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81 Commits

Author SHA1 Message Date
Massimiliano Culpo
0cdece73b8 Update version number 2025-01-13 10:51:12 +01:00
Massimiliano Culpo
d8447a4c28 libtheora: fix access to mc=svc package 2025-01-13 10:09:54 +01:00
Massimiliano Culpo
e9f537fcde gromacs: add dependency on fortran when +cp2k 2025-01-11 14:40:27 +01:00
Massimiliano Culpo
fc683b87f1 builtin: reduce boilerplate when accessing package attributes 2025-01-11 14:40:27 +01:00
Massimiliano Culpo
337ab120b3 Spec: relax a few type-hints to accept a Sequence 2025-01-11 14:40:26 +01:00
Massimiliano Culpo
8f1be225dd Executable: allow also pathlib.Path in constructor 2025-01-11 14:40:24 +01:00
Massimiliano Culpo
dc96b3cbc1 Flatten the default store projection 2025-01-11 13:57:56 +01:00
Massimiliano Culpo
c43673f63b Write repo caches in specfile specific files
In this way we'll never encounter weird errors, when bumping the
specfile version. There are other unrelated issues with repo caches,
but those can be resolved separately.
2025-01-11 13:57:55 +01:00
Massimiliano Culpo
791c35ae5b Update command completion
Signed-off-by: Massimiliano Culpo <massimiliano.culpo@gmail.com>
2025-01-11 13:57:55 +01:00
Massimiliano Culpo
ca6f74d3bf (to be removed) Make spack unit test runnable 2025-01-11 13:57:54 +01:00
Massimiliano Culpo
8b2809b4ac intel-oneapi-mpi: fix setting up dependent build environment 2025-01-11 13:57:54 +01:00
Massimiliano Culpo
179a05bc5b otf2: add a dependency on Fortran
See https://gitlab.spack.io/spack/spack/-/jobs/14423941

From https://gitlab.com/score-p/scorep/-/blob/master/INSTALL?ref_type=heads

> Score-P requires a full compiler suite with language support for C99,
> C++11 and optionally Fortran 77 and Fortran 90.
2025-01-11 13:57:53 +01:00
Massimiliano Culpo
5f808db261 netlib-lapack: add dependency on cxx
See https://gitlab.spack.io/spack/spack/-/jobs/14376518
2025-01-11 13:57:53 +01:00
Massimiliano Culpo
b38ab78765 Use a stub compiler wrapper on windows 2025-01-11 13:57:53 +01:00
Massimiliano Culpo
7841978488 Turn the compiler wrapper into a package
Remove the compiler wrappers from core Spack, and move
the relevant code into the "compiler-wrapper" package.
2025-01-11 13:57:52 +01:00
Massimiliano Culpo
396d7ab2a9 (To be revisited) builtin: add cc, cxx, and fortran properties
These properties are implemented in the same way in each compiler
package, at least for external specs. So, push the implementation
to the base class for now.

This needs to be revisited, to make the base class less dependent
on C, C++, and Fortran.
2025-01-11 13:57:52 +01:00
Massimiliano Culpo
d0d77d253d (To be revisited) compiler: add cc, cxx, and fortran properties
These properties are implemented in the same way in each compiler
package, at least for external specs. So, push the implementation
to the base class for now.

This needs to be revisited, to make the base class less dependent
on C, C++, and Fortran.
2025-01-11 13:57:51 +01:00
Massimiliano Culpo
762d4fd7d5 Fix print in spack compiler info 2025-01-11 13:57:51 +01:00
Harmen Stoppels
90d2034d8b delete redundant spack.concretize.CHECK_COMPILER_EXISTENCE 2025-01-11 13:57:50 +01:00
Massimiliano Culpo
f1958fbd7e Raise UnsupportedCompilerFlag when a flag is not supported 2025-01-11 13:57:50 +01:00
Massimiliano Culpo
254f5c920b Remove SPACK_COMPILER_SPEC from the environment 2025-01-11 13:57:50 +01:00
Massimiliano Culpo
23bd090436 (TO BE REMOVED) pipelines: "tee" configuration, for better logging 2025-01-11 13:57:49 +01:00
Massimiliano Culpo
19a4171c38 pipelines: update devtools-aarch64 2025-01-11 13:57:49 +01:00
Massimiliano Culpo
d3176767a0 pipelines: relax requirements on e4s-oneapi 2025-01-11 13:57:48 +01:00
Massimiliano Culpo
41bb68a623 Update pipeline configurations
Signed-off-by: Massimiliano Culpo <massimiliano.culpo@gmail.com>
2025-01-11 13:57:48 +01:00
Massimiliano Culpo
eaf4483db7 Prepend compiler wrappers path last, so we don't risk finding externals 2025-01-11 13:57:47 +01:00
Massimiliano Culpo
37704c5708 solver: temporarily enforce compilers to be externals 2025-01-11 13:57:47 +01:00
Massimiliano Culpo
de24715e05 Remove rule already accounted for by the gcc package 2025-01-11 13:57:47 +01:00
Massimiliano Culpo
35dea05048 dyninst: add missing dependencies 2025-01-11 13:57:46 +01:00
Massimiliano Culpo
a69cf5b9ad builtin: minimal fix for _get_host_config_path 2025-01-11 13:57:46 +01:00
Massimiliano Culpo
1da005f6bd mpich, openmpi: fix setting up dependent build environment 2025-01-11 13:57:45 +01:00
Massimiliano Culpo
787f7d7729 builtin: fix for Windows pipelines 2025-01-11 13:57:45 +01:00
Massimiliano Culpo
bb90d02d90 builtin: changes to packages 2025-01-11 13:57:44 +01:00
Massimiliano Culpo
cf34db4676 Allow different target flags for different compilers 2025-01-11 13:57:44 +01:00
Massimiliano Culpo
bddd41aa26 unit-test: make Spec.compiler behavior stricter
Now the adaptor will raise if the Spec has no C, C++,
or Fortran compiler.
2025-01-11 13:57:43 +01:00
Massimiliano Culpo
db2d077e2c Remove a test that should fail according to concretization rules 2025-01-11 13:57:43 +01:00
Massimiliano Culpo
8f96ac3d03 Add a unit-test for satisfies and __getitem__ semantic 2025-01-11 13:57:43 +01:00
Massimiliano Culpo
2fd89f7e59 Add a unit-test for compiler self-dependencies 2025-01-11 13:57:42 +01:00
Massimiliano Culpo
c6fb85eed5 Exempt "compilers" and "runtimes" from default requirements 2025-01-11 13:57:42 +01:00
Massimiliano Culpo
33cf8d3f5e unit-tests: mark a few tests as xfail, or skip, for now
Signed-off-by: Massimiliano Culpo <massimiliano.culpo@gmail.com>
2025-01-11 13:57:41 +01:00
Massimiliano Culpo
c595a7008d Fix setting SPACK_TARGET_ARGS for concrete specs 2025-01-11 13:57:41 +01:00
Massimiliano Culpo
591b659242 unit-test: fix reading Cray manifest files 2025-01-11 13:57:40 +01:00
Massimiliano Culpo
99d8f2ddbd unit-tests: fix most unit tests to account for the new model
Signed-off-by: Massimiliano Culpo <massimiliano.culpo@gmail.com>
2025-01-11 13:57:40 +01:00
Massimiliano Culpo
673703a17d Fix setting SPACK_TARGET_ARGS for concrete specs 2025-01-11 13:57:39 +01:00
Massimiliano Culpo
2017dfea4c Fix concretization of julia
That package depends on llvm as a library, and the rule on compatible
targets for compilers was getting in the way.
2025-01-11 13:57:39 +01:00
Massimiliano Culpo
df464681bf Modify Spec.short_spec to remove compiler info 2025-01-11 13:57:38 +01:00
Massimiliano Culpo
b6ce34607e Make Spec.compiler behavior stricter
Now the adaptor will raise if the Spec has no C, C++,
or Fortran compiler.
2025-01-11 13:57:38 +01:00
Massimiliano Culpo
10479101fa asp: fix intel-oneapi-compilers-classic 2025-01-11 13:57:38 +01:00
Massimiliano Culpo
eb270afa0c Spec.__contains__: traverse only lin/run + direct build 2025-01-11 13:57:34 +01:00
Massimiliano Culpo
7edcc4da88 Exempt "compilers" and "runtimes" from default requirements 2025-01-11 13:29:02 +01:00
Massimiliano Culpo
a316f23d79 Allow self concretization to bootstrap compilers 2025-01-11 13:29:02 +01:00
Massimiliano Culpo
92d96d747c Add more constraint to providers 2025-01-11 13:29:01 +01:00
Massimiliano Culpo
96b54ec59c Fix for duplicate glibc in concretization 2025-01-11 13:29:01 +01:00
Massimiliano Culpo
da06ad3303 Improve reporting when bootstrapping from source
Signed-off-by: Massimiliano Culpo <massimiliano.culpo@gmail.com>
2025-01-11 13:29:00 +01:00
Massimiliano Culpo
058e19458d Improve error messages for statically checked specs
Signed-off-by: Massimiliano Culpo <massimiliano.culpo@gmail.com>
2025-01-11 13:29:00 +01:00
Massimiliano Culpo
575483d041 spec: implemented direct satisfy semantic
Signed-off-by: Massimiliano Culpo <massimiliano.culpo@gmail.com>
2025-01-11 13:28:59 +01:00
Massimiliano Culpo
e6729320f7 Fixup binary cache reuse
Signed-off-by: Massimiliano Culpo <massimiliano.culpo@gmail.com>
2025-01-11 13:28:59 +01:00
Massimiliano Culpo
9ca0bd5d97 Write adaptors for CompilerSpec and Compiler
Signed-off-by: Massimiliano Culpo <massimiliano.culpo@gmail.com>
2025-01-11 13:28:59 +01:00
Massimiliano Culpo
cdc8236169 Make BaseConfiguration pickleable
Signed-off-by: Massimiliano Culpo <massimiliano.culpo@gmail.com>
2025-01-11 13:28:58 +01:00
Massimiliano Culpo
f8ab75244b Fix reading Cray manifest files
Signed-off-by: Massimiliano Culpo <massimiliano.culpo@gmail.com>
2025-01-11 13:28:58 +01:00
Massimiliano Culpo
f211789087 (WIP) Fix LMod module generation
Signed-off-by: Massimiliano Culpo <massimiliano.culpo@gmail.com>
2025-01-11 13:28:57 +01:00
Massimiliano Culpo
09ccccbec5 (WIP) Remove deprecated argument for Spec.format
Signed-off-by: Massimiliano Culpo <massimiliano.culpo@gmail.com>
2025-01-11 13:28:57 +01:00
Massimiliano Culpo
45e1573a17 fixup: spec copies compiler annotation
Signed-off-by: Massimiliano Culpo <massimiliano.culpo@gmail.com>
2025-01-11 13:28:56 +01:00
Massimiliano Culpo
352442a383 Restore bootstrapping from binaries
Signed-off-by: Massimiliano Culpo <massimiliano.culpo@gmail.com>
2025-01-11 13:28:56 +01:00
Massimiliano Culpo
543f830f57 Restore bootstrapping from sources
Signed-off-by: Massimiliano Culpo <massimiliano.culpo@gmail.com>
2025-01-11 13:28:55 +01:00
Massimiliano Culpo
94fdd3dc5b spec: change semantic of __getitem__
Now __getitem__ can pick items in the transitive link/run graph,
or from direct build dependencies.

Signed-off-by: Massimiliano Culpo <massimiliano.culpo@gmail.com>
2025-01-11 13:28:55 +01:00
Massimiliano Culpo
403e2db50f spec: bump specfile format to v5
Signed-off-by: Massimiliano Culpo <massimiliano.culpo@gmail.com>
2025-01-11 13:28:54 +01:00
Massimiliano Culpo
7832c56537 Overhaul of the spack.compilers package
Now the package contains modules that help using, or
detecting, compiler packages.

Signed-off-by: Massimiliano Culpo <massimiliano.culpo@gmail.com>
2025-01-11 13:28:54 +01:00
Massimiliano Culpo
bec58a1554 Remove spack.compilers Python modules
Signed-off-by: Massimiliano Culpo <massimiliano.culpo@gmail.com>
2025-01-11 13:28:53 +01:00
Massimiliano Culpo
67b04f1b8d (WIP) Install mechanism 2025-01-11 13:28:53 +01:00
Massimiliano Culpo
8c66a1699e (WIP) Recover bootstrapping from binaries on linux 2025-01-11 13:28:52 +01:00
Massimiliano Culpo
86a8ec5bbc unit-tests: fix concretization and spack compiler tests 2025-01-11 13:28:52 +01:00
Massimiliano Culpo
4f9be7b00a builtin.mock et al. : changes to packages
Signed-off-by: Massimiliano Culpo <massimiliano.culpo@gmail.com>
2025-01-11 13:28:51 +01:00
Massimiliano Culpo
dc7df70b81 solver: first working implementation of compiler as nodes
This commit changes the model to treat compilers as nodes, and
drops the concept of a "compiler" as a bundle of a C, C++, and
Fortran compiler.

Implementation does not rely on `Compiler` or `CompilerSpec`.
2025-01-11 13:28:51 +01:00
Massimiliano Culpo
6f5e6f3a5b Deprecate packages:all:compiler and update default configs
Signed-off-by: Massimiliano Culpo <massimiliano.culpo@gmail.com>
2025-01-11 13:28:50 +01:00
Massimiliano Culpo
414b323e01 directives: remove workaround for the c, cxx and fortran language
Signed-off-by: Massimiliano Culpo <massimiliano.culpo@gmail.com>
2025-01-11 13:28:50 +01:00
Massimiliano Culpo
0705a5f468 Overhaul the spack compiler command
This reverts commit 2c47dddbc1.

Now, `spack compiler` writes by default in packages.yaml. Entries
in old `compilers.yaml` are converted to external specs as a way to
support legacy configuration.

Since this operation is expensive, an environment variable can be
used to enforce the deprecation of `compiler.yaml`.

The --mixed-toolchain option has been deprecated, since it stops to
make sense once compiler are treated as nodes.
2025-01-11 13:28:50 +01:00
Massimiliano Culpo
e432641166 Allow reading old JSON files 2025-01-11 13:28:49 +01:00
Massimiliano Culpo
cf2b5a1e4f parse_with_version_concrete: remove compiler= switch 2025-01-11 13:28:49 +01:00
Massimiliano Culpo
510623fe47 Make CompilerSpec raise on __init__ 2025-01-11 13:28:48 +01:00
Massimiliano Culpo
ae6c1a7abe parser: parse compilers as direct build deps 2025-01-11 13:28:45 +01:00
13899 changed files with 272650 additions and 292198 deletions

View File

@@ -28,7 +28,7 @@ max-line-length = 99
# - F821: undefined name `name`
#
per-file-ignores =
var/spack/*/package.py:F403,F405,F821
var/spack/repos/*/package.py:F403,F405,F821
*-ci-package.py:F403,F405,F821
# exclude things we usually do not want linting for.

3
.gitattributes vendored
View File

@@ -1,3 +1,4 @@
*.py diff=python
*.lp linguist-language=Prolog
lib/spack/external/* linguist-vendored
*.bat text eol=crlf
*.bat text eol=crlf

View File

@@ -59,6 +59,7 @@ jobs:
- name: Package audits (without coverage)
if: ${{ runner.os == 'Windows' }}
run: |
. share/spack/setup-env.sh
spack -d audit packages
./share/spack/qa/validate_last_exit.ps1
spack -d audit configs

View File

@@ -26,7 +26,7 @@ jobs:
dnf install -y \
bzip2 curl file gcc-c++ gcc gcc-gfortran git gzip \
make patch unzip which xz python3 python3-devel tree \
cmake bison bison-devel libstdc++-static gawk
cmake bison bison-devel libstdc++-static
- name: Setup OpenSUSE
if: ${{ matrix.image == 'opensuse/leap:latest' }}
run: |

View File

@@ -40,17 +40,17 @@ jobs:
# 1: Platforms to build for
# 2: Base image (e.g. ubuntu:22.04)
dockerfile: [[amazon-linux, 'linux/amd64,linux/arm64', 'amazonlinux:2'],
[centos-stream9, 'linux/amd64,linux/arm64', 'centos:stream9'],
[leap15, 'linux/amd64,linux/arm64', 'opensuse/leap:15'],
[ubuntu-focal, 'linux/amd64,linux/arm64', 'ubuntu:20.04'],
[ubuntu-jammy, 'linux/amd64,linux/arm64', 'ubuntu:22.04'],
[ubuntu-noble, 'linux/amd64,linux/arm64', 'ubuntu:24.04'],
[almalinux8, 'linux/amd64,linux/arm64', 'almalinux:8'],
[almalinux9, 'linux/amd64,linux/arm64', 'almalinux:9'],
[centos-stream9, 'linux/amd64,linux/arm64,linux/ppc64le', 'centos:stream9'],
[leap15, 'linux/amd64,linux/arm64,linux/ppc64le', 'opensuse/leap:15'],
[ubuntu-focal, 'linux/amd64,linux/arm64,linux/ppc64le', 'ubuntu:20.04'],
[ubuntu-jammy, 'linux/amd64,linux/arm64,linux/ppc64le', 'ubuntu:22.04'],
[ubuntu-noble, 'linux/amd64,linux/arm64,linux/ppc64le', 'ubuntu:24.04'],
[almalinux8, 'linux/amd64,linux/arm64,linux/ppc64le', 'almalinux:8'],
[almalinux9, 'linux/amd64,linux/arm64,linux/ppc64le', 'almalinux:9'],
[rockylinux8, 'linux/amd64,linux/arm64', 'rockylinux:8'],
[rockylinux9, 'linux/amd64,linux/arm64', 'rockylinux:9'],
[fedora39, 'linux/amd64,linux/arm64', 'fedora:39'],
[fedora40, 'linux/amd64,linux/arm64', 'fedora:40']]
[fedora39, 'linux/amd64,linux/arm64,linux/ppc64le', 'fedora:39'],
[fedora40, 'linux/amd64,linux/arm64,linux/ppc64le', 'fedora:40']]
name: Build ${{ matrix.dockerfile[0] }}
if: github.repository == 'spack/spack'
steps:

View File

@@ -9,7 +9,6 @@ on:
branches:
- develop
- releases/**
merge_group:
concurrency:
group: ci-${{github.ref}}-${{github.event.pull_request.number || github.run_number}}
@@ -26,33 +25,29 @@ jobs:
packages: ${{ steps.filter.outputs.packages }}
steps:
- uses: actions/checkout@11bd71901bbe5b1630ceea73d27597364c9af683
if: ${{ github.event_name == 'push' || github.event_name == 'merge_group' }}
if: ${{ github.event_name == 'push' }}
with:
fetch-depth: 0
# For pull requests it's not necessary to checkout the code
- uses: dorny/paths-filter@de90cc6fb38fc0963ad72b210f1f284cd68cea36
id: filter
with:
# For merge group events, compare against the target branch (main)
base: ${{ github.event_name == 'merge_group' && github.event.merge_group.base_ref || '' }}
# For merge group events, use the merge group head ref
ref: ${{ github.event_name == 'merge_group' && github.event.merge_group.head_sha || github.ref }}
# See https://github.com/dorny/paths-filter/issues/56 for the syntax used below
# Don't run if we only modified packages in the
# built-in repository or documentation
filters: |
bootstrap:
- 'var/spack/repos/spack_repo/builtin/packages/clingo-bootstrap/**'
- 'var/spack/repos/spack_repo/builtin/packages/clingo/**'
- 'var/spack/repos/spack_repo/builtin/packages/python/**'
- 'var/spack/repos/spack_repo/builtin/packages/re2c/**'
- 'var/spack/repos/spack_repo/builtin/packages/gnupg/**'
- 'var/spack/repos/spack_repo/builtin/packages/libassuan/**'
- 'var/spack/repos/spack_repo/builtin/packages/libgcrypt/**'
- 'var/spack/repos/spack_repo/builtin/packages/libgpg-error/**'
- 'var/spack/repos/spack_repo/builtin/packages/libksba/**'
- 'var/spack/repos/spack_repo/builtin/packages/npth/**'
- 'var/spack/repos/spack_repo/builtin/packages/pinentry/**'
- 'var/spack/repos/builtin/packages/clingo-bootstrap/**'
- 'var/spack/repos/builtin/packages/clingo/**'
- 'var/spack/repos/builtin/packages/python/**'
- 'var/spack/repos/builtin/packages/re2c/**'
- 'var/spack/repos/builtin/packages/gnupg/**'
- 'var/spack/repos/builtin/packages/libassuan/**'
- 'var/spack/repos/builtin/packages/libgcrypt/**'
- 'var/spack/repos/builtin/packages/libgpg-error/**'
- 'var/spack/repos/builtin/packages/libksba/**'
- 'var/spack/repos/builtin/packages/npth/**'
- 'var/spack/repos/builtin/packages/pinentry/**'
- 'lib/spack/**'
- 'share/spack/**'
- '.github/workflows/bootstrap.yml'
@@ -81,15 +76,10 @@ jobs:
prechecks:
needs: [ changes ]
uses: ./.github/workflows/prechecks.yml
uses: ./.github/workflows/valid-style.yml
secrets: inherit
with:
with_coverage: ${{ needs.changes.outputs.core }}
with_packages: ${{ needs.changes.outputs.packages }}
import-check:
needs: [ changes ]
uses: ./.github/workflows/import-check.yaml
all-prechecks:
needs: [ prechecks ]
@@ -99,7 +89,7 @@ jobs:
- name: Success
run: |
if [ "${{ needs.prechecks.result }}" == "failure" ] || [ "${{ needs.prechecks.result }}" == "canceled" ]; then
echo "Unit tests failed."
echo "Unit tests failed."
exit 1
else
exit 0
@@ -107,7 +97,6 @@ jobs:
coverage:
needs: [ unit-tests, prechecks ]
if: ${{ needs.changes.outputs.core }}
uses: ./.github/workflows/coverage.yml
secrets: inherit
@@ -120,10 +109,10 @@ jobs:
- name: Status summary
run: |
if [ "${{ needs.unit-tests.result }}" == "failure" ] || [ "${{ needs.unit-tests.result }}" == "canceled" ]; then
echo "Unit tests failed."
echo "Unit tests failed."
exit 1
elif [ "${{ needs.bootstrap.result }}" == "failure" ] || [ "${{ needs.bootstrap.result }}" == "canceled" ]; then
echo "Bootstrap tests failed."
echo "Bootstrap tests failed."
exit 1
else
exit 0

View File

@@ -33,4 +33,3 @@ jobs:
with:
verbose: true
fail_ci_if_error: false
token: ${{ secrets.CODECOV_TOKEN }}

View File

@@ -1,49 +0,0 @@
name: import-check
on:
workflow_call:
jobs:
# Check we don't make the situation with circular imports worse
import-check:
runs-on: ubuntu-latest
steps:
- uses: julia-actions/setup-julia@v2
with:
version: '1.10'
- uses: julia-actions/cache@v2
# PR: use the base of the PR as the old commit
- name: Checkout PR base commit
if: github.event_name == 'pull_request'
uses: actions/checkout@11bd71901bbe5b1630ceea73d27597364c9af683
with:
ref: ${{ github.event.pull_request.base.sha }}
path: old
# not a PR: use the previous commit as the old commit
- name: Checkout previous commit
if: github.event_name != 'pull_request'
uses: actions/checkout@11bd71901bbe5b1630ceea73d27597364c9af683
with:
fetch-depth: 2
path: old
- name: Checkout previous commit
if: github.event_name != 'pull_request'
run: git -C old reset --hard HEAD^
- name: Checkout new commit
uses: actions/checkout@11bd71901bbe5b1630ceea73d27597364c9af683
with:
path: new
- name: Install circular import checker
uses: actions/checkout@11bd71901bbe5b1630ceea73d27597364c9af683
with:
repository: haampie/circular-import-fighter
ref: 4cdb0bf15f04ab6b49041d5ef1bfd9644cce7f33
path: circular-import-fighter
- name: Install dependencies
working-directory: circular-import-fighter
run: make -j dependencies
- name: Circular import check
working-directory: circular-import-fighter
run: make -j compare "SPACK_ROOT=../old ../new"

View File

@@ -1,108 +0,0 @@
name: prechecks
on:
workflow_call:
inputs:
with_coverage:
required: true
type: string
with_packages:
required: true
type: string
concurrency:
group: style-${{github.ref}}-${{github.event.pull_request.number || github.run_number}}
cancel-in-progress: true
jobs:
# Validate that the code can be run on all the Python versions supported by Spack
validate:
runs-on: ubuntu-latest
steps:
- uses: actions/checkout@11bd71901bbe5b1630ceea73d27597364c9af683
- uses: actions/setup-python@0b93645e9fea7318ecaed2b359559ac225c90a2b
with:
python-version: '3.13'
cache: 'pip'
cache-dependency-path: '.github/workflows/requirements/style/requirements.txt'
- name: Install Python Packages
run: |
pip install -r .github/workflows/requirements/style/requirements.txt
- name: vermin (Spack's Core)
run: |
vermin --backport importlib --backport argparse --violations --backport typing -t=3.6- -vvv lib/spack/spack/ lib/spack/llnl/ bin/
- name: vermin (Repositories)
run: |
vermin --backport importlib --backport argparse --violations --backport typing -t=3.6- -vvv var/spack/repos var/spack/test_repos
# Run style checks on the files that have been changed
style:
runs-on: ubuntu-latest
steps:
- uses: actions/checkout@11bd71901bbe5b1630ceea73d27597364c9af683
with:
fetch-depth: 2
- uses: actions/setup-python@0b93645e9fea7318ecaed2b359559ac225c90a2b
with:
python-version: '3.13'
cache: 'pip'
cache-dependency-path: '.github/workflows/requirements/style/requirements.txt'
- name: Install Python packages
run: |
pip install -r .github/workflows/requirements/style/requirements.txt
- name: Run style tests
run: |
bin/spack style --base HEAD^1
bin/spack license verify
pylint -j $(nproc) --disable=all --enable=unspecified-encoding --ignore-paths=lib/spack/external lib
audit:
uses: ./.github/workflows/audit.yaml
secrets: inherit
with:
with_coverage: ${{ inputs.with_coverage }}
python_version: '3.13'
verify-checksums:
# do not run if the commit message or PR description contains [skip-verify-checksums]
if: >-
${{ inputs.with_packages == 'true' &&
!contains(github.event.pull_request.body, '[skip-verify-checksums]') &&
!contains(github.event.head_commit.message, '[skip-verify-checksums]') }}
runs-on: ubuntu-latest
steps:
- uses: actions/checkout@a5ac7e51b41094c92402da3b24376905380afc29
with:
fetch-depth: 2
- name: Verify Added Checksums
run: |
bin/spack ci verify-versions HEAD^1 HEAD
# Check that spack can bootstrap the development environment on Python 3.6 - RHEL8
bootstrap-dev-rhel8:
runs-on: ubuntu-latest
container: registry.access.redhat.com/ubi8/ubi
steps:
- name: Install dependencies
run: |
dnf install -y \
bzip2 curl file gcc-c++ gcc gcc-gfortran git gnupg2 gzip \
make patch tcl unzip which xz
- uses: actions/checkout@11bd71901bbe5b1630ceea73d27597364c9af683
- name: Setup repo and non-root user
run: |
git --version
git config --global --add safe.directory '*'
git fetch --unshallow
. .github/workflows/bin/setup_git.sh
useradd spack-test
chown -R spack-test .
- name: Bootstrap Spack development environment
shell: runuser -u spack-test -- bash {0}
run: |
source share/spack/setup-env.sh
spack debug report
spack -d bootstrap now --dev
spack -d style -t black
spack unit-test -V

View File

@@ -1,8 +1,7 @@
black==25.1.0
clingo==5.8.0
flake8==7.2.0
isort==6.0.1
mypy==1.15.0
types-six==1.17.0.20250403
black==24.10.0
clingo==5.7.1
flake8==7.1.1
isort==5.13.2
mypy==1.11.2
types-six==1.17.0.20241205
vermin==1.6.0
pylint==3.3.7

View File

@@ -1,34 +0,0 @@
name: sync with spack/spack-packages
on:
push:
branches:
- develop
jobs:
sync:
if: github.repository == 'spack/spack'
runs-on: ubuntu-latest
steps:
- name: Checkout spack/spack
run: git clone https://github.com/spack/spack.git
- name: Checkout spack/spack-packages
uses: actions/checkout@11bd71901bbe5b1630ceea73d27597364c9af683
with:
ssh-key: ${{ secrets.SYNC_PACKAGES_KEY }}
path: spack-packages
repository: spack/spack-packages
- name: Install git-filter-repo
run: |
curl -LfsO https://raw.githubusercontent.com/newren/git-filter-repo/refs/tags/v2.47.0/git-filter-repo
echo "67447413e273fc76809289111748870b6f6072f08b17efe94863a92d810b7d94 git-filter-repo" | sha256sum -c -
chmod +x git-filter-repo
sudo mv git-filter-repo /usr/local/bin/
- name: Sync spack/spack-packages with spack/spack
run: |
cd spack-packages
git-filter-repo --quiet --source ../spack --subdirectory-filter var/spack/repos --refs develop
- name: Push
run: |
cd spack-packages
git push git@github.com:spack/spack-packages.git develop:develop --force

View File

@@ -19,6 +19,9 @@ jobs:
on_develop:
- ${{ github.ref == 'refs/heads/develop' }}
include:
- python-version: '3.6'
os: ubuntu-20.04
on_develop: ${{ github.ref == 'refs/heads/develop' }}
- python-version: '3.7'
os: ubuntu-22.04
on_develop: ${{ github.ref == 'refs/heads/develop' }}
@@ -58,7 +61,7 @@ jobs:
run: "brew install kcov"
- name: Install Python packages
run: |
pip install --upgrade pip setuptools pytest pytest-xdist pytest-cov
pip install --upgrade pip setuptools pytest pytest-xdist pytest-cov clingo
pip install --upgrade flake8 "isort>=4.3.5" "mypy>=0.900" "click" "black"
- name: Setup git configuration
run: |
@@ -182,7 +185,6 @@ jobs:
spack bootstrap disable github-actions-v0.5
spack bootstrap disable github-actions-v0.6
spack bootstrap status
spack solve zlib
spack unit-test --verbose --cov --cov-config=pyproject.toml --cov-report=xml:coverage.xml lib/spack/spack/test/concretization/core.py
- uses: actions/upload-artifact@6f51ac03b9356f520e9adb1b1b7802705f340c2b
with:
@@ -220,7 +222,7 @@ jobs:
. share/spack/setup-env.sh
$(which spack) bootstrap disable spack-install
$(which spack) solve zlib
common_args=(--dist loadfile --tx '4*popen//python=./bin/spack-tmpconfig python -u ./bin/spack python' -x)
common_args=(--dist loadfile --tx '4*popen//python=./bin/spack-tmpconfig python -u ./bin/spack python')
$(which spack) unit-test --verbose --cov --cov-config=pyproject.toml --cov-report=xml:coverage.xml "${common_args[@]}"
- uses: actions/upload-artifact@6f51ac03b9356f520e9adb1b1b7802705f340c2b
with:
@@ -251,7 +253,7 @@ jobs:
env:
COVERAGE_FILE: coverage/.coverage-windows
run: |
spack unit-test -x --verbose --cov --cov-config=pyproject.toml
spack unit-test --verbose --cov --cov-config=pyproject.toml
./share/spack/qa/validate_last_exit.ps1
- uses: actions/upload-artifact@6f51ac03b9356f520e9adb1b1b7802705f340c2b
with:

166
.github/workflows/valid-style.yml vendored Normal file
View File

@@ -0,0 +1,166 @@
name: style
on:
workflow_call:
inputs:
with_coverage:
required: true
type: string
concurrency:
group: style-${{github.ref}}-${{github.event.pull_request.number || github.run_number}}
cancel-in-progress: true
jobs:
# Validate that the code can be run on all the Python versions supported by Spack
validate:
runs-on: ubuntu-latest
steps:
- uses: actions/checkout@11bd71901bbe5b1630ceea73d27597364c9af683
- uses: actions/setup-python@0b93645e9fea7318ecaed2b359559ac225c90a2b
with:
python-version: '3.13'
cache: 'pip'
- name: Install Python Packages
run: |
pip install --upgrade pip setuptools
pip install -r .github/workflows/requirements/style/requirements.txt
- name: vermin (Spack's Core)
run: vermin --backport importlib --backport argparse --violations --backport typing -t=3.6- -vvv lib/spack/spack/ lib/spack/llnl/ bin/
- name: vermin (Repositories)
run: vermin --backport importlib --backport argparse --violations --backport typing -t=3.6- -vvv var/spack/repos
# Run style checks on the files that have been changed
style:
runs-on: ubuntu-latest
steps:
- uses: actions/checkout@11bd71901bbe5b1630ceea73d27597364c9af683
with:
fetch-depth: 0
- uses: actions/setup-python@0b93645e9fea7318ecaed2b359559ac225c90a2b
with:
python-version: '3.13'
cache: 'pip'
- name: Install Python packages
run: |
pip install --upgrade pip setuptools
pip install -r .github/workflows/requirements/style/requirements.txt
- name: Setup git configuration
run: |
# Need this for the git tests to succeed.
git --version
. .github/workflows/bin/setup_git.sh
- name: Run style tests
run: |
share/spack/qa/run-style-tests
audit:
uses: ./.github/workflows/audit.yaml
secrets: inherit
with:
with_coverage: ${{ inputs.with_coverage }}
python_version: '3.13'
# Check that spack can bootstrap the development environment on Python 3.6 - RHEL8
bootstrap-dev-rhel8:
runs-on: ubuntu-latest
container: registry.access.redhat.com/ubi8/ubi
steps:
- name: Install dependencies
run: |
dnf install -y \
bzip2 curl file gcc-c++ gcc gcc-gfortran git gnupg2 gzip \
make patch tcl unzip which xz
- uses: actions/checkout@11bd71901bbe5b1630ceea73d27597364c9af683
- name: Setup repo and non-root user
run: |
git --version
git config --global --add safe.directory '*'
git fetch --unshallow
. .github/workflows/bin/setup_git.sh
useradd spack-test
chown -R spack-test .
- name: Bootstrap Spack development environment
shell: runuser -u spack-test -- bash {0}
run: |
source share/spack/setup-env.sh
spack debug report
spack -d bootstrap now --dev
spack -d style -t black
spack unit-test -V
# Check we don't make the situation with circular imports worse
import-check:
runs-on: ubuntu-latest
steps:
- uses: julia-actions/setup-julia@v2
with:
version: '1.10'
- uses: julia-actions/cache@v2
# PR: use the base of the PR as the old commit
- name: Checkout PR base commit
if: github.event_name == 'pull_request'
uses: actions/checkout@11bd71901bbe5b1630ceea73d27597364c9af683
with:
ref: ${{ github.event.pull_request.base.sha }}
path: old
# not a PR: use the previous commit as the old commit
- name: Checkout previous commit
if: github.event_name != 'pull_request'
uses: actions/checkout@11bd71901bbe5b1630ceea73d27597364c9af683
with:
fetch-depth: 2
path: old
- name: Checkout previous commit
if: github.event_name != 'pull_request'
run: git -C old reset --hard HEAD^
- name: Checkout new commit
uses: actions/checkout@11bd71901bbe5b1630ceea73d27597364c9af683
with:
path: new
- name: Install circular import checker
uses: actions/checkout@11bd71901bbe5b1630ceea73d27597364c9af683
with:
repository: haampie/circular-import-fighter
ref: b5d6ce9be35f602cca7d5a6aa0259fca10639cca
path: circular-import-fighter
- name: Install dependencies
working-directory: circular-import-fighter
run: make -j dependencies
- name: Problematic imports before
working-directory: circular-import-fighter
run: make SPACK_ROOT=../old SUFFIX=.old
- name: Problematic imports after
working-directory: circular-import-fighter
run: make SPACK_ROOT=../new SUFFIX=.new
- name: Compare import cycles
working-directory: circular-import-fighter
run: |
edges_before="$(head -n1 solution.old)"
edges_after="$(head -n1 solution.new)"
if [ "$edges_after" -gt "$edges_before" ]; then
printf '\033[1;31mImport check failed: %s imports need to be deleted, ' "$edges_after"
printf 'previously this was %s\033[0m\n' "$edges_before"
printf 'Compare \033[1;97m"Problematic imports before"\033[0m and '
printf '\033[1;97m"Problematic imports after"\033[0m.\n'
exit 1
else
printf '\033[1;32mImport check passed: %s <= %s\033[0m\n' "$edges_after" "$edges_before"
fi
# Further style checks from pylint
pylint:
runs-on: ubuntu-latest
steps:
- uses: actions/checkout@11bd71901bbe5b1630ceea73d27597364c9af683
with:
fetch-depth: 0
- uses: actions/setup-python@0b93645e9fea7318ecaed2b359559ac225c90a2b
with:
python-version: '3.13'
cache: 'pip'
- name: Install Python packages
run: |
pip install --upgrade pip setuptools pylint
- name: Pylint (Spack Core)
run: |
pylint -j 4 --disable=all --enable=unspecified-encoding --ignore-paths=lib/spack/external lib

