# Copyright 2013-2018 Lawrence Livermore National Security, LLC and other # Spack Project Developers. See the top-level COPYRIGHT file for details. # # SPDX-License-Identifier: (Apache-2.0 OR MIT) import inspect import os.path from spack import * class Pexsi(MakefilePackage): """The PEXSI library is written in C++, and uses message passing interface (MPI) to parallelize the computation on distributed memory computing systems and achieve scalability on more than 10,000 processors. The Pole EXpansion and Selected Inversion (PEXSI) method is a fast method for electronic structure calculation based on Kohn-Sham density functional theory. It efficiently evaluates certain selected elements of matrix functions, e.g., the Fermi-Dirac function of the KS Hamiltonian, which yields a density matrix. It can be used as an alternative to diagonalization methods for obtaining the density, energy and forces in electronic structure calculations. """ homepage = 'https://math.berkeley.edu/~linlin/pexsi/index.html' url = 'https://math.berkeley.edu/~linlin/pexsi/download/pexsi_v0.9.0.tar.gz' # version('1.0', '4600b03e235935fe623acf500df0edfa') version('0.10.2', '012f6800098671ec39c2ed7b38935e27') version('0.9.2', '0ce491a3a922d271c4edf9b20aa93076') version('0.9.0', '0c1a2de891ba1445dfc184b2fa270ed8') depends_on('parmetis') depends_on('superlu-dist@3.3:3.999', when='@:0.9.0') depends_on('superlu-dist@4.3:4.999', when='@0.9.2') depends_on('superlu-dist@5.1.2:5.3.999', when='@0.10.2:') variant( 'fortran', default=False, description='Builds the Fortran interface' ) parallel = False def edit(self, spec, prefix): substitutions = [ ('@MPICC', self.spec['mpi'].mpicc), ('@MPICXX_LIB', self.spec['mpi:cxx'].libs.joined()), ('@MPICXX', self.spec['mpi'].mpicxx), ('@MPIFC', self.spec['mpi'].mpifc), ('@RANLIB', 'ranlib'), ('@PEXSI_STAGE', self.stage.source_path), ('@SUPERLU_PREFIX', self.spec['superlu-dist'].prefix), ('@METIS_PREFIX', self.spec['metis'].prefix), ('@PARMETIS_PREFIX', self.spec['parmetis'].prefix), ('@LAPACK_PREFIX', self.spec['lapack'].prefix), ('@BLAS_PREFIX', self.spec['blas'].prefix), ('@LAPACK_LIBS', self.spec['lapack'].libs.joined()), ('@BLAS_LIBS', self.spec['blas'].libs.joined()), # FIXME : what to do with compiler provided libraries ? ('@STDCXX_LIB', ' '.join(self.compiler.stdcxx_libs)) ] if '@0.9.2' in self.spec: substitutions.append( ('@FLDFLAGS', '-Wl,--allow-multiple-definition') ) else: substitutions.append( ('@FLDFLAGS', '') ) template = join_path( os.path.dirname(inspect.getmodule(self).__file__), 'make.inc' ) makefile = join_path( self.stage.source_path, 'make.inc' ) copy(template, makefile) for key, value in substitutions: filter_file(key, value, makefile) def build(self, spec, prefix): super(Pexsi, self).build(spec, prefix) if '+fortran' in self.spec: make('-C', 'fortran') def install(self, spec, prefix): # 'make install' does not exist, despite what documentation says mkdirp(self.prefix.lib) install( join_path(self.stage.source_path, 'src', 'libpexsi_linux.a'), join_path(self.prefix.lib, 'libpexsi.a') ) install_tree( join_path(self.stage.source_path, 'include'), self.prefix.include ) # fortran "interface" if '+fortran' in self.spec: install_tree( join_path(self.stage.source_path, 'fortran'), join_path(self.prefix, 'fortran') )