############################################################################## # Copyright (c) 2013-2016, Lawrence Livermore National Security, LLC. # Produced at the Lawrence Livermore National Laboratory. # # This file is part of Spack. # Created by Todd Gamblin, tgamblin@llnl.gov, All rights reserved. # LLNL-CODE-647188 # # For details, see https://github.com/llnl/spack # Please also see the NOTICE and LICENSE files for our notice and the LGPL. # # This program is free software; you can redistribute it and/or modify # it under the terms of the GNU Lesser General Public License (as # published by the Free Software Foundation) version 2.1, February 1999. # # This program is distributed in the hope that it will be useful, but # WITHOUT ANY WARRANTY; without even the IMPLIED WARRANTY OF # MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the terms and # conditions of the GNU Lesser General Public License for more details. # # You should have received a copy of the GNU Lesser General Public # License along with this program; if not, write to the Free Software # Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA ############################################################################## import os from spack import * def _verbs_dir(): """Try to find the directory where the OpenFabrics verbs package is installed. Return None if not found. """ try: # Try to locate Verbs by looking for a utility in the path ibv_devices = which("ibv_devices") # Run it (silently) to ensure it works ibv_devices(output=str, error=str) # Get path to executable path = ibv_devices.exe[0] # Remove executable name and "bin" directory path = os.path.dirname(path) path = os.path.dirname(path) # There's usually no "/include" on Unix; use "/usr/include" instead if path == "/": path = "/usr" return path except TypeError: return None except ProcessError: return None def _mxm_dir(): """Look for default directory where the Mellanox package is installed. Return None if not found. """ # Only using default directory; make this more flexible in the future path = "/opt/mellanox/mxm" if os.path.isdir(path): return path else: return None class Openmpi(AutotoolsPackage): """The Open MPI Project is an open source Message Passing Interface implementation that is developed and maintained by a consortium of academic, research, and industry partners. Open MPI is therefore able to combine the expertise, technologies, and resources from all across the High Performance Computing community in order to build the best MPI library available. Open MPI offers advantages for system and software vendors, application developers and computer science researchers. """ homepage = "http://www.open-mpi.org" url = "https://www.open-mpi.org/software/ompi/v2.1/downloads/openmpi-2.1.1.tar.bz2" list_url = "http://www.open-mpi.org/software/ompi/" # Current version('2.1.1', 'ae542f5cf013943ffbbeb93df883731b') # libmpi.so.20.10.1 version('2.1.0', '4838a5973115c44e14442c01d3f21d52') # libmpi.so.20.10.0 # Still supported version('2.0.3', '6c09e56ac2230c4f9abd8ba029f03edd') # libmpi.so.20.0.3 version('2.0.2', 'ecd99aa436a1ca69ce936a96d6a3fa48') # libmpi.so.20.0.2 