1
.gitignore vendored
View File

@@ -201,6 +201,7 @@ tramp
# Org-mode
.org-id-locations
*_archive
# flymake-mode
*_flymake.*

View File

@@ -46,42 +46,18 @@ See the
[Feature Overview](https://spack.readthedocs.io/en/latest/features.html)
for examples and highlights.
Installation
----------------
To install spack, first make sure you have Python & Git.
To install spack and your first package, make sure you have Python & Git.
Then:
```bash
git clone -c feature.manyFiles=true --depth=2 https://github.com/spack/spack.git
```
<details>
<summary>What are <code>manyFiles=true</code> and <code>--depth=2</code>?</summary>
<br>
$ git clone -c feature.manyFiles=true --depth=2 https://github.com/spack/spack.git
$ cd spack/bin
$ ./spack install zlib
> [!TIP]
> `-c feature.manyFiles=true` improves git's performance on repositories with 1,000+ files.
>
> `--depth=2` prunes the git history to reduce the size of the Spack installation.
</details>
```bash
# For bash/zsh/sh
. spack/share/spack/setup-env.sh
# For tcsh/csh
source spack/share/spack/setup-env.csh
# For fish
. spack/share/spack/setup-env.fish
```
```bash
# Now you're ready to install a package!
spack install zlib-ng
```
Documentation
----------------

View File

@@ -25,6 +25,7 @@ exit 1
# The code above runs this file with our preferred python interpreter.
import os
import os.path
import sys
min_python3 = (3, 6)

View File

@@ -43,28 +43,6 @@ concretizer:
# (e.g. py-setuptools, cmake etc.)
# "full" (experimental): allows separation of the entire build-tool stack (e.g. the entire "cmake" subDAG)
strategy: minimal
# Maximum number of duplicates in a DAG, when using a strategy that allows duplicates. "default" is the
# number used if there isn't a more specific alternative
max_dupes:
default: 1
# Virtuals
c: 2
cxx: 2
fortran: 1
# Regular packages
cmake: 2
gmake: 2
python: 2
python-venv: 2
py-cython: 2
py-flit-core: 2
py-pip: 2
py-setuptools: 2
py-wheel: 2
xcb-proto: 2
# Compilers
gcc: 2
llvm: 2
# Option to specify compatibility between operating systems for reuse of compilers and packages
# Specified as a key: [list] where the key is the os that is being targeted, and the list contains the OS's
# it can reuse. Note this is a directional compatibility so mutual compatibility between two OS's
@@ -85,7 +63,3 @@ concretizer:
# Setting this to false yields unreproducible results, so we advise to use that value only
# for debugging purposes (e.g. check which constraints can help Spack concretize faster).
error_on_timeout: true
# Static analysis may reduce the concretization time by generating smaller ASP problems, in
# cases where there are requirements that prevent part of the search space to be explored.
static_analysis: false

View File

@@ -90,9 +90,10 @@ config:
misc_cache: $user_cache_path/cache
# Abort downloads after this many seconds if not data is received.
# Setting this to 0 will disable the timeout.
connect_timeout: 30
# Timeout in seconds used for downloading sources etc. This only applies
# to the connection phase and can be increased for slow connections or
# servers. 0 means no timeout.
connect_timeout: 10
# If this is false, tools like curl that use SSL will not verify

View File

@@ -25,8 +25,6 @@ packages:
glu: [apple-glu]
unwind: [apple-libunwind]
uuid: [apple-libuuid]
apple-clang:
buildable: false
apple-gl:
buildable: false
externals:
@@ -51,12 +49,3 @@ packages:
# although the version number used here isn't critical
- spec: apple-libuuid@1353.100.2
prefix: /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk
c:
prefer:
- apple-clang
cxx:
prefer:
- apple-clang
fortran:
prefer:
- gcc

View File

@@ -19,14 +19,14 @@ packages:
awk: [gawk]
armci: [armcimpi]
blas: [openblas, amdblis]
c: [gcc, llvm, intel-oneapi-compilers]
cxx: [gcc, llvm, intel-oneapi-compilers]
c: [gcc, llvm, intel-oneapi-compilers, xl, aocc]
cxx: [gcc, llvm, intel-oneapi-compilers, xl, aocc]
D: [ldc]
daal: [intel-oneapi-daal]
elf: [elfutils]
fftw-api: [fftw, amdfftw]
flame: [libflame, amdlibflame]
fortran: [gcc, llvm, intel-oneapi-compilers]
fortran: [gcc, llvm]
fortran-rt: [gcc-runtime, intel-oneapi-runtime]
fuse: [libfuse]
gl: [glx, osmesa]
@@ -35,7 +35,7 @@ packages:
go-or-gccgo-bootstrap: [go-bootstrap, gcc]
iconv: [libiconv]
ipp: [intel-oneapi-ipp]
java: [openjdk, jdk]
java: [openjdk, jdk, ibm-java]
jpeg: [libjpeg-turbo, libjpeg]
lapack: [openblas, amdlibflame]
libc: [glibc, musl]
@@ -72,39 +72,15 @@ packages:
permissions:
read: world
write: user
cce:
buildable: false
cray-fftw:
buildable: false
cray-libsci:
buildable: false
cray-mpich:
buildable: false
cray-mvapich2:
buildable: false
cray-pmi:
buildable: false
egl:
buildable: false
essl:
buildable: false
fj:
buildable: false
fujitsu-mpi:
buildable: false
fujitsu-ssl2:
buildable: false
glibc:
buildable: false
hpcx-mpi:
buildable: false
iconv:
prefer: [libiconv]
mpt:
buildable: false
musl:
buildable: false
spectrum-mpi:
buildable: false
xl:
buildable: false

View File

@@ -11,4 +11,4 @@
# ~/.spack/repos.yaml
# -------------------------------------------------------------------------
repos:
- $spack/var/spack/repos/spack_repo/builtin
- $spack/var/spack/repos/builtin

View File

@@ -1,5 +1,5 @@
config:
locks: false
build_stage::
- '$user_cache_path/stage'
- '$spack/.staging'
stage_name: '{name}-{version}-{hash:7}'

View File

@@ -20,8 +20,3 @@ packages:
cxx: [msvc]
mpi: [msmpi]
gl: [wgl]
mpi:
require:
- one_of: [msmpi]
msvc:
buildable: false

View File

@@ -1291,61 +1291,55 @@ based on site policies.
Variants
^^^^^^^^
Variants are named options associated with a particular package and are
typically used to enable or disable certain features at build time. They
are optional, as each package must provide default values for each variant
it makes available.
The names of variants available for a particular package depend on
Variants are named options associated with a particular package. They are
optional, as each package must provide default values for each variant it
makes available. Variants can be specified using
a flexible parameter syntax ``name=<value>``. For example,
``spack install mercury debug=True`` will install mercury built with debug
flags. The names of particular variants available for a package depend on
what was provided by the package author. ``spack info <package>`` will
provide information on what build variants are available.
There are different types of variants:
For compatibility with earlier versions, variants which happen to be
boolean in nature can be specified by a syntax that represents turning
options on and off. For example, in the previous spec we could have
supplied ``mercury +debug`` with the same effect of enabling the debug
compile time option for the libelf package.
1. Boolean variants. Typically used to enable or disable a feature at
compile time. For example, a package might have a ``debug`` variant that
can be explicitly enabled with ``+debug`` and disabled with ``~debug``.
2. Single-valued variants. Often used to set defaults. For example, a package
might have a ``compression`` variant that determines the default
compression algorithm, which users could set to ``compression=gzip`` or
``compression=zstd``.
3. Multi-valued variants. A package might have a ``fabrics`` variant that
determines which network fabrics to support. Users could set this to
``fabrics=verbs,ofi`` to enable both InfiniBand verbs and OpenFabrics
interfaces. The values are separated by commas.
Depending on the package a variant may have any default value. For
``mercury`` here, ``debug`` is ``False`` by default, and we turned it on
with ``debug=True`` or ``+debug``. If a variant is ``True`` by default
you can turn it off by either adding ``-name`` or ``~name`` to the spec.
The meaning of ``fabrics=verbs,ofi`` is to enable *at least* the specified
fabrics, but other fabrics may be enabled as well. If the intent is to
enable *only* the specified fabrics, then the ``fabrics:=verbs,ofi``
syntax should be used with the ``:=`` operator.
There are two syntaxes here because, depending on context, ``~`` and
``-`` may mean different things. In most shells, the following will
result in the shell performing home directory substitution:
.. note::
.. code-block:: sh
In certain shells, the the ``~`` character is expanded to the home
directory. To avoid these issues, avoid whitespace between the package
name and the variant:
mpileaks ~debug # shell may try to substitute this!
mpileaks~debug # use this instead
.. code-block:: sh
If there is a user called ``debug``, the ``~`` will be incorrectly
expanded. In this situation, you would want to write ``libelf
-debug``. However, ``-`` can be ambiguous when included after a
package name without spaces:
mpileaks ~debug # shell may try to substitute this!
mpileaks~debug # use this instead
.. code-block:: sh
Alternatively, you can use the ``-`` character to disable a variant,
but be aware that this requires a space between the package name and
the variant:
mpileaks-debug # wrong!
mpileaks -debug # right
.. code-block:: sh
Spack allows the ``-`` character to be part of package names, so the
above will be interpreted as a request for the ``mpileaks-debug``
package, not a request for ``mpileaks`` built without ``debug``
options. In this scenario, you should write ``mpileaks~debug`` to
avoid ambiguity.
mpileaks-debug # wrong: refers to a package named "mpileaks-debug"
mpileaks -debug # right: refers to a package named mpileaks with debug disabled
As a last resort, ``debug=False`` can also be used to disable a boolean variant.
"""""""""""""""""""""""""""""""""""
Variant propagation to dependencies
"""""""""""""""""""""""""""""""""""
When spack normalizes specs, it prints them out with no spaces boolean
variants using the backwards compatibility syntax and uses only ``~``
for disabled boolean variants. The ``-`` and spaces on the command
line are provided for convenience and legibility.
Spack allows variants to propagate their value to the package's
dependency by using ``++``, ``--``, and ``~~`` for boolean variants.
@@ -1415,29 +1409,27 @@ that executables will run without the need to set ``LD_LIBRARY_PATH``.
.. code-block:: yaml
packages:
gcc:
externals:
- spec: gcc@4.9.3
prefix: /opt/gcc
extra_attributes:
compilers:
c: /opt/gcc/bin/gcc
cxx: /opt/gcc/bin/g++
fortran: /opt/gcc/bin/gfortran
environment:
unset:
- BAD_VARIABLE
set:
GOOD_VARIABLE_NUM: 1
GOOD_VARIABLE_STR: good
prepend_path:
PATH: /path/to/binutils
append_path:
LD_LIBRARY_PATH: /opt/gcc/lib
extra_rpaths:
- /path/to/some/compiler/runtime/directory
- /path/to/some/other/compiler/runtime/directory
compilers:
- compiler:
spec: gcc@4.9.3
paths:
cc: /opt/gcc/bin/gcc
c++: /opt/gcc/bin/g++
f77: /opt/gcc/bin/gfortran
fc: /opt/gcc/bin/gfortran
environment:
unset:
- BAD_VARIABLE
set:
GOOD_VARIABLE_NUM: 1
GOOD_VARIABLE_STR: good
prepend_path:
PATH: /path/to/binutils
append_path:
LD_LIBRARY_PATH: /opt/gcc/lib
extra_rpaths:
- /path/to/some/compiler/runtime/directory
- /path/to/some/other/compiler/runtime/directory
^^^^^^^^^^^^^^^^^^^^^^^
@@ -1769,24 +1761,19 @@ Verifying installations
The ``spack verify`` command can be used to verify the validity of
Spack-installed packages any time after installation.
^^^^^^^^^^^^^^^^^^^^^^^^^
``spack verify manifest``
^^^^^^^^^^^^^^^^^^^^^^^^^
At installation time, Spack creates a manifest of every file in the
installation prefix. For links, Spack tracks the mode, ownership, and
destination. For directories, Spack tracks the mode, and
ownership. For files, Spack tracks the mode, ownership, modification
time, hash, and size. The ``spack verify manifest`` command will check,
for every file in each package, whether any of those attributes have
changed. It will also check for newly added files or deleted files from
the installation prefix. Spack can either check all installed packages
time, hash, and size. The Spack verify command will check, for every
file in each package, whether any of those attributes have changed. It
will also check for newly added files or deleted files from the
installation prefix. Spack can either check all installed packages
using the `-a,--all` or accept specs listed on the command line to
verify.
The ``spack verify manifest`` command can also verify for individual files
that they haven't been altered since installation time. If the given file
The ``spack verify`` command can also verify for individual files that
they haven't been altered since installation time. If the given file
is not in a Spack installation prefix, Spack will report that it is
not owned by any package. To check individual files instead of specs,
use the ``-f,--files`` option.
@@ -1801,22 +1788,6 @@ check only local packages (as opposed to those used transparently from
``upstream`` spack instances) and the ``-j,--json`` option to output
machine-readable json data for any errors.
^^^^^^^^^^^^^^^^^^^^^^^^^^
``spack verify libraries``
^^^^^^^^^^^^^^^^^^^^^^^^^^
The ``spack verify libraries`` command can be used to verify that packages
do not have accidental system dependencies. This command scans the install
prefixes of packages for executables and shared libraries, and resolves
their needed libraries in their RPATHs. When needed libraries cannot be
located, an error is reported. This typically indicates that a package
was linked against a system library, instead of a library provided by
a Spack package.
This verification can also be enabled as a post-install hook by setting
``config:shared_linking:missing_library_policy`` to ``error`` or ``warn``
in :ref:`config.yaml <config-yaml>`.
-----------------------
Filesystem requirements
-----------------------
@@ -1916,7 +1887,7 @@ diagnostics. Issues, if found, are reported to stdout:
PKG-DIRECTIVES: 1 issue found
1. lammps: wrong variant in "conflicts" directive
the variant 'adios' does not exist
in /home/spack/spack/var/spack/repos/spack_repo/builtin/packages/lammps/package.py
in /home/spack/spack/var/spack/repos/builtin/packages/lammps/package.py
------------

View File

@@ -45,14 +45,10 @@ provided binary cache, which can be a local directory or a remote URL.
Here is an example where a build cache is created in a local directory named
"spack-cache", to which we push the "ninja" spec:
ninja-1.12.1-vmvycib6vmiofkdqgrblo7zsvp7odwut
.. code-block:: console
$ spack buildcache push ./spack-cache ninja
==> Selected 30 specs to push to file:///home/spackuser/spack/spack-cache
...
==> [30/30] Pushed ninja@1.12.1/ngldn2k
==> Pushing binary packages to file:///home/spackuser/spack/spack-cache/build_cache
Note that ``ninja`` must be installed locally for this to work.
@@ -102,10 +98,9 @@ Now you can use list:
.. code-block:: console
$ spack buildcache list
==> 24 cached builds.
-- linux-ubuntu22.04-sapphirerapids / gcc@12.3.0 ----------------
[ ... ]
ninja@1.12.1
==> 1 cached build.
-- linux-ubuntu20.04-skylake / gcc@9.3.0 ------------------------
ninja@1.10.2
With ``mymirror`` configured and an index available, Spack will automatically
use it during concretization and installation. That means that you can expect
@@ -116,17 +111,17 @@ verify by re-installing ninja:
$ spack uninstall ninja
$ spack install ninja
[ ... ]
==> Installing ninja-1.12.1-ngldn2kpvb6lqc44oqhhow7fzg7xu7lh [24/24]
gpg: Signature made Thu 06 Mar 2025 10:03:38 AM MST
gpg: using RSA key 75BC0528114909C076E2607418010FFAD73C9B07
==> Installing ninja-1.11.1-yxferyhmrjkosgta5ei6b4lqf6bxbscz
==> Fetching file:///home/spackuser/spack/spack-cache/build_cache/linux-ubuntu20.04-skylake-gcc-9.3.0-ninja-1.10.2-yxferyhmrjkosgta5ei6b4lqf6bxbscz.spec.json.sig
gpg: Signature made Do 12 Jan 2023 16:01:04 CET
gpg: using RSA key 61B82B2B2350E171BD17A1744E3A689061D57BF6
gpg: Good signature from "example (GPG created for Spack) <example@example.com>" [ultimate]
==> Fetching file:///home/spackuser/spack/spack-cache/blobs/sha256/f0/f08eb62661ad159d2d258890127fc6053f5302a2f490c1c7f7bd677721010ee0
==> Fetching file:///home/spackuser/spack/spack-cache/blobs/sha256/c7/c79ac6e40dfdd01ac499b020e52e57aa91151febaea3ad183f90c0f78b64a31a
==> Extracting ninja-1.12.1-ngldn2kpvb6lqc44oqhhow7fzg7xu7lh from binary cache
==> ninja: Successfully installed ninja-1.12.1-ngldn2kpvb6lqc44oqhhow7fzg7xu7lh
Search: 0.00s. Fetch: 0.11s. Install: 0.11s. Extract: 0.10s. Relocate: 0.00s. Total: 0.22s
[+] /home/spackuser/spack/opt/spack/linux-ubuntu22.04-sapphirerapids/gcc-12.3.0/ninja-1.12.1-ngldn2kpvb6lqc44oqhhow7fzg7xu7lh
==> Fetching file:///home/spackuser/spack/spack-cache/build_cache/linux-ubuntu20.04-skylake/gcc-9.3.0/ninja-1.10.2/linux-ubuntu20.04-skylake-gcc-9.3.0-ninja-1.10.2-yxferyhmrjkosgta5ei6b4lqf6bxbscz.spack
==> Extracting ninja-1.10.2-yxferyhmrjkosgta5ei6b4lqf6bxbscz from binary cache
==> ninja: Successfully installed ninja-1.11.1-yxferyhmrjkosgta5ei6b4lqf6bxbscz
Search: 0.00s. Fetch: 0.17s. Install: 0.12s. Total: 0.29s
[+] /home/harmen/spack/opt/spack/linux-ubuntu20.04-skylake/gcc-9.3.0/ninja-1.11.1-yxferyhmrjkosgta5ei6b4lqf6bxbscz
It worked! You've just completed a full example of creating a build cache with
a spec of interest, adding it as a mirror, updating its index, listing the contents,
@@ -349,18 +344,19 @@ which lets you get started quickly. See the following resources for more informa
^^^^^^^^^^^^^^^^^^^^^^^^^^^
Create tarball of installed Spack package and all dependencies.
Tarballs and specfiles are compressed and checksummed, manifests are signed if gpg2 is available.
Commands like ``spack buildcache install`` will search Spack mirrors to get the list of build caches.
Tarballs are checksummed and signed if gpg2 is available.
Places them in a directory ``build_cache`` that can be copied to a mirror.
Commands like ``spack buildcache install`` will search Spack mirrors for build_cache to get the list of build caches.
============== ========================================================================================================================
Arguments Description
============== ========================================================================================================================
``<specs>`` list of partial specs or hashes with a leading ``/`` to match from installed packages and used for creating build caches
``-d <path>`` directory in which ``v3`` and ``blobs`` directories are created, defaults to ``.``
``-f`` overwrite compressed tarball and spec metadata files if they already exist
``-d <path>`` directory in which ``build_cache`` directory is created, defaults to ``.``
``-f`` overwrite ``.spack`` file in ``build_cache`` directory if it exists
``-k <key>`` the key to sign package with. In the case where multiple keys exist, the package will be unsigned unless ``-k`` is used.
``-r`` make paths in binaries relative before creating tarball
``-y`` answer yes to all questions about creating unsigned build caches
``-y`` answer yes to all create unsigned ``build_cache`` questions
============== ========================================================================================================================
^^^^^^^^^^^^^^^^^^^^^^^^^
@@ -401,165 +397,6 @@ List public keys available on Spack mirror.
========= ==============================================
Arguments Description
========= ==============================================
``-it`` trust the keys downloaded with prompt for each
``-i`` trust the keys downloaded with prompt for each
``-y`` answer yes to all trust all keys downloaded
========= ==============================================
.. _build_cache_layout:
------------------
Build Cache Layout
------------------
This section describes the structure and content of URL-style build caches, as
distinguished from OCI-style build caches.
The entry point for a binary package is a manifest json file that points to at
least two other files stored as content-addressed blobs. These files include a spec
metadata file, as well as the installation directory of the package stored as
a compressed archive file. Binary package manifest files are named to indicate
the package name and version, as well as the hash of the concrete spec. For
example::
gcc-runtime-12.3.0-qyu2lvgt3nxh7izxycugdbgf5gsdpkjt.spec.manifest.json
would contain the manifest for a binary package of ``gcc-runtime@12.3.0``.
The id of the built package is defined to be the DAG hash of the concrete spec,
and exists in the name of the file as well. The id distinguishes a particular
binary package from all other binary packages with the same package name and
version. Below is an example binary package manifest file. Such a file would
live in the versioned spec manifests directory of a binary mirror, for example
``v3/manifests/spec/``::
{
"version": 3,
"data": [
{
"contentLength": 10731083,
"mediaType": "application/vnd.spack.install.v2.tar+gzip",
"compression": "gzip",
"checksumAlgorithm": "sha256",
"checksum": "0f24aa6b5dd7150067349865217acd3f6a383083f9eca111d2d2fed726c88210"
},
{
"contentLength": 1000,
"mediaType": "application/vnd.spack.spec.v5+json",
"compression": "gzip",
"checksumAlgorithm": "sha256",
"checksum": "fba751c4796536737c9acbb718dad7429be1fa485f5585d450ab8b25d12ae041"
}
]
}
The manifest points to both the compressed tar file as well as the compressed
spec metadata file, and contains the checksum of each. This checksum
is also used as the address of the associated file, and hence, must be
known in order to locate the tarball or spec file within the mirror. Once the
tarball or spec metadata file is downloaded, the checksum should be computed locally
and compared to the checksum in the manifest to ensure the contents have not changed
since the binary package was pushed. Spack stores all data files (including compressed
tar files, spec metadata, indices, public keys, etc) within a ``blobs/<hash-algorithm>/``
directory, using the first two characters of the checksum as a sub-directory
to reduce the number files in a single folder. Here is a depiction of the
organization of binary mirror contents::
mirror_directory/
v3/
layout.json
manifests/
spec/
gcc-runtime/
gcc-runtime-12.3.0-s2nqujezsce4x6uhtvxscu7jhewqzztx.spec.manifest.json
gmake/
gmake-4.4.1-lpr4j77rcgkg5536tmiuzwzlcjsiomph.spec.manifest.json
compiler-wrapper/
compiler-wrapper-1.0-s7ieuyievp57vwhthczhaq2ogowf3ohe.spec.manifest.json
index/
index.manifest.json
key/
75BC0528114909C076E2607418010FFAD73C9B07.key.manifest.json
keys.manifest.json
blobs/
sha256/
0f/
0f24aa6b5dd7150067349865217acd3f6a383083f9eca111d2d2fed726c88210
fb/
fba751c4796536737c9acbb718dad7429be1fa485f5585d450ab8b25d12ae041
2a/
2a21836d206ccf0df780ab0be63fdf76d24501375306a35daa6683c409b7922f
...
Files within the ``manifests`` directory are organized into subdirectories by
the type of entity they represent. Binary package manifests live in the ``spec/``
directory, binary cache index manifests live in the ``index/`` directory, and
manifests for public keys and their indices live in the ``key/`` subdirectory.
Regardless of the type of entity they represent, all manifest files are named
with an extension ``.manifest.json``.
Every manifest contains a ``data`` array, each element of which refers to an
associated file stored a content-addressed blob. Considering the example spec
manifest shown above, the compressed installation archive can be found by
picking out the data blob with the appropriate ``mediaType``, which in this
case would be ``application/vnd.spack.install.v1.tar+gzip``. The associated
file is found by looking in the blobs directory under ``blobs/sha256/fb/`` for
the file named with the complete checksum value.
As mentioned above, every entity in a binary mirror (aka build cache) is stored
as a content-addressed blob pointed to by a manifest. While an example spec
manifest (i.e. a manifest for a binary package) is shown above, here is what
the manifest of a build cache index looks like::
{
"version": 3,
"data": [
{
"contentLength": 6411,
"mediaType": "application/vnd.spack.db.v8+json",
"compression": "none",
"checksumAlgorithm": "sha256",
"checksum": "225a3e9da24d201fdf9d8247d66217f5b3f4d0fc160db1498afd998bfd115234"
}
]
}
Some things to note about this manifest are that it points to a blob that is not
compressed (``compression: "none"``), and that the ``mediaType`` is one we have
not seen yet, ``application/vnd.spack.db.v8+json``. The decision not to compress
build cache indices stems from the fact that spack does not yet sign build cache
index manifests. Once that changes, you may start to see these indices stored as
compressed blobs.
For completeness, here are examples of manifests for the other two types of entities
you might find in a spack build cache. First a public key manifest::
{
"version": 3,
"data": [
{
"contentLength": 2472,
"mediaType": "application/pgp-keys",
"compression": "none",
"checksumAlgorithm": "sha256",
"checksum": "9fc18374aebc84deb2f27898da77d4d4410e5fb44c60c6238cb57fb36147e5c7"
}
]
}
Note the ``mediaType`` of ``application/pgp-keys``. Finally, a public key index manifest::
{
"version": 3,
"data": [
{
"contentLength": 56,
"mediaType": "application/vnd.spack.keyindex.v1+json",
"compression": "none",
"checksumAlgorithm": "sha256",
"checksum": "29b3a0eb6064fd588543bc43ac7d42d708a69058dafe4be0859e3200091a9a1c"
}
]
}
Again note the ``mediaType`` of ``application/vnd.spack.keyindex.v1+json``. Also note
that both the above manifest examples refer to uncompressed blobs, this is for the same
reason spack does not yet compress build cache index blobs.

View File

@@ -170,7 +170,7 @@ bootstrapping.
To register the mirror on the platform where it's supposed to be used run the following command(s):
% spack bootstrap add --trust local-sources /opt/bootstrap/metadata/sources
% spack bootstrap add --trust local-binaries /opt/bootstrap/metadata/binaries
% spack buildcache update-index /opt/bootstrap/bootstrap_cache
This command needs to be run on a machine with internet access and the resulting folder
has to be moved over to the air-gapped system. Once the local sources are added using the

View File

@@ -63,6 +63,7 @@ on these ideas for each distinct build system that Spack supports:
build_systems/cudapackage
build_systems/custompackage
build_systems/inteloneapipackage
build_systems/intelpackage
build_systems/rocmpackage
build_systems/sourceforgepackage
@@ -83,7 +84,7 @@ packages. You can quickly find examples by running:
.. code-block:: console
$ cd var/spack/repos/spack_repo/builtin/packages
$ cd var/spack/repos/builtin/packages
$ grep -l QMakePackage */package.py

View File

@@ -272,9 +272,9 @@ often lists dependencies and the flags needed to locate them. The
"environment variables" section lists environment variables that the
build system uses to pass flags to the compiler and linker.
^^^^^^^^^^^^^^^^^^^^^^^^^
Adding flags to configure
^^^^^^^^^^^^^^^^^^^^^^^^^
^^^^^^^^^^^^^^^^^^^^^^^^^^
Addings flags to configure
^^^^^^^^^^^^^^^^^^^^^^^^^^
For most of the flags you encounter, you will want a variant to
optionally enable/disable them. You can then optionally pass these
@@ -285,7 +285,7 @@ function like so:
def configure_args(self):
args = []
...
if self.spec.satisfies("+mpi"):
args.append("--enable-mpi")
else:
@@ -299,10 +299,7 @@ Alternatively, you can use the :ref:`enable_or_disable <autotools_enable_or_dis
.. code-block:: python
def configure_args(self):
args = []
...
args.extend(self.enable_or_disable("mpi"))
return args
return [self.enable_or_disable("mpi")]
Note that we are explicitly disabling MPI support if it is not
@@ -347,14 +344,7 @@ typically used to enable or disable some feature within the package.
default=False,
description="Memchecker support for debugging [degrades performance]"
)
...
def configure_args(self):
args = []
...
args.extend(self.enable_or_disable("memchecker"))
return args
config_args.extend(self.enable_or_disable("memchecker"))
In this example, specifying the variant ``+memchecker`` will generate
the following configuration options:

View File

@@ -27,10 +27,10 @@ it could use the ``require`` directive as follows:
Spack has a number of built-in bundle packages, such as:
* `AmdAocl <https://github.com/spack/spack/blob/develop/var/spack/repos/spack_repo/builtin/packages/amd_aocl/package.py>`_
* `EcpProxyApps <https://github.com/spack/spack/blob/develop/var/spack/repos/spack_repo/builtin/packages/ecp_proxy_apps/package.py>`_
* `Libc <https://github.com/spack/spack/blob/develop/var/spack/repos/spack_repo/builtin/packages/libc/package.py>`_
* `Xsdk <https://github.com/spack/spack/blob/develop/var/spack/repos/spack_repo/builtin/packages/xsdk/package.py>`_
* `AmdAocl <https://github.com/spack/spack/blob/develop/var/spack/repos/builtin/packages/amd-aocl/package.py>`_
* `EcpProxyApps <https://github.com/spack/spack/blob/develop/var/spack/repos/builtin/packages/ecp-proxy-apps/package.py>`_
* `Libc <https://github.com/spack/spack/blob/develop/var/spack/repos/builtin/packages/libc/package.py>`_
* `Xsdk <https://github.com/spack/spack/blob/develop/var/spack/repos/builtin/packages/xsdk/package.py>`_
where ``Xsdk`` also inherits from ``CudaPackage`` and ``RocmPackage`` and
``Libc`` is a virtual bundle package for the C standard library.

