# Copyright 2013-2021 Lawrence Livermore National Security, LLC and other
# Spack Project Developers. See the top-level COPYRIGHT file for details.
#
# SPDX-License-Identifier: (Apache-2.0 OR MIT)

from spack import *


class Bamdst(MakefilePackage):
    """Bamdst is a a lightweight bam file depth statistical tool."""

    homepage = "https://github.com/shiquan/bamdst"
    git      = "https://github.com/shiquan/bamdst.git"

    version('master', git='https://github.com/shiquan/bamdst.git')

    depends_on('zlib')

    parallel = False

    def edit(self, spec, prefix):
        makefile = FileFilter('Makefile')
        makefile.filter('CC= .*', 'CC = cc')

    def install(self, spec, prefix):
        mkdir(prefix.bin)
        install('bamdst', prefix.bin)