version('2.0.1', '6f78155bd7203039d2448390f3b51c96') # libmpi.so.20.0.1 version('2.0.0', 'cdacc800cb4ce690c1f1273cb6366674') # libmpi.so.20.0.0 version('1.10.7', 'c87c613f9acb1a4eee21fa1ac8042579') # libmpi.so.12.0.7 version('1.10.6', '2e65008c1867b1f47c32f9f814d41706') # libmpi.so.12.0.6 version('1.10.5', 'd32ba9530a869d9c1eae930882ea1834') # libmpi.so.12.0.5 version('1.10.4', '9d2375835c5bc5c184ecdeb76c7c78ac') # libmpi.so.12.0.4 version('1.10.3', 'e2fe4513200e2aaa1500b762342c674b') # libmpi.so.12.0.3 version('1.10.2', 'b2f43d9635d2d52826e5ef9feb97fd4c') # libmpi.so.12.0.2 version('1.10.1', 'f0fcd77ed345b7eafb431968124ba16e') # libmpi.so.12.0.1 version('1.10.0', '280cf952de68369cebaca886c5ce0304') # libmpi.so.12.0.0 # Retired version('1.8.8', '0dab8e602372da1425e9242ae37faf8c') # libmpi.so.1.6.3 version('1.8.7', '2485ed6fa0fab9bb5b4e7a9f63718630') # libmpi.so.1.6.2 version('1.8.6', 'eb569e7dc97eeaa5b1876cccf114f377') # libmpi.so.1.6.1 version('1.8.5', '93e958914ff0e4d9634d668d2d48c793') # libmpi.so.1.6.0 version('1.8.4', '93b7ea2c4ebae76947f942579608ae4a') # libmpi.so.1.6.0 version('1.8.3', '2067d00853e0c33d498153fc7d268d2b') # libmpi.so.1.6.0 version('1.8.2', '339a9fc199563bacbb359875ce8c9e20') # libmpi.so.1.5.2 version('1.8.1', '0e12c24a28a605f681ff9a19a1aca2f1') # libmpi.so.1.5.0 version('1.8', '5999cfb177a50c480b5d0bced379aff1') # libmpi.so.1.5.0 version('1.7.5', '321ab81147ac69a5bbca72652fb3b468') # libmpi.so.1.4.0 version('1.7.4', '4aea4fb00f8956dd56ccf50e5784e03f') # libmpi.so.1.3.0 version('1.7.3', '7d0779f73c43eb1d098ad037d60649bc') # libmpi.so.1.2.0 version('1.7.2', 'b897b92100bd13b367e651df483421d5') # libmpi.so.1.1.2 version('1.7.1', 'f25b446a9dcbbd6a105a99d926d34441') # libmpi.so.1.1.1 version('1.7', 'c0e3c4b3bfcd8b8bbd027f6f4c164acb') # libmpi.so.1.1.0 version('1.6.5', '03aed2a4aa4d0b27196962a2a65fc475') # libmpi.so.1.0.8 version('1.6.4', '62119579ab92b2592cd96b6a9d2a8cc3') # libmpi.so.1.0.7 version('1.6.3', 'eedb73155a7a40b0b07718494298fb25') # libmpi.so.1.0.6 version('1.6.2', '219754715a8e40beb468bbc8f0b3251a') # libmpi.so.1.0.3 version('1.6.1', '33d2782c20ff6be79130a703b85da8f0') # libmpi.so.1.0.3 version('1.6', 'dd6f5bd4b3cb14d93bbf530e50e46e60') # libmpi.so.1.0.3 # Ancient version('1.5.5', 'f882fd61ff89db856bfd8f0dfa42e1bd') # libmpi.so.1.0.3 version('1.5.4', '51153d794c49ce6d275dba2793ab0c68') # libmpi.so.1.0.2 version('1.5.3', '0eb8ec2aa05c74a4bc7602b01847131e') # libmpi.so.1.0.1 version('1.5.2', 'faaee6a2777bf607d7fa1297c0b3a9ed') # libmpi.so.1.0.1 version('1.5.1', '3f9409f5d3b617c04dea48ba8fbd703a') # libmpi.so.1.0.0 version('1.5', '86bf5f9ef7337231abbca3350b31f112') # libmpi.so.1.0.0 version('1.4.5', '84ddd2772f46d35da79e1db8a274c99d') # libmpi.so.0.0.4 version('1.4.4', 'e58a1ea7b8af62453aaa0ddaee5f26a0') # libmpi.so.0.0.3 version('1.4.3', 'd2ead141c43b915343f5c5a18f3b5016') # libmpi.so.0.0.2 version('1.4.2', '53b26fa2586aedaf73cf40effbfcc2f3') # libmpi.so.0.0.2 version('1.4.1', '28a820c85e02973809df881fdeddd15e') # libmpi.so.0.0.1 version('1.4', '9786ec0698afed9498ce43dc3978a435') # libmpi.so.0.0.1 version('1.3.4', '978c29f3b671856daa0fc67459b73e01') # libmpi.so.0.0.1 