View File

@@ -199,7 +199,7 @@ a variant to control this:
However, not every CMake package accepts all four of these options.
Grep the ``CMakeLists.txt`` file to see if the default values are
missing or replaced. For example, the
`dealii <https://github.com/spack/spack/blob/develop/var/spack/repos/spack_repo/builtin/packages/dealii/package.py>`_
`dealii <https://github.com/spack/spack/blob/develop/var/spack/repos/builtin/packages/dealii/package.py>`_
package overrides the default variant with:
.. code-block:: python

View File

@@ -20,8 +20,8 @@ start is to look at the definitions of other build systems. This guide
focuses mostly on how Spack's build systems work.
In this guide, we will be using the
`perl <https://github.com/spack/spack/blob/develop/var/spack/repos/spack_repo/builtin/packages/perl/package.py>`_ and
`cmake <https://github.com/spack/spack/blob/develop/var/spack/repos/spack_repo/builtin/packages/cmake/package.py>`_
`perl <https://github.com/spack/spack/blob/develop/var/spack/repos/builtin/packages/perl/package.py>`_ and
`cmake <https://github.com/spack/spack/blob/develop/var/spack/repos/builtin/packages/cmake/package.py>`_
packages as examples. ``perl``'s build system is a hand-written
``Configure`` shell script, while ``cmake`` bootstraps itself during
installation. Both of these packages require custom build systems.
@@ -56,13 +56,13 @@ If you look at the ``perl`` package, you'll see:
.. code-block:: python
phases = ("configure", "build", "install")
phases = ["configure", "build", "install"]
Similarly, ``cmake`` defines:
.. code-block:: python
phases = ("bootstrap", "build", "install")
phases = ["bootstrap", "build", "install"]
If we look at the ``cmake`` example, this tells Spack's ``PackageBase``
class to run the ``bootstrap``, ``build``, and ``install`` functions

View File

@@ -33,6 +33,9 @@ For more information on a specific package, do::
spack info --all <package-name>
Intel no longer releases new versions of Parallel Studio, which can be
used in Spack via the :ref:`intelpackage`. All of its components can
now be found in oneAPI.
Examples
========
@@ -47,8 +50,34 @@ Install the oneAPI compilers::
spack install intel-oneapi-compilers
Add the compilers to your ``compilers.yaml`` so spack can use them::
To build the ``patchelf`` Spack package with ``icx``, do::
spack compiler add `spack location -i intel-oneapi-compilers`/compiler/latest/bin
Verify that the compilers are available::
spack compiler list
Note that 2024 and later releases do not include ``icc``. Before 2024,
the package layout was different::
spack compiler add `spack location -i intel-oneapi-compilers`/compiler/latest/linux/bin/intel64
spack compiler add `spack location -i intel-oneapi-compilers`/compiler/latest/linux/bin
The ``intel-oneapi-compilers`` package includes 2 families of
compilers:
* ``intel``: ``icc``, ``icpc``, ``ifort``. Intel's *classic*
compilers. 2024 and later releases contain ``ifort``, but not
``icc`` and ``icpc``.
* ``oneapi``: ``icx``, ``icpx``, ``ifx``. Intel's new generation of
compilers based on LLVM.
To build the ``patchelf`` Spack package with ``icc``, do::
spack install patchelf%intel
To build with with ``icx``, do ::
spack install patchelf%oneapi
@@ -63,6 +92,15 @@ Install the oneAPI compilers::
spack install intel-oneapi-compilers
Add the compilers to your ``compilers.yaml`` so Spack can use them::
spack compiler add `spack location -i intel-oneapi-compilers`/compiler/latest/bin
spack compiler add `spack location -i intel-oneapi-compilers`/compiler/latest/bin
Verify that the compilers are available::
spack compiler list
Clone `spack-configs <https://github.com/spack/spack-configs>`_ repo and activate Intel oneAPI CPU environment::
git clone https://github.com/spack/spack-configs
@@ -111,7 +149,7 @@ Compilers
---------
To use the compilers, add some information about the installation to
``packages.yaml``. For most users, it is sufficient to do::
``compilers.yaml``. For most users, it is sufficient to do::
spack compiler add /opt/intel/oneapi/compiler/latest/bin
@@ -119,7 +157,7 @@ Adapt the paths above if you did not install the tools in the default
location. After adding the compilers, using them is the same
as if you had installed the ``intel-oneapi-compilers`` package.
Another option is to manually add the configuration to
``packages.yaml`` as described in :ref:`Compiler configuration
``compilers.yaml`` as described in :ref:`Compiler configuration
<compiler-config>`.
Before 2024, the directory structure was different::
@@ -162,5 +200,15 @@ You can also use Spack-installed libraries. For example::
Will update your environment CPATH, LIBRARY_PATH, and other
environment variables for building an application with oneMKL.
More information
================
This section describes basic use of oneAPI, especially if it has
changed compared to Parallel Studio. See :ref:`intelpackage` for more
information on :ref:`intel-virtual-packages`,
:ref:`intel-unrelated-packages`,
:ref:`intel-integrating-external-libraries`, and
:ref:`using-mkl-tips`.
.. _`Intel installers`: https://software.intel.com/content/www/us/en/develop/documentation/installation-guide-for-intel-oneapi-toolkits-linux/top.html

File diff suppressed because it is too large Load Diff

View File

@@ -91,14 +91,14 @@ there are any other variables you need to set, you can do this in the
.. code-block:: python
def setup_build_environment(self, env: EnvironmentModifications) -> None:
def setup_build_environment(self, env):
env.set("PREFIX", prefix)
env.set("BLASLIB", spec["blas"].libs.ld_flags)
`cbench <https://github.com/spack/spack/blob/develop/var/spack/repos/spack_repo/builtin/packages/cbench/package.py>`_
`cbench <https://github.com/spack/spack/blob/develop/var/spack/repos/builtin/packages/cbench/package.py>`_
is a good example of a simple package that does this, while
`esmf <https://github.com/spack/spack/blob/develop/var/spack/repos/spack_repo/builtin/packages/esmf/package.py>`_
`esmf <https://github.com/spack/spack/blob/develop/var/spack/repos/builtin/packages/esmf/package.py>`_
is a good example of a more complex package.
""""""""""""""""""""""
@@ -129,7 +129,7 @@ If you do need access to the spec, you can create a property like so:
]
`cloverleaf <https://github.com/spack/spack/blob/develop/var/spack/repos/spack_repo/builtin/packages/cloverleaf/package.py>`_
`cloverleaf <https://github.com/spack/spack/blob/develop/var/spack/repos/builtin/packages/cloverleaf/package.py>`_
is a good example of a package that uses this strategy.
"""""""""""""
@@ -152,7 +152,7 @@ and a ``filter`` method to help with this. For example:
makefile.filter(r"^\s*FC\s*=.*", f"FC = {spack_fc}")
`stream <https://github.com/spack/spack/blob/develop/var/spack/repos/spack_repo/builtin/packages/stream/package.py>`_
`stream <https://github.com/spack/spack/blob/develop/var/spack/repos/builtin/packages/stream/package.py>`_
is a good example of a package that involves editing a Makefile to set
the appropriate variables.
@@ -192,7 +192,7 @@ well for storing variables:
inc.write(f"{key} = {config[key]}\n")
`elk <https://github.com/spack/spack/blob/develop/var/spack/repos/spack_repo/builtin/packages/elk/package.py>`_
`elk <https://github.com/spack/spack/blob/develop/var/spack/repos/builtin/packages/elk/package.py>`_
is a good example of a package that uses a dictionary to store
configuration variables.
@@ -213,7 +213,7 @@ them in a list:
inc.write(f"{var}\n")
`hpl <https://github.com/spack/spack/blob/develop/var/spack/repos/spack_repo/builtin/packages/hpl/package.py>`_
`hpl <https://github.com/spack/spack/blob/develop/var/spack/repos/builtin/packages/hpl/package.py>`_
is a good example of a package that uses a list to store
configuration variables.

View File

@@ -12,7 +12,8 @@ The ``ROCmPackage`` is not a build system but a helper package. Like ``CudaPacka
it provides standard variants, dependencies, and conflicts to facilitate building
packages using GPUs though for AMD in this case.
You can find the source for this package (and suggestions for setting up your ``packages.yaml`` file) at
You can find the source for this package (and suggestions for setting up your
``compilers.yaml`` and ``packages.yaml`` files) at
`<https://github.com/spack/spack/blob/develop/lib/spack/spack/build_systems/rocm.py>`__.
^^^^^^^^

View File

@@ -39,7 +39,7 @@ for "CRAN <package-name>" and you should quickly find what you want.
If it isn't on CRAN, try Bioconductor, another common R repository.
For the purposes of this tutorial, we will be walking through
`r-caret <https://github.com/spack/spack/blob/develop/var/spack/repos/spack_repo/builtin/packages/r_caret/package.py>`_
`r-caret <https://github.com/spack/spack/blob/develop/var/spack/repos/builtin/packages/r-caret/package.py>`_
as an example. If you search for "CRAN caret", you will quickly find what
you are looking for at https://cran.r-project.org/package=caret.
https://cran.r-project.org is the main CRAN website. However, CRAN also
@@ -337,7 +337,7 @@ Non-R dependencies
^^^^^^^^^^^^^^^^^^
Some packages depend on non-R libraries for linking. Check out the
`r-stringi <https://github.com/spack/spack/blob/develop/var/spack/repos/spack_repo/builtin/packages/r_stringi/package.py>`_
`r-stringi <https://github.com/spack/spack/blob/develop/var/spack/repos/builtin/packages/r-stringi/package.py>`_
package for an example: https://cloud.r-project.org/package=stringi.
If you search for the text "SystemRequirements", you will see:
@@ -352,7 +352,7 @@ Passing arguments to the installation
Some R packages provide additional flags that can be passed to
``R CMD INSTALL``, often to locate non-R dependencies.
`r-rmpi <https://github.com/spack/spack/blob/develop/var/spack/repos/spack_repo/builtin/packages/r_rmpi/package.py>`_
`r-rmpi <https://github.com/spack/spack/blob/develop/var/spack/repos/builtin/packages/r-rmpi/package.py>`_
is an example of this, and flags for linking to an MPI library. To pass
these to the installation command, you can override ``configure_args``
like so:

View File

@@ -104,10 +104,10 @@ Finding available options
The first place to start when looking for a list of valid options to
build a package is ``scons --help``. Some packages like
`kahip <https://github.com/spack/spack/blob/develop/var/spack/repos/spack_repo/builtin/packages/kahip/package.py>`_
`kahip <https://github.com/spack/spack/blob/develop/var/spack/repos/builtin/packages/kahip/package.py>`_
don't bother overwriting the default SCons help message, so this isn't
very useful, but other packages like
`serf <https://github.com/spack/spack/blob/develop/var/spack/repos/spack_repo/builtin/packages/serf/package.py>`_
`serf <https://github.com/spack/spack/blob/develop/var/spack/repos/builtin/packages/serf/package.py>`_
print a list of valid command-line variables:
.. code-block:: console
@@ -177,7 +177,7 @@ print a list of valid command-line variables:
More advanced packages like
`cantera <https://github.com/spack/spack/blob/develop/var/spack/repos/spack_repo/builtin/packages/cantera/package.py>`_
`cantera <https://github.com/spack/spack/blob/develop/var/spack/repos/builtin/packages/cantera/package.py>`_
use ``scons --help`` to print a list of subcommands:
.. code-block:: console

View File

@@ -223,16 +223,6 @@ def setup(sphinx):
("py:class", "spack.compiler.CompilerCache"),
# TypeVar that is not handled correctly
("py:class", "llnl.util.lang.T"),
("py:class", "llnl.util.lang.KT"),
("py:class", "llnl.util.lang.VT"),
("py:class", "llnl.util.lang.K"),
("py:class", "llnl.util.lang.V"),
("py:class", "llnl.util.lang.ClassPropertyType"),
("py:obj", "llnl.util.lang.KT"),
("py:obj", "llnl.util.lang.VT"),
("py:obj", "llnl.util.lang.ClassPropertyType"),
("py:obj", "llnl.util.lang.K"),
("py:obj", "llnl.util.lang.V"),
]
# The reST default role (used for this markup: `text`) to use for all documents.

View File

@@ -125,8 +125,6 @@ are stored in ``$spack/var/spack/cache``. These are stored indefinitely
by default. Can be purged with :ref:`spack clean --downloads
<cmd-spack-clean>`.
.. _Misc Cache:
--------------------
``misc_cache``
--------------------
@@ -148,16 +146,15 @@ this can expose you to attacks. Use at your own risk.
``ssl_certs``
--------------------
Path to custom certificats for SSL verification. The value can be a
Path to custom certificats for SSL verification. The value can be a
filesytem path, or an environment variable that expands to an absolute file path.
The default value is set to the environment variable ``SSL_CERT_FILE``
to use the same syntax used by many other applications that automatically
detect custom certificates.
When ``url_fetch_method:curl`` the ``config:ssl_certs`` should resolve to
a single file. Spack will then set the environment variable ``CURL_CA_BUNDLE``
in the subprocess calling ``curl``. If additional ``curl`` arguments are required,
they can be set in the config, e.g. ``url_fetch_method:'curl -k -q'``.
If ``url_fetch_method:urllib`` then files and directories are supported i.e.
in the subprocess calling ``curl``.
If ``url_fetch_method:urllib`` then files and directories are supported i.e.
``config:ssl_certs:$SSL_CERT_FILE`` or ``config:ssl_certs:$SSL_CERT_DIR``
will work.
In all cases the expanded path must be absolute for Spack to use the certificates.
@@ -337,52 +334,3 @@ create a new alias called ``inst`` that will always call ``install -v``:
aliases:
inst: install -v
-------------------------------
``concretization_cache:enable``
-------------------------------
When set to ``true``, Spack will utilize a cache of solver outputs from
successful concretization runs. When enabled, Spack will check the concretization
cache prior to running the solver. If a previous request to solve a given
problem is present in the cache, Spack will load the concrete specs and other
solver data from the cache rather than running the solver. Specs not previously
concretized will be added to the cache on a successful solve. The cache additionally
holds solver statistics, so commands like ``spack solve`` will still return information
about the run that produced a given solver result.
This cache is a subcache of the :ref:`Misc Cache` and as such will be cleaned when the Misc
Cache is cleaned.
When ``false`` or ommitted, all concretization requests will be performed from scatch
----------------------------
``concretization_cache:url``
----------------------------
Path to the location where Spack will root the concretization cache. Currently this only supports
paths on the local filesystem.
Default location is under the :ref:`Misc Cache` at: ``$misc_cache/concretization``
------------------------------------
``concretization_cache:entry_limit``
------------------------------------
Sets a limit on the number of concretization results that Spack will cache. The limit is evaluated
after each concretization run; if Spack has stored more results than the limit allows, the
oldest concretization results are pruned until 10% of the limit has been removed.
Setting this value to 0 disables the automatic pruning. It is expected users will be
responsible for maintaining this cache.
-----------------------------------
``concretization_cache:size_limit``
-----------------------------------
Sets a limit on the size of the concretization cache in bytes. The limit is evaluated
after each concretization run; if Spack has stored more results than the limit allows, the
oldest concretization results are pruned until 10% of the limit has been removed.
Setting this value to 0 disables the automatic pruning. It is expected users will be
responsible for maintaining this cache.

View File

@@ -11,10 +11,9 @@ Configuration Files
Spack has many configuration files. Here is a quick list of them, in
case you want to skip directly to specific docs:
* :ref:`packages.yaml <compiler-config>`
* :ref:`compilers.yaml <compiler-config>`
* :ref:`concretizer.yaml <concretizer-options>`
* :ref:`config.yaml <config-yaml>`
* :ref:`include.yaml <include-yaml>`
* :ref:`mirrors.yaml <mirrors>`
* :ref:`modules.yaml <modules>`
* :ref:`packages.yaml <packages-config>`
@@ -46,12 +45,6 @@ Each Spack configuration file is nested under a top-level section
corresponding to its name. So, ``config.yaml`` starts with ``config:``,
``mirrors.yaml`` starts with ``mirrors:``, etc.
.. tip::
Validation and autocompletion of Spack config files can be enabled in
your editor with the YAML language server. See `spack/schemas
<https://github.com/spack/schemas>`_ for more information.
.. _configuration-scopes:
--------------------
@@ -101,7 +94,7 @@ are six configuration scopes. From lowest to highest:
precedence over all other scopes.
Each configuration directory may contain several configuration files,
such as ``config.yaml``, ``packages.yaml``, or ``mirrors.yaml``. When
such as ``config.yaml``, ``compilers.yaml``, or ``mirrors.yaml``. When
configurations conflict, settings from higher-precedence scopes override
lower-precedence settings.

View File

@@ -226,9 +226,9 @@ If all is well, you'll see something like this:
Modified files:
var/spack/repos/spack_repo/builtin/packages/hdf5/package.py
var/spack/repos/spack_repo/builtin/packages/hdf/package.py
var/spack/repos/spack_repo/builtin/packages/netcdf/package.py
var/spack/repos/builtin/packages/hdf5/package.py
var/spack/repos/builtin/packages/hdf/package.py
var/spack/repos/builtin/packages/netcdf/package.py
=======================================================
Flake8 checks were clean.
@@ -236,9 +236,9 @@ However, if you aren't compliant with PEP 8, flake8 will complain:
.. code-block:: console
var/spack/repos/spack_repo/builtin/packages/netcdf/package.py:26: [F401] 'os' imported but unused
var/spack/repos/spack_repo/builtin/packages/netcdf/package.py:61: [E303] too many blank lines (2)
var/spack/repos/spack_repo/builtin/packages/netcdf/package.py:106: [E501] line too long (92 > 79 characters)
var/spack/repos/builtin/packages/netcdf/package.py:26: [F401] 'os' imported but unused
var/spack/repos/builtin/packages/netcdf/package.py:61: [E303] too many blank lines (2)
var/spack/repos/builtin/packages/netcdf/package.py:106: [E501] line too long (92 > 79 characters)
Flake8 found errors.
Most of the error messages are straightforward, but if you don't understand what
@@ -280,7 +280,7 @@ All of these can be installed with Spack, e.g.
.. warning::
Sphinx has `several required dependencies <https://github.com/spack/spack/blob/develop/var/spack/repos/spack_repo/builtin/packages/py-sphinx/package.py>`_.
Sphinx has `several required dependencies <https://github.com/spack/spack/blob/develop/var/spack/repos/builtin/packages/py-sphinx/package.py>`_.
If you're using a ``python`` from Spack and you installed
``py-sphinx`` and friends, you need to make them available to your
``python``. The easiest way to do this is to run:
@@ -361,6 +361,7 @@ and the tags associated with the class of runners to build on.
* ``.linux_neoverse_n1``
* ``.linux_neoverse_v1``
* ``.linux_neoverse_v2``
* ``.linux_power``
* ``.linux_skylake``
* ``.linux_x86_64``
* ``.linux_x86_64_v4``

View File

@@ -154,7 +154,9 @@ Package-related modules
:mod:`spack.util.naming`
Contains functions for mapping between Spack package names,
Python module names, and Python class names.
Python module names, and Python class names. Functions like
:func:`~spack.util.naming.mod_to_class` handle mapping package
module names to class names.
:mod:`spack.directives`
*Directives* are functions that can be called inside a package definition
@@ -541,10 +543,10 @@ With either interpreter you can run a single command:
.. code-block:: console
$ spack python -c 'from spack.concretize import concretize_one; concretize_one("python")'
$ spack python -c 'from spack.spec import Spec; Spec("python").concretized()'
...
$ spack python -i ipython -c 'from spack.concretize import concretize_one; concretize_one("python")'
$ spack python -i ipython -c 'from spack.spec import Spec; Spec("python").concretized()'
Out[1]: ...
or a file:

View File

@@ -1,34 +0,0 @@
.. Copyright Spack Project Developers. See COPYRIGHT file for details.
SPDX-License-Identifier: (Apache-2.0 OR MIT)
.. _env-vars-yaml:
=============================================
Environment Variable Settings (env_vars.yaml)
=============================================
Spack allows you to include shell environment variable modifications
for a spack environment by including an ``env_vars.yaml``. Environment
varaibles can be modified by setting, unsetting, appending, and prepending
variables in the shell environment.
The changes to the shell environment will take effect when the spack
environment is activated.
for example,
.. code-block:: yaml
env_vars:
set:
ENVAR_TO_SET_IN_ENV_LOAD: "FOO"
unset:
ENVAR_TO_UNSET_IN_ENV_LOAD:
prepend_path:
PATH_LIST: "path/to/prepend"
append_path:
PATH_LIST: "path/to/append"
remove_path:
PATH_LIST: "path/to/remove"

View File

@@ -112,19 +112,6 @@ the original but may concretize differently in the presence of different
explicit or default configuration settings (e.g., a different version of
Spack or for a different user account).
Environments created from a manifest will copy any included configs
from relative paths inside the environment. Relative paths from
outside the environment will cause errors, and absolute paths will be
kept absolute. For example, if ``spack.yaml`` includes:
.. code-block:: yaml
spack:
include: [./config.yaml]
then the created environment will have its own copy of the file
``config.yaml`` copied from the location in the original environment.
Create an environment from a ``spack.lock`` file using:
.. code-block:: console
@@ -173,7 +160,7 @@ accepts. If an environment already exists then spack will simply activate it
and ignore the create-specific flags.
.. code-block:: console
$ spack env activate --create -p myenv
# ...
# [creates if myenv does not exist yet]
@@ -437,8 +424,8 @@ Developing Packages in a Spack Environment
The ``spack develop`` command allows one to develop Spack packages in
an environment. It requires a spec containing a concrete version, and
will configure Spack to install the package from local source.
If a version is not provided from the command line interface then spack
will configure Spack to install the package from local source.
If a version is not provided from the command line interface then spack
will automatically pick the highest version the package has defined.
This means any infinity versions (``develop``, ``main``, ``stable``) will be
preferred in this selection process.
@@ -448,22 +435,15 @@ set, and Spack will ensure the package and its dependents are rebuilt
any time the environment is installed if the package's local source
code has been modified. Spack's native implementation to check for modifications
is to check if ``mtime`` is newer than the installation.
A custom check can be created by overriding the ``detect_dev_src_change`` method
in your package class. This is particularly useful for projects using custom spack repo's
to drive development and want to optimize performance.
A custom check can be created by overriding the ``detect_dev_src_change`` method
in your package class. This is particularly useful for projects using custom spack repo's
to drive development and want to optimize performance.
Spack ensures that all instances of a
developed package in the environment are concretized to match the
version (and other constraints) passed as the spec argument to the
``spack develop`` command.
When working deep in the graph it is often desirable to have multiple specs marked
as ``develop`` so you don't have to restage and/or do full rebuilds each time you
call ``spack install``. The ``--recursive`` flag can be used in these scenarios
to ensure that all the dependents of the initial spec you provide are also marked
as develop specs. The ``--recursive`` flag requires a pre-concretized environment
so the graph can be traversed from the supplied spec all the way to the root specs.
For packages with ``git`` attributes, git branches, tags, and commits can
also be used as valid concrete versions (see :ref:`version-specifier`).
This means that for a package ``foo``, ``spack develop foo@git.main`` will clone
@@ -473,7 +453,7 @@ Further development on ``foo`` can be tested by re-installing the environment,
and eventually committed and pushed to the upstream git repo.
If the package being developed supports out-of-source builds then users can use the
``--build_directory`` flag to control the location and name of the build directory.
``--build_directory`` flag to control the location and name of the build directory.
This is a shortcut to set the ``package_attributes:build_directory`` in the
``packages`` configuration (see :ref:`assigning-package-attributes`).
The supplied location will become the build-directory for that package in all future builds.
@@ -667,56 +647,34 @@ a ``packages.yaml`` file) could contain:
# ...
packages:
all:
providers:
mpi: [openmpi]
compiler: [intel]
# ...
This configuration sets the default mpi provider to be openmpi.
This configuration sets the default compiler for all packages to
``intel``.
^^^^^^^^^^^^^^^^^^^^^^^
Included configurations
^^^^^^^^^^^^^^^^^^^^^^^
Spack environments allow an ``include`` heading in their yaml schema.
This heading pulls in external configuration files and applies them to
the environment.
Spack environments allow an ``include`` heading in their yaml
schema. This heading pulls in external configuration files and applies
them to the environment.
.. code-block:: yaml
spack:
include:
- environment/relative/path/to/config.yaml
- path: https://github.com/path/to/raw/config/compilers.yaml
sha256: 26e871804a92cd07bb3d611b31b4156ae93d35b6a6d6e0ef3a67871fcb1d258b
- relative/path/to/config.yaml
- https://github.com/path/to/raw/config/compilers.yaml
- /absolute/path/to/packages.yaml
- path: /path/to/$os/$target/environment
optional: true
- path: /path/to/os-specific/config-dir
when: os == "ventura"
Included configuration files are required *unless* they are explicitly optional
or the entry's condition evaluates to ``false``. Optional includes are specified
with the ``optional`` clause and conditional with the ``when`` clause. (See
:ref:`include-yaml` for more information on optional and conditional entries.)
Files are listed using paths to individual files or directories containing them.
Path entries may be absolute or relative to the environment or specified as
URLs. URLs to individual files must link to the **raw** form of the file's
contents (e.g., `GitHub
<https://docs.github.com/en/repositories/working-with-files/using-files/viewing-and-understanding-files#viewing-or-copying-the-raw-file-content>`_
or `GitLab
<https://docs.gitlab.com/ee/api/repository_files.html#get-raw-file-from-repository>`_) **and** include a valid sha256 for the file.
Only the ``file``, ``ftp``, ``http`` and ``https`` protocols (or schemes) are
supported. Spack-specific, environment and user path variables can be used.
(See :ref:`config-file-variables` for more information.)
.. warning::
Recursive includes are not currently processed in a breadth-first manner
so the value of a configuration option that is altered by multiple included
files may not be what you expect. This will be addressed in a future
update.
Environments can include files or URLs. File paths can be relative or
absolute. URLs include the path to the text for individual files or
can be the path to a directory containing configuration files.
Spack supports ``file``, ``http``, ``https`` and ``ftp`` protocols (or
schemes). Spack-specific, environment and user path variables may be
used in these paths. See :ref:`config-file-variables` for more information.
^^^^^^^^^^^^^^^^^^^^^^^^
Configuration precedence
@@ -1000,28 +958,6 @@ For example, the following environment has three root packages:
This allows for a much-needed reduction in redundancy between packages
and constraints.
-------------------------------
Modifying Environment Variables
-------------------------------
Spack Environments can modify the active shell's environment variables when activated. The environment can be
configured to set, unset, prepend, or append using ``env_vars`` configuration in the ``spack.yaml`` or through config scopes
file:
.. code-block:: yaml
spack:
env_vars:
set:
ENVAR_TO_SET_IN_ENV_LOAD: "FOO"
unset:
ENVAR_TO_UNSET_IN_ENV_LOAD:
prepend_path:
PATH_LIST: "path/to/prepend"
append_path:
PATH_LIST: "path/to/append"
remove_path:
PATH_LIST: "path/to/remove"
-----------------
Environment Views

View File

@@ -0,0 +1,161 @@
spack:
definitions:
- compiler-pkgs:
- 'llvm+clang@6.0.1 os=centos7'
- 'gcc@6.5.0 os=centos7'
- 'llvm+clang@6.0.1 os=ubuntu18.04'
- 'gcc@6.5.0 os=ubuntu18.04'
- pkgs:
- readline@7.0
# - xsdk@0.4.0
- compilers:
- '%gcc@5.5.0'
- '%gcc@6.5.0'
- '%gcc@7.3.0'
- '%clang@6.0.0'
- '%clang@6.0.1'
- oses:
- os=ubuntu18.04
- os=centos7
specs:
- matrix:
- [$pkgs]
- [$compilers]
- [$oses]
exclude:
- '%gcc@7.3.0 os=centos7'
- '%gcc@5.5.0 os=ubuntu18.04'
mirrors:
cloud_gitlab: https://mirror.spack.io
compilers:
# The .gitlab-ci.yml for this project picks a Docker container which does
# not have any compilers pre-built and ready to use, so we need to fake the
# existence of those here.
- compiler:
operating_system: centos7
modules: []
paths:
cc: /not/used
cxx: /not/used
f77: /not/used
fc: /not/used
spec: gcc@5.5.0
target: x86_64
- compiler:
operating_system: centos7
modules: []
paths:
cc: /not/used
cxx: /not/used
f77: /not/used
fc: /not/used
spec: gcc@6.5.0
target: x86_64
- compiler:
operating_system: centos7
modules: []
paths:
cc: /not/used
cxx: /not/used
f77: /not/used
fc: /not/used
spec: clang@6.0.0
target: x86_64
- compiler:
operating_system: centos7
modules: []
paths:
cc: /not/used
cxx: /not/used
f77: /not/used
fc: /not/used
spec: clang@6.0.1
target: x86_64
- compiler:
operating_system: ubuntu18.04
modules: []
paths:
cc: /not/used
cxx: /not/used
f77: /not/used
fc: /not/used
spec: clang@6.0.0
target: x86_64
- compiler:
operating_system: ubuntu18.04
modules: []
paths:
cc: /not/used
cxx: /not/used
f77: /not/used
fc: /not/used
spec: clang@6.0.1
target: x86_64
- compiler:
operating_system: ubuntu18.04
modules: []
paths:
cc: /not/used
cxx: /not/used
f77: /not/used
fc: /not/used
spec: gcc@6.5.0
target: x86_64
- compiler:
operating_system: ubuntu18.04
modules: []
paths:
cc: /not/used
cxx: /not/used
f77: /not/used
fc: /not/used
spec: gcc@7.3.0
target: x86_64
gitlab-ci:
bootstrap:
- name: compiler-pkgs
compiler-agnostic: true
mappings:
- # spack-cloud-ubuntu
match:
# these are specs, if *any* match the spec under consideration, this
# 'mapping' will be used to generate the CI job
- os=ubuntu18.04
runner-attributes:
# 'tags' and 'image' go directly onto the job, 'variables' will
# be added to what we already necessarily create for the job as
# a part of the CI workflow
tags:
- spack-k8s
image:
name: scottwittenburg/spack_builder_ubuntu_18.04
entrypoint: [""]
- # spack-cloud-centos
match:
# these are specs, if *any* match the spec under consideration, this
# 'mapping' will be used to generate the CI job
- 'os=centos7'
runner-attributes:
tags:
- spack-k8s
image:
name: scottwittenburg/spack_builder_centos_7
entrypoint: [""]
cdash:
build-group: Release Testing
url: http://cdash
project: Spack Testing
site: Spack Docker-Compose Workflow
repos: []
upstreams: {}
modules:
enable: []
packages: {}
config: {}

View File

@@ -131,7 +131,7 @@ creates a simple python file:
It doesn't take much python coding to get from there to a working
package:
.. literalinclude:: _spack_root/var/spack/repos/spack_repo/builtin/packages/libelf/package.py
.. literalinclude:: _spack_root/var/spack/repos/builtin/packages/libelf/package.py
:lines: 5-
Spack also provides wrapper functions around common commands like

View File

@@ -30,7 +30,7 @@ than always choosing the latest versions or default variants.
.. note::
As a rule of thumb: requirements + constraints > strong preferences > reuse > preferences > defaults.
As a rule of thumb: requirements + constraints > reuse > preferences > defaults.
The following set of criteria (from lowest to highest precedence) explain
common cases where concretization output may seem surprising at first.
@@ -56,19 +56,7 @@ common cases where concretization output may seem surprising at first.
concretizer:
reuse: dependencies # other options are 'true' and 'false'
3. :ref:`Strong preferences <package-strong-preferences>` configured in ``packages.yaml``
are higher priority than reuse, and can be used to strongly prefer a specific version
or variant, without erroring out if it's not possible. Strong preferences are specified
as follows:
.. code-block:: yaml
packages:
foo:
prefer:
- "@1.1: ~mpi"
4. :ref:`Package requirements <package-requirements>` configured in ``packages.yaml``,
3. :ref:`Package requirements <package-requirements>` configured in ``packages.yaml``,
and constraints from the command line as well as ``package.py`` files override all
of the above. Requirements are specified as follows:
@@ -78,8 +66,6 @@ common cases where concretization output may seem surprising at first.
foo:
require:
- "@1.2: +mpi"
conflicts:
- "@1.4"
Requirements and constraints restrict the set of possible solutions, while reuse
behavior and preferences influence what an optimal solution looks like.

