spack

History

Michael Kuhn 12fb1cdbe5 Replace pkg-config dependencies with virtual (#8783 ) Several packages specified pkg-config as a dependency, which is a specific implementation of the pkgconfig virtual. Most packages do not request a specific implementation. The current concretizer may choose a different implentation of pkgconfig for the nonspecific dependents, which conflicts with the request for pkg-config. This replaces all requests for a specific implementation of pkgconfig with the virtual package as a temporary solution to the issue.		2018-08-02 13:29:04 -04:00
..
abinit	abinit: added version 8.8.2 (#8294 )	2018-05-28 08:11:43 -05:00
abyss	Fix digest for abyss@1.5.2 (#8341 )	2018-06-01 15:06:45 -05:00
accfft	Add top-level attributes for hg, svn, and git A-L packages	2018-07-25 23:10:10 -07:00
ack
activeharmony
adept-utils
adios	Add top-level attributes for hg, svn, and git A-L packages	2018-07-25 23:10:10 -07:00
adios2	adios2: add 2.2.0 (#8871 )	2018-08-02 11:16:17 -05:00
adlbx
adol-c	Add top-level attributes for hg, svn, and git A-L packages	2018-07-25 23:10:10 -07:00
aegean	Aegean: new package (#8113 )	2018-05-14 11:10:19 -05:00
albany	Add top-level attributes for hg, svn, and git A-L packages	2018-07-25 23:10:10 -07:00
albert
alglib
allinea-forge
allinea-reports
allpaths-lg
alquimia	Add top-level attributes for hg, svn, and git A-L packages	2018-07-25 23:10:10 -07:00
alsa-lib
amg	All git URLs end in .git	2018-07-25 23:10:10 -07:00
amg2013
amp	Add top-level attributes for hg, svn, and git A-L packages	2018-07-25 23:10:10 -07:00
ampliconnoise
amrex	AMReX: update package.py (#8697 )	2018-07-26 13:29:03 -05:00
amrvis	Add top-level attributes for hg, svn, and git A-L packages	2018-07-25 23:10:10 -07:00
andi
angsd
ant
antlr	antlr: Turn off CSharp (#8157 )	2018-05-18 10:39:30 -07:00
ants
ape
apex
applewmproto
appres
apr
apr-util
aragorn	ARAGORN: Create new package (#7875 )	2018-04-23 16:51:42 -05:00
archer
argp-standalone
argtable
arlecore
armadillo
arpack-ng	Add top-level attributes for hg, svn, and git A-L packages	2018-07-25 23:10:10 -07:00
arrow	Parquet: new packages (#8601 )	2018-07-04 07:24:38 -05:00
ascent	Add top-level attributes for hg, svn, and git A-L packages	2018-07-25 23:10:10 -07:00
asciidoc
aspa	Add top-level attributes for hg, svn, and git A-L packages	2018-07-25 23:10:10 -07:00
aspcud
aspect	Add top-level attributes for hg, svn, and git A-L packages	2018-07-25 23:10:10 -07:00
aspell	views: packages can customize how they're added to views (#7152 )	2018-06-26 16:14:05 -07:00
aspell6-de
aspell6-en
aspell6-es
aspera-cli	aspera-cli: a new package. (#8715 )	2018-07-16 13:53:23 -05:00
assimp	Further improvements to version parsing	2018-07-25 23:10:10 -07:00
astra
astral
astyle	astyle: add 3.1 (#8137 )	2018-05-15 09:43:27 -05:00
atk
atlas
atom-dft
atompaw
atop
augustus	Augustus updated to version 3.3.1 (#8588 )	2018-07-22 17:11:37 -05:00
autoconf
autodock-vina
autogen
automaded
automake	Added the latest versions of a few packages (#7910 )	2018-04-26 14:46:45 +02:00
axel	A new package: axel. (#8434 )	2018-06-10 15:16:16 -05:00
axl	Add top-level attributes for hg, svn, and git A-L packages	2018-07-25 23:10:10 -07:00
bamtools
bamutil
barrnap
bash
bash-completion	Replace git=git with explicit branch names	2018-07-25 23:10:10 -07:00
bats