version('1.3.3', 'f6cdc9c195daa8571b2e509e952d6755') # libmpi.so.0.0.0 version('1.3.2', '75781dc31255cd841701c065e239d994') # libmpi.so.0.0.0 version('1.3.1', 'd759523b0752139872c534714d641d64') # libmpi.so.0.0.0 version('1.3', 'efbba7d652d1e430d456f65d7a2e339b') # libmpi.so.0.0.0 version('1.2.9', '78c2aebbb746610ed12bdedcc2b6ec0e') # libmpi.so.0.0.0 version('1.2.8', '7f2d5af02101c5f01173f4f6de296549') # libmpi.so.0.0.0 version('1.2.7', 'b5ae3059fba71eba4a89a2923da8223f') # libmpi.so.0.0.0 version('1.2.6', 'f126793b68e71f5ec4a192c40675af2d') # libmpi.so.0.0.0 version('1.2.5', 'c6e82aab6cdcd425bf29217e8317d7dc') # libmpi.so.0.0.0 version('1.2.4', '311b38c597f54d8d6b277225ef458666') # libmpi.so.0.0.0 version('1.2.3', 'ae980bb00f9686934a1143701cc041e4') # libmpi.so.0.0.0 version('1.2.2', '7f553317e388c4efe479e908b66f910d') # libmpi.so.0.0.0 version('1.2.1', 'ceaa42891edba2324a94fdd0b87e46ca') # libmpi.so.0.0.0 version('1.2', '37e8d4edad54a8d8c3127fbef87ebda1') # libmpi.so.0.0.0 version('1.1.5', '6aada92896a1830ece6d3ba1e66a17fa') # libmpi.so.0.0.0 version('1.1.4', '28940b182156478fa442397b0c9660e1') # libmpi.so.0.0.0 version('1.1.3', 'bbaa7fe9d556212d877d872544a31569') # libmpi.so.0.0.0 version('1.1.2', '53877ec8bca5f6e505496b6b94b1d850') # libmpi.so.0.0.0 version('1.1.1', '498b9322ae0ad512026a008a30c7e0b5') # libmpi.so.0.0.0 version('1.1', '821af8bbb7a8e85ec707cb4c3b6bcbf6') # libmpi.so.0.0.0 version('1.0.2', 'fd32861d643f9fe539a01d0d5b836f41') # libmpi.so.0.0.0 version('1.0.1', '8abccca5cdddc81a6d9d9e22b3bb6db9') # libmpi.so.0.0.0 version('1.0', 'f5dcb5d3a98f2e5a9c2a0caaef54d806') # libmpi.so.0.0.0 patch('ad_lustre_rwcontig_open_source.patch', when="@1.6.5") patch('llnl-platforms.patch', when="@1.6.5") patch('configure.patch', when="@1.10.1") patch('fix_multidef_pmi_class.patch', when="@2.0.0:2.0.1") variant( 'fabrics', default=None if _verbs_dir() is None else 'verbs', description='List of fabrics that are enabled', values=('psm', 'psm2', 'pmi', 'verbs', 'mxm'), multi=True ) variant( 'schedulers', description='List of schedulers for which support is enabled', values=('alps', 'lsf', 'tm', 'slurm', 'sge', 'loadleveler'), multi=True ) # Additional support options variant('java', default=False, description='Build Java support') variant('sqlite3', default=False, description='Build SQLite3 support') variant('vt', default=True, description='Build VampirTrace support') variant('thread_multiple', default=False, description='Enable MPI_THREAD_MULTIPLE support') variant('cuda', default=False, description='Enable CUDA support') provides('mpi') provides('mpi@:2.2', when='@1.6.5') provides('mpi@:3.0', when='@1.7.5:') provides('mpi@:3.1', when='@2.0.0:') depends_on('hwloc') depends_on('hwloc +cuda', when='+cuda') depends_on('jdk', when='+java') depends_on('sqlite', when='+sqlite3@:1.11') conflicts('+cuda', when='@:1.6') # CUDA support was added in 1.7 conflicts('fabrics=psm2', when='@:1.8') # PSM2 support was added in 1.10.0 conflicts('fabrics=pmi', when='@:1.5.4') # PMI support was added in 1.5.5 conflicts('fabrics=mxm', when='@:1.5.3') # MXM support was added in 1.5.4 