View File

@@ -254,11 +254,12 @@ directory.
Compiler configuration
----------------------
Spack has the ability to build packages with multiple compilers and compiler versions.
Compilers can be made available to Spack by specifying them manually in ``packages.yaml``,
or automatically by running ``spack compiler find``.
For convenience, Spack will automatically detect compilers the first time it needs them,
if none is available.
Spack has the ability to build packages with multiple compilers and
compiler versions. Compilers can be made available to Spack by
specifying them manually in ``compilers.yaml`` or ``packages.yaml``,
or automatically by running ``spack compiler find``, but for
convenience Spack will automatically detect compilers the first time
it needs them.
.. _cmd-spack-compilers:
@@ -273,11 +274,16 @@ compilers`` or ``spack compiler list``:
$ spack compilers
==> Available compilers
-- gcc ubuntu20.04-x86_64 ---------------------------------------
gcc@9.4.0 gcc@8.4.0 gcc@10.5.0
-- llvm ubuntu20.04-x86_64 --------------------------------------
llvm@12.0.0 llvm@11.0.0 llvm@10.0.0
-- gcc ---------------------------------------------------------
gcc@4.9.0 gcc@4.8.0 gcc@4.7.0 gcc@4.6.2 gcc@4.4.7
gcc@4.8.2 gcc@4.7.1 gcc@4.6.3 gcc@4.6.1 gcc@4.1.2
-- intel -------------------------------------------------------
intel@15.0.0 intel@14.0.0 intel@13.0.0 intel@12.1.0 intel@10.0
intel@14.0.3 intel@13.1.1 intel@12.1.5 intel@12.0.4 intel@9.1
intel@14.0.2 intel@13.1.0 intel@12.1.3 intel@11.1
intel@14.0.1 intel@13.0.1 intel@12.1.2 intel@10.1
-- clang -------------------------------------------------------
clang@3.4 clang@3.3 clang@3.2 clang@3.1
Any of these compilers can be used to build Spack packages. More on
how this is done is in :ref:`sec-specs`.
@@ -296,22 +302,16 @@ An alias for ``spack compiler find``.
``spack compiler find``
^^^^^^^^^^^^^^^^^^^^^^^
If you do not see a compiler in the list shown by:
Lists the compilers currently available to Spack. If you do not see
a compiler in this list, but you want to use it with Spack, you can
simply run ``spack compiler find`` with the path to where the
compiler is installed. For example:
.. code-block:: console
$ spack compiler list
but you want to use it with Spack, you can simply run ``spack compiler find`` with the
path to where the compiler is installed. For example:
.. code-block:: console
$ spack compiler find /opt/intel/oneapi/compiler/2025.1/bin/
==> Added 1 new compiler to /home/user/.spack/packages.yaml
intel-oneapi-compilers@2025.1.0
==> Compilers are defined in the following files:
/home/user/.spack/packages.yaml
$ spack compiler find /usr/local/tools/ic-13.0.079
==> Added 1 new compiler to ~/.spack/linux/compilers.yaml
intel@13.0.079
Or you can run ``spack compiler find`` with no arguments to force
auto-detection. This is useful if you do not know where compilers are
@@ -322,7 +322,7 @@ installed, but you know that new compilers have been added to your
$ module load gcc/4.9.0
$ spack compiler find
==> Added 1 new compiler to /home/user/.spack/packages.yaml
==> Added 1 new compiler to ~/.spack/linux/compilers.yaml
gcc@4.9.0
This loads the environment module for gcc-4.9.0 to add it to
@@ -331,7 +331,7 @@ This loads the environment module for gcc-4.9.0 to add it to
.. note::
By default, spack does not fill in the ``modules:`` field in the
``packages.yaml`` file. If you are using a compiler from a
``compilers.yaml`` file. If you are using a compiler from a
module, then you should add this field manually.
See the section on :ref:`compilers-requiring-modules`.
@@ -341,82 +341,91 @@ This loads the environment module for gcc-4.9.0 to add it to
``spack compiler info``
^^^^^^^^^^^^^^^^^^^^^^^
If you want to see additional information on some specific compilers, you can run ``spack compiler info`` on it:
If you want to see specifics on a particular compiler, you can run
``spack compiler info`` on it:
.. code-block:: console
$ spack compiler info gcc
gcc@=8.4.0 languages='c,c++,fortran' arch=linux-ubuntu20.04-x86_64:
prefix: /usr
compilers:
c: /usr/bin/gcc-8
cxx: /usr/bin/g++-8
fortran: /usr/bin/gfortran-8
$ spack compiler info intel@15
intel@15.0.0:
paths:
cc = /usr/local/bin/icc-15.0.090
cxx = /usr/local/bin/icpc-15.0.090
f77 = /usr/local/bin/ifort-15.0.090
fc = /usr/local/bin/ifort-15.0.090
modules = []
operating_system = centos6
...
gcc@=9.4.0 languages='c,c++,fortran' arch=linux-ubuntu20.04-x86_64:
prefix: /usr
compilers:
c: /usr/bin/gcc
cxx: /usr/bin/g++
fortran: /usr/bin/gfortran
gcc@=10.5.0 languages='c,c++,fortran' arch=linux-ubuntu20.04-x86_64:
prefix: /usr
compilers:
c: /usr/bin/gcc-10
cxx: /usr/bin/g++-10
fortran: /usr/bin/gfortran-10
This shows the details of the compilers that were detected by Spack.
Notice also that we didn't have to be too specific about the version. We just said ``gcc``, and we got information
about all the matching compilers.
This shows which C, C++, and Fortran compilers were detected by Spack.
Notice also that we didn't have to be too specific about the
version. We just said ``intel@15``, and information about the only
matching Intel compiler was displayed.
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
Manual compiler configuration
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
If auto-detection fails, you can manually configure a compiler by editing your ``~/.spack/packages.yaml`` file.
You can do this by running ``spack config edit packages``, which will open the file in
If auto-detection fails, you can manually configure a compiler by
editing your ``~/.spack/<platform>/compilers.yaml`` file. You can do this by running
``spack config edit compilers``, which will open the file in
:ref:`your favorite editor <controlling-the-editor>`.
Each compiler has an "external" entry in the file with some ``extra_attributes``:
Each compiler configuration in the file looks like this:
.. code-block:: yaml
packages:
gcc:
externals:
- spec: gcc@10.5.0 languages='c,c++,fortran'
prefix: /usr
extra_attributes:
compilers:
c: /usr/bin/gcc-10
cxx: /usr/bin/g++-10
fortran: /usr/bin/gfortran-10
compilers:
- compiler:
modules: []
operating_system: centos6
paths:
cc: /usr/local/bin/icc-15.0.024-beta
cxx: /usr/local/bin/icpc-15.0.024-beta
f77: /usr/local/bin/ifort-15.0.024-beta
fc: /usr/local/bin/ifort-15.0.024-beta
spec: intel@15.0.0
The compiler executables are listed under ``extra_attributes:compilers``, and are keyed by language.
Once you save the file, the configured compilers will show up in the list displayed by ``spack compilers``.
For compilers that do not support Fortran (like ``clang``), put
``None`` for ``f77`` and ``fc``:
You can also add compiler flags to manually configured compilers. These flags should be specified in the
``flags`` section of the compiler specification. The valid flags are ``cflags``, ``cxxflags``, ``fflags``,
.. code-block:: yaml
compilers:
- compiler:
modules: []
operating_system: centos6
paths:
cc: /usr/bin/clang
cxx: /usr/bin/clang++
f77: None
fc: None
spec: clang@3.3svn
Once you save the file, the configured compilers will show up in the
list displayed by ``spack compilers``.
You can also add compiler flags to manually configured compilers. These
flags should be specified in the ``flags`` section of the compiler
specification. The valid flags are ``cflags``, ``cxxflags``, ``fflags``,
``cppflags``, ``ldflags``, and ``ldlibs``. For example:
.. code-block:: yaml
packages:
gcc:
externals:
- spec: gcc@10.5.0 languages='c,c++,fortran'
prefix: /usr
extra_attributes:
compilers:
c: /usr/bin/gcc-10
cxx: /usr/bin/g++-10
fortran: /usr/bin/gfortran-10
flags:
cflags: -O3 -fPIC
cxxflags: -O3 -fPIC
cppflags: -O3 -fPIC
compilers:
- compiler:
modules: []
operating_system: centos6
paths:
cc: /usr/bin/gcc
cxx: /usr/bin/g++
f77: /usr/bin/gfortran
fc: /usr/bin/gfortran
flags:
cflags: -O3 -fPIC
cxxflags: -O3 -fPIC
cppflags: -O3 -fPIC
spec: gcc@4.7.2
These flags will be treated by spack as if they were entered from
the command line each time this compiler is used. The compiler wrappers
@@ -431,44 +440,95 @@ These variables should be specified in the ``environment`` section of the compil
specification. The operations available to modify the environment are ``set``, ``unset``,
``prepend_path``, ``append_path``, and ``remove_path``. For example:
.. code-block:: yaml
compilers:
- compiler:
modules: []
operating_system: centos6
paths:
cc: /opt/intel/oneapi/compiler/latest/linux/bin/icx
cxx: /opt/intel/oneapi/compiler/latest/linux/bin/icpx
f77: /opt/intel/oneapi/compiler/latest/linux/bin/ifx
fc: /opt/intel/oneapi/compiler/latest/linux/bin/ifx
spec: oneapi@latest
environment:
set:
MKL_ROOT: "/path/to/mkl/root"
unset: # A list of environment variables to unset
- CC
prepend_path: # Similar for append|remove_path
LD_LIBRARY_PATH: /ld/paths/added/by/setvars/sh
.. note::
Spack is in the process of moving compilers from a separate
attribute to be handled like all other packages. As part of this
process, the ``compilers.yaml`` section will eventually be replaced
by configuration in the ``packages.yaml`` section. This new
configuration is now available, although it is not yet the default
behavior.
Compilers can also be configured as external packages in the
``packages.yaml`` config file. Any external package for a compiler
(e.g. ``gcc`` or ``llvm``) will be treated as a configured compiler
assuming the paths to the compiler executables are determinable from
the prefix.
If the paths to the compiler executable are not determinable from the
prefix, you can add them to the ``extra_attributes`` field. Similarly,
all other fields from the compilers config can be added to the
``extra_attributes`` field for an external representing a compiler.
Note that the format for the ``paths`` field in the
``extra_attributes`` section is different than in the ``compilers``
config. For compilers configured as external packages, the section is
named ``compilers`` and the dictionary maps language names (``c``,
``cxx``, ``fortran``) to paths, rather than using the names ``cc``,
``fc``, and ``f77``.
.. code-block:: yaml
packages:
intel-oneapi-compilers:
externals:
- spec: intel-oneapi-compilers@2025.1.0
prefix: /opt/intel/oneapi
gcc:
external:
- spec: gcc@12.2.0 arch=linux-rhel8-skylake
prefix: /usr
extra_attributes:
compilers:
c: /opt/intel/oneapi/compiler/2025.1/bin/icx
cxx: /opt/intel/oneapi/compiler/2025.1/bin/icpx
fortran: /opt/intel/oneapi/compiler/2025.1/bin/ifx
environment:
set:
MKL_ROOT: "/path/to/mkl/root"
unset: # A list of environment variables to unset
- CC
prepend_path: # Similar for append|remove_path
LD_LIBRARY_PATH: /ld/paths/added/by/setvars/sh
GCC_ROOT: /usr
external:
- spec: llvm+clang@15.0.0 arch=linux-rhel8-skylake
prefix: /usr
extra_attributes:
compilers:
c: /usr/bin/clang-with-suffix
cxx: /usr/bin/clang++-with-extra-info
fortran: /usr/bin/gfortran
extra_rpaths:
- /usr/lib/llvm/
^^^^^^^^^^^^^^^^^^^^^^^
Build Your Own Compiler
^^^^^^^^^^^^^^^^^^^^^^^
If you are particular about which compiler/version you use, you might wish to have Spack build it for you.
For example:
If you are particular about which compiler/version you use, you might
wish to have Spack build it for you. For example:
.. code-block:: console
$ spack install gcc@14+binutils
$ spack install gcc@4.9.3
Once the compiler is installed, you can start using it without additional configuration:
Once that has finished, you will need to add it to your
``compilers.yaml`` file. You can then set Spack to use it by default
by adding the following to your ``packages.yaml`` file:
.. code-block:: console
.. code-block:: yaml
$ spack install hdf5~mpi %gcc@14
The same holds true for compilers that are made available from buildcaches, when reusing them is allowed.
packages:
all:
compiler: [gcc@4.9.3]
.. _compilers-requiring-modules:
@@ -476,26 +536,30 @@ The same holds true for compilers that are made available from buildcaches, when
Compilers Requiring Modules
^^^^^^^^^^^^^^^^^^^^^^^^^^^
Many installed compilers will work regardless of the environment they are called with.
However, some installed compilers require environment variables to be set in order to run;
this is typical for Intel and other proprietary compilers.
Many installed compilers will work regardless of the environment they
are called with. However, some installed compilers require
``$LD_LIBRARY_PATH`` or other environment variables to be set in order
to run; this is typical for Intel and other proprietary compilers.
On typical HPC clusters, these environment modifications are usually delegated to some "module" system.
In such a case, you should tell Spack which module(s) to load in order to run the chosen compiler:
In such a case, you should tell Spack which module(s) to load in order
to run the chosen compiler (If the compiler does not come with a
module file, you might consider making one by hand). Spack will load
this module into the environment ONLY when the compiler is run, and
NOT in general for a package's ``install()`` method. See, for
example, this ``compilers.yaml`` file:
.. code-block:: yaml
packages:
gcc:
externals:
- spec: gcc@10.5.0 languages='c,c++,fortran'
prefix: /opt/compilers
extra_attributes:
compilers:
c: /opt/compilers/bin/gcc-10
cxx: /opt/compilers/bin/g++-10
fortran: /opt/compilers/bin/gfortran-10
modules: [gcc/10.5.0]
compilers:
- compiler:
modules: [other/comp/gcc-5.3-sp3]
operating_system: SuSE11
paths:
cc: /usr/local/other/SLES11.3/gcc/5.3.0/bin/gcc
cxx: /usr/local/other/SLES11.3/gcc/5.3.0/bin/g++
f77: /usr/local/other/SLES11.3/gcc/5.3.0/bin/gfortran
fc: /usr/local/other/SLES11.3/gcc/5.3.0/bin/gfortran
spec: gcc@5.3.0
Some compilers require special environment settings to be loaded not just
to run, but also to execute the code they build, breaking packages that
@@ -516,7 +580,7 @@ Licensed Compilers
^^^^^^^^^^^^^^^^^^
Some proprietary compilers require licensing to use. If you need to
use a licensed compiler, the process is similar to a mix of
use a licensed compiler (eg, PGI), the process is similar to a mix of
build your own, plus modules:
#. Create a Spack package (if it doesn't exist already) to install
@@ -526,21 +590,24 @@ build your own, plus modules:
using Spack to load the module it just created, and running simple
builds (eg: ``cc helloWorld.c && ./a.out``)
#. Add the newly-installed compiler to ``packages.yaml`` as shown above.
#. Add the newly-installed compiler to ``compilers.yaml`` as shown
above.
.. _mixed-toolchains:
^^^^^^^^^^^^^^^^^^^^^^^^^^
Fortran compilers on macOS
^^^^^^^^^^^^^^^^^^^^^^^^^^
^^^^^^^^^^^^^^^^
Mixed Toolchains
^^^^^^^^^^^^^^^^
Modern compilers typically come with related compilers for C, C++ and
Fortran bundled together. When possible, results are best if the same
compiler is used for all languages.
In some cases, this is not possible. For example, XCode on macOS provides no Fortran compilers.
The user is therefore forced to use a mixed toolchain: XCode-provided Clang for C/C++ and e.g.
GNU ``gfortran`` for Fortran.
In some cases, this is not possible. For example, starting with macOS El
Capitan (10.11), many packages no longer build with GCC, but XCode
provides no Fortran compilers. The user is therefore forced to use a
mixed toolchain: XCode-provided Clang for C/C++ and GNU ``gfortran`` for
Fortran.
#. You need to make sure that Xcode is installed. Run the following command:
@@ -593,25 +660,45 @@ GNU ``gfortran`` for Fortran.
Note: the flag is ``-license``, not ``--license``.
#. Run ``spack compiler find`` to locate Clang.
#. There are different ways to get ``gfortran`` on macOS. For example, you can
install GCC with Spack (``spack install gcc``), with Homebrew (``brew install
gcc``), or from a `DMG installer
<https://github.com/fxcoudert/gfortran-for-macOS/releases>`_.
#. Run ``spack compiler find`` to locate both Apple-Clang and GCC.
#. The only thing left to do is to edit ``~/.spack/darwin/compilers.yaml`` to provide
the path to ``gfortran``:
Since languages in Spack are modeled as virtual packages, ``apple-clang`` will be used to provide
C and C++, while GCC will be used for Fortran.
.. code-block:: yaml
compilers:
- compiler:
# ...
paths:
cc: /usr/bin/clang
cxx: /usr/bin/clang++
f77: /path/to/bin/gfortran
fc: /path/to/bin/gfortran
spec: apple-clang@11.0.0
If you used Spack to install GCC, you can get the installation prefix by
``spack location -i gcc`` (this will only work if you have a single version
of GCC installed). Whereas for Homebrew, GCC is installed in
``/usr/local/Cellar/gcc/x.y.z``. With the DMG installer, the correct path
will be ``/usr/local/gfortran``.
^^^^^^^^^^^^^^^^^^^^^
Compiler Verification
^^^^^^^^^^^^^^^^^^^^^
You can verify that your compilers are configured properly by installing a simple package. For example:
You can verify that your compilers are configured properly by installing a
simple package. For example:
.. code-block:: console
$ spack install zlib-ng%gcc@5.3.0
$ spack install zlib%gcc@5.3.0
.. _vendor-specific-compiler-configuration:
@@ -620,7 +707,9 @@ You can verify that your compilers are configured properly by installing a simpl
Vendor-Specific Compiler Configuration
--------------------------------------
This section provides details on how to get vendor-specific compilers working.
With Spack, things usually "just work" with GCC. Not so for other
compilers. This section provides details on how to get specific
compilers working.
^^^^^^^^^^^^^^^
Intel Compilers
@@ -642,8 +731,8 @@ compilers:
you have installed from the ``PATH`` environment variable.
If you want use a version of ``gcc`` or ``g++`` other than the default
version on your system, you need to use either the ``--gcc-install-dir``
or ``--gcc-toolchain`` compiler option to specify the path to the version of
version on your system, you need to use either the ``-gcc-name``
or ``-gxx-name`` compiler option to specify the path to the version of
``gcc`` or ``g++`` that you want to use."
-- `Intel Reference Guide <https://software.intel.com/en-us/node/522750>`_
@@ -651,12 +740,76 @@ compilers:
Intel compilers may therefore be configured in one of two ways with
Spack: using modules, or using compiler flags.
""""""""""""""""""""""""""
Configuration with Modules
""""""""""""""""""""""""""
One can control which GCC is seen by the Intel compiler with modules.
A module must be loaded both for the Intel Compiler (so it will run)
and GCC (so the compiler can find the intended GCC). The following
configuration in ``compilers.yaml`` illustrates this technique:
.. code-block:: yaml
compilers:
- compiler:
modules: [gcc-4.9.3, intel-15.0.24]
operating_system: centos7
paths:
cc: /opt/intel-15.0.24/bin/icc-15.0.24-beta
cxx: /opt/intel-15.0.24/bin/icpc-15.0.24-beta
f77: /opt/intel-15.0.24/bin/ifort-15.0.24-beta
fc: /opt/intel-15.0.24/bin/ifort-15.0.24-beta
spec: intel@15.0.24.4.9.3
.. note::
The version number on the Intel compiler is a combination of
the "native" Intel version number and the GNU compiler it is
targeting.
""""""""""""""""""""""""""
Command Line Configuration
""""""""""""""""""""""""""
One can also control which GCC is seen by the Intel compiler by adding
flags to the ``icc`` command:
#. Identify the location of the compiler you just installed:
.. code-block:: console
$ spack location --install-dir gcc
~/spack/opt/spack/linux-centos7-x86_64/gcc-4.9.3-iy4rw...
#. Set up ``compilers.yaml``, for example:
.. code-block:: yaml
compilers:
- compiler:
modules: [intel-15.0.24]
operating_system: centos7
paths:
cc: /opt/intel-15.0.24/bin/icc-15.0.24-beta
cxx: /opt/intel-15.0.24/bin/icpc-15.0.24-beta
f77: /opt/intel-15.0.24/bin/ifort-15.0.24-beta
fc: /opt/intel-15.0.24/bin/ifort-15.0.24-beta
flags:
cflags: -gcc-name ~/spack/opt/spack/linux-centos7-x86_64/gcc-4.9.3-iy4rw.../bin/gcc
cxxflags: -gxx-name ~/spack/opt/spack/linux-centos7-x86_64/gcc-4.9.3-iy4rw.../bin/g++
fflags: -gcc-name ~/spack/opt/spack/linux-centos7-x86_64/gcc-4.9.3-iy4rw.../bin/gcc
spec: intel@15.0.24.4.9.3
^^^
NAG
^^^
The Numerical Algorithms Group provides a licensed Fortran compiler.
It is recommended to use GCC for your C/C++ compilers.
The Numerical Algorithms Group provides a licensed Fortran compiler. Like Clang,
this requires you to set up a :ref:`mixed-toolchains`. It is recommended to use
GCC for your C/C++ compilers.
The NAG Fortran compilers are a bit more strict than other compilers, and many
packages will fail to install with error messages like:
@@ -673,40 +826,44 @@ the command line:
$ spack install openmpi fflags="-mismatch"
Or it can be set permanently in your ``packages.yaml``:
Or it can be set permanently in your ``compilers.yaml``:
.. code-block:: yaml
packages:
nag:
externals:
- spec: nag@6.1
prefix: /opt/nag/bin
extra_attributes:
compilers:
fortran: /opt/nag/bin/nagfor
flags:
fflags: -mismatch
- compiler:
modules: []
operating_system: centos6
paths:
cc: /soft/spack/opt/spack/linux-x86_64/gcc-5.3.0/gcc-6.1.0-q2zosj3igepi3pjnqt74bwazmptr5gpj/bin/gcc
cxx: /soft/spack/opt/spack/linux-x86_64/gcc-5.3.0/gcc-6.1.0-q2zosj3igepi3pjnqt74bwazmptr5gpj/bin/g++
f77: /soft/spack/opt/spack/linux-x86_64/gcc-4.4.7/nag-6.1-jt3h5hwt5myezgqguhfsan52zcskqene/bin/nagfor
fc: /soft/spack/opt/spack/linux-x86_64/gcc-4.4.7/nag-6.1-jt3h5hwt5myezgqguhfsan52zcskqene/bin/nagfor
flags:
fflags: -mismatch
spec: nag@6.1
---------------
System Packages
---------------
Once compilers are configured, one needs to determine which pre-installed system packages,
if any, to use in builds. These are also configured in the ``~/.spack/packages.yaml`` file.
For example, to use an OpenMPI installed in /opt/local, one would use:
Once compilers are configured, one needs to determine which
pre-installed system packages, if any, to use in builds. This is
configured in the file ``~/.spack/packages.yaml``. For example, to use
an OpenMPI installed in /opt/local, one would use:
.. code-block:: yaml
packages:
openmpi:
buildable: False
externals:
- spec: openmpi@1.10.1
prefix: /opt/local
packages:
openmpi:
externals:
- spec: openmpi@1.10.1
prefix: /opt/local
buildable: False
In general, *Spack is easier to use and more reliable if it builds all of its own dependencies*.
However, there are several packages for which one commonly needs to use system versions:
In general, Spack is easier to use and more reliable if it builds all of
its own dependencies. However, there are several packages for which one
commonly needs to use system versions:
^^^
MPI
@@ -719,7 +876,8 @@ you are unlikely to get a working MPI from Spack. Instead, use an
appropriate pre-installed MPI.
If you choose a pre-installed MPI, you should consider using the
pre-installed compiler used to build that MPI.
pre-installed compiler used to build that MPI; see above on
``compilers.yaml``.
^^^^^^^
OpenSSL
@@ -1283,9 +1441,9 @@ To configure Spack, first run the following command inside the Spack console:
spack compiler find
This creates a ``.staging`` directory in our Spack prefix, along with a ``windows`` subdirectory
containing a ``packages.yaml`` file. On a fresh Windows install with the above packages
containing a ``compilers.yaml`` file. On a fresh Windows install with the above packages
installed, this command should only detect Microsoft Visual Studio and the Intel Fortran
compiler will be integrated within the first version of MSVC present in the ``packages.yaml``
compiler will be integrated within the first version of MSVC present in the ``compilers.yaml``
output.
Spack provides a default ``config.yaml`` file for Windows that it will use unless overridden.

View File

@@ -23,6 +23,7 @@ components for use by dependent packages:
packages:
all:
compiler: [rocmcc@=5.3.0]
variants: amdgpu_target=gfx90a
hip:
buildable: false
@@ -69,15 +70,16 @@ This is in combination with the following compiler definition:
.. code-block:: yaml
packages:
llvm-amdgpu:
externals:
- spec: llvm-amdgpu@=5.3.0
prefix: /opt/rocm-5.3.0
compilers:
c: /opt/rocm-5.3.0/bin/amdclang
cxx: /opt/rocm-5.3.0/bin/amdclang++
fortran: null
compilers:
- compiler:
spec: rocmcc@=5.3.0
paths:
cc: /opt/rocm-5.3.0/bin/amdclang
cxx: /opt/rocm-5.3.0/bin/amdclang++
f77: null
fc: /opt/rocm-5.3.0/bin/amdflang
operating_system: rhel8
target: x86_64
This includes the following considerations:

View File

@@ -1,65 +0,0 @@
.. Copyright Spack Project Developers. See COPYRIGHT file for details.
SPDX-License-Identifier: (Apache-2.0 OR MIT)
.. _include-yaml:
===============================
Include Settings (include.yaml)
===============================
Spack allows you to include configuration files through ``include.yaml``.
Using the ``include:`` heading results in pulling in external configuration
information to be used by any Spack command.
Included configuration files are required *unless* they are explicitly optional
or the entry's condition evaluates to ``false``. Optional includes are specified
with the ``optional`` clause and conditional with the ``when`` clause. For
example,
.. code-block:: yaml
include:
- /path/to/a/required/config.yaml
- path: /path/to/$os/$target/config
optional: true
- path: /path/to/os-specific/config-dir
when: os == "ventura"
shows all three. The first entry, ``/path/to/a/required/config.yaml``,
indicates that included ``config.yaml`` file is required (so must exist).
Use of ``optional: true`` for ``/path/to/$os/$target/config`` means
the path is only included if it exists. The condition ``os == "ventura"``
in the ``when`` clause for ``/path/to/os-specific/config-dir`` means the
path is only included when the operating system (``os``) is ``ventura``.
The same conditions and variables in `Spec List References
<https://spack.readthedocs.io/en/latest/environments.html#spec-list-references>`_
can be used for conditional activation in the ``when`` clauses.
Included files can be specified by path or by their parent directory.
Paths may be absolute, relative (to the configuration file including the path),
or specified as URLs. Only the ``file``, ``ftp``, ``http`` and ``https`` protocols (or
schemes) are supported. Spack-specific, environment and user path variables
can be used. (See :ref:`config-file-variables` for more information.)
A ``sha256`` is required for remote file URLs and must be specified as follows:
.. code-block:: yaml
include:
- path: https://github.com/path/to/raw/config/compilers.yaml
sha256: 26e871804a92cd07bb3d611b31b4156ae93d35b6a6d6e0ef3a67871fcb1d258b
Additionally, remote file URLs must link to the **raw** form of the file's
contents (e.g., `GitHub
<https://docs.github.com/en/repositories/working-with-files/using-files/viewing-and-understanding-files#viewing-or-copying-the-raw-file-content>`_
or `GitLab
<https://docs.gitlab.com/ee/api/repository_files.html#get-raw-file-from-repository>`_).
.. warning::
Recursive includes are not currently processed in a breadth-first manner
so the value of a configuration option that is altered by multiple included
files may not be what you expect. This will be addressed in a future
update.

View File

@@ -71,11 +71,9 @@ or refer to the full manual below.
configuration
config_yaml
include_yaml
packages_yaml
build_settings
environments
env_vars_yaml
containers
mirrors
module_file_support

View File

@@ -128,7 +128,7 @@ depend on the spec:
.. code-block:: python
def setup_run_environment(self, env: EnvironmentModifications) -> None:
def setup_run_environment(self, env):
if self.spec.satisfies("+foo"):
env.set("FOO", "bar")
@@ -142,7 +142,7 @@ For example, a simplified version of the ``python`` package could look like this
.. code-block:: python
def setup_dependent_run_environment(self, env: EnvironmentModifications, dependent_spec: Spec) -> None:
def setup_dependent_run_environment(self, env, dependent_spec):
if dependent_spec.package.extends(self.spec):
env.prepend_path("PYTHONPATH", dependent_spec.prefix.lib.python)
@@ -456,13 +456,14 @@ For instance, the following config options,
tcl:
all:
suffixes:
^python@3: 'python{^python.version.up_to_2}'
^python@3: 'python{^python.version}'
^openblas: 'openblas'
will add a ``python3.12`` to module names of packages compiled with Python 3.12, and similarly for
all specs depending on ``python@3``. This is useful to know which version of Python a set of Python
extensions is associated with. Likewise, the ``openblas`` string is attached to any program that
has openblas in the spec, most likely via the ``+blas`` variant specification.
will add a ``python-3.12.1`` version string to any packages compiled with
Python matching the spec, ``python@3``. This is useful to know which
version of Python a set of Python extensions is associated with. Likewise, the
``openblas`` string is attached to any program that has openblas in the spec,
most likely via the ``+blas`` variant specification.
The most heavyweight solution to module naming is to change the entire
naming convention for module files. This uses the projections format

View File

@@ -486,8 +486,6 @@ present. For instance with a configuration like:
you will use ``mvapich2~cuda %gcc`` as an ``mpi`` provider.
.. _package-strong-preferences:
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
Conflicts and strong preferences
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
@@ -557,13 +555,14 @@ preferences.
FAQ: :ref:`Why does Spack pick particular versions and variants? <faq-concretizer-precedence>`
The ``target`` and ``providers`` preferences
Most package preferences (``compilers``, ``target`` and ``providers``)
can only be set globally under the ``all`` section of ``packages.yaml``:
.. code-block:: yaml
packages:
all:
compiler: [gcc@12.2.0, clang@12:, oneapi@2023:]
target: [x86_64_v3]
providers:
mpi: [mvapich2, mpich, openmpi]

View File

@@ -369,9 +369,9 @@ If you have a collection of software expected to work well together with
no source code of its own, you can create a :ref:`BundlePackage <bundlepackage>`.
Examples where bundle packages can be useful include defining suites of
applications (e.g, `EcpProxyApps
<https://github.com/spack/spack/blob/develop/var/spack/repos/spack_repo/builtin/packages/ecp_proxy_apps/package.py>`_), commonly used libraries
(e.g., `AmdAocl <https://github.com/spack/spack/blob/develop/var/spack/repos/spack_repo/builtin/packages/amd_aocl/package.py>`_),
and software development kits (e.g., `EcpDataVisSdk <https://github.com/spack/spack/blob/develop/var/spack/repos/spack_repo/builtin/packages/ecp_data_vis_sdk/package.py>`_).
<https://github.com/spack/spack/blob/develop/var/spack/repos/builtin/packages/ecp-proxy-apps/package.py>`_), commonly used libraries
(e.g., `AmdAocl <https://github.com/spack/spack/blob/develop/var/spack/repos/builtin/packages/amd-aocl/package.py>`_),
and software development kits (e.g., `EcpDataVisSdk <https://github.com/spack/spack/blob/develop/var/spack/repos/builtin/packages/ecp-data-vis-sdk/package.py>`_).
These versioned packages primarily consist of dependencies on the associated
software packages. They can include :ref:`variants <variants>` to ensure
@@ -443,7 +443,7 @@ lives in:
.. code-block:: console
$ spack location -p gmp
${SPACK_ROOT}/var/spack/repos/spack_repo/builtin/packages/gmp/package.py
${SPACK_ROOT}/var/spack/repos/builtin/packages/gmp/package.py
but ``spack edit`` provides a much simpler shortcut and saves you the
trouble of typing the full path.
@@ -457,19 +457,19 @@ live in Spack's directory structure. In general, :ref:`cmd-spack-create`
handles creating package files for you, so you can skip most of the
details here.
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
``var/spack/repos/spack_repo/builtin/packages``
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
``var/spack/repos/builtin/packages``
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
A Spack installation directory is structured like a standard UNIX
install prefix (``bin``, ``lib``, ``include``, ``var``, ``opt``,
etc.). Most of the code for Spack lives in ``$SPACK_ROOT/lib/spack``.
Packages themselves live in ``$SPACK_ROOT/var/spack/repos/spack_repo/builtin/packages``.
Packages themselves live in ``$SPACK_ROOT/var/spack/repos/builtin/packages``.
If you ``cd`` to that directory, you will see directories for each
package:
.. command-output:: cd $SPACK_ROOT/var/spack/repos/spack_repo/builtin/packages && ls
.. command-output:: cd $SPACK_ROOT/var/spack/repos/builtin/packages && ls
:shell:
:ellipsis: 10
@@ -479,7 +479,7 @@ package lives in:
.. code-block:: none
$SPACK_ROOT/var/spack/repos/spack_repo/builtin/packages/libelf/package.py
$SPACK_ROOT/var/spack/repos/builtin/packages/libelf/package.py
Alongside the ``package.py`` file, a package may contain extra
directories or files (like patches) that it needs to build.
@@ -492,7 +492,7 @@ Packages are named after the directory containing ``package.py``. So,
``libelf``'s ``package.py`` lives in a directory called ``libelf``.
The ``package.py`` file defines a class called ``Libelf``, which
extends Spack's ``Package`` class. For example, here is
``$SPACK_ROOT/var/spack/repos/spack_repo/builtin/packages/libelf/package.py``:
``$SPACK_ROOT/var/spack/repos/builtin/packages/libelf/package.py``:
.. code-block:: python
:linenos:
@@ -520,7 +520,7 @@ these:
$ spack install libelf@0.8.13
Spack sees the package name in the spec and looks for
``libelf/package.py`` in ``var/spack/repos/spack_repo/builtin/packages``.
``libelf/package.py`` in ``var/spack/repos/builtin/packages``.
Likewise, if you run ``spack install py-numpy``, Spack looks for
``py-numpy/package.py``.
@@ -686,7 +686,7 @@ https://www.open-mpi.org/software/ompi/v2.1/downloads/openmpi-2.1.1.tar.bz2
In order to handle this, you can define a ``url_for_version()`` function
like so:
.. literalinclude:: _spack_root/var/spack/repos/spack_repo/builtin/packages/openmpi/package.py
.. literalinclude:: _spack_root/var/spack/repos/builtin/packages/openmpi/package.py
:pyobject: Openmpi.url_for_version
With the use of this ``url_for_version()``, Spack knows to download OpenMPI ``2.1.1``
@@ -787,7 +787,7 @@ of GNU. For that, Spack goes a step further and defines a mixin class that
takes care of all of the plumbing and requires packagers to just define a proper
``gnu_mirror_path`` attribute:
.. literalinclude:: _spack_root/var/spack/repos/spack_repo/builtin/packages/autoconf/package.py
.. literalinclude:: _spack_root/var/spack/repos/builtin/packages/autoconf/package.py
:lines: 9-18
^^^^^^^^^^^^^^^^^^^^^^^^
@@ -1995,7 +1995,7 @@ structure like this:
.. code-block:: none
$SPACK_ROOT/var/spack/repos/spack_repo/builtin/packages/
$SPACK_ROOT/var/spack/repos/builtin/packages/
mvapich2/
package.py
ad_lustre_rwcontig_open_source.patch
@@ -2133,7 +2133,7 @@ handles ``RPATH``:
.. _pyside-patch:
.. literalinclude:: _spack_root/var/spack/repos/spack_repo/builtin/packages/py_pyside/package.py
.. literalinclude:: _spack_root/var/spack/repos/builtin/packages/py-pyside/package.py
:pyobject: PyPyside.patch
:linenos:
@@ -2201,7 +2201,7 @@ using the ``spack resource show`` command::
$ spack resource show 3877ab54
3877ab548f88597ab2327a2230ee048d2d07ace1062efe81fc92e91b7f39cd00
path: /home/spackuser/src/spack/var/spack/repos/spack_repo/builtin/packages/m4/gnulib-pgi.patch
path: /home/spackuser/src/spack/var/spack/repos/builtin/packages/m4/gnulib-pgi.patch
applies to: builtin.m4
``spack resource show`` looks up downloadable resources from package
@@ -2219,7 +2219,7 @@ wonder where the extra boost patches are coming from::
^boost@1.68.0%apple-clang@9.0.0+atomic+chrono~clanglibcpp cxxstd=default +date_time~debug+exception+filesystem+graph~icu+iostreams+locale+log+math~mpi+multithreaded~numpy patches=2ab6c72d03dec6a4ae20220a9dfd5c8c572c5294252155b85c6874d97c323199,b37164268f34f7133cbc9a4066ae98fda08adf51e1172223f6a969909216870f ~pic+program_options~python+random+regex+serialization+shared+signals~singlethreaded+system~taggedlayout+test+thread+timer~versionedlayout+wave arch=darwin-highsierra-x86_64
$ spack resource show b37164268
b37164268f34f7133cbc9a4066ae98fda08adf51e1172223f6a969909216870f
path: /home/spackuser/src/spack/var/spack/repos/spack_repo/builtin/packages/dealii/boost_1.68.0.patch
path: /home/spackuser/src/spack/var/spack/repos/builtin/packages/dealii/boost_1.68.0.patch
applies to: builtin.boost
patched by: builtin.dealii
@@ -2930,7 +2930,7 @@ this, Spack provides four different methods that can be overridden in a package:
The Qt package, for instance, uses this call:
.. literalinclude:: _spack_root/var/spack/repos/spack_repo/builtin/packages/qt/package.py
.. literalinclude:: _spack_root/var/spack/repos/builtin/packages/qt/package.py
:pyobject: Qt.setup_dependent_build_environment
:linenos:
@@ -2958,7 +2958,7 @@ variables to be used by the dependent. This is done by implementing
:meth:`setup_dependent_package <spack.package_base.PackageBase.setup_dependent_package>`. An
example of this can be found in the ``Python`` package:
.. literalinclude:: _spack_root/var/spack/repos/spack_repo/builtin/packages/python/package.py
.. literalinclude:: _spack_root/var/spack/repos/builtin/packages/python/package.py
:pyobject: Python.setup_dependent_package
:linenos:
@@ -3785,7 +3785,7 @@ It is usually sufficient for a packager to override a few
build system specific helper methods or attributes to provide, for instance,
configure arguments:
.. literalinclude:: _spack_root/var/spack/repos/spack_repo/builtin/packages/m4/package.py
.. literalinclude:: _spack_root/var/spack/repos/builtin/packages/m4/package.py
:pyobject: M4.configure_args
:linenos:
@@ -4110,7 +4110,7 @@ Shell command functions
Recall the install method from ``libelf``:
.. literalinclude:: _spack_root/var/spack/repos/spack_repo/builtin/packages/libelf/package.py
.. literalinclude:: _spack_root/var/spack/repos/builtin/packages/libelf/package.py
:pyobject: Libelf.install
:linenos:
@@ -4901,7 +4901,7 @@ the one passed to install, only the MPI implementations all set some
additional properties on it to help you out. E.g., in openmpi, you'll
find this:
.. literalinclude:: _spack_root/var/spack/repos/spack_repo/builtin/packages/openmpi/package.py
.. literalinclude:: _spack_root/var/spack/repos/builtin/packages/openmpi/package.py
:pyobject: Openmpi.setup_dependent_package
That code allows the ``openmpi`` package to associate an ``mpicc`` property
@@ -6001,16 +6001,16 @@ with those implemented in the package itself.
* - Parent/Provider Package
- Stand-alone Tests
* - `C
<https://github.com/spack/spack/blob/develop/var/spack/repos/spack_repo/builtin/packages/c>`_
<https://github.com/spack/spack/blob/develop/var/spack/repos/builtin/packages/c>`_
- Compiles ``hello.c`` and runs it
* - `Cxx
<https://github.com/spack/spack/blob/develop/var/spack/repos/spack_repo/builtin/packages/cxx>`_
<https://github.com/spack/spack/blob/develop/var/spack/repos/builtin/packages/cxx>`_
- Compiles and runs several ``hello`` programs
* - `Fortran
<https://github.com/spack/spack/blob/develop/var/spack/repos/spack_repo/builtin/packages/fortran>`_
<https://github.com/spack/spack/blob/develop/var/spack/repos/builtin/packages/fortran>`_
- Compiles and runs ``hello`` programs (``F`` and ``f90``)
* - `Mpi
<https://github.com/spack/spack/blob/develop/var/spack/repos/spack_repo/builtin/packages/mpi>`_
<https://github.com/spack/spack/blob/develop/var/spack/repos/builtin/packages/mpi>`_
- Compiles and runs ``mpi_hello`` (``c``, ``fortran``)
* - :ref:`PythonPackage <pythonpackage>`
- Imports modules listed in the ``self.import_modules`` property with defaults derived from the tarball
@@ -6031,7 +6031,7 @@ maintainers provide additional stand-alone tests customized to the package.
One example of a package that adds its own stand-alone tests to those
"inherited" by the virtual package it provides an implementation for is
the `Openmpi package
<https://github.com/spack/spack/blob/develop/var/spack/repos/spack_repo/builtin/packages/openmpi/package.py>`_.
<https://github.com/spack/spack/blob/develop/var/spack/repos/builtin/packages/openmpi/package.py>`_.
Below are snippets from running and viewing the stand-alone test results
for ``openmpi``:

View File

@@ -820,69 +820,6 @@ presence of a ``SPACK_CDASH_AUTH_TOKEN`` environment variable during the
build group on CDash called "Release Testing" (that group will be created if
it didn't already exist).
.. _ci_artifacts:
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
CI Artifacts Directory Layout
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
When running the CI build using the command ``spack ci rebuild`` a number of directories are created for
storing data generated during the CI job. The default root directory for artifacts is ``job_scratch_root``.
This can be overridden by passing the argument ``--artifacts-root`` to the ``spack ci generate`` command
or by setting the ``SPACK_ARTIFACTS_ROOT`` environment variable in the build job scripts.
The top level directories under the artifact root are ``concrete_environment``, ``logs``, ``reproduction``,
``tests``, and ``user_data``. Spack does not restrict what is written to any of these directories nor does
it require user specified files be written to any specific directory.
------------------------
``concrete_environment``
------------------------
The directory ``concrete_environment`` is used to communicate the ci generate processed ``spack.yaml`` and
the concrete ``spack.lock`` for the CI environment.
--------
``logs``
--------
The directory ``logs`` contains the spack build log, ``spack-build-out.txt``, and the spack build environment
modification file, ``spack-build-mod-env.txt``. Additionally all files specified by the packages ``Builder``
property ``archive_files`` are also copied here (ie. ``CMakeCache.txt`` in ``CMakeBuilder``).
----------------
``reproduction``
----------------
The directory ``reproduction`` is used to store the files needed by the ``spack reproduce-build`` command.
This includes ``repro.json``, copies of all of the files in ``concrete_environment``, the concrete spec
JSON file for the current spec being built, and all of the files written in the artifacts root directory.
The ``repro.json`` file is not versioned and is only designed to work with the version of spack CI was run with.
An example of what a ``repro.json`` may look like is here.
.. code:: json
{
"job_name": "adios2@2.9.2 /feaevuj %gcc@11.4.0 arch=linux-ubuntu20.04-x86_64_v3 E4S ROCm External",
"job_spec_json": "adios2.json",
"ci_project_dir": "/builds/spack/spack"
}
---------
``tests``
---------
The directory ``tests`` is used to store output from running ``spack test <job spec>``. This may or may not have
data in it depending on the package that was built and the availability of tests.
-------------
``user_data``
-------------
The directory ``user_data`` is used to store everything else that shouldn't be copied to the ``reproduction`` direcotory.
Users may use this to store additional logs or metrics or other types of files generated by the build job.
-------------------------------------
Using a custom spack in your pipeline
-------------------------------------

View File

@@ -9,7 +9,7 @@ Package Repositories (repos.yaml)
=================================
Spack comes with thousands of built-in package recipes in
``var/spack/repos/spack_repo/builtin/``. This is a **package repository** -- a
``var/spack/repos/builtin/``. This is a **package repository** -- a
directory that Spack searches when it needs to find a package by name.
You may need to maintain packages for restricted, proprietary or
experimental software separately from the built-in repository. Spack
@@ -69,7 +69,7 @@ The default ``etc/spack/defaults/repos.yaml`` file looks like this:
.. code-block:: yaml
repos:
- $spack/var/spack/repos/spack_repo/builtin
- $spack/var/spack/repos/builtin
The file starts with ``repos:`` and contains a single ordered list of
paths to repositories. Each path is on a separate line starting with
@@ -78,16 +78,16 @@ paths to repositories. Each path is on a separate line starting with
.. code-block:: yaml
repos:
- /opt/repos/spack_repo/local_repo
- $spack/var/spack/repos/spack_repo/builtin
- /opt/local-repo
- $spack/var/spack/repos/builtin
When Spack interprets a spec, e.g., ``mpich`` in ``spack install mpich``,
it searches these repositories in order (first to last) to resolve each
package name. In this example, Spack will look for the following
packages and use the first valid file:
1. ``/opt/repos/spack_repo/local_repo/packages/mpich/package.py``
2. ``$spack/var/spack/repos/spack_repo/builtin/packages/mpich/package.py``
1. ``/opt/local-repo/packages/mpich/package.py``
2. ``$spack/var/spack/repos/builtin/packages/mpich/package.py``
.. note::
@@ -101,15 +101,14 @@ Namespaces
Every repository in Spack has an associated **namespace** defined in its
top-level ``repo.yaml`` file. If you look at
``var/spack/repos/spack_repo/builtin/repo.yaml`` in the built-in repository, you'll
``var/spack/repos/builtin/repo.yaml`` in the built-in repository, you'll
see that its namespace is ``builtin``:
.. code-block:: console
$ cat var/spack/repos/spack_repo/builtin/repo.yaml
$ cat var/spack/repos/builtin/repo.yaml
repo:
namespace: builtin
api: v2.0
Spack records the repository namespace of each installed package. For
example, if you install the ``mpich`` package from the ``builtin`` repo,
@@ -218,15 +217,15 @@ Suppose you have three repositories: the builtin Spack repo
repo containing your own prototype packages (``proto``). Suppose they
contain packages as follows:
+--------------+-----------------------------------------------+-----------------------------+
| Namespace | Path to repo | Packages |
+==============+===============================================+=============================+
| ``proto`` | ``~/my_spack_repos/spack_repo/proto`` | ``mpich`` |
+--------------+-----------------------------------------------+-----------------------------+
| ``llnl`` | ``/usr/local/repos/spack_repo/llnl`` | ``hdf5`` |
+--------------+-----------------------------------------------+-----------------------------+
| ``builtin`` | ``$spack/var/spack/repos/spack_repo/builtin`` | ``mpich``, ``hdf5``, others |
+--------------+-----------------------------------------------+-----------------------------+
+--------------+------------------------------------+-----------------------------+
| Namespace | Path to repo | Packages |
+==============+====================================+=============================+
| ``proto`` | ``~/proto`` | ``mpich`` |
+--------------+------------------------------------+-----------------------------+
| ``llnl`` | ``/usr/local/llnl`` | ``hdf5`` |
+--------------+------------------------------------+-----------------------------+
| ``builtin`` | ``$spack/var/spack/repos/builtin`` | ``mpich``, ``hdf5``, others |
+--------------+------------------------------------+-----------------------------+
Suppose that ``hdf5`` depends on ``mpich``. You can override the
built-in ``hdf5`` by adding the ``llnl`` repo to ``repos.yaml``:
@@ -234,8 +233,8 @@ built-in ``hdf5`` by adding the ``llnl`` repo to ``repos.yaml``:
.. code-block:: yaml
repos:
- /usr/local/repos/spack_repo/llnl
- $spack/var/spack/repos/spack_repo/builtin
- /usr/local/llnl
- $spack/var/spack/repos/builtin
``spack install hdf5`` will install ``llnl.hdf5 ^builtin.mpich``.
@@ -244,9 +243,9 @@ If, instead, ``repos.yaml`` looks like this:
.. code-block:: yaml
repos:
- ~/my_spack_repos/spack_repo/proto
- /usr/local/repos/spack_repo/llnl
- $spack/var/spack/repos/spack_repo/builtin
- ~/proto
- /usr/local/llnl
- $spack/var/spack/repos/builtin
``spack install hdf5`` will install ``llnl.hdf5 ^proto.mpich``.
@@ -327,8 +326,8 @@ files, use ``spack repo list``.
$ spack repo list
==> 2 package repositories.
myrepo v2.0 ~/my_spack_repos/spack_repo/myrepo
builtin v2.0 ~/spack/var/spack/repos/spack_repo/builtin
myrepo ~/myrepo
builtin ~/spack/var/spack/repos/builtin
Each repository is listed with its associated namespace. To get the raw,
merged YAML from all configuration files, use ``spack config get repos``:
@@ -336,9 +335,9 @@ merged YAML from all configuration files, use ``spack config get repos``:
.. code-block:: console
$ spack config get repos
repos:
- ~/my_spack_repos/spack_repo/myrepo
- $spack/var/spack/repos/spack_repo/builtin
repos:srepos:
- ~/myrepo
- $spack/var/spack/repos/builtin
Note that, unlike ``spack repo list``, this does not include the
namespace, which is read from each repo's ``repo.yaml``.
@@ -352,54 +351,66 @@ yourself; you can use the ``spack repo create`` command.
.. code-block:: console
$ spack repo create ~/my_spack_repos myrepo
$ spack repo create myrepo
==> Created repo with namespace 'myrepo'.
==> To register it with spack, run this command:
spack repo add ~/my_spack_repos/spack_repo/myrepo
spack repo add ~/myrepo
$ ls ~/my_spack_repos/spack_repo/myrepo
$ ls myrepo
packages/ repo.yaml
$ cat ~/my_spack_repos/spack_repo/myrepo/repo.yaml
$ cat myrepo/repo.yaml
repo:
namespace: 'myrepo'
api: v2.0
Namespaces can also be nested, which can be useful if you have
multiple package repositories for an organization. Spack will
create the corresponding directory structure for you:
By default, the namespace of a new repo matches its directory's name.
You can supply a custom namespace with a second argument, e.g.:
.. code-block:: console
$ spack repo create ~/my_spack_repos llnl.comp
$ spack repo create myrepo llnl.comp
==> Created repo with namespace 'llnl.comp'.
==> To register it with spack, run this command:
spack repo add ~/my_spack_repos/spack_repo/llnl/comp
spack repo add ~/myrepo
$ cat ~/my_spack_repos/spack_repo/llnl/comp/repo.yaml
$ cat myrepo/repo.yaml
repo:
namespace: 'llnl.comp'
api: v2.0
You can also create repositories with custom structure with the ``-d/--subdirectory``
argument, e.g.:
.. code-block:: console
$ spack repo create -d applications myrepo apps
==> Created repo with namespace 'apps'.
==> To register it with Spack, run this command:
spack repo add ~/myrepo
$ ls myrepo
applications/ repo.yaml
$ cat myrepo/repo.yaml
repo:
namespace: apps
subdirectory: applications
^^^^^^^^^^^^^^^^^^
``spack repo add``
^^^^^^^^^^^^^^^^^^
Once your repository is created, you can register it with Spack with
``spack repo add``. You nee to specify the path to the directory that
contains the ``repo.yaml`` file.
``spack repo add``:
.. code-block:: console
$ spack repo add ~/my_spack_repos/spack_repo/llnl/comp
$ spack repo add ./myrepo
==> Added repo with namespace 'llnl.comp'.
$ spack repo list
==> 2 package repositories.
llnl.comp v2.0 ~/my_spack_repos/spack_repo/llnl/comp
builtin v2.0 ~/spack/var/spack/repos/spack_repo/builtin
llnl.comp ~/myrepo
builtin ~/spack/var/spack/repos/builtin
This simply adds the repo to your ``repos.yaml`` file.
@@ -421,43 +432,46 @@ By namespace:
.. code-block:: console
$ spack repo rm llnl.comp
==> Removed repository ~/my_spack_repos/spack_repo/llnl/comp with namespace 'llnl.comp'.
==> Removed repository ~/myrepo with namespace 'llnl.comp'.
$ spack repo list
==> 1 package repository.
builtin ~/spack/var/spack/repos/spack_repo/builtin
builtin ~/spack/var/spack/repos/builtin
By path:
.. code-block:: console
$ spack repo rm ~/my_spack_repos/spack_repo/llnl/comp
==> Removed repository ~/my_spack_repos/spack_repo/llnl/comp
$ spack repo rm ~/myrepo
==> Removed repository ~/myrepo
$ spack repo list
==> 1 package repository.
builtin ~/spack/var/spack/repos/spack_repo/builtin
builtin ~/spack/var/spack/repos/builtin
--------------------------------
Repo namespaces and Python
--------------------------------
Package repositories are implemented as Python packages. To be precise,
they are `namespace packages
<https://packaging.python.org/en/latest/guides/packaging-namespace-packages/>`_
with ``spack_repo`` the top-level namespace, followed by the repository
namespace as submodules. For example, the builtin repository corresponds
to the Python module ``spack_repo.builtin.packages``.
You may have noticed that namespace notation for repositories is similar
to the notation for namespaces in Python. As it turns out, you *can*
treat Spack repositories like Python packages; this is how they are
implemented.
This structure allows you to extend a ``builtin`` package in your own
You could, for example, extend a ``builtin`` package in your own
repository:
.. code-block:: python
from spack_repo.builtin.packages.mpich.package import Mpich
from spack.pkg.builtin.mpich import Mpich
class MyPackage(Mpich):
...
Spack populates ``sys.path`` at runtime with the path to the root of your
package repository's ``spack_repo`` directory.
Spack repo namespaces are actually Python namespaces tacked on under
``spack.pkg``. The search semantics of ``repos.yaml`` are actually
implemented using Python's built-in `sys.path
<https://docs.python.org/2/library/sys.html#sys.path>`_ search. The
:py:mod:`spack.repo` module implements a custom `Python importer
<https://docs.python.org/2/library/imp.html>`_.

View File

@@ -1,13 +1,13 @@
sphinx==8.2.3
sphinx==8.1.3
sphinxcontrib-programoutput==0.18
sphinx_design==0.6.1
sphinx-rtd-theme==3.0.2
python-levenshtein==0.27.1
python-levenshtein==0.26.1
docutils==0.21.2
pygments==2.19.1
urllib3==2.4.0
pytest==8.3.5
isort==6.0.1
black==25.1.0
flake8==7.2.0
urllib3==2.3.0
pytest==8.3.4
isort==5.13.2
black==24.10.0
flake8==7.1.1
mypy==1.11.1

View File

@@ -176,72 +176,92 @@ community without needing deep familiarity with GnuPG or Public Key
Infrastructure.
.. _build_cache_signing:
.. _build_cache_format:
-------------------
Build Cache Signing
-------------------
------------------
Build Cache Format
------------------
For an in-depth description of the layout of a binary mirror, see
the :ref:`documentation<build_cache_layout>` covering binary caches. The
key takeaway from that discussion that applies here is that the entry point
to a binary package is it's manifest. The manifest refers unambiguously to the
spec metadata and compressed archive, which are stored as content-addressed
blobs.
A binary package consists of a metadata file unambiguously defining the
built package (and including other details such as how to relocate it)
and the installation directory of the package stored as a compressed
archive file. The metadata files can either be unsigned, in which case
the contents are simply the json-serialized concrete spec plus metadata,
or they can be signed, in which case the json-serialized concrete spec
plus metadata is wrapped in a gpg cleartext signature. Built package
metadata files are named to indicate the operating system and
architecture for which the package was built as well as the compiler
used to build it and the packages name and version. For example::
The manifest files can either be signed or unsigned, but are always given
a name ending with ``.spec.manifest.json`` regardless. The difference between
signed and unsigned manifests is simply that the signed version is wrapped in
a gpg cleartext signature, as illustrated below::
linux-ubuntu18.04-haswell-gcc-7.5.0-zlib-1.2.12-llv2ysfdxnppzjrt5ldybb5c52qbmoow.spec.json.sig
would contain the concrete spec and binary metadata for a binary package
of ``zlib@1.2.12``, built for the ``ubuntu`` operating system and ``haswell``
architecture. The id of the built package exists in the name of the file
as well (after the package name and version) and in this case begins
with ``llv2ys``. The id distinguishes a particular built package from all
other built packages with the same os/arch, compiler, name, and version.
Below is an example of a signed binary package metadata file. Such a
file would live in the ``build_cache`` directory of a binary mirror::
-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA512
{
"version": 3,
"data": [
{
"contentLength": 10731083,
"mediaType": "application/vnd.spack.install.v2.tar+gzip",
"compression": "gzip",
"checksumAlgorithm": "sha256",
"checksum": "0f24aa6b5dd7150067349865217acd3f6a383083f9eca111d2d2fed726c88210"
},
{
"contentLength": 1000,
"mediaType": "application/vnd.spack.spec.v5+json",
"compression": "gzip",
"checksumAlgorithm": "sha256",
"checksum": "fba751c4796536737c9acbb718dad7429be1fa485f5585d450ab8b25d12ae041"
}
]
}
-----BEGIN PGP SIGNATURE-----
"spec": {
<concrete-spec-contents-omitted>
},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=RrFX
"buildcache_layout_version": 1,
"binary_cache_checksum": {
"hash_algorithm": "sha256",
"hash": "4f1e46452c35a5e61bcacca205bae1bfcd60a83a399af201a29c95b7cc3e1423"
}
}
-----BEGIN PGP SIGNATURE-----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=3gvm
-----END PGP SIGNATURE-----
If a user has trusted the public key associated with the private key
used to sign the above manifest file, the signature can be verified with
used to sign the above spec file, the signature can be verified with
gpg, as follows::
$ gpg --verify gcc-runtime-12.3.0-s2nqujezsce4x6uhtvxscu7jhewqzztx.spec.manifest.json
$ gpg verify linux-ubuntu18.04-haswell-gcc-7.5.0-zlib-1.2.12-llv2ysfdxnppzjrt5ldybb5c52qbmoow.spec.json.sig
When attempting to install a binary package that has been signed, spack will
attempt to verify the signature with one of the trusted keys in its keyring,
and will fail if unable to do so. While not recommended, it is possible to
force installation of a signed package without verification by providing the
``--no-check-signature`` argument to ``spack install ...``.
The metadata (regardless whether signed or unsigned) contains the checksum
of the ``.spack`` file containing the actual installation. The checksum should
be compared to a checksum computed locally on the ``.spack`` file to ensure the
contents have not changed since the binary spec plus metadata were signed. The
``.spack`` files are actually tarballs containing the compressed archive of the
install tree. These files, along with the metadata files, live within the
``build_cache`` directory of the mirror, and together are organized as follows::
build_cache/
# unsigned metadata (for indexing, contains sha256 of .spack file)
<arch>-<compiler>-<name>-<ver>-24zvipcqgg2wyjpvdq2ajy5jnm564hen.spec.json
# clearsigned metadata (same as above, but signed)
<arch>-<compiler>-<name>-<ver>-24zvipcqgg2wyjpvdq2ajy5jnm564hen.spec.json.sig
<arch>/
<compiler>/
<name>-<ver>/
# tar.gz-compressed prefix (may support more compression formats later)
<arch>-<compiler>-<name>-<ver>-24zvipcqgg2wyjpvdq2ajy5jnm564hen.spack
Uncompressing and extracting the ``.spack`` file results in the install tree.
This is in contrast to previous versions of spack, where the ``.spack`` file
contained a (duplicated) metadata file, a signature file and a nested tarball
containing the install tree.
.. _internal_implementation:
@@ -300,10 +320,10 @@ the following way:
Reputational Public Key are imported into a keyring by the ``spack gpg …``
sub-command. This is initiated by the jobs build script which is created by
the generate job at the beginning of the pipeline.
4. Assuming the package has dependencies those spec manifests are verified using
4. Assuming the package has dependencies those specs are verified using
the keyring.
5. The package is built and the spec manifest is generated
6. The spec manifest is signed by the keyring and uploaded to the mirrors
5. The package is built and the spec.json is generated
6. The spec.json is signed by the keyring and uploaded to the mirrors
build cache.
**Reputational Key**
@@ -356,24 +376,24 @@ following way:
4. In addition to the secret, the runner creates a tmpfs memory mounted
directory where the GnuPG keyring will be created to verify, and
then resign the package specs.
5. The job script syncs all spec manifest files from the build cache to
5. The job script syncs all spec.json.sig files from the build cache to
a working directory in the jobs execution environment.
6. The job script then runs the ``sign.sh`` script built into the
notary Docker image.
7. The ``sign.sh`` script imports the public components of the
Reputational and Intermediate CI Keys and uses them to verify good
signatures on the spec.manifest.json files. If any signed manifest
does not verify, the job immediately fails.
8. Assuming all manifests are verified, the ``sign.sh`` script then unpacks
the manifest json data from the signed file in preparation for being
signatures on the spec.json.sig files. If any signed spec does not
verify the job immediately fails.
8. Assuming all specs are verified, the ``sign.sh`` script then unpacks
the spec json data from the signed file in preparation for being
re-signed with the Reputational Key.
9. The private components of the Reputational Key are decrypted to
standard out using ``aws-encryption-cli`` directly into a ``gpg
import …`` statement which imports the key into the
keyring mounted in-memory.
10. The private key is then used to sign each of the manifests and the
10. The private key is then used to sign each of the json specs and the
keyring is removed from disk.
11. The re-signed manifests are resynced to the AWS S3 Mirror and the
11. The re-signed json specs are resynced to the AWS S3 Mirror and the
public signing of the packages for the develop or release pipeline
that created them is complete.

View File

@@ -11,7 +11,6 @@
* Homepage: https://altgraph.readthedocs.io/en/latest/index.html
* Usage: dependency of macholib
* Version: 0.17.3
* License: MIT
archspec
--------
@@ -19,7 +18,6 @@
* Homepage: https://pypi.python.org/pypi/archspec
* Usage: Labeling, comparison and detection of microarchitectures
* Version: 0.2.5 (commit 38ce485258ffc4fc6dd6688f8dc90cb269478c47)
* License: Apache-2.0 or MIT
astunparse
----------------
@@ -27,7 +25,6 @@
* Homepage: https://github.com/simonpercivall/astunparse
* Usage: Unparsing Python ASTs for package hashes in Spack
* Version: 1.6.3 (plus modifications)
* License: PSF-2.0
* Note: This is in ``spack.util.unparse`` because it's very heavily
modified, and we want to track coverage for it.
Specifically, we have modified this library to generate consistent unparsed ASTs
@@ -44,7 +41,6 @@
* Homepage: https://github.com/python-attrs/attrs
* Usage: Needed by jsonschema.
* Version: 22.1.0
* License: MIT
ctest_log_parser
----------------
@@ -52,7 +48,6 @@
* Homepage: https://github.com/Kitware/CMake/blob/master/Source/CTest/cmCTestBuildHandler.cxx
* Usage: Functions to parse build logs and extract error messages.
* Version: Unversioned
* License: BSD-3-Clause
* Note: This is a homemade port of Kitware's CTest build handler.
distro
@@ -61,7 +56,6 @@
* Homepage: https://pypi.python.org/pypi/distro
* Usage: Provides a more stable linux distribution detection.
* Version: 1.8.0
* License: Apache-2.0
jinja2
------
@@ -69,7 +63,6 @@
* Homepage: https://pypi.python.org/pypi/Jinja2
* Usage: A modern and designer-friendly templating language for Python.
* Version: 3.0.3 (last version supporting Python 3.6)
* License: BSD-3-Clause
jsonschema
----------
@@ -77,7 +70,6 @@
* Homepage: https://pypi.python.org/pypi/jsonschema
* Usage: An implementation of JSON Schema for Python.
* Version: 3.2.0 (last version before 2.7 and 3.6 support was dropped)
* License: MIT
* Note: We don't include tests or benchmarks; just what Spack needs.
macholib
@@ -86,7 +78,6 @@
* Homepage: https://macholib.readthedocs.io/en/latest/index.html#
* Usage: Manipulation of Mach-o binaries for relocating macOS buildcaches on Linux
* Version: 1.16.2
* License: MIT
markupsafe
----------
@@ -94,7 +85,6 @@
* Homepage: https://pypi.python.org/pypi/MarkupSafe
* Usage: Implements a XML/HTML/XHTML Markup safe string for Python.
* Version: 2.0.1 (last version supporting Python 3.6)
* License: BSD-3-Clause
pyrsistent
----------
@@ -102,7 +92,6 @@
* Homepage: http://github.com/tobgu/pyrsistent/
* Usage: Needed by `jsonschema`
* Version: 0.18.0
* License: MIT
ruamel.yaml
------
@@ -112,7 +101,6 @@
actively maintained and has more features, including round-tripping
comments read from config files.
* Version: 0.17.21
* License: MIT
six
---
@@ -120,6 +108,5 @@
* Homepage: https://pypi.python.org/pypi/six
* Usage: Python 2 and 3 compatibility utilities.
* Version: 1.16.0
* License: MIT
"""

View File

@@ -3,7 +3,7 @@
# SPDX-License-Identifier: (Apache-2.0 OR MIT)
"""URL primitives that just require Python standard library."""
import itertools
import os
import os.path
import re
from typing import Optional, Set, Tuple
from urllib.parse import urlsplit, urlunsplit

View File

@@ -7,7 +7,6 @@
import fnmatch
import glob
import hashlib
import io
import itertools
import numbers
import os
@@ -21,7 +20,6 @@
from contextlib import contextmanager
from itertools import accumulate
from typing import (
IO,
Callable,
Deque,
Dict,
@@ -77,6 +75,7 @@
"install_tree",
"is_exe",
"join_path",
"last_modification_time_recursive",
"library_extensions",
"mkdirp",
"partition_path",
@@ -670,7 +669,7 @@ def copy(src, dest, _permissions=False):
_permissions (bool): for internal use only
Raises:
OSError: if *src* does not match any files or directories
IOError: if *src* does not match any files or directories
ValueError: if *src* matches multiple files but *dest* is
not a directory
"""
@@ -681,7 +680,7 @@ def copy(src, dest, _permissions=False):
files = glob.glob(src)
if not files:
raise OSError("No such file or directory: '{0}'".format(src))
raise IOError("No such file or directory: '{0}'".format(src))
if len(files) > 1 and not os.path.isdir(dest):
raise ValueError(
"'{0}' matches multiple files but '{1}' is not a directory".format(src, dest)
@@ -712,7 +711,7 @@ def install(src, dest):
dest (str): the destination file or directory
Raises:
OSError: if *src* does not match any files or directories
IOError: if *src* does not match any files or directories
ValueError: if *src* matches multiple files but *dest* is
not a directory
"""
@@ -750,7 +749,7 @@ def copy_tree(
_permissions (bool): for internal use only
Raises:
OSError: if *src* does not match any files or directories
IOError: if *src* does not match any files or directories
ValueError: if *src* is a parent directory of *dest*
"""
if _permissions:
@@ -764,7 +763,7 @@ def copy_tree(
files = glob.glob(src)
if not files:
raise OSError("No such file or directory: '{0}'".format(src), errno.ENOENT)
raise IOError("No such file or directory: '{0}'".format(src))
# For Windows hard-links and junctions, the source path must exist to make a symlink. Add
# all symlinks to this list while traversing the tree, then when finished, make all
@@ -845,7 +844,7 @@ def install_tree(src, dest, symlinks=True, ignore=None):
ignore (typing.Callable): function indicating which files to ignore
Raises:
OSError: if *src* does not match any files or directories
IOError: if *src* does not match any files or directories
ValueError: if *src* is a parent directory of *dest*
"""
copy_tree(src, dest, symlinks=symlinks, ignore=ignore, _permissions=True)
@@ -1471,36 +1470,15 @@ def set_executable(path):
@system_path_filter
def recursive_mtime_greater_than(path: str, time: float) -> bool:
"""Returns true if any file or dir recursively under `path` has mtime greater than `time`."""
# use bfs order to increase likelihood of early return
queue: Deque[str] = collections.deque([path])
if os.stat(path).st_mtime > time:
return True
while queue:
current = queue.popleft()
try:
entries = os.scandir(current)
except OSError:
continue
with entries:
for entry in entries:
try:
st = entry.stat(follow_symlinks=False)
except OSError:
continue
if st.st_mtime > time:
return True
if entry.is_dir(follow_symlinks=False):
queue.append(entry.path)
return False
def last_modification_time_recursive(path):
path = os.path.abspath(path)
times = [os.stat(path).st_mtime]
times.extend(
os.lstat(os.path.join(root, name)).st_mtime
for root, dirs, files in os.walk(path)
for name in dirs + files
)
return max(times)
@system_path_filter
@@ -1762,7 +1740,8 @@ def find(
def _log_file_access_issue(e: OSError, path: str) -> None:
tty.debug(f"find must skip {path}: {e}")
errno_name = errno.errorcode.get(e.errno, "UNKNOWN")
tty.debug(f"find must skip {path}: {errno_name} {e}")
def _file_id(s: os.stat_result) -> Tuple[int, int]:
@@ -2456,69 +2435,26 @@ class WindowsSimulatedRPath:
and vis versa.
"""
def __init__(
self,
package,
base_modification_prefix: Optional[Union[str, pathlib.Path]] = None,
link_install_prefix: bool = True,
):
def __init__(self, package, link_install_prefix=True):
"""
Args:
package (spack.package_base.PackageBase): Package requiring links
base_modification_prefix (str|pathlib.Path): Path representation indicating
the root directory in which to establish the simulated rpath, ie where the
symlinks that comprise the "rpath" behavior will be installed.
Note: This is a mutually exclusive option with `link_install_prefix` using
both is an error.
Default: None
link_install_prefix (bool): Link against package's own install or stage root.
Packages that run their own executables during build and require rpaths to
the build directory during build time require this option.
Default: install
the build directory during build time require this option. Default: install
root
Note: This is a mutually exclusive option with `base_modification_prefix`, using
both is an error.
"""
self.pkg = package
self._addl_rpaths: set[str] = set()
if link_install_prefix and base_modification_prefix:
raise RuntimeError(
"Invalid combination of arguments given to WindowsSimulated RPath.\n"
"Select either `link_install_prefix` to create an install prefix rpath"
" or specify a `base_modification_prefix` for any other link type. "
"Specifying both arguments is invalid."
)
if not (link_install_prefix or base_modification_prefix):
raise RuntimeError(
"Insufficient arguments given to WindowsSimulatedRpath.\n"
"WindowsSimulatedRPath requires one of link_install_prefix"
" or base_modification_prefix to be specified."
" Neither was provided."
)
self._addl_rpaths = set()
self.link_install_prefix = link_install_prefix
if base_modification_prefix:
self.base_modification_prefix = pathlib.Path(base_modification_prefix)
else:
self.base_modification_prefix = pathlib.Path(self.pkg.prefix)
self._additional_library_dependents: set[pathlib.Path] = set()
if not self.link_install_prefix:
tty.debug(f"Generating rpath for non install context: {base_modification_prefix}")
self._additional_library_dependents = set()
@property
def library_dependents(self):
"""
Set of directories where package binaries/libraries are located.
"""
base_pths = set()
if self.link_install_prefix:
base_pths.add(pathlib.Path(self.pkg.prefix.bin))
base_pths |= self._additional_library_dependents
return base_pths
return set([pathlib.Path(self.pkg.prefix.bin)]) | self._additional_library_dependents
def add_library_dependent(self, *dest):
"""
@@ -2534,12 +2470,6 @@ def add_library_dependent(self, *dest):
new_pth = pathlib.Path(pth).parent
else:
new_pth = pathlib.Path(pth)
path_is_in_prefix = new_pth.is_relative_to(self.base_modification_prefix)
if not path_is_in_prefix:
raise RuntimeError(
f"Attempting to generate rpath symlink out of rpath context:\
{str(self.base_modification_prefix)}"
)
self._additional_library_dependents.add(new_pth)
@property
@@ -2628,33 +2558,6 @@ def establish_link(self):
self._link(library, lib_dir)
def make_package_test_rpath(pkg, test_dir: Union[str, pathlib.Path]):
"""Establishes a temp Windows simulated rpath for the pkg in the testing directory
so an executable can test the libraries/executables with proper access
to dependent dlls
Note: this is a no-op on all other platforms besides Windows
Args:
pkg (spack.package_base.PackageBase): the package for which the rpath should be computed
test_dir: the testing directory in which we should construct an rpath
"""
# link_install_prefix as false ensures we're not linking into the install prefix
mini_rpath = WindowsSimulatedRPath(pkg, link_install_prefix=False)
# add the testing directory as a location to install rpath symlinks
mini_rpath.add_library_dependent(test_dir)
# check for whether build_directory is available, if not
# assume the stage root is the build dir
build_dir_attr = getattr(pkg, "build_directory", None)
build_directory = build_dir_attr if build_dir_attr else pkg.stage.path
# add the build dir & build dir bin
mini_rpath.add_rpath(os.path.join(build_directory, "bin"))
mini_rpath.add_rpath(os.path.join(build_directory))
# construct rpath
mini_rpath.establish_link()
@system_path_filter
@memoized
def can_access_dir(path):
@@ -2883,20 +2786,6 @@ def keep_modification_time(*filenames):
os.utime(f, (os.path.getatime(f), mtime))
@contextmanager
def temporary_file_position(stream):
orig_pos = stream.tell()
yield
stream.seek(orig_pos)
@contextmanager
def current_file_position(stream: IO[str], loc: int, relative_to=io.SEEK_CUR):
with temporary_file_position(stream):
stream.seek(loc, relative_to)
yield
@contextmanager
def temporary_dir(
suffix: Optional[str] = None, prefix: Optional[str] = None, dir: Optional[str] = None