bazel	Add latest versions of bazel (#8250 )	2018-05-23 07:27:45 -05:00
bbcp	Add top-level attributes for hg, svn, and git A-L packages	2018-07-25 23:10:10 -07:00
bbmap
bc
bcftools	Bump samtools, hstlib and bcftools to version 1.8. (#8020 )	2018-05-04 16:27:54 -05:00
bcl2fastq2	bcl2fastq2: package update (#7794 )	2018-04-18 10:11:44 -05:00
bdftopcf
bdw-gc
bear
beast1	beast1: add libbeagle support (#8525 )	2018-07-22 17:17:03 -05:00
beast2
bedops	Add info for bedops@v2.4.35 (#8310 )	2018-05-29 14:46:42 -05:00
bedtools2
beforelight
benchmark	Add top-level attributes for hg, svn, and git A-L packages	2018-07-25 23:10:10 -07:00
berkeley-db
bertini
bib2xhtml
bigreqsproto
binutils
bioawk
biopieces	Add top-level attributes for hg, svn, and git A-L packages	2018-07-25 23:10:10 -07:00
bismark	bismark: Create new package (#7795 )	2018-04-17 14:45:10 -05:00
bison	style: make core comply with pep8-naming	2018-07-19 00:41:36 -07:00
bitmap
blasr	blasr: new package (#8367 )	2018-07-07 10:05:57 -05:00
blasr-libcpp	blasr-libcpp: new package (#8366 )	2018-06-13 08:55:31 -05:00
blast-plus
blat
blaze
bliss
blitz
bmake	Add bmake 20180512 (#8221 )	2018-05-21 15:58:11 -05:00
bml	Add top-level attributes for hg, svn, and git A-L packages	2018-07-25 23:10:10 -07:00
bohrium	Further improvements to version parsing	2018-07-25 23:10:10 -07:00
bookleaf-cpp	Add top-level attributes for hg, svn, and git A-L packages	2018-07-25 23:10:10 -07:00
boost	Add top-level attributes for hg, svn, and git A-L packages	2018-07-25 23:10:10 -07:00
boostmplcartesianproduct
bowtie
bowtie2
boxlib	Correcting position independent code setting for boxlib and amrex. (#8537 )	2018-06-21 16:37:10 -05:00
bpp-core
bpp-phyl
bpp-seq
bpp-suite
bracken
braker
branson	All git URLs end in .git	2018-07-25 23:10:10 -07:00
breakdancer	Add top-level attributes for hg, svn, and git A-L packages	2018-07-25 23:10:10 -07:00
breseq
brigand	Add top-level attributes for hg, svn, and git A-L packages	2018-07-25 23:10:10 -07:00
bsseeker2
bucky
bumpversion	Add package for "bumpversion" (#8078 )	2018-05-12 18:37:10 -05:00
busco	Add top-level attributes for hg, svn, and git A-L packages	2018-07-25 23:10:10 -07:00
butter
bwa	Remove unnecessary version-specific URL overrides (#8693 )	2018-07-12 07:28:11 +02:00
bwtool	New packages: libbeato bwtool. (#8681 )	2018-07-11 10:33:44 -05:00
byobu	byobu: update package (#8628 )	2018-07-02 15:17:39 -05:00
bzip2
c-blosc
c-lime
caffe
cairo
cairomm	new packages: workrave and its dependencies (#7753 )	2018-06-21 18:25:26 -07:00
caliper	Add top-level attributes for hg, svn, and git A-L packages	2018-07-25 23:10:10 -07:00
callpath
camellia	Add top-level attributes for hg, svn, and git A-L packages	2018-07-25 23:10:10 -07:00
candle-benchmarks
cantera
canu
cap3
cares	Add top-level attributes for hg, svn, and git A-L packages	2018-07-25 23:10:10 -07:00
cask
casper
catalyst
catch
cbench
cblas
cbtf	Add top-level attributes for hg, svn, and git A-L packages	2018-07-25 23:10:10 -07:00
cbtf-argonavis	Add top-level attributes for hg, svn, and git A-L packages	2018-07-25 23:10:10 -07:00
cbtf-argonavis-gui	Add top-level attributes for hg, svn, and git A-L packages	2018-07-25 23:10:10 -07:00
cbtf-krell	Add top-level attributes for hg, svn, and git A-L packages	2018-07-25 23:10:10 -07:00
cbtf-lanl	Add top-level attributes for hg, svn, and git A-L packages	2018-07-25 23:10:10 -07:00