def url_for_version(self, version): url = "http://www.open-mpi.org/software/ompi/v{0}/downloads/openmpi-{1}.tar.bz2" return url.format(version.up_to(2), version) @property def libs(self): query_parameters = self.spec.last_query.extra_parameters libraries = ['libmpi'] if 'cxx' in query_parameters: libraries = ['libmpi_cxx'] + libraries return find_libraries( libraries, root=self.prefix, shared=True, recurse=True ) def setup_dependent_environment(self, spack_env, run_env, dependent_spec): spack_env.set('MPICC', join_path(self.prefix.bin, 'mpicc')) spack_env.set('MPICXX', join_path(self.prefix.bin, 'mpic++')) spack_env.set('MPIF77', join_path(self.prefix.bin, 'mpif77')) spack_env.set('MPIF90', join_path(self.prefix.bin, 'mpif90')) spack_env.set('OMPI_CC', spack_cc) spack_env.set('OMPI_CXX', spack_cxx) spack_env.set('OMPI_FC', spack_fc) spack_env.set('OMPI_F77', spack_f77) def setup_dependent_package(self, module, dependent_spec): self.spec.mpicc = join_path(self.prefix.bin, 'mpicc') self.spec.mpicxx = join_path(self.prefix.bin, 'mpic++') self.spec.mpifc = join_path(self.prefix.bin, 'mpif90') self.spec.mpif77 = join_path(self.prefix.bin, 'mpif77') self.spec.mpicxx_shared_libs = [ join_path(self.prefix.lib, 'libmpi_cxx.{0}'.format(dso_suffix)), join_path(self.prefix.lib, 'libmpi.{0}'.format(dso_suffix)) ] def with_or_without_verbs(self, activated): # Up through version 1.6, this option was previously named # --with-openib opt = 'openib' # In version 1.7, it was renamed to be --with-verbs if self.spec.satisfies('@1.7:'): opt = 'verbs' # If the option has not been activated return # --without-openib or --without-verbs if not activated: return '--without-{0}'.format(opt) line = '--with-{0}'.format(opt) path = _verbs_dir() if (path is not None) and (path not in ('/usr', '/usr/local')): line += '={0}'.format(path) return line def with_or_without_mxm(self, activated): opt = 'mxm' # If the option has not been activated return --without-mxm if not activated: return '--without-{0}'.format(opt) line = '--with-{0}'.format(opt) path = _mxm_dir() if (path is not None): line += '={0}'.format(path) return line @run_before('autoreconf') def die_without_fortran(self): # Until we can pass variants such as +fortran through virtual # dependencies depends_on('mpi'), require Fortran compiler to # avoid delayed build errors in dependents. if (self.compiler.f77 is None) or (self.compiler.fc is None): raise InstallError( 'OpenMPI requires both C and Fortran compilers!' ) def configure_args(self): spec = self.spec config_args = [ '--enable-shared', '--enable-static' ] if self.spec.satisfies('@2.0:'): # for Open-MPI 2.0:, C++ bindings are disabled by default. config_args.extend(['--enable-mpi-cxx']) # Fabrics and schedulers config_args.extend(self.with_or_without('fabrics')) config_args.extend(self.with_or_without('schedulers')) # Hwloc support if spec.satisfies('@1.5.2:'): config_args.append('--with-hwloc={0}'.format(spec['hwloc'].prefix)) # Java support if spec.satisfies('@1.7.4:'): if '+java' in spec: config_args.extend([ '--enable-java', '--enable-mpi-java', '--with-jdk-dir={0}'.format(spec['jdk'].prefix) ]) else: config_args.extend([ '--disable-java', '--disable-mpi-java' ]) # SQLite3 support if spec.satisfies('@1.7.3:1.999'): if '+sqlite3' in spec: config_args.append('--with-sqlite3') else: config_args.append('--without-sqlite3') # VampirTrace support if spec.satisfies('@1.3:1.999'): if '+vt' not in spec: config_args.append('--enable-contrib-no-build=vt') # Multithreading support if spec.satisfies('@1.5.4:'): if '+thread_multiple' in spec: config_args.append('--enable-mpi-thread-multiple') else: config_args.append('--disable-mpi-thread-multiple') # CUDA support # See https://www.open-mpi.org/faq/?category=buildcuda if spec.satisfies('@1.7:'): if '+cuda' in spec: # OpenMPI dynamically loads libcuda.so, requires dlopen config_args.append('--enable-dlopen') # Searches for header files in DIR/include config_args.append('--with-cuda={0}'.format( spec['cuda'].prefix)) if spec.satisfies('@1.7:1.7.2'): # This option was removed from later versions config_args.append('--with-cuda-libdir={0}'.format( spec['cuda'].libs.directories[0])) if spec.satisfies('@1.7.2'): # There was a bug in 1.7.2 when --enable-static is used config_args.append('--enable-mca-no-build=pml-bfo') if spec.satisfies('%pgi^cuda@7.0:7.999'): # OpenMPI has problems with CUDA 7 and PGI config_args.append( '--with-wrapper-cflags=-D__LP64__ -ta:tesla') if spec.satisfies('%pgi@:15.8'): # With PGI 15.9 and later compilers, the # CFLAGS=-D__LP64__ is no longer needed. config_args.append('CFLAGS=-D__LP64__') else: config_args.append('--without-cuda') return config_args @run_after('install') def filter_compilers(self): """Run after install to make the MPI compilers use the compilers that Spack built the package with. If this isn't done, they'll have CC, CXX and FC set to Spack's generic cc, c++ and f90. We want them to be bound to whatever compiler they were built with. """ kwargs = {'ignore_absent': True, 'backup': False, 'string': False} wrapper_basepath = join_path(self.prefix, 'share', 'openmpi') wrappers = [ ('mpicc-vt-wrapper-data.txt', self.compiler.cc), ('mpicc-wrapper-data.txt', self.compiler.cc), ('ortecc-wrapper-data.txt', self.compiler.cc), ('shmemcc-wrapper-data.txt', self.compiler.cc), ('mpic++-vt-wrapper-data.txt', self.compiler.cxx), ('mpic++-wrapper-data.txt', self.compiler.cxx), ('ortec++-wrapper-data.txt', self.compiler.cxx), ('mpifort-vt-wrapper-data.txt', self.compiler.fc), ('mpifort-wrapper-data.txt', self.compiler.fc), ('shmemfort-wrapper-data.txt', self.compiler.fc), ('mpif90-vt-wrapper-data.txt', self.compiler.fc), ('mpif90-wrapper-data.txt', self.compiler.fc), ('mpif77-vt-wrapper-data.txt', self.compiler.f77), ('mpif77-wrapper-data.txt', self.compiler.f77) ] for wrapper_name, compiler in wrappers: wrapper = join_path(wrapper_basepath, wrapper_name) if not os.path.islink(wrapper): # Substitute Spack compile wrappers for the real # underlying compiler match = 'compiler=.*' substitute = 'compiler={compiler}'.format(compiler=compiler) filter_file(match, substitute, wrapper, **kwargs) # Remove this linking flag if present # (it turns RPATH into RUNPATH) filter_file('-Wl,--enable-new-dtags', '', wrapper, **kwargs)