View File

@@ -11,24 +11,10 @@
import re
import sys
import traceback
import types
import typing
import warnings
from datetime import datetime, timedelta
from typing import (
Any,
Callable,
Dict,
Generic,
Iterable,
Iterator,
List,
Mapping,
Optional,
Tuple,
TypeVar,
Union,
)
from typing import Callable, Dict, Iterable, List, Tuple, TypeVar
# Ignore emacs backups when listing modules
ignore_modules = r"^\.#|~$"
@@ -437,39 +423,46 @@ def add_func_to_class(name, func):
return cls
K = TypeVar("K")
V = TypeVar("V")
@lazy_lexicographic_ordering
class HashableMap(typing.MutableMapping[K, V]):
class HashableMap(collections.abc.MutableMapping):
"""This is a hashable, comparable dictionary. Hash is performed on
a tuple of the values in the dictionary."""
__slots__ = ("dict",)
def __init__(self):
self.dict: Dict[K, V] = {}
self.dict = {}
def __getitem__(self, key: K) -> V:
def __getitem__(self, key):
return self.dict[key]
def __setitem__(self, key: K, value: V) -> None:
def __setitem__(self, key, value):
self.dict[key] = value
def __iter__(self) -> Iterator[K]:
def __iter__(self):
return iter(self.dict)
def __len__(self) -> int:
def __len__(self):
return len(self.dict)
def __delitem__(self, key: K) -> None:
def __delitem__(self, key):
del self.dict[key]
def _cmp_iter(self):
for _, v in sorted(self.items()):
yield v
def copy(self):
"""Type-agnostic clone method. Preserves subclass type."""
# Construct a new dict of my type
self_type = type(self)
clone = self_type()
# Copy everything from this dict into it.
for key in self:
clone[key] = self[key].copy()
return clone
def match_predicate(*args):
"""Utility function for making string matching predicates.
@@ -714,24 +707,14 @@ def __init__(self, wrapped_object):
class Singleton:
"""Wrapper for lazily initialized singleton objects."""
"""Simple wrapper for lazily initialized singleton objects."""
def __init__(self, factory: Callable[[], object]):
def __init__(self, factory):
"""Create a new singleton to be inited with the factory function.
Most factories will simply create the object to be initialized and
return it.
In some cases, e.g. when bootstrapping some global state, the singleton
may need to be initialized incrementally. If the factory returns a generator
instead of a regular object, the singleton will assign each result yielded by
the generator to the singleton instance. This allows methods called by
the factory in later stages to refer back to the singleton.
Args:
factory (function): function taking no arguments that creates the
singleton instance.
factory (function): function taking no arguments that
creates the singleton instance.
"""
self.factory = factory
self._instance = None
@@ -739,16 +722,7 @@ def __init__(self, factory: Callable[[], object]):
@property
def instance(self):
if self._instance is None:
instance = self.factory()
if isinstance(instance, types.GeneratorType):
# if it's a generator, assign every value
for value in instance:
self._instance = value
else:
# if not, just assign the result like a normal singleton
self._instance = instance
self._instance = self.factory()
return self._instance
def __getattr__(self, name):
@@ -1053,28 +1027,19 @@ def __exit__(self, exc_type, exc_value, tb):
return True
ClassPropertyType = TypeVar("ClassPropertyType")
class classproperty(Generic[ClassPropertyType]):
class classproperty:
"""Non-data descriptor to evaluate a class-level property. The function that performs
the evaluation is injected at creation time and takes an owner (i.e., the class that
originated the instance).
the evaluation is injected at creation time and take an instance (could be None) and
an owner (i.e. the class that originated the instance)
"""
def __init__(self, callback: Callable[[Any], ClassPropertyType]) -> None:
def __init__(self, callback):
self.callback = callback
def __get__(self, instance, owner) -> ClassPropertyType:
def __get__(self, instance, owner):
return self.callback(owner)
#: A type alias that represents either a classproperty descriptor or a constant value of the same
#: type. This allows derived classes to override a computed class-level property with a constant
#: value while retaining type compatibility.
ClassProperty = Union[ClassPropertyType, classproperty[ClassPropertyType]]
class DeprecatedProperty:
"""Data descriptor to error or warn when a deprecated property is accessed.
@@ -1112,88 +1077,3 @@ def __set__(self, instance, value):
def factory(self, instance, owner):
raise NotImplementedError("must be implemented by derived classes")
KT = TypeVar("KT")
VT = TypeVar("VT")
class PriorityOrderedMapping(Mapping[KT, VT]):
"""Mapping that iterates over key according to an integer priority. If the priority is
the same for two keys, insertion order is what matters.
The priority is set when the key/value pair is added. If not set, the highest current priority
is used.
"""
_data: Dict[KT, VT]
_priorities: List[Tuple[int, KT]]
def __init__(self) -> None:
self._data = {}
# Tuple of (priority, key)
self._priorities = []
def __getitem__(self, key: KT) -> VT:
return self._data[key]
def __len__(self) -> int:
return len(self._data)
def __iter__(self):
yield from (key for _, key in self._priorities)
def __reversed__(self):
yield from (key for _, key in reversed(self._priorities))
def reversed_keys(self):
"""Iterates over keys from the highest priority, to the lowest."""
return reversed(self)
def reversed_values(self):
"""Iterates over values from the highest priority, to the lowest."""
yield from (self._data[key] for _, key in reversed(self._priorities))
def _highest_priority(self) -> int:
if not self._priorities:
return 0
result, _ = self._priorities[-1]
return result
def add(self, key: KT, *, value: VT, priority: Optional[int] = None) -> None:
"""Adds a key/value pair to the mapping, with a specific priority.
If the priority is None, then it is assumed to be the highest priority value currently
in the container.
Raises:
ValueError: when the same priority is already in the mapping
"""
if priority is None:
priority = self._highest_priority()
if key in self._data:
self.remove(key)
self._priorities.append((priority, key))
# We rely on sort being stable
self._priorities.sort(key=lambda x: x[0])
self._data[key] = value
assert len(self._data) == len(self._priorities)
def remove(self, key: KT) -> VT:
"""Removes a key from the mapping.
Returns:
The value associated with the key being removed
Raises:
KeyError: if the key is not in the mapping
"""
if key not in self._data:
raise KeyError(f"cannot find {key}")
popped_item = self._data.pop(key)
self._priorities = [(p, k) for p, k in self._priorities if k != key]
assert len(self._data) == len(self._priorities)
return popped_item

View File

@@ -41,16 +41,6 @@ def __init__(self, dst, src_a=None, src_b=None):
self.src_a = src_a
self.src_b = src_b
def __repr__(self) -> str:
return f"MergeConflict(dst={self.dst!r}, src_a={self.src_a!r}, src_b={self.src_b!r})"
def _samefile(a: str, b: str):
try:
return os.path.samefile(a, b)
except OSError:
return False
class SourceMergeVisitor(BaseDirectoryVisitor):
"""
@@ -60,14 +50,9 @@ class SourceMergeVisitor(BaseDirectoryVisitor):
- A list of merge conflicts in dst/
"""
def __init__(
self, ignore: Optional[Callable[[str], bool]] = None, normalize_paths: bool = False
):
def __init__(self, ignore: Optional[Callable[[str], bool]] = None):
self.ignore = ignore if ignore is not None else lambda f: False
# On case-insensitive filesystems, normalize paths to detect duplications
self.normalize_paths = normalize_paths
# When mapping <src root> to <dst root>/<projection>, we need to prepend the <projection>
# bit to the relative path in the destination dir.
self.projection: str = ""
@@ -86,88 +71,10 @@ def __init__(
# and can run mkdir in order.
self.directories: Dict[str, Tuple[str, str]] = {}
# If the visitor is configured to normalize paths, keep a map of
# normalized path to: original path, root directory + relative path
self._directories_normalized: Dict[str, Tuple[str, str, str]] = {}
# Files to link. Maps dst_rel to (src_root, src_rel). This is an ordered dict, where files
# are guaranteed to be grouped by src_root in the order they were visited.
self.files: Dict[str, Tuple[str, str]] = {}
# If the visitor is configured to normalize paths, keep a map of
# normalized path to: original path, root directory + relative path
self._files_normalized: Dict[str, Tuple[str, str, str]] = {}
def _in_directories(self, proj_rel_path: str) -> bool:
"""
Check if a path is already in the directory list
"""
if self.normalize_paths:
return proj_rel_path.lower() in self._directories_normalized
else:
return proj_rel_path in self.directories
def _directory(self, proj_rel_path: str) -> Tuple[str, str, str]:
"""
Get the directory that is mapped to a path
"""
if self.normalize_paths:
return self._directories_normalized[proj_rel_path.lower()]
else:
return (proj_rel_path, *self.directories[proj_rel_path])
def _del_directory(self, proj_rel_path: str):
"""
Remove a directory from the list of directories
"""
del self.directories[proj_rel_path]
if self.normalize_paths:
del self._directories_normalized[proj_rel_path.lower()]
def _add_directory(self, proj_rel_path: str, root: str, rel_path: str):
"""
Add a directory to the list of directories.
Also stores the normalized version for later lookups
"""
self.directories[proj_rel_path] = (root, rel_path)
if self.normalize_paths:
self._directories_normalized[proj_rel_path.lower()] = (proj_rel_path, root, rel_path)
def _in_files(self, proj_rel_path: str) -> bool:
"""
Check if a path is already in the files list
"""
if self.normalize_paths:
return proj_rel_path.lower() in self._files_normalized
else:
return proj_rel_path in self.files
def _file(self, proj_rel_path: str) -> Tuple[str, str, str]:
"""
Get the file that is mapped to a path
"""
if self.normalize_paths:
return self._files_normalized[proj_rel_path.lower()]
else:
return (proj_rel_path, *self.files[proj_rel_path])
def _del_file(self, proj_rel_path: str):
"""
Remove a file from the list of files
"""
del self.files[proj_rel_path]
if self.normalize_paths:
del self._files_normalized[proj_rel_path.lower()]
def _add_file(self, proj_rel_path: str, root: str, rel_path: str):
"""
Add a file to the list of files
Also stores the normalized version for later lookups
"""
self.files[proj_rel_path] = (root, rel_path)
if self.normalize_paths:
self._files_normalized[proj_rel_path.lower()] = (proj_rel_path, root, rel_path)
def before_visit_dir(self, root: str, rel_path: str, depth: int) -> bool:
"""
Register a directory if dst / rel_path is not blocked by a file or ignored.
@@ -177,28 +84,23 @@ def before_visit_dir(self, root: str, rel_path: str, depth: int) -> bool:
if self.ignore(rel_path):
# Don't recurse when dir is ignored.
return False
elif self._in_files(proj_rel_path):
# A file-dir conflict is fatal except if they're the same file (symlinked dir).
src_a = os.path.join(*self._file(proj_rel_path))
src_b = os.path.join(root, rel_path)
if not _samefile(src_a, src_b):
self.fatal_conflicts.append(
MergeConflict(dst=proj_rel_path, src_a=src_a, src_b=src_b)
elif proj_rel_path in self.files:
# Can't create a dir where a file is.
src_a_root, src_a_relpath = self.files[proj_rel_path]
self.fatal_conflicts.append(
MergeConflict(
dst=proj_rel_path,
src_a=os.path.join(src_a_root, src_a_relpath),
src_b=os.path.join(root, rel_path),
)
return False
# Remove the link in favor of the dir.
existing_proj_rel_path, _, _ = self._file(proj_rel_path)
self._del_file(existing_proj_rel_path)
self._add_directory(proj_rel_path, root, rel_path)
return True
elif self._in_directories(proj_rel_path):
)
return False
elif proj_rel_path in self.directories:
# No new directory, carry on.
return True
else:
# Register new directory.
self._add_directory(proj_rel_path, root, rel_path)
self.directories[proj_rel_path] = (root, rel_path)
return True
def before_visit_symlinked_dir(self, root: str, rel_path: str, depth: int) -> bool:
@@ -230,7 +132,7 @@ def before_visit_symlinked_dir(self, root: str, rel_path: str, depth: int) -> bo
if handle_as_dir:
return self.before_visit_dir(root, rel_path, depth)
self.visit_file(root, rel_path, depth, symlink=True)
self.visit_file(root, rel_path, depth)
return False
def visit_file(self, root: str, rel_path: str, depth: int, *, symlink: bool = False) -> None:
@@ -238,23 +140,30 @@ def visit_file(self, root: str, rel_path: str, depth: int, *, symlink: bool = Fa
if self.ignore(rel_path):
pass
elif self._in_directories(proj_rel_path):
# Can't create a file where a dir is, unless they are the same file (symlinked dir),
# in which case we simply drop the symlink in favor of the actual dir.
src_a = os.path.join(*self._directory(proj_rel_path))
src_b = os.path.join(root, rel_path)
if not symlink or not _samefile(src_a, src_b):
self.fatal_conflicts.append(
MergeConflict(dst=proj_rel_path, src_a=src_a, src_b=src_b)
elif proj_rel_path in self.directories:
# Can't create a file where a dir is; fatal error
self.fatal_conflicts.append(
MergeConflict(
dst=proj_rel_path,
src_a=os.path.join(*self.directories[proj_rel_path]),
src_b=os.path.join(root, rel_path),
)
elif self._in_files(proj_rel_path):
)
elif proj_rel_path in self.files:
# When two files project to the same path, they conflict iff they are distinct.
# If they are the same (i.e. one links to the other), register regular files rather
# than symlinks. The reason is that in copy-type views, we need a copy of the actual
# file, not the symlink.
src_a = os.path.join(*self._file(proj_rel_path))
src_a = os.path.join(*self.files[proj_rel_path])
src_b = os.path.join(root, rel_path)
if not _samefile(src_a, src_b):
try:
samefile = os.path.samefile(src_a, src_b)
except OSError:
samefile = False
if not samefile:
# Distinct files produce a conflict.
self.file_conflicts.append(
MergeConflict(dst=proj_rel_path, src_a=src_a, src_b=src_b)
@@ -264,12 +173,12 @@ def visit_file(self, root: str, rel_path: str, depth: int, *, symlink: bool = Fa
if not symlink:
# Remove the link in favor of the actual file. The del is necessary to maintain the
# order of the files dict, which is grouped by root.
existing_proj_rel_path, _, _ = self._file(proj_rel_path)
self._del_file(existing_proj_rel_path)
self._add_file(proj_rel_path, root, rel_path)
del self.files[proj_rel_path]
self.files[proj_rel_path] = (root, rel_path)
else:
# Otherwise register this file to be linked.
self._add_file(proj_rel_path, root, rel_path)
self.files[proj_rel_path] = (root, rel_path)
def visit_symlinked_file(self, root: str, rel_path: str, depth: int) -> None:
# Treat symlinked files as ordinary files (without "dereferencing")
@@ -288,11 +197,11 @@ def set_projection(self, projection: str) -> None:
path = ""
for part in self.projection.split(os.sep):
path = os.path.join(path, part)
if not self._in_files(path):
self._add_directory(path, "<projection>", path)
if path not in self.files:
self.directories[path] = ("<projection>", path)
else:
# Can't create a dir where a file is.
_, src_a_root, src_a_relpath = self._file(path)
src_a_root, src_a_relpath = self.files[path]
self.fatal_conflicts.append(
MergeConflict(
dst=path,
@@ -318,8 +227,8 @@ def __init__(self, source_merge_visitor: SourceMergeVisitor):
def before_visit_dir(self, root: str, rel_path: str, depth: int) -> bool:
# If destination dir is a file in a src dir, add a conflict,
# and don't traverse deeper
if self.src._in_files(rel_path):
_, src_a_root, src_a_relpath = self.src._file(rel_path)
if rel_path in self.src.files:
src_a_root, src_a_relpath = self.src.files[rel_path]
self.src.fatal_conflicts.append(
MergeConflict(
rel_path, os.path.join(src_a_root, src_a_relpath), os.path.join(root, rel_path)
@@ -329,9 +238,8 @@ def before_visit_dir(self, root: str, rel_path: str, depth: int) -> bool:
# If destination dir was also a src dir, remove the mkdir
# action, and traverse deeper.
if self.src._in_directories(rel_path):
existing_proj_rel_path, _, _ = self.src._directory(rel_path)
self.src._del_directory(existing_proj_rel_path)
if rel_path in self.src.directories:
del self.src.directories[rel_path]
return True
# If the destination dir does not appear in the src dir,
@@ -344,24 +252,38 @@ def before_visit_symlinked_dir(self, root: str, rel_path: str, depth: int) -> bo
be seen as files; we should not accidentally merge
source dir with a symlinked dest dir.
"""
self.visit_file(root, rel_path, depth)
# Never descend into symlinked target dirs.
return False
def visit_file(self, root: str, rel_path: str, depth: int) -> None:
# Can't merge a file if target already exists
if self.src._in_directories(rel_path):
_, src_a_root, src_a_relpath = self.src._directory(rel_path)
# Always conflict
if rel_path in self.src.directories:
src_a_root, src_a_relpath = self.src.directories[rel_path]
self.src.fatal_conflicts.append(
MergeConflict(
rel_path, os.path.join(src_a_root, src_a_relpath), os.path.join(root, rel_path)
)
)
elif self.src._in_files(rel_path):
_, src_a_root, src_a_relpath = self.src._file(rel_path)
if rel_path in self.src.files:
src_a_root, src_a_relpath = self.src.files[rel_path]
self.src.fatal_conflicts.append(
MergeConflict(
rel_path, os.path.join(src_a_root, src_a_relpath), os.path.join(root, rel_path)
)
)
# Never descend into symlinked target dirs.
return False
def visit_file(self, root: str, rel_path: str, depth: int) -> None:
# Can't merge a file if target already exists
if rel_path in self.src.directories:
src_a_root, src_a_relpath = self.src.directories[rel_path]
self.src.fatal_conflicts.append(
MergeConflict(
rel_path, os.path.join(src_a_root, src_a_relpath), os.path.join(root, rel_path)
)
)
elif rel_path in self.src.files:
src_a_root, src_a_relpath = self.src.files[rel_path]
self.src.fatal_conflicts.append(
MergeConflict(
rel_path, os.path.join(src_a_root, src_a_relpath), os.path.join(root, rel_path)
@@ -386,7 +308,7 @@ class LinkTree:
def __init__(self, source_root):
if not os.path.exists(source_root):
raise OSError("No such file or directory: '%s'", source_root)
raise IOError("No such file or directory: '%s'", source_root)
self._root = source_root

View File

@@ -269,7 +269,7 @@ def __init__(
@staticmethod
def _poll_interval_generator(
_wait_times: Optional[Tuple[float, float, float]] = None,
_wait_times: Optional[Tuple[float, float, float]] = None
) -> Generator[float, None, None]:
"""This implements a backoff scheme for polling a contended resource
by suggesting a succession of wait times between polls.
@@ -391,7 +391,7 @@ def _poll_lock(self, op: int) -> bool:
return True
except OSError as e:
except IOError as e:
# EAGAIN and EACCES == locked by another process (so try again)
if e.errno not in (errno.EAGAIN, errno.EACCES):
raise

View File

@@ -2,7 +2,8 @@
#
# SPDX-License-Identifier: (Apache-2.0 OR MIT)
"""Utility classes for logging the output of blocks of code."""
"""Utility classes for logging the output of blocks of code.
"""
import atexit
import ctypes
import errno
@@ -343,6 +344,26 @@ def close(self):
self.file.close()
@contextmanager
def replace_environment(env):
"""Replace the current environment (`os.environ`) with `env`.
If `env` is empty (or None), this unsets all current environment
variables.
"""
env = env or {}
old_env = os.environ.copy()
try:
os.environ.clear()
for name, val in env.items():
os.environ[name] = val
yield
finally:
os.environ.clear()
for name, val in old_env.items():
os.environ[name] = val
def log_output(*args, **kwargs):
"""Context manager that logs its output to a file.
@@ -426,6 +447,7 @@ def __init__(
self.echo = echo
self.debug = debug
self.buffer = buffer
self.env = env # the environment to use for _writer_daemon
self.filter_fn = filter_fn
self._active = False # used to prevent re-entry
@@ -497,20 +519,21 @@ def __enter__(self):
# just don't forward input if this fails
pass
self.process = multiprocessing.Process(
target=_writer_daemon,
args=(
input_fd,
read_fd,
self.write_fd,
self.echo,
self.log_file,
child_pipe,
self.filter_fn,
),
)
self.process.daemon = True # must set before start()
self.process.start()
with replace_environment(self.env):
self.process = multiprocessing.Process(
target=_writer_daemon,
args=(
input_fd,
read_fd,
self.write_fd,
self.echo,
self.log_file,
child_pipe,
self.filter_fn,
),
)
self.process.daemon = True # must set before start()
self.process.start()
finally:
if input_fd:
@@ -706,7 +729,10 @@ class winlog:
Does not support the use of 'v' toggling as nixlog does.
"""
def __init__(self, file_like=None, echo=False, debug=0, buffer=False, filter_fn=None):
def __init__(
self, file_like=None, echo=False, debug=0, buffer=False, env=None, filter_fn=None
):
self.env = env
self.debug = debug
self.echo = echo
self.logfile = file_like
@@ -763,10 +789,11 @@ def background_reader(reader, echo_writer, _kill):
reader.close()
self._active = True
self._thread = Thread(
target=background_reader, args=(self.reader, self.echo_writer, self._kill)
)
self._thread.start()
with replace_environment(self.env):
self._thread = Thread(
target=background_reader, args=(self.reader, self.echo_writer, self._kill)
)
self._thread.start()
return self
def __exit__(self, exc_type, exc_val, exc_tb):
@@ -891,7 +918,7 @@ def _writer_daemon(
try:
if stdin_file.read(1) == "v":
echo = not echo
except OSError as e:
except IOError as e:
# If SIGTTIN is ignored, the system gives EIO
# to let the caller know the read failed b/c it
# was in the bg. Ignore that too.
@@ -986,7 +1013,7 @@ def wrapped(*args, **kwargs):
while True:
try:
return function(*args, **kwargs)
except OSError as e:
except IOError as e:
if e.errno == errno.EINTR:
continue
raise

View File

@@ -10,21 +10,9 @@
import spack.util.git
#: PEP440 canonical <major>.<minor>.<micro>.<devN> string
__version__ = "1.0.0.dev0"
__version__ = "1.0.0-alpha.3"
spack_version = __version__
#: The current Package API version implemented by this version of Spack. The Package API defines
#: the Python interface for packages as well as the layout of package repositories. The minor
#: version is incremented when the package API is extended in a backwards-compatible way. The major
#: version is incremented upon breaking changes. This version is changed independently from the
#: Spack version.
package_api_version = (2, 0)
#: The minimum Package API version that this version of Spack is compatible with. This should
#: always be a tuple of the form ``(major, 0)``, since compatibility with vX.Y implies
#: compatibility with vX.0.
min_package_api_version = (1, 0)
def __try_int(v):
try:
@@ -91,6 +79,4 @@ def get_short_version() -> str:
"get_version",
"get_spack_commit",
"get_short_version",
"package_api_version",
"min_package_api_version",
]

View File

@@ -1,20 +0,0 @@
# Copyright Spack Project Developers. See COPYRIGHT file for details.
#
# SPDX-License-Identifier: (Apache-2.0 OR MIT)
"""Alias names to convert legacy compilers to builtin packages and vice-versa"""
BUILTIN_TO_LEGACY_COMPILER = {
"llvm": "clang",
"intel-oneapi-compilers": "oneapi",
"llvm-amdgpu": "rocmcc",
"intel-oneapi-compilers-classic": "intel",
"acfl": "arm",
}
LEGACY_COMPILER_TO_BUILTIN = {
"clang": "llvm",
"oneapi": "intel-oneapi-compilers",
"rocmcc": "llvm-amdgpu",
"intel": "intel-oneapi-compilers-classic",
"arm": "acfl",
}

View File

@@ -1010,7 +1010,7 @@ def _issues_in_depends_on_directive(pkgs, error_cls):
for dep_name, dep in deps_by_name.items():
def check_virtual_with_variants(spec, msg):
if not spack.repo.PATH.is_virtual(spec.name) or not spec.variants:
if not spec.virtual or not spec.variants:
return
error = error_cls(
f"{pkg_name}: {msg}",
@@ -1356,8 +1356,14 @@ def _test_detection_by_executable(pkgs, debug_log, error_cls):
def _compare_extra_attribute(_expected, _detected, *, _spec):
result = []
# Check items are of the same type
if not isinstance(_detected, type(_expected)):
_summary = f'{pkg_name}: error when trying to detect "{_expected}"'
_details = [f"{_detected} was detected instead"]
return [error_cls(summary=_summary, details=_details)]
# If they are string expected is a regex
if isinstance(_expected, str) and isinstance(_detected, str):
if isinstance(_expected, str):
try:
_regex = re.compile(_expected)
except re.error:
@@ -1373,7 +1379,7 @@ def _compare_extra_attribute(_expected, _detected, *, _spec):
_details = [f"{_detected} does not match the regex"]
return [error_cls(summary=_summary, details=_details)]
elif isinstance(_expected, dict) and isinstance(_detected, dict):
if isinstance(_expected, dict):
_not_detected = set(_expected.keys()) - set(_detected.keys())
if _not_detected:
_summary = f"{pkg_name}: cannot detect some attributes for spec {_spec}"
@@ -1388,10 +1394,6 @@ def _compare_extra_attribute(_expected, _detected, *, _spec):
result.extend(
_compare_extra_attribute(_expected[_key], _detected[_key], _spec=_spec)
)
else:
_summary = f'{pkg_name}: error when trying to detect "{_expected}"'
_details = [f"{_detected} was detected instead"]
return [error_cls(summary=_summary, details=_details)]
return result

File diff suppressed because it is too large Load Diff

View File

@@ -5,14 +5,12 @@
import fnmatch
import glob
import importlib
import os
import os.path
import re
import sys
import sysconfig
import warnings
from typing import Optional, Sequence, Union
from typing_extensions import TypedDict
from typing import Dict, Optional, Sequence, Union
import archspec.cpu
@@ -20,17 +18,13 @@
from llnl.util import tty
import spack.platforms
import spack.spec
import spack.store
import spack.util.environment
import spack.util.executable
from .config import spec_for_current_python
class QueryInfo(TypedDict, total=False):
spec: spack.spec.Spec
command: spack.util.executable.Executable
QueryInfo = Dict[str, "spack.spec.Spec"]
def _python_import(module: str) -> bool:
@@ -217,9 +211,7 @@ def _executables_in_store(
):
spack.util.environment.path_put_first("PATH", [bin_dir])
if query_info is not None:
query_info["command"] = spack.util.executable.which(
*executables, path=bin_dir, required=True
)
query_info["command"] = spack.util.executable.which(*executables, path=bin_dir)
query_info["spec"] = concrete_spec
return True
return False
@@ -234,6 +226,15 @@ def _root_spec(spec_str: str) -> str:
# Add a compiler and platform requirement to the root spec.
platform = str(spack.platforms.host())
# FIXME (compiler as nodes): recover the compiler for source bootstrapping
# if platform == "darwin":
# spec_str += " %apple-clang"
if platform == "windows":
spec_str += " %msvc"
# elif platform == "linux":
# spec_str += " %gcc"
elif platform == "freebsd":
spec_str += " %clang"
spec_str += f" platform={platform}"
target = archspec.cpu.host().family
spec_str += f" target={target}"

View File

@@ -29,9 +29,9 @@
class ClingoBootstrapConcretizer:
def __init__(self, configuration):
self.host_platform = spack.platforms.host()
self.host_os = self.host_platform.default_operating_system()
self.host_os = self.host_platform.operating_system("frontend")
self.host_target = archspec.cpu.host().family
self.host_architecture = spack.spec.ArchSpec.default_arch()
self.host_architecture = spack.spec.ArchSpec.frontend_arch()
self.host_architecture.target = str(self.host_target)
self.host_compiler = self._valid_compiler_or_raise()
self.host_python = self.python_external_spec()

View File

@@ -4,7 +4,7 @@
"""Manage configuration swapping for bootstrapping purposes"""
import contextlib
import os
import os.path
import sys
from typing import Any, Dict, Generator, MutableSequence, Sequence
@@ -141,7 +141,7 @@ def _bootstrap_config_scopes() -> Sequence["spack.config.ConfigScope"]:
def _add_compilers_if_missing() -> None:
arch = spack.spec.ArchSpec.default_arch()
arch = spack.spec.ArchSpec.frontend_arch()
if not spack.compilers.config.compilers_for_arch(arch):
spack.compilers.config.find_compilers()

View File

@@ -25,6 +25,7 @@
import functools
import json
import os
import os.path
import sys
import uuid
from typing import Any, Callable, Dict, List, Optional, Tuple
@@ -33,10 +34,8 @@
from llnl.util.lang import GroupedExceptionHandler
import spack.binary_distribution
import spack.concretize
import spack.config
import spack.detection
import spack.error
import spack.mirrors.mirror
import spack.platforms
import spack.spec
@@ -45,17 +44,10 @@
import spack.util.executable
import spack.util.path
import spack.util.spack_yaml
import spack.util.url
import spack.version
from spack.installer import PackageInstaller
from ._common import (
QueryInfo,
_executables_in_store,
_python_import,
_root_spec,
_try_import_from_store,
)
from ._common import _executables_in_store, _python_import, _root_spec, _try_import_from_store
from .clingo import ClingoBootstrapConcretizer
from .config import spack_python_interpreter, spec_for_current_python
@@ -97,12 +89,8 @@ def __init__(self, conf: ConfigDictionary) -> None:
self.name = conf["name"]
self.metadata_dir = spack.util.path.canonicalize_path(conf["metadata"])
# Check for relative paths, and turn them into absolute paths
# root is the metadata_dir
maybe_url = conf["info"]["url"]
if spack.util.url.is_path_instead_of_url(maybe_url) and not os.path.isabs(maybe_url):
maybe_url = os.path.join(self.metadata_dir, maybe_url)
self.url = spack.mirrors.mirror.Mirror(maybe_url).fetch_url
# Promote (relative) paths to file urls
self.url = spack.mirrors.mirror.Mirror(conf["info"]["url"]).fetch_url
@property
def mirror_scope(self) -> spack.config.InternalConfigScope:
@@ -146,7 +134,7 @@ class BuildcacheBootstrapper(Bootstrapper):
def __init__(self, conf) -> None:
super().__init__(conf)
self.last_search: Optional[QueryInfo] = None
self.last_search: Optional[ConfigDictionary] = None
self.config_scope_name = f"bootstrap_buildcache-{uuid.uuid4()}"
@staticmethod
@@ -223,14 +211,14 @@ def _install_and_test(
for _, pkg_hash, pkg_sha256 in item["binaries"]:
self._install_by_hash(pkg_hash, pkg_sha256, bincache_platform)
info: QueryInfo = {}
info: ConfigDictionary = {}
if test_fn(query_spec=abstract_spec, query_info=info):
self.last_search = info
return True
return False
def try_import(self, module: str, abstract_spec_str: str) -> bool:
info: QueryInfo
info: ConfigDictionary
test_fn, info = functools.partial(_try_import_from_store, module), {}
if test_fn(query_spec=abstract_spec_str, query_info=info):
return True
@@ -243,7 +231,7 @@ def try_import(self, module: str, abstract_spec_str: str) -> bool:
return self._install_and_test(abstract_spec, bincache_platform, data, test_fn)
def try_search_path(self, executables: Tuple[str], abstract_spec_str: str) -> bool:
info: QueryInfo
info: ConfigDictionary
test_fn, info = functools.partial(_executables_in_store, executables), {}
if test_fn(query_spec=abstract_spec_str, query_info=info):
self.last_search = info
@@ -261,11 +249,11 @@ class SourceBootstrapper(Bootstrapper):
def __init__(self, conf) -> None:
super().__init__(conf)
self.last_search: Optional[QueryInfo] = None
self.last_search: Optional[ConfigDictionary] = None
self.config_scope_name = f"bootstrap_source-{uuid.uuid4()}"
def try_import(self, module: str, abstract_spec_str: str) -> bool:
info: QueryInfo = {}
info: ConfigDictionary = {}
if _try_import_from_store(module, abstract_spec_str, query_info=info):
self.last_search = info
return True
@@ -282,10 +270,10 @@ def try_import(self, module: str, abstract_spec_str: str) -> bool:
bootstrapper = ClingoBootstrapConcretizer(configuration=spack.config.CONFIG)
concrete_spec = bootstrapper.concretize()
else:
abstract_spec = spack.spec.Spec(
concrete_spec = spack.spec.Spec(
abstract_spec_str + " ^" + spec_for_current_python()
)
concrete_spec = spack.concretize.concretize_one(abstract_spec)
concrete_spec.concretize()
msg = "[BOOTSTRAP MODULE {0}] Try installing '{1}' from sources"
tty.debug(msg.format(module, abstract_spec_str))
@@ -305,7 +293,7 @@ def try_import(self, module: str, abstract_spec_str: str) -> bool:
return False
def try_search_path(self, executables: Tuple[str], abstract_spec_str: str) -> bool:
info: QueryInfo = {}
info: ConfigDictionary = {}
if _executables_in_store(executables, abstract_spec_str, query_info=info):
self.last_search = info
return True
@@ -316,7 +304,7 @@ def try_search_path(self, executables: Tuple[str], abstract_spec_str: str) -> bo
# might reduce compilation time by a fair amount
_add_externals_if_missing()
concrete_spec = spack.concretize.concretize_one(abstract_spec_str)
concrete_spec = spack.spec.Spec(abstract_spec_str).concretized()
msg = "[BOOTSTRAP] Try installing '{0}' from sources"
tty.debug(msg.format(abstract_spec_str))
with spack.config.override(self.mirror_scope):
@@ -333,9 +321,10 @@ def create_bootstrapper(conf: ConfigDictionary):
return _bootstrap_methods[btype](conf)
def source_is_enabled(conf: ConfigDictionary) -> bool:
"""Returns true if the source is not enabled for bootstrapping"""
return spack.config.get("bootstrap:trusted").get(conf["name"], False)
def source_is_enabled(conf: ConfigDictionary):
"""Raise ValueError if the source is not enabled for bootstrapping"""
trusted, name = spack.config.get("bootstrap:trusted"), conf["name"]
return trusted.get(name, False)
def ensure_module_importable_or_raise(module: str, abstract_spec: Optional[str] = None):
@@ -369,20 +358,18 @@ def ensure_module_importable_or_raise(module: str, abstract_spec: Optional[str]
continue
with exception_handler.forward(current_config["name"], Exception):
if create_bootstrapper(current_config).try_import(module, abstract_spec):
current_bootstrapper = create_bootstrapper(current_config)
if current_bootstrapper.try_import(module, abstract_spec):
return
assert exception_handler, (
f"expected at least one exception to have been raised at this point: "
f"while bootstrapping {module}"
)
msg = f'cannot bootstrap the "{module}" Python module '
if abstract_spec:
msg += f'from spec "{abstract_spec}" '
if not exception_handler:
msg += ": no bootstrapping sources are enabled"
elif spack.error.debug or spack.error.SHOW_BACKTRACE:
msg += exception_handler.grouped_message(with_tracebacks=True)
else:
msg += exception_handler.grouped_message(with_tracebacks=False)
msg += "\nRun `spack --backtrace ...` for more detailed errors"
msg += exception_handler.grouped_message(with_tracebacks=tty.is_debug())
raise ImportError(msg)
@@ -430,7 +417,6 @@ def ensure_executables_in_path_or_raise(
current_bootstrapper.last_search["spec"],
current_bootstrapper.last_search["command"],
)
assert cmd is not None, "expected an Executable"
cmd.add_default_envmod(
spack.user_environment.environment_modifications_for_specs(
concrete_spec, set_package_py_globals=False
@@ -438,17 +424,18 @@ def ensure_executables_in_path_or_raise(
)
return cmd
assert exception_handler, (
f"expected at least one exception to have been raised at this point: "
f"while bootstrapping {executables_str}"
)
msg = f"cannot bootstrap any of the {executables_str} executables "
if abstract_spec:
msg += f'from spec "{abstract_spec}" '
if not exception_handler:
msg += ": no bootstrapping sources are enabled"
elif spack.error.debug or spack.error.SHOW_BACKTRACE:
if tty.is_debug():
msg += exception_handler.grouped_message(with_tracebacks=True)
else:
msg += exception_handler.grouped_message(with_tracebacks=False)
msg += "\nRun `spack --backtrace ...` for more detailed errors"
msg += "\nRun `spack --debug ...` for more detailed errors"
raise RuntimeError(msg)

