no cover
# Convert this code object to a code object that sets the
# function's first _freevar_ (not cellvar) to the argument.
if sys.version_info >= (3, 8):
def set_closure_cell(cell, value):
cell.cell_contents = value
else:
args = [co.co_argcount]
args.append(co.co_kwonlyargcount)
args.extend(
[
co.co_nlocals,
co.co_stacksize,
co.co_flags,
co.co_code,
co.co_consts,
co.co_names,
co.co_varnames,
co.co_filename,
co.co_name,
co.co_firstlineno,
co.co_lnotab,
# These two arguments are reversed:
co.co_cellvars,
co.co_freevars,
]
)
set_first_freevar_code = types.CodeType(*args)
def set_closure_cell(cell, value):
# Create a function using the set_first_freevar_code,
# whose first closure cell is `cell`. Calling it will
# change the value of that cell.
setter = types.FunctionType(
set_first_freevar_code, {}, "setter", (), (cell,)
)
# And call it to set the cell.
setter(value)
# Make sure it works on this interpreter:
def make_func_with_cell():
x = None
def func():
return x # pragma: no cover
return func
cell = make_func_with_cell().__closure__[0]
set_closure_cell(cell, 100)
if cell.cell_contents != 100:
raise AssertionError # pragma: no cover
except Exception:
return just_warn
else:
return set_closure_cell
set_closure_cell = make_set_closure_cell()
# Thread-local global to track attrs instances which are already being repr'd.
# This is needed because there is no other (thread-safe) way to pass info
# about the instances that are already being repr'd through the call stack
# in order to ensure we don't perform infinite recursion.
#
# For instance, if an instance contains a dict which contains that instance,
# we need to know that we're already repr'ing the outside instance from within
# the dict's repr() call.
#
# This lives here rather than in _make.py so that the functions in _make.py
# don't have a direct reference to the thread-local in their globals dict.
# If they have such a reference, it breaks cloudpickle.
repr_context = threading.local()

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@@ -1,9 +0,0 @@
class VersionInfo:
@property
def year(self) -> int: ...
@property
def minor(self) -> int: ...
@property
def micro(self) -> int: ...
@property
def releaselevel(self) -> str: ...

View File

@@ -1,13 +0,0 @@
from typing import Callable, Optional, TypeVar, overload
from . import _ConverterType
_T = TypeVar("_T")
def pipe(*validators: _ConverterType) -> _ConverterType: ...
def optional(converter: _ConverterType) -> _ConverterType: ...
@overload
def default_if_none(default: _T) -> _ConverterType: ...
@overload
def default_if_none(*, factory: Callable[[], _T]) -> _ConverterType: ...
def to_bool(val: str) -> bool: ...

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