25 lines
908 B
Python
25 lines
908 B
Python
# Copyright 2013-2022 Lawrence Livermore National Security, LLC and other
|
|
# Spack Project Developers. See the top-level COPYRIGHT file for details.
|
|
#
|
|
# SPDX-License-Identifier: (Apache-2.0 OR MIT)
|
|
|
|
from spack.package import *
|
|
from spack.pkg.builtin.boost import Boost
|
|
|
|
|
|
class Sailfish(CMakePackage):
|
|
"""Sailfish is a tool for transcript quantification from RNA-seq data."""
|
|
|
|
homepage = "https://www.cs.cmu.edu/~ckingsf/software/sailfish"
|
|
url = "https://github.com/kingsfordgroup/sailfish/archive/v0.10.1.tar.gz"
|
|
|
|
version("0.10.1", sha256="a0d6d944382f2e07ffbfd0371132588e2f22bb846ecfc3d3435ff3d81b30d6c6")
|
|
|
|
depends_on("boost@1.55:")
|
|
|
|
# TODO: replace this with an explicit list of components of Boost,
|
|
# for instance depends_on('boost +filesystem')
|
|
# See https://github.com/spack/spack/pull/22303 for reference
|
|
depends_on(Boost.with_default_variants)
|
|
depends_on("tbb")
|