View File

@@ -133,7 +133,7 @@ def mypy_root_spec() -> str:
def black_root_spec() -> str:
"""Return the root spec used to bootstrap black"""
return _root_spec("py-black@:25.1.0")
return _root_spec("py-black@:24.1.0")
def flake8_root_spec() -> str:

View File

@@ -63,6 +63,7 @@ def _missing(name: str, purpose: str, system_only: bool = True) -> str:
def _core_requirements() -> List[RequiredResponseType]:
_core_system_exes = {
"make": _missing("make", "required to build software from sources"),
"patch": _missing("patch", "required to patch source code before building"),
"tar": _missing("tar", "required to manage code archives"),
"gzip": _missing("gzip", "required to compress/decompress code archives"),

View File

@@ -36,28 +36,14 @@
import multiprocessing
import os
import re
import signal
import sys
import traceback
import types
import warnings
from collections import defaultdict
from enum import Flag, auto
from itertools import chain
from multiprocessing.connection import Connection
from typing import (
Callable,
Dict,
List,
Optional,
Sequence,
Set,
TextIO,
Tuple,
Type,
Union,
overload,
)
from typing import Callable, Dict, List, Optional, Set, Tuple
import archspec.cpu
@@ -93,7 +79,6 @@
from spack.util.environment import (
SYSTEM_DIR_CASE_ENTRY,
EnvironmentModifications,
ModificationList,
PrependPath,
env_flag,
filter_system_paths,
@@ -115,7 +100,7 @@
# set_wrapper_variables and used to pass parameters to
# Spack's compiler wrappers.
#
SPACK_COMPILER_WRAPPER_PATH = "SPACK_COMPILER_WRAPPER_PATH"
SPACK_ENV_PATH = "SPACK_ENV_PATH"
SPACK_MANAGED_DIRS = "SPACK_MANAGED_DIRS"
SPACK_INCLUDE_DIRS = "SPACK_INCLUDE_DIRS"
SPACK_LINK_DIRS = "SPACK_LINK_DIRS"
@@ -160,128 +145,48 @@ def get_effective_jobs(jobs, parallel=True, supports_jobserver=False):
class MakeExecutable(Executable):
"""Special callable executable object for make so the user can specify parallelism options
on a per-invocation basis.
"""Special callable executable object for make so the user can specify
parallelism options on a per-invocation basis. Specifying
'parallel' to the call will override whatever the package's
global setting is, so you can either default to true or false and
override particular calls. Specifying 'jobs_env' to a particular
call will name an environment variable which will be set to the
parallelism level (without affecting the normal invocation with
-j).
"""
def __init__(self, name: str, *, jobs: int, supports_jobserver: bool = True) -> None:
super().__init__(name)
def __init__(self, name, jobs, **kwargs):
supports_jobserver = kwargs.pop("supports_jobserver", True)
super().__init__(name, **kwargs)
self.supports_jobserver = supports_jobserver
self.jobs = jobs
@overload
def __call__(
self,
*args: str,
parallel: bool = ...,
jobs_env: Optional[str] = ...,
jobs_env_supports_jobserver: bool = ...,
fail_on_error: bool = ...,
ignore_errors: Union[int, Sequence[int]] = ...,
ignore_quotes: Optional[bool] = ...,
timeout: Optional[int] = ...,
env: Optional[Union[Dict[str, str], EnvironmentModifications]] = ...,
extra_env: Optional[Union[Dict[str, str], EnvironmentModifications]] = ...,
input: Optional[TextIO] = ...,
output: Union[Optional[TextIO], str] = ...,
error: Union[Optional[TextIO], str] = ...,
_dump_env: Optional[Dict[str, str]] = ...,
) -> None: ...
@overload
def __call__(
self,
*args: str,
parallel: bool = ...,
jobs_env: Optional[str] = ...,
jobs_env_supports_jobserver: bool = ...,
fail_on_error: bool = ...,
ignore_errors: Union[int, Sequence[int]] = ...,
ignore_quotes: Optional[bool] = ...,
timeout: Optional[int] = ...,
env: Optional[Union[Dict[str, str], EnvironmentModifications]] = ...,
extra_env: Optional[Union[Dict[str, str], EnvironmentModifications]] = ...,
input: Optional[TextIO] = ...,
output: Union[Type[str], Callable] = ...,
error: Union[Optional[TextIO], str, Type[str], Callable] = ...,
_dump_env: Optional[Dict[str, str]] = ...,
) -> str: ...
@overload
def __call__(
self,
*args: str,
parallel: bool = ...,
jobs_env: Optional[str] = ...,
jobs_env_supports_jobserver: bool = ...,
fail_on_error: bool = ...,
ignore_errors: Union[int, Sequence[int]] = ...,
ignore_quotes: Optional[bool] = ...,
timeout: Optional[int] = ...,
env: Optional[Union[Dict[str, str], EnvironmentModifications]] = ...,
extra_env: Optional[Union[Dict[str, str], EnvironmentModifications]] = ...,
input: Optional[TextIO] = ...,
output: Union[Optional[TextIO], str, Type[str], Callable] = ...,
error: Union[Type[str], Callable] = ...,
_dump_env: Optional[Dict[str, str]] = ...,
) -> str: ...
def __call__(
self,
*args: str,
parallel: bool = True,
jobs_env: Optional[str] = None,
jobs_env_supports_jobserver: bool = False,
**kwargs,
) -> Optional[str]:
"""Runs this "make" executable in a subprocess.
Args:
parallel: if False, parallelism is disabled
jobs_env: environment variable that will be set to the current level of parallelism
jobs_env_supports_jobserver: whether the jobs env supports a job server
For all the other **kwargs, refer to the base class.
def __call__(self, *args, **kwargs):
"""parallel, and jobs_env from kwargs are swallowed and used here;
remaining arguments are passed through to the superclass.
"""
parallel = kwargs.pop("parallel", True)
jobs_env = kwargs.pop("jobs_env", None)
jobs_env_supports_jobserver = kwargs.pop("jobs_env_supports_jobserver", False)
jobs = get_effective_jobs(
self.jobs, parallel=parallel, supports_jobserver=self.supports_jobserver
)
if jobs is not None:
args = (f"-j{jobs}",) + args
args = ("-j{0}".format(jobs),) + args
if jobs_env:
# Caller wants us to set an environment variable to control the parallelism
# Caller wants us to set an environment variable to
# control the parallelism.
jobs_env_jobs = get_effective_jobs(
self.jobs, parallel=parallel, supports_jobserver=jobs_env_supports_jobserver
)
if jobs_env_jobs is not None:
extra_env = kwargs.setdefault("extra_env", {})
extra_env.update({jobs_env: str(jobs_env_jobs)})
kwargs["extra_env"] = {jobs_env: str(jobs_env_jobs)}
return super().__call__(*args, **kwargs)
class UndeclaredDependencyError(spack.error.SpackError):
"""Raised if a dependency is invoking an executable through a module global, without
declaring a dependency on it.
"""
class DeprecatedExecutable:
def __init__(self, pkg: str, exe: str, exe_pkg: str) -> None:
self.pkg = pkg
self.exe = exe
self.exe_pkg = exe_pkg
def __call__(self, *args, **kwargs):
raise UndeclaredDependencyError(
f"{self.pkg} is using {self.exe} without declaring a dependency on {self.exe_pkg}"
)
def add_default_env(self, key: str, value: str):
self.__call__()
def clean_environment():
# Stuff in here sanitizes the build environment to eliminate
# anything the user has set that may interfere. We apply it immediately
@@ -303,13 +208,11 @@ def clean_environment():
env.unset("CPLUS_INCLUDE_PATH")
env.unset("OBJC_INCLUDE_PATH")
# prevent configure scripts from sourcing variables from config site file (AC_SITE_LOAD).
env.set("CONFIG_SITE", os.devnull)
env.unset("CMAKE_PREFIX_PATH")
env.unset("PYTHONPATH")
env.unset("R_HOME")
env.unset("R_ENVIRON")
env.unset("LUA_PATH")
env.unset("LUA_CPATH")
@@ -571,13 +474,16 @@ def set_package_py_globals(pkg, context: Context = Context.BUILD):
module.std_meson_args = spack.build_systems.meson.MesonBuilder.std_args(pkg)
module.std_pip_args = spack.build_systems.python.PythonPipBuilder.std_args(pkg)
module.make = DeprecatedExecutable(pkg.name, "make", "gmake")
module.gmake = DeprecatedExecutable(pkg.name, "gmake", "gmake")
module.ninja = DeprecatedExecutable(pkg.name, "ninja", "ninja")
# TODO: make these build deps that can be installed if not found.
module.make = MakeExecutable("make", jobs)
module.gmake = MakeExecutable("gmake", jobs)
module.ninja = MakeExecutable("ninja", jobs, supports_jobserver=False)
# TODO: johnwparent: add package or builder support to define these build tools
# for now there is no entrypoint for builders to define these on their
# own
if sys.platform == "win32":
module.nmake = DeprecatedExecutable(pkg.name, "nmake", "msvc")
module.msbuild = DeprecatedExecutable(pkg.name, "msbuild", "msvc")
module.nmake = Executable("nmake")
module.msbuild = Executable("msbuild")
# analog to configure for win32
module.cscript = Executable("cscript")
@@ -715,6 +621,21 @@ def get_rpath_deps(pkg: spack.package_base.PackageBase) -> List[spack.spec.Spec]
return _get_rpath_deps_from_spec(pkg.spec, pkg.transitive_rpaths)
def load_external_modules(pkg):
"""Traverse a package's spec DAG and load any external modules.
Traverse a package's dependencies and load any external modules
associated with them.
Args:
pkg (spack.package_base.PackageBase): package to load deps for
"""
for dep in list(pkg.spec.traverse()):
external_modules = dep.external_modules or []
for external_module in external_modules:
load_module(external_module)
def setup_package(pkg, dirty, context: Context = Context.BUILD):
"""Execute all environment setup routines."""
if context not in (Context.BUILD, Context.TEST):
@@ -747,25 +668,10 @@ def setup_package(pkg, dirty, context: Context = Context.BUILD):
tty.debug("setup_package: collected all modifications from dependencies")
tty.debug("setup_package: adding compiler wrappers paths")
env_by_name = env_mods.group_by_name()
for x in env_by_name["SPACK_COMPILER_WRAPPER_PATH"]:
assert isinstance(
x, PrependPath
), "unexpected setting used for SPACK_COMPILER_WRAPPER_PATH"
for x in env_mods.group_by_name()["SPACK_ENV_PATH"]:
assert isinstance(x, PrependPath), "unexpected setting used for SPACK_ENV_PATH"
env_mods.prepend_path("PATH", x.value)
# Check whether we want to force RPATH or RUNPATH
enable_var_name, disable_var_name = "SPACK_ENABLE_NEW_DTAGS", "SPACK_DISABLE_NEW_DTAGS"
if enable_var_name in env_by_name and disable_var_name in env_by_name:
enable_new_dtags = _extract_dtags_arg(env_by_name, var_name=enable_var_name)
disable_new_dtags = _extract_dtags_arg(env_by_name, var_name=disable_var_name)
if spack.config.CONFIG.get("config:shared_linking:type") == "rpath":
env_mods.set("SPACK_DTAGS_TO_STRIP", enable_new_dtags)
env_mods.set("SPACK_DTAGS_TO_ADD", disable_new_dtags)
else:
env_mods.set("SPACK_DTAGS_TO_STRIP", disable_new_dtags)
env_mods.set("SPACK_DTAGS_TO_ADD", enable_new_dtags)
if context == Context.TEST:
env_mods.prepend_path("PATH", ".")
elif context == Context.BUILD and not dirty and not env_mods.is_unset("CPATH"):
@@ -779,7 +685,7 @@ def setup_package(pkg, dirty, context: Context = Context.BUILD):
# Load modules on an already clean environment, just before applying Spack's
# own environment modifications. This ensures Spack controls CC/CXX/... variables.
load_external_modules(setup_context)
load_external_modules(pkg)
# Make sure nothing's strange about the Spack environment.
validate(env_mods, tty.warn)
@@ -790,14 +696,6 @@ def setup_package(pkg, dirty, context: Context = Context.BUILD):
return env_base
def _extract_dtags_arg(env_by_name: Dict[str, ModificationList], *, var_name: str) -> str:
try:
enable_new_dtags = env_by_name[var_name][0].value # type: ignore[union-attr]
except (KeyError, IndexError, AttributeError):
enable_new_dtags = ""
return enable_new_dtags
class EnvironmentVisitor:
def __init__(self, *roots: spack.spec.Spec, context: Context):
# For the roots (well, marked specs) we follow different edges
@@ -1076,21 +974,6 @@ def _make_runnable(self, dep: spack.spec.Spec, env: EnvironmentModifications):
env.prepend_path("PATH", bin_dir)
def load_external_modules(context: SetupContext) -> None:
"""Traverse a package's spec DAG and load any external modules.
Traverse a package's dependencies and load any external modules
associated with them.
Args:
context: A populated SetupContext object
"""
for spec, _ in context.external:
external_modules = spec.external_modules or []
for external_module in external_modules:
load_module(external_module)
def _setup_pkg_and_run(
serialized_pkg: "spack.subprocess_context.PackageInstallContext",
function: Callable,
@@ -1189,9 +1072,11 @@ def _setup_pkg_and_run(
if isinstance(e, (spack.multimethod.NoSuchMethodError, AttributeError)):
process = "test the installation" if context == "test" else "build from sources"
error_msg = (
"The '{}' package cannot find an attribute while trying to {}. You can fix this "
"by updating the {} recipe, and you can also report the issue as a build-error or "
"a bug at https://github.com/spack/spack/issues"
"The '{}' package cannot find an attribute while trying to {}. "
"This might be due to a change in Spack's package format "
"to support multiple build-systems for a single package. You can fix this "
"by updating the {} recipe, and you can also report the issue as a bug. "
"More information at https://spack.readthedocs.io/en/latest/packaging_guide.html#installation-procedure"
).format(pkg.name, process, context)
error_msg = colorize("@*R{{{}}}".format(error_msg))
error_msg = "{}\n\n{}".format(str(e), error_msg)
@@ -1216,45 +1101,15 @@ def _setup_pkg_and_run(
input_pipe.close()
class BuildProcess:
def __init__(self, *, target, args) -> None:
self.p = multiprocessing.Process(target=target, args=args)
def start(self) -> None:
self.p.start()
def is_alive(self) -> bool:
return self.p.is_alive()
def join(self, *, timeout: Optional[int] = None):
self.p.join(timeout=timeout)
def terminate(self):
# Opportunity for graceful termination
self.p.terminate()
self.p.join(timeout=1)
# If the process didn't gracefully terminate, forcefully kill
if self.p.is_alive():
# TODO (python 3.6 removal): use self.p.kill() instead, consider removing this class
assert isinstance(self.p.pid, int), f"unexpected value for PID: {self.p.pid}"
os.kill(self.p.pid, signal.SIGKILL)
self.p.join()
@property
def exitcode(self):
return self.p.exitcode
def start_build_process(pkg, function, kwargs, *, timeout: Optional[int] = None):
def start_build_process(pkg, function, kwargs):
"""Create a child process to do part of a spack build.
Args:
pkg (spack.package_base.PackageBase): package whose environment we should set up the
child process for.
function (typing.Callable): argless function to run in the child process.
timeout: maximum time allowed to finish the execution of function
function (typing.Callable): argless function to run in the child
process.
Usage::
@@ -1282,14 +1137,14 @@ def child_fun():
# Forward sys.stdin when appropriate, to allow toggling verbosity
if sys.platform != "win32" and sys.stdin.isatty() and hasattr(sys.stdin, "fileno"):
input_fd = Connection(os.dup(sys.stdin.fileno()))
mflags = os.environ.get("MAKEFLAGS")
if mflags is not None:
mflags = os.environ.get("MAKEFLAGS", False)
if mflags:
m = re.search(r"--jobserver-[^=]*=(\d),(\d)", mflags)
if m:
jobserver_fd1 = Connection(int(m.group(1)))
jobserver_fd2 = Connection(int(m.group(2)))
p = BuildProcess(
p = multiprocessing.Process(
target=_setup_pkg_and_run,
args=(
serialized_pkg,
@@ -1323,17 +1178,14 @@ def exitcode_msg(p):
typ = "exit" if p.exitcode >= 0 else "signal"
return f"{typ} {abs(p.exitcode)}"
p.join(timeout=timeout)
if p.is_alive():
warnings.warn(f"Terminating process, since the timeout of {timeout}s was exceeded")
p.terminate()
p.join()
try:
child_result = read_pipe.recv()
except EOFError:
p.join()
raise InstallError(f"The process has stopped unexpectedly ({exitcode_msg(p)})")
p.join()
# If returns a StopPhase, raise it
if isinstance(child_result, spack.error.StopPhase):
# do not print

View File

@@ -6,9 +6,7 @@
import llnl.util.filesystem as fs
import spack.directives
import spack.spec
import spack.util.executable
import spack.util.prefix
from .autotools import AutotoolsBuilder, AutotoolsPackage
@@ -19,18 +17,19 @@ class AspellBuilder(AutotoolsBuilder):
to the Aspell extensions.
"""
def configure(
self,
pkg: "AspellDictPackage", # type: ignore[override]
spec: spack.spec.Spec,
prefix: spack.util.prefix.Prefix,
):
def configure(self, pkg, spec, prefix):
aspell = spec["aspell"].prefix.bin.aspell
prezip = spec["aspell"].prefix.bin.prezip
destdir = prefix
sh = spack.util.executable.Executable("/bin/sh")
sh("./configure", "--vars", f"ASPELL={aspell}", f"PREZIP={prezip}", f"DESTDIR={destdir}")
sh = spack.util.executable.which("sh")
sh(
"./configure",
"--vars",
"ASPELL={0}".format(aspell),
"PREZIP={0}".format(prezip),
"DESTDIR={0}".format(destdir),
)
# Aspell dictionaries install their bits into their prefix.lib

View File

@@ -2,6 +2,7 @@
#
# SPDX-License-Identifier: (Apache-2.0 OR MIT)
import os
import os.path
import stat
import subprocess
from typing import Callable, List, Optional, Set, Tuple, Union
@@ -16,7 +17,6 @@
import spack.package_base
import spack.phase_callbacks
import spack.spec
import spack.util.environment
import spack.util.prefix
from spack.directives import build_system, conflicts, depends_on
from spack.multimethod import when
@@ -357,13 +357,6 @@ def _do_patch_libtool_configure(self) -> None:
)
# Support Libtool 2.4.2 and older:
x.filter(regex=r'^(\s*test \$p = "-R")(; then\s*)$', repl=r'\1 || test x-l = x"$p"\2')
# Configure scripts generated with libtool < 2.5.4 have a faulty test for the
# -single_module linker flag. A deprecation warning makes it think the default is
# -multi_module, triggering it to use problematic linker flags (such as ld -r). The
# linker default is `-single_module` from (ancient) macOS 10.4, so override by setting
# `lt_cv_apple_cc_single_mod=yes`. See the fix in libtool commit
# 82f7f52123e4e7e50721049f7fa6f9b870e09c9d.
x.filter("lt_cv_apple_cc_single_mod=no", "lt_cv_apple_cc_single_mod=yes", string=True)
@spack.phase_callbacks.run_after("configure")
def _do_patch_libtool(self) -> None:
@@ -546,7 +539,7 @@ def build_directory(self) -> str:
return build_dir
@spack.phase_callbacks.run_before("autoreconf")
def _delete_configure_to_force_update(self) -> None:
def delete_configure_to_force_update(self) -> None:
if self.force_autoreconf:
fs.force_remove(self.configure_abs_path)
@@ -559,7 +552,7 @@ def autoreconf_search_path_args(self) -> List[str]:
return _autoreconf_search_path_args(self.spec)
@spack.phase_callbacks.run_after("autoreconf")
def _set_configure_or_die(self) -> None:
def set_configure_or_die(self) -> None:
"""Ensure the presence of a "configure" script, or raise. If the "configure"
is found, a module level attribute is set.
@@ -583,7 +576,10 @@ def configure_args(self) -> List[str]:
return []
def autoreconf(
self, pkg: AutotoolsPackage, spec: spack.spec.Spec, prefix: spack.util.prefix.Prefix
self,
pkg: spack.package_base.PackageBase,
spec: spack.spec.Spec,
prefix: spack.util.prefix.Prefix,
) -> None:
"""Not needed usually, configure should be already there"""
@@ -612,7 +608,10 @@ def autoreconf(
self.pkg.module.autoreconf(*autoreconf_args)
def configure(
self, pkg: AutotoolsPackage, spec: spack.spec.Spec, prefix: spack.util.prefix.Prefix
self,
pkg: spack.package_base.PackageBase,
spec: spack.spec.Spec,
prefix: spack.util.prefix.Prefix,
) -> None:
"""Run "configure", with the arguments specified by the builder and an
appropriately set prefix.
@@ -625,7 +624,10 @@ def configure(
pkg.module.configure(*options)
def build(
self, pkg: AutotoolsPackage, spec: spack.spec.Spec, prefix: spack.util.prefix.Prefix
self,
pkg: spack.package_base.PackageBase,
spec: spack.spec.Spec,
prefix: spack.util.prefix.Prefix,
) -> None:
"""Run "make" on the build targets specified by the builder."""
# See https://autotools.io/automake/silent.html
@@ -635,7 +637,10 @@ def build(
pkg.module.make(*params)
def install(
self, pkg: AutotoolsPackage, spec: spack.spec.Spec, prefix: spack.util.prefix.Prefix
self,
pkg: spack.package_base.PackageBase,
spec: spack.spec.Spec,
prefix: spack.util.prefix.Prefix,
) -> None:
"""Run "make" on the install targets specified by the builder."""
with fs.working_dir(self.build_directory):
@@ -832,7 +837,7 @@ def installcheck(self) -> None:
self.pkg._if_make_target_execute("installcheck")
@spack.phase_callbacks.run_after("install")
def _remove_libtool_archives(self) -> None:
def remove_libtool_archives(self) -> None:
"""Remove all .la files in prefix sub-folders if the package sets
``install_libtool_archives`` to be False.
"""
@@ -847,9 +852,7 @@ def _remove_libtool_archives(self) -> None:
with open(self._removed_la_files_log, mode="w", encoding="utf-8") as f:
f.write("\n".join(libtool_files))
def setup_build_environment(
self, env: spack.util.environment.EnvironmentModifications
) -> None:
def setup_build_environment(self, env):
if self.spec.platform == "darwin" and macos_version() >= Version("11"):
# Many configure files rely on matching '10.*' for macOS version
# detection and fail to add flags if it shows as version 11.

View File

@@ -2,19 +2,15 @@
#
# SPDX-License-Identifier: (Apache-2.0 OR MIT)
import collections.abc
import enum
import os
import re
from typing import Optional, Tuple
from typing import Tuple
import llnl.util.filesystem as fs
import llnl.util.tty as tty
import spack.phase_callbacks
import spack.spec
import spack.util.prefix
from spack.directives import depends_on
from spack.util.executable import which_string
from .cmake import CMakeBuilder, CMakePackage
@@ -72,8 +68,7 @@ class CachedCMakeBuilder(CMakeBuilder):
@property
def cache_name(self):
compiler_str = f"{self.spec['c'].name}-{self.spec['c'].version}"
return f"{self.pkg.name}-{self.spec.architecture.platform}-{compiler_str}.cmake"
return f"{self.pkg.name}-{self.spec.architecture.platform}-{self.spec.dag_hash()}.cmake"
@property
def cache_path(self):
@@ -180,64 +175,6 @@ def initconfig_compiler_entries(self):
return entries
class Scheduler(enum.Enum):
LSF = enum.auto()
SLURM = enum.auto()
FLUX = enum.auto()
def get_scheduler(self) -> Optional[Scheduler]:
spec = self.pkg.spec
# Check for Spectrum-mpi, which always uses LSF or LSF MPI variant
if spec.satisfies("^spectrum-mpi") or spec["mpi"].satisfies("schedulers=lsf"):
return self.Scheduler.LSF
# Check for Slurm MPI variants
slurm_checks = ["+slurm", "schedulers=slurm", "process_managers=slurm"]
if any(spec["mpi"].satisfies(variant) for variant in slurm_checks):
return self.Scheduler.SLURM
# TODO improve this when MPI implementations support flux
# Do this check last to avoid using a flux wrapper present next to Slurm/ LSF schedulers
if which_string("flux") is not None:
return self.Scheduler.FLUX
return None
def get_mpi_exec(self) -> Optional[str]:
spec = self.pkg.spec
scheduler = self.get_scheduler()
if scheduler == self.Scheduler.LSF:
return which_string("lrun")
elif scheduler == self.Scheduler.SLURM:
if spec["mpi"].external:
return which_string("srun")
else:
return os.path.join(spec["slurm"].prefix.bin, "srun")
elif scheduler == self.Scheduler.FLUX:
flux = which_string("flux")
return f"{flux};run" if flux else None
elif hasattr(spec["mpi"].package, "mpiexec"):
return spec["mpi"].package.mpiexec
else:
mpiexec = os.path.join(spec["mpi"].prefix.bin, "mpirun")
if not os.path.exists(mpiexec):
mpiexec = os.path.join(spec["mpi"].prefix.bin, "mpiexec")
return mpiexec
def get_mpi_exec_num_proc(self) -> str:
scheduler = self.get_scheduler()
if scheduler in [self.Scheduler.FLUX, self.Scheduler.LSF, self.Scheduler.SLURM]:
return "-n"
else:
return "-np"
def initconfig_mpi_entries(self):
spec = self.pkg.spec
@@ -257,10 +194,27 @@ def initconfig_mpi_entries(self):
if hasattr(spec["mpi"], "mpifc"):
entries.append(cmake_cache_path("MPI_Fortran_COMPILER", spec["mpi"].mpifc))
# Determine MPIEXEC
mpiexec = self.get_mpi_exec()
# Check for slurm
using_slurm = False
slurm_checks = ["+slurm", "schedulers=slurm", "process_managers=slurm"]
if any(spec["mpi"].satisfies(variant) for variant in slurm_checks):
using_slurm = True
if mpiexec is None or not os.path.exists(mpiexec.split(";")[0]):
# Determine MPIEXEC
if using_slurm:
if spec["mpi"].external:
# Heuristic until we have dependents on externals
mpiexec = "/usr/bin/srun"
else:
mpiexec = os.path.join(spec["slurm"].prefix.bin, "srun")
elif hasattr(spec["mpi"].package, "mpiexec"):
mpiexec = spec["mpi"].package.mpiexec
else:
mpiexec = os.path.join(spec["mpi"].prefix.bin, "mpirun")
if not os.path.exists(mpiexec):
mpiexec = os.path.join(spec["mpi"].prefix.bin, "mpiexec")
if not os.path.exists(mpiexec):
msg = "Unable to determine MPIEXEC, %s tests may fail" % self.pkg.name
entries.append("# {0}\n".format(msg))
tty.warn(msg)
@@ -273,7 +227,10 @@ def initconfig_mpi_entries(self):
entries.append(cmake_cache_path("MPIEXEC", mpiexec))
# Determine MPIEXEC_NUMPROC_FLAG
entries.append(cmake_cache_string("MPIEXEC_NUMPROC_FLAG", self.get_mpi_exec_num_proc()))
if using_slurm:
entries.append(cmake_cache_string("MPIEXEC_NUMPROC_FLAG", "-n"))
else:
entries.append(cmake_cache_string("MPIEXEC_NUMPROC_FLAG", "-np"))
return entries
@@ -316,34 +273,23 @@ def initconfig_hardware_entries(self):
entries.append("# ROCm")
entries.append("#------------------{0}\n".format("-" * 30))
rocm_root = os.path.dirname(spec["llvm-amdgpu"].prefix)
entries.append(cmake_cache_path("ROCM_PATH", rocm_root))
# Explicitly setting HIP_ROOT_DIR may be a patch that is no longer necessary
entries.append(cmake_cache_path("HIP_ROOT_DIR", "{0}".format(spec["hip"].prefix)))
llvm_bin = spec["llvm-amdgpu"].prefix.bin
llvm_prefix = spec["llvm-amdgpu"].prefix
# Some ROCm systems seem to point to /<path>/rocm-<ver>/ and
# others point to /<path>/rocm-<ver>/llvm
if os.path.basename(os.path.normpath(llvm_prefix)) != "llvm":
llvm_bin = os.path.join(llvm_prefix, "llvm/bin/")
entries.append(
cmake_cache_filepath("CMAKE_HIP_COMPILER", os.path.join(llvm_bin, "clang++"))
)
archs = self.spec.variants["amdgpu_target"].value
if archs[0] != "none":
arch_str = ";".join(archs)
entries.append(cmake_cache_string("CMAKE_HIP_ARCHITECTURES", arch_str))
llvm_bin = spec["llvm-amdgpu"].prefix.bin
entries.append(
cmake_cache_filepath("CMAKE_HIP_COMPILER", os.path.join(llvm_bin, "amdclang++"))
)
if spec.satisfies("%gcc"):
entries.append(
cmake_cache_string(
"CMAKE_HIP_FLAGS", f"--gcc-toolchain={self.pkg.compiler.prefix}"
)
)
# Extra definitions that might be required in other cases
if not spec.satisfies("^blt"):
entries.append(cmake_cache_path("HIP_ROOT_DIR", "{0}".format(spec["hip"].prefix)))
if archs[0] != "none":
arch_str = ";".join(archs)
entries.append(cmake_cache_string("AMDGPU_TARGETS", arch_str))
entries.append(cmake_cache_string("GPU_TARGETS", arch_str))
entries.append(cmake_cache_string("AMDGPU_TARGETS", arch_str))
entries.append(cmake_cache_string("GPU_TARGETS", arch_str))
return entries
@@ -375,9 +321,7 @@ def initconfig_package_entries(self):
"""This method is to be overwritten by the package"""
return []
def initconfig(
self, pkg: "CachedCMakePackage", spec: spack.spec.Spec, prefix: spack.util.prefix.Prefix
) -> None:
def initconfig(self, pkg, spec, prefix):
cache_entries = (
self.std_initconfig_entries()
+ self.initconfig_compiler_entries()

View File

@@ -7,9 +7,6 @@
import spack.builder
import spack.package_base
import spack.phase_callbacks
import spack.spec
import spack.util.environment
import spack.util.prefix
from spack.directives import build_system, depends_on
from spack.multimethod import when
@@ -71,39 +68,25 @@ def build_directory(self):
"""Return the directory containing the main Cargo.toml."""
return self.pkg.stage.source_path
@property
def std_build_args(self):
"""Standard arguments for ``cargo build`` provided as a property for
convenience of package writers."""
return ["-j", str(self.pkg.module.make_jobs)]
@property
def build_args(self):
"""Arguments for ``cargo build``."""
return []
return ["-j", str(self.pkg.module.make_jobs)]
@property
def check_args(self):
"""Argument for ``cargo test`` during check phase"""
return []
def setup_build_environment(
self, env: spack.util.environment.EnvironmentModifications
) -> None:
def setup_build_environment(self, env):
env.set("CARGO_HOME", self.stage.path)
def build(
self, pkg: CargoPackage, spec: spack.spec.Spec, prefix: spack.util.prefix.Prefix
) -> None:
def build(self, pkg, spec, prefix):
"""Runs ``cargo install`` in the source directory"""
with fs.working_dir(self.build_directory):
pkg.module.cargo(
"install", "--root", "out", "--path", ".", *self.std_build_args, *self.build_args
)
pkg.module.cargo("install", "--root", "out", "--path", ".", *self.build_args)
def install(
self, pkg: CargoPackage, spec: spack.spec.Spec, prefix: spack.util.prefix.Prefix
) -> None:
def install(self, pkg, spec, prefix):
"""Copy build files into package prefix."""
with fs.working_dir(self.build_directory):
fs.install_tree("out", prefix)

View File

@@ -11,7 +11,6 @@
from typing import Any, List, Optional, Tuple
import llnl.util.filesystem as fs
from llnl.util import tty
from llnl.util.lang import stable_partition
import spack.builder
@@ -455,27 +454,18 @@ def cmake_args(self) -> List[str]:
return []
def cmake(
self, pkg: CMakePackage, spec: spack.spec.Spec, prefix: spack.util.prefix.Prefix
self,
pkg: spack.package_base.PackageBase,
spec: spack.spec.Spec,
prefix: spack.util.prefix.Prefix,
) -> None:
"""Runs ``cmake`` in the build directory"""
if spec.is_develop:
# skip cmake phase if it is an incremental develop build
# Determine the files that will re-run CMake that are generated from a successful
# configure step based on state
primary_generator = _extract_primary_generator(self.generator)
configure_artifact = "Makefile"
if primary_generator == "Ninja":
configure_artifact = "ninja.build"
if os.path.isfile(os.path.join(self.build_directory, configure_artifact)):
tty.msg(
"Incremental build criteria satisfied."
"Skipping CMake configure step. To force configuration run"
f" `spack clean {pkg.name}`"
)
return
# skip cmake phase if it is an incremental develop build
if spec.is_develop and os.path.isfile(
os.path.join(self.build_directory, "CMakeCache.txt")
):
return
options = self.std_cmake_args
options += self.cmake_args()
@@ -484,7 +474,10 @@ def cmake(
pkg.module.cmake(*options)
def build(
self, pkg: CMakePackage, spec: spack.spec.Spec, prefix: spack.util.prefix.Prefix
self,
pkg: spack.package_base.PackageBase,
spec: spack.spec.Spec,
prefix: spack.util.prefix.Prefix,
) -> None:
"""Make the build targets"""
with fs.working_dir(self.build_directory):
@@ -495,7 +488,10 @@ def build(
pkg.module.ninja(*self.build_targets)
def install(
self, pkg: CMakePackage, spec: spack.spec.Spec, prefix: spack.util.prefix.Prefix
self,
pkg: spack.package_base.PackageBase,
spec: spack.spec.Spec,
prefix: spack.util.prefix.Prefix,
) -> None:
"""Make the install targets"""
with fs.working_dir(self.build_directory):

View File

@@ -36,7 +36,7 @@ class CompilerPackage(spack.package_base.PackageBase):
#: Compiler argument(s) that produces version information
#: If multiple arguments, the earlier arguments must produce errors when invalid
compiler_version_argument: Union[str, Tuple[str, ...]] = "-dumpversion"
compiler_version_argument: Union[str, Tuple[str]] = "-dumpversion"
#: Regex used to extract version from compiler's output
compiler_version_regex: str = "(.*)"
@@ -45,12 +45,7 @@ class CompilerPackage(spack.package_base.PackageBase):
compiler_languages: Sequence[str] = ["c", "cxx", "fortran"]
#: Relative path to compiler wrappers
compiler_wrapper_link_paths: Dict[str, str] = {}
#: Optimization flags
opt_flags: Sequence[str] = []
#: Flags for generating debug information
debug_flags: Sequence[str] = []
link_paths: Dict[str, str] = {}
def __init__(self, spec: "spack.spec.Spec"):
super().__init__(spec)
@@ -164,7 +159,7 @@ def determine_variants(cls, exes: Sequence[Path], version_str: str) -> Tuple:
#: Flag to activate OpenMP support
openmp_flag: str = "-fopenmp"
implicit_rpath_libs: List[str] = []
required_libs: List[str] = []
def standard_flag(self, *, language: str, standard: str) -> str:
"""Returns the flag used to enforce a given standard for a language"""
@@ -253,7 +248,7 @@ def compiler_output(
# not just executable name. If we don't do this, and the path changes
# (e.g., during testing), we can get incorrect results.
if not os.path.isabs(compiler_path):
compiler_path = spack.util.executable.which_string(str(compiler_path), required=True)
compiler_path = spack.util.executable.which_string(compiler_path, required=True)
return _compiler_output(
compiler_path, version_argument=version_argument, ignore_errors=ignore_errors

View File

@@ -15,7 +15,7 @@ class CudaPackage(PackageBase):
"""Auxiliary class which contains CUDA variant, dependencies and conflicts
and is meant to unify and facilitate its usage.
Maintainers: ax3l, Rombur, davidbeckingsale, pauleonix
Maintainers: ax3l, Rombur, davidbeckingsale
"""
# https://docs.nvidia.com/cuda/cuda-compiler-driver-nvcc/index.html#gpu-feature-list
@@ -47,12 +47,6 @@ class CudaPackage(PackageBase):
"89",
"90",
"90a",
"100",
"100a",
"101",
"101a",
"120",
"120a",
)
# FIXME: keep cuda and cuda_arch separate to make usage easier until
@@ -105,56 +99,39 @@ def compute_capabilities(arch_list: Iterable[str]) -> List[str]:
# CUDA version vs Architecture
# https://en.wikipedia.org/wiki/CUDA#GPUs_supported
# https://docs.nvidia.com/cuda/cuda-toolkit-release-notes/index.html#deprecated-features
# Tesla support:
depends_on("cuda@:6.0", when="cuda_arch=10")
depends_on("cuda@:6.5", when="cuda_arch=11")
depends_on("cuda@2.1:6.5", when="cuda_arch=12")
depends_on("cuda@2.1:6.5", when="cuda_arch=13")
# Fermi support:
depends_on("cuda@3.0:8.0", when="cuda_arch=20")
depends_on("cuda@3.2:8.0", when="cuda_arch=21")
# Kepler support:
depends_on("cuda@5.0:10.2", when="cuda_arch=30")
depends_on("cuda@5.0:10.2", when="cuda_arch=32")
depends_on("cuda@5.0:11.8", when="cuda_arch=35")
depends_on("cuda@6.5:11.8", when="cuda_arch=37")
# Maxwell support:
depends_on("cuda@6.0:", when="cuda_arch=50")
depends_on("cuda@6.5:", when="cuda_arch=52")
depends_on("cuda@6.5:", when="cuda_arch=53")
# Pascal support:
depends_on("cuda@8.0:", when="cuda_arch=60")
depends_on("cuda@8.0:", when="cuda_arch=61")
depends_on("cuda@8.0:", when="cuda_arch=62")
# Volta support:
depends_on("cuda@9.0:", when="cuda_arch=70")
# Turing support:
depends_on("cuda@9.0:", when="cuda_arch=72")
depends_on("cuda@10.0:", when="cuda_arch=75")
# Ampere support:
depends_on("cuda@11.0:", when="cuda_arch=80")
depends_on("cuda@11.1:", when="cuda_arch=86")
depends_on("cuda@11.4:", when="cuda_arch=87")
# Ada support:
depends_on("cuda@11.8:", when="cuda_arch=89")
# Hopper support:
depends_on("cuda@12.0:", when="cuda_arch=90")
depends_on("cuda@12.0:", when="cuda_arch=90a")
# Blackwell support:
depends_on("cuda@12.8:", when="cuda_arch=100")
depends_on("cuda@12.8:", when="cuda_arch=100a")
depends_on("cuda@12.8:", when="cuda_arch=101")
depends_on("cuda@12.8:", when="cuda_arch=101a")
depends_on("cuda@12.8:", when="cuda_arch=120")
depends_on("cuda@12.8:", when="cuda_arch=120a")
# From the NVIDIA install guide we know of conflicts for particular
# platforms (linux, darwin), architectures (x86, powerpc) and compilers
# (gcc, clang). We don't restrict %gcc and %clang conflicts to
@@ -186,7 +163,6 @@ def compute_capabilities(arch_list: Iterable[str]) -> List[str]:
conflicts("%gcc@12:", when="+cuda ^cuda@:11.8")
conflicts("%gcc@13:", when="+cuda ^cuda@:12.3")
conflicts("%gcc@14:", when="+cuda ^cuda@:12.6")
conflicts("%gcc@15:", when="+cuda ^cuda@:12.8")
conflicts("%clang@12:", when="+cuda ^cuda@:11.4.0")
conflicts("%clang@13:", when="+cuda ^cuda@:11.5")
conflicts("%clang@14:", when="+cuda ^cuda@:11.7")
@@ -195,7 +171,6 @@ def compute_capabilities(arch_list: Iterable[str]) -> List[str]:
conflicts("%clang@17:", when="+cuda ^cuda@:12.3")
conflicts("%clang@18:", when="+cuda ^cuda@:12.5")
conflicts("%clang@19:", when="+cuda ^cuda@:12.6")
conflicts("%clang@20:", when="+cuda ^cuda@:12.8")
# https://gist.github.com/ax3l/9489132#gistcomment-3860114
conflicts("%gcc@10", when="+cuda ^cuda@:11.4.0")

View File

@@ -7,8 +7,6 @@
import spack.directives
import spack.package_base
import spack.phase_callbacks
import spack.spec
import spack.util.prefix
from ._checks import BuilderWithDefaults, apply_macos_rpath_fixups, execute_install_time_tests
@@ -50,8 +48,3 @@ class GenericBuilder(BuilderWithDefaults):
# unconditionally perform any post-install phase tests
spack.phase_callbacks.run_after("install")(execute_install_time_tests)
def install(
self, pkg: Package, spec: spack.spec.Spec, prefix: spack.util.prefix.Prefix
) -> None:
raise NotImplementedError

View File

@@ -7,10 +7,7 @@
import spack.builder
import spack.package_base
import spack.phase_callbacks
import spack.spec
import spack.util.environment
import spack.util.prefix
from spack.directives import build_system, depends_on
from spack.directives import build_system, extends
from spack.multimethod import when
from ._checks import BuilderWithDefaults, execute_install_time_tests
@@ -29,7 +26,9 @@ class GoPackage(spack.package_base.PackageBase):
build_system("go")
with when("build_system=go"):
depends_on("go", type="build")
# TODO: this seems like it should be depends_on, see
# setup_dependent_build_environment in go for why I kept it like this
extends("go@1.14:", type="build")
@spack.builder.builder("go")
@@ -69,12 +68,9 @@ class GoBuilder(BuilderWithDefaults):
#: Callback names for install-time test
install_time_test_callbacks = ["check"]
def setup_build_environment(
self, env: spack.util.environment.EnvironmentModifications
) -> None:
def setup_build_environment(self, env):
env.set("GO111MODULE", "on")
env.set("GOTOOLCHAIN", "local")
env.set("GOPATH", fs.join_path(self.pkg.stage.path, "go"))
@property
def build_directory(self):
@@ -85,31 +81,19 @@ def build_directory(self):
def build_args(self):
"""Arguments for ``go build``."""
# Pass ldflags -s = --strip-all and -w = --no-warnings by default
return [
"-p",
str(self.pkg.module.make_jobs),
"-modcacherw",
"-ldflags",
"-s -w",
"-o",
f"{self.pkg.name}",
]
return ["-modcacherw", "-ldflags", "-s -w", "-o", f"{self.pkg.name}"]
@property
def check_args(self):
"""Argument for ``go test`` during check phase"""
return []
def build(
self, pkg: GoPackage, spec: spack.spec.Spec, prefix: spack.util.prefix.Prefix
) -> None:
def build(self, pkg, spec, prefix):
"""Runs ``go build`` in the source directory"""
with fs.working_dir(self.build_directory):
pkg.module.go("build", *self.build_args)
def install(
self, pkg: GoPackage, spec: spack.spec.Spec, prefix: spack.util.prefix.Prefix
) -> None:
def install(self, pkg, spec, prefix):
"""Install built binaries into prefix bin."""
with fs.working_dir(self.build_directory):
fs.mkdirp(prefix.bin)

View File

@@ -23,7 +23,6 @@
import spack.error
import spack.phase_callbacks
import spack.spec
from spack.build_environment import dso_suffix
from spack.error import InstallError
from spack.util.environment import EnvironmentModifications
@@ -1017,7 +1016,7 @@ def libs(self):
debug_print(result)
return result
def setup_run_environment(self, env: EnvironmentModifications) -> None:
def setup_run_environment(self, env):
"""Adds environment variables to the generated module file.
These environment variables come from running:
@@ -1050,13 +1049,11 @@ def setup_run_environment(self, env: EnvironmentModifications) -> None:
env.set("F77", self.prefix.bin.ifort)
env.set("F90", self.prefix.bin.ifort)
def setup_dependent_build_environment(
self, env: EnvironmentModifications, dependent_spec: spack.spec.Spec
) -> None:
def setup_dependent_build_environment(self, env, dependent_spec):
# NB: This function is overwritten by 'mpi' provider packages:
#
# var/spack/repos/spack_repo/builtin/packages/intel_mpi/package.py
# var/spack/repos/spack_repo/builtin/packages/intel_parallel_studio/package.py
# var/spack/repos/builtin/packages/intel-mpi/package.py
# var/spack/repos/builtin/packages/intel-parallel-studio/package.py
#
# They call _setup_dependent_env_callback() as well, but with the
# dictionary kwarg compilers_of_client{} present and populated.
@@ -1064,12 +1061,7 @@ def setup_dependent_build_environment(
# Handle everything in a callback version.
self._setup_dependent_env_callback(env, dependent_spec)
def _setup_dependent_env_callback(
self,
env: EnvironmentModifications,
dependent_spec: spack.spec.Spec,
compilers_of_client={},
) -> None:
def _setup_dependent_env_callback(self, env, dependent_spec, compilers_of_client={}):
# Expected to be called from a client's
# setup_dependent_build_environment(),
# with args extended to convey the client's compilers as needed.

View File

@@ -7,10 +7,7 @@
import spack.builder
import spack.package_base
import spack.spec
import spack.util.environment
import spack.util.executable
import spack.util.prefix
from spack.directives import build_system, depends_on, extends
from spack.multimethod import when
@@ -58,9 +55,7 @@ class LuaBuilder(spack.builder.Builder):
#: Names associated with package attributes in the old build-system format
legacy_attributes = ()
def unpack(
self, pkg: LuaPackage, spec: spack.spec.Spec, prefix: spack.util.prefix.Prefix
) -> None:
def unpack(self, pkg, spec, prefix):
if os.path.splitext(pkg.stage.archive_file)[1] == ".rock":
directory = pkg.luarocks("unpack", pkg.stage.archive_file, output=str)
dirlines = directory.split("\n")
@@ -71,16 +66,15 @@ def unpack(
def _generate_tree_line(name, prefix):
return """{{ name = "{name}", root = "{prefix}" }};""".format(name=name, prefix=prefix)
def generate_luarocks_config(
self, pkg: LuaPackage, spec: spack.spec.Spec, prefix: spack.util.prefix.Prefix
) -> None:
def generate_luarocks_config(self, pkg, spec, prefix):
spec = self.pkg.spec
table_entries = []
for d in spec.traverse(deptype=("build", "run")):
if d.package.extends(self.pkg.extendee_spec):
table_entries.append(self._generate_tree_line(d.name, d.prefix))
with open(self._luarocks_config_path(), "w", encoding="utf-8") as config:
path = self._luarocks_config_path()
with open(path, "w", encoding="utf-8") as config:
config.write(
"""
deps_mode="all"
@@ -91,31 +85,26 @@ def generate_luarocks_config(
"\n".join(table_entries)
)
)
return path
def preprocess(
self, pkg: LuaPackage, spec: spack.spec.Spec, prefix: spack.util.prefix.Prefix
) -> None:
def preprocess(self, pkg, spec, prefix):
"""Override this to preprocess source before building with luarocks"""
pass
def luarocks_args(self):
return []
def install(
self, pkg: LuaPackage, spec: spack.spec.Spec, prefix: spack.util.prefix.Prefix
) -> None:
def install(self, pkg, spec, prefix):
rock = "."
specs = find(".", "*.rockspec", recursive=False)
if specs:
rock = specs[0]
rocks_args = self.luarocks_args()
rocks_args.append(rock)
pkg.luarocks("--tree=" + prefix, "make", *rocks_args)
self.pkg.luarocks("--tree=" + prefix, "make", *rocks_args)
def _luarocks_config_path(self):
return os.path.join(self.pkg.stage.source_path, "spack_luarocks.lua")
def setup_build_environment(
self, env: spack.util.environment.EnvironmentModifications
) -> None:
def setup_build_environment(self, env):
env.set("LUAROCKS_CONFIG", self._luarocks_config_path())

View File

@@ -98,20 +98,29 @@ def build_directory(self) -> str:
return self.pkg.stage.source_path
def edit(
self, pkg: MakefilePackage, spec: spack.spec.Spec, prefix: spack.util.prefix.Prefix
self,
pkg: spack.package_base.PackageBase,
spec: spack.spec.Spec,
prefix: spack.util.prefix.Prefix,
) -> None:
"""Edit the Makefile before calling make. The default is a no-op."""
pass
def build(
self, pkg: MakefilePackage, spec: spack.spec.Spec, prefix: spack.util.prefix.Prefix
self,
pkg: spack.package_base.PackageBase,
spec: spack.spec.Spec,
prefix: spack.util.prefix.Prefix,
) -> None:
"""Run "make" on the build targets specified by the builder."""
with fs.working_dir(self.build_directory):
pkg.module.make(*self.build_targets)
def install(
self, pkg: MakefilePackage, spec: spack.spec.Spec, prefix: spack.util.prefix.Prefix
self,
pkg: spack.package_base.PackageBase,
spec: spack.spec.Spec,
prefix: spack.util.prefix.Prefix,
) -> None:
"""Run "make" on the install targets specified by the builder."""
with fs.working_dir(self.build_directory):

View File

@@ -5,8 +5,6 @@
import spack.builder
import spack.package_base
import spack.spec
import spack.util.prefix
from spack.directives import build_system, depends_on
from spack.multimethod import when
from spack.util.executable import which
@@ -60,20 +58,16 @@ def build_args(self):
"""List of args to pass to build phase."""
return []
def build(
self, pkg: MavenPackage, spec: spack.spec.Spec, prefix: spack.util.prefix.Prefix
) -> None:
def build(self, pkg, spec, prefix):
"""Compile code and package into a JAR file."""
with fs.working_dir(self.build_directory):
mvn = which("mvn", required=True)
mvn = which("mvn")
if self.pkg.run_tests:
mvn("verify", *self.build_args())
else:
mvn("package", "-DskipTests", *self.build_args())
def install(
self, pkg: MavenPackage, spec: spack.spec.Spec, prefix: spack.util.prefix.Prefix
) -> None:
def install(self, pkg, spec, prefix):
"""Copy to installation prefix."""
with fs.working_dir(self.build_directory):
fs.install_tree(".", prefix)

View File

@@ -48,9 +48,6 @@ class MesonPackage(spack.package_base.PackageBase):
variant("strip", default=False, description="Strip targets on install")
depends_on("meson", type="build")
depends_on("ninja", type="build")
# Meson uses pkg-config for dependency detection, and this dependency is
# often overlooked by packages that use meson as a build system.
depends_on("pkgconfig", type="build")
# Python detection in meson requires distutils to be importable, but distutils no longer
# exists in Python 3.12. In Spack, we can't use setuptools as distutils replacement,
# because the distutils-precedence.pth startup file that setuptools ships with is not run
@@ -191,7 +188,10 @@ def meson_args(self) -> List[str]:
return []
def meson(
self, pkg: MesonPackage, spec: spack.spec.Spec, prefix: spack.util.prefix.Prefix
self,
pkg: spack.package_base.PackageBase,
spec: spack.spec.Spec,
prefix: spack.util.prefix.Prefix,
) -> None:
"""Run ``meson`` in the build directory"""
options = []
@@ -204,7 +204,10 @@ def meson(
pkg.module.meson(*options)
def build(
self, pkg: MesonPackage, spec: spack.spec.Spec, prefix: spack.util.prefix.Prefix
self,
pkg: spack.package_base.PackageBase,
spec: spack.spec.Spec,
prefix: spack.util.prefix.Prefix,
) -> None:
"""Make the build targets"""
options = ["-v"]
@@ -213,7 +216,10 @@ def build(
pkg.module.ninja(*options)
def install(
self, pkg: MesonPackage, spec: spack.spec.Spec, prefix: spack.util.prefix.Prefix
self,
pkg: spack.package_base.PackageBase,
spec: spack.spec.Spec,
prefix: spack.util.prefix.Prefix,
) -> None:
"""Make the install targets"""
with fs.working_dir(self.build_directory):

View File

@@ -7,8 +7,6 @@
import spack.builder
import spack.package_base
import spack.spec
import spack.util.prefix
from spack.directives import build_system, conflicts
from ._checks import BuilderWithDefaults
@@ -101,9 +99,7 @@ def msbuild_install_args(self):
as `msbuild_args` by default."""
return self.msbuild_args()
def build(
self, pkg: MSBuildPackage, spec: spack.spec.Spec, prefix: spack.util.prefix.Prefix
) -> None:
def build(self, pkg, spec, prefix):
"""Run "msbuild" on the build targets specified by the builder."""
with fs.working_dir(self.build_directory):
pkg.module.msbuild(
@@ -112,9 +108,7 @@ def build(
self.define_targets(*self.build_targets),
)
def install(
self, pkg: MSBuildPackage, spec: spack.spec.Spec, prefix: spack.util.prefix.Prefix
) -> None:
def install(self, pkg, spec, prefix):
"""Run "msbuild" on the install targets specified by the builder.
This is INSTALL by default"""
with fs.working_dir(self.build_directory):

View File

@@ -7,8 +7,6 @@
import spack.builder
import spack.package_base
import spack.spec
import spack.util.prefix
from spack.directives import build_system, conflicts
from ._checks import BuilderWithDefaults
@@ -125,9 +123,7 @@ def nmake_install_args(self):
Individual packages should override to specify NMake args to command line"""
return []
def build(
self, pkg: NMakePackage, spec: spack.spec.Spec, prefix: spack.util.prefix.Prefix
) -> None:
def build(self, pkg, spec, prefix):
"""Run "nmake" on the build targets specified by the builder."""
opts = self.std_nmake_args
opts += self.nmake_args()
@@ -136,9 +132,7 @@ def build(
with fs.working_dir(self.build_directory):
pkg.module.nmake(*opts, *self.build_targets, ignore_quotes=self.ignore_quotes)
def install(
self, pkg: NMakePackage, spec: spack.spec.Spec, prefix: spack.util.prefix.Prefix
) -> None:
def install(self, pkg, spec, prefix):
"""Run "nmake" on the install targets specified by the builder.
This is INSTALL by default"""
opts = self.std_nmake_args

View File

@@ -3,9 +3,6 @@
# SPDX-License-Identifier: (Apache-2.0 OR MIT)
import spack.builder
import spack.package_base
import spack.spec
import spack.util.environment
import spack.util.prefix
from spack.directives import build_system, extends
from spack.multimethod import when
@@ -45,9 +42,7 @@ class OctaveBuilder(BuilderWithDefaults):
#: Names associated with package attributes in the old build-system format
legacy_attributes = ()
def install(
self, pkg: OctavePackage, spec: spack.spec.Spec, prefix: spack.util.prefix.Prefix
) -> None:
def install(self, pkg, spec, prefix):
"""Install the package from the archive file"""
pkg.module.octave(
"--quiet",
@@ -58,9 +53,7 @@ def install(
"pkg prefix %s; pkg install %s" % (prefix, self.pkg.stage.archive_file),
)
def setup_build_environment(
self, env: spack.util.environment.EnvironmentModifications
) -> None:
def setup_build_environment(self, env):
# octave does not like those environment variables to be set:
env.unset("CC")
env.unset("CXX")

View File

@@ -106,8 +106,8 @@ def install_component(self, installer_path):
bash = Executable("bash")
# Installer writes files in ~/intel set HOME so it goes to staging directory
bash.add_default_env("HOME", join_path(self.stage.path, "home"))
# Installer writes files in ~/intel set HOME so it goes to prefix
bash.add_default_env("HOME", self.prefix)
# Installer checks $XDG_RUNTIME_DIR/.bootstrapper_lock_file as well
bash.add_default_env("XDG_RUNTIME_DIR", join_path(self.stage.path, "runtime"))
@@ -132,7 +132,7 @@ def install_component(self, installer_path):
if not isdir(install_dir):
raise RuntimeError("install failed to directory: {0}".format(install_dir))
def setup_run_environment(self, env: EnvironmentModifications) -> None:
def setup_run_environment(self, env):
"""Adds environment variables to the generated module file.
These environment variables come from running:
@@ -311,4 +311,4 @@ def ld_flags(self):
#: Tuple of Intel math libraries, exported to packages
INTEL_MATH_LIBRARIES = ("intel-oneapi-mkl",)
INTEL_MATH_LIBRARIES = ("intel-mkl", "intel-oneapi-mkl", "intel-parallel-studio")

View File

@@ -10,8 +10,6 @@
import spack.builder
import spack.package_base
import spack.phase_callbacks
import spack.spec
import spack.util.prefix
from spack.directives import build_system, depends_on, extends
from spack.install_test import SkipTest, test_part
from spack.multimethod import when
@@ -151,9 +149,7 @@ def configure_args(self):
"""
return []
def configure(
self, pkg: PerlPackage, spec: spack.spec.Spec, prefix: spack.util.prefix.Prefix
) -> None:
def configure(self, pkg, spec, prefix):
"""Run Makefile.PL or Build.PL with arguments consisting of
an appropriate installation base directory followed by the
list returned by :py:meth:`~.PerlBuilder.configure_args`.
@@ -177,9 +173,7 @@ def fix_shebang(self):
repl = "#!/usr/bin/env perl"
filter_file(pattern, repl, "Build", backup=False)
def build(
self, pkg: PerlPackage, spec: spack.spec.Spec, prefix: spack.util.prefix.Prefix
) -> None:
def build(self, pkg, spec, prefix):
"""Builds a Perl package."""
self.build_executable()
@@ -190,8 +184,6 @@ def check(self):
"""Runs built-in tests of a Perl package."""
self.build_executable("test")
def install(
self, pkg: PerlPackage, spec: spack.spec.Spec, prefix: spack.util.prefix.Prefix
) -> None:
def install(self, pkg, spec, prefix):
"""Installs a Perl package."""
self.build_executable("install")

View File

@@ -13,9 +13,9 @@
import archspec
import llnl.util.filesystem as fs
import llnl.util.lang as lang
import llnl.util.tty as tty
from llnl.util.filesystem import HeaderList, LibraryList, join_path
from llnl.util.lang import ClassProperty, classproperty, match_predicate
import spack.builder
import spack.config
@@ -28,7 +28,6 @@
import spack.repo
import spack.spec
import spack.store
import spack.util.prefix
from spack.directives import build_system, depends_on, extends
from spack.error import NoHeadersError, NoLibrariesError
from spack.install_test import test_part
@@ -139,7 +138,7 @@ def view_file_conflicts(self, view, merge_map):
ext_map = view.extensions_layout.extension_map(self.extendee_spec)
namespaces = set(x.package.py_namespace for x in ext_map.values())
namespace_re = r"site-packages/{0}/__init__.py".format(self.py_namespace)
find_namespace = match_predicate(namespace_re)
find_namespace = lang.match_predicate(namespace_re)
if self.py_namespace in namespaces:
conflicts = list(x for x in conflicts if not find_namespace(x))
@@ -206,7 +205,7 @@ def remove_files_from_view(self, view, merge_map):
spec.package.py_namespace for name, spec in ext_map.items() if name != self.name
)
if self.py_namespace in remaining_namespaces:
namespace_init = match_predicate(
namespace_init = lang.match_predicate(
r"site-packages/{0}/__init__.py".format(self.py_namespace)
)
ignore_namespace = True
@@ -264,17 +263,16 @@ def update_external_dependencies(self, extendee_spec=None):
# Ensure architecture information is present
if not python.architecture:
host_platform = spack.platforms.host()
host_os = host_platform.default_operating_system()
host_target = host_platform.default_target()
host_os = host_platform.operating_system("default_os")
host_target = host_platform.target("default_target")
python.architecture = spack.spec.ArchSpec(
(str(host_platform), str(host_os), str(host_target))
)
else:
if not python.architecture.platform:
python.architecture.platform = spack.platforms.host()
platform = spack.platforms.by_name(python.architecture.platform)
if not python.architecture.os:
python.architecture.os = platform.default_operating_system()
python.architecture.os = "default_os"
if not python.architecture.target:
python.architecture.target = archspec.cpu.host().family.name
@@ -324,27 +322,6 @@ def get_external_python_for_prefix(self):
raise StopIteration("No external python could be detected for %s to depend on" % self.spec)
def _homepage(cls: "PythonPackage") -> Optional[str]:
"""Get the homepage from PyPI if available."""
if cls.pypi:
name = cls.pypi.split("/")[0]
return f"https://pypi.org/project/{name}/"
return None
def _url(cls: "PythonPackage") -> Optional[str]:
if cls.pypi:
return f"https://files.pythonhosted.org/packages/source/{cls.pypi[0]}/{cls.pypi}"
return None
def _list_url(cls: "PythonPackage") -> Optional[str]:
if cls.pypi:
name = cls.pypi.split("/")[0]
return f"https://pypi.org/simple/{name}/"
return None
class PythonPackage(PythonExtension):
"""Specialized class for packages that are built using pip."""
@@ -372,9 +349,25 @@ class PythonPackage(PythonExtension):
py_namespace: Optional[str] = None
homepage: ClassProperty[Optional[str]] = classproperty(_homepage)
url: ClassProperty[Optional[str]] = classproperty(_url)
list_url: ClassProperty[Optional[str]] = classproperty(_list_url)
@lang.classproperty
def homepage(cls) -> Optional[str]: # type: ignore[override]
if cls.pypi:
name = cls.pypi.split("/")[0]
return f"https://pypi.org/project/{name}/"
return None
@lang.classproperty
def url(cls) -> Optional[str]:
if cls.pypi:
return f"https://files.pythonhosted.org/packages/source/{cls.pypi[0]}/{cls.pypi}"
return None
@lang.classproperty
def list_url(cls) -> Optional[str]: # type: ignore[override]
if cls.pypi:
name = cls.pypi.split("/")[0]
return f"https://pypi.org/simple/{name}/"
return None
@property
def python_spec(self) -> Spec:

View File

@@ -6,8 +6,6 @@
import spack.builder
import spack.package_base
import spack.phase_callbacks
import spack.spec
import spack.util.prefix
from spack.directives import build_system, depends_on
from ._checks import BuilderWithDefaults, execute_build_time_tests
@@ -29,7 +27,6 @@ class QMakePackage(spack.package_base.PackageBase):
build_system("qmake")
depends_on("qmake", type="build", when="build_system=qmake")
depends_on("gmake", type="build")
@spack.builder.builder("qmake")
@@ -64,23 +61,17 @@ def qmake_args(self):
"""List of arguments passed to qmake."""
return []
def qmake(
self, pkg: QMakePackage, spec: spack.spec.Spec, prefix: spack.util.prefix.Prefix
) -> None:
def qmake(self, pkg, spec, prefix):
"""Run ``qmake`` to configure the project and generate a Makefile."""
with working_dir(self.build_directory):
pkg.module.qmake(*self.qmake_args())
def build(
self, pkg: QMakePackage, spec: spack.spec.Spec, prefix: spack.util.prefix.Prefix
) -> None:
def build(self, pkg, spec, prefix):
"""Make the build targets"""
with working_dir(self.build_directory):
pkg.module.make()
def install(
self, pkg: QMakePackage, spec: spack.spec.Spec, prefix: spack.util.prefix.Prefix
) -> None:
def install(self, pkg, spec, prefix):
"""Make the install targets"""
with working_dir(self.build_directory):
pkg.module.make("install")

View File

@@ -3,8 +3,8 @@
# SPDX-License-Identifier: (Apache-2.0 OR MIT)
from typing import Optional, Tuple
import llnl.util.lang as lang
from llnl.util.filesystem import mkdirp
from llnl.util.lang import ClassProperty, classproperty
from spack.directives import extends
@@ -54,32 +54,6 @@ def install(self, pkg, spec, prefix):
pkg.module.R(*args)
def _homepage(cls: "RPackage") -> Optional[str]:
if cls.cran:
return f"https://cloud.r-project.org/package={cls.cran}"
elif cls.bioc:
return f"https://bioconductor.org/packages/{cls.bioc}"
return None
def _url(cls: "RPackage") -> Optional[str]:
if cls.cran:
return f"https://cloud.r-project.org/src/contrib/{cls.cran}_{str(list(cls.versions)[0])}.tar.gz"
return None
def _list_url(cls: "RPackage") -> Optional[str]:
if cls.cran:
return f"https://cloud.r-project.org/src/contrib/Archive/{cls.cran}/"
return None
def _git(cls: "RPackage") -> Optional[str]:
if cls.bioc:
return f"https://git.bioconductor.org/packages/{cls.bioc}"
return None
class RPackage(Package):
"""Specialized class for packages that are built using R.
@@ -103,7 +77,24 @@ class RPackage(Package):
extends("r")
homepage: ClassProperty[Optional[str]] = classproperty(_homepage)
url: ClassProperty[Optional[str]] = classproperty(_url)
list_url: ClassProperty[Optional[str]] = classproperty(_list_url)
git: ClassProperty[Optional[str]] = classproperty(_git)
@lang.classproperty
def homepage(cls):
if cls.cran:
return f"https://cloud.r-project.org/package={cls.cran}"
elif cls.bioc:
return f"https://bioconductor.org/packages/{cls.bioc}"
@lang.classproperty
def url(cls):
if cls.cran:
return f"https://cloud.r-project.org/src/contrib/{cls.cran}_{str(list(cls.versions)[0])}.tar.gz"
@lang.classproperty
def list_url(cls):
if cls.cran:
return f"https://cloud.r-project.org/src/contrib/Archive/{cls.cran}/"
@property
def git(self):
if self.bioc:
return f"https://git.bioconductor.org/packages/{self.bioc}"

View File

@@ -5,12 +5,10 @@
from typing import Optional, Tuple
import llnl.util.filesystem as fs
import llnl.util.lang as lang
import llnl.util.tty as tty
from llnl.util.lang import ClassProperty, classproperty
import spack.builder
import spack.spec
import spack.util.prefix
from spack.build_environment import SPACK_NO_PARALLEL_MAKE
from spack.config import determine_number_of_jobs
from spack.directives import build_system, extends, maintainers
@@ -19,12 +17,6 @@
from spack.util.executable import Executable, ProcessError
def _homepage(cls: "RacketPackage") -> Optional[str]:
if cls.racket_name:
return f"https://pkgs.racket-lang.org/package/{cls.racket_name}"
return None
class RacketPackage(PackageBase):
"""Specialized class for packages that are built using Racket's
`raco pkg install` and `raco setup` commands.
@@ -43,7 +35,13 @@ class RacketPackage(PackageBase):
extends("racket", when="build_system=racket")
racket_name: Optional[str] = None
homepage: ClassProperty[Optional[str]] = classproperty(_homepage)
parallel = True
@lang.classproperty
def homepage(cls):
if cls.racket_name:
return "https://pkgs.racket-lang.org/package/{0}".format(cls.racket_name)
return None
@spack.builder.builder("racket")
@@ -76,22 +74,18 @@ def build_directory(self):
ret = os.path.join(ret, self.subdirectory)
return ret
def install(
self, pkg: RacketPackage, spec: spack.spec.Spec, prefix: spack.util.prefix.Prefix
) -> None:
def install(self, pkg, spec, prefix):
"""Install everything from build directory."""
raco = Executable("raco")
with fs.working_dir(self.build_directory):
parallel = pkg.parallel and (not env_flag(SPACK_NO_PARALLEL_MAKE))
name = pkg.racket_name
assert name is not None, "Racket package name is not set"
parallel = self.pkg.parallel and (not env_flag(SPACK_NO_PARALLEL_MAKE))
args = [
"pkg",
"install",
"-t",
"dir",
"-n",
name,
self.pkg.racket_name,
"--deps",
"fail",
"--ignore-implies",
@@ -107,7 +101,8 @@ def install(
except ProcessError:
args.insert(-2, "--skip-installed")
raco(*args)
tty.warn(
f"Racket package {name} was already installed, uninstalling via "
msg = (
"Racket package {0} was already installed, uninstalling via "
"Spack may make someone unhappy!"
)
tty.warn(msg.format(self.pkg.racket_name))

View File

@@ -140,7 +140,7 @@ class ROCmPackage(PackageBase):
when="+rocm",
)
depends_on("llvm-amdgpu", type="build", when="+rocm")
depends_on("llvm-amdgpu", when="+rocm")
depends_on("hsa-rocr-dev", when="+rocm")
depends_on("hip +rocm", when="+rocm")

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