ccache
cctools
cdbfasta	Add top-level attributes for hg, svn, and git A-L packages	2018-07-25 23:10:10 -07:00
cdd
cddlib
cdhit
cdo
ceed	Balay/petsc remove boost dependency (#8508 )	2018-06-24 10:52:14 -05:00
cereal
ceres-solver	votca*: update dependencies (#8757 )	2018-07-19 11:06:16 -05:00
cfitsio	Add CFITSIO 3.450 (#8602 )	2018-06-28 11:28:22 -05:00
cgal	cgal: added version 4.12 (#8252 )	2018-05-23 10:11:03 -05:00
cgm
cgns
charliecloud	Added latest version of charliecloud (#8792 )	2018-07-26 06:54:09 +02:00
charm	Replace git=git with explicit branch names	2018-07-25 23:10:10 -07:00
check
chlorop
chombo	Add top-level attributes for hg, svn, and git A-L packages	2018-07-25 23:10:10 -07:00
cistem
cityhash	Add top-level attributes for hg, svn, and git A-L packages	2018-07-25 23:10:10 -07:00
clamr	Add top-level attributes for hg, svn, and git A-L packages	2018-07-25 23:10:10 -07:00
clapack	New package: clapack (#7992 )	2018-06-04 13:19:27 -05:00
cleaveland4
cleverleaf	Add top-level attributes for hg, svn, and git A-L packages	2018-07-25 23:10:10 -07:00
clfft
clhep
clingo	compiler flags: add cxx98 standard support (#7601 )	2018-06-08 13:49:31 -07:00
cloc
cloog
cloverleaf
cloverleaf3d
clustalo
clustalw
cmake	CMake: patch for NAG. (#8869 )	2018-08-02 11:17:15 -05:00
cmocka
cmor
cnmem	Add top-level attributes for hg, svn, and git A-L packages	2018-07-25 23:10:10 -07:00
cnpy	Add top-level attributes for hg, svn, and git A-L packages	2018-07-25 23:10:10 -07:00
cntk	Add top-level attributes for hg, svn, and git A-L packages	2018-07-25 23:10:10 -07:00
cntk1bitsgd	Add top-level attributes for hg, svn, and git A-L packages	2018-07-25 23:10:10 -07:00
codar-cheetah	Add top-level attributes for hg, svn, and git A-L packages	2018-07-25 23:10:10 -07:00
coevp	Add top-level attributes for hg, svn, and git A-L packages	2018-07-25 23:10:10 -07:00
cohmm	Add top-level attributes for hg, svn, and git A-L packages	2018-07-25 23:10:10 -07:00
coinhsl
colm	New colm, ragel packages (#7867 )	2018-04-23 10:50:58 -05:00
colordiff
comd	Add top-level attributes for hg, svn, and git A-L packages	2018-07-25 23:10:10 -07:00
compiz
compositeproto
conduit	Add top-level attributes for hg, svn, and git A-L packages	2018-07-25 23:10:10 -07:00
constype
converge
coreutils	coreutils: add version 8.29	2018-06-24 16:39:04 -07:00
corset
cosmomc
cosp2	Add top-level attributes for hg, svn, and git A-L packages	2018-07-25 23:10:10 -07:00
cp2k
cppad	Replace git=git with explicit branch names	2018-07-25 23:10:10 -07:00
cppcheck	add variant htmlreport to package cppcheck (#7824 )	2018-04-21 10:26:37 -05:00
cpprestsdk
cppunit
cppzmq	Add top-level attributes for hg, svn, and git A-L packages	2018-07-25 23:10:10 -07:00
cpu-features	Add top-level attributes for hg, svn, and git A-L packages	2018-07-25 23:10:10 -07:00
cpuinfo	Add top-level attributes for hg, svn, and git A-L packages	2018-07-25 23:10:10 -07:00
cram
cryptopp	Add cryptopp 7.0.0 (#8224 )	2018-05-21 11:52:25 -05:00
cscope
csdp
ctffind
cub
cube	Update scorep and friends to newest versions (#8171 )	2018-05-17 19:52:01 -05:00
cuda	CUDA 9.2 (#8238 )	2018-05-22 12:45:47 +02:00
cuda-memtest	Add top-level attributes for hg, svn, and git A-L packages	2018-07-25 23:10:10 -07:00
cudnn
cufflinks
cups
curl	Add cURL 7.60.0 (#8210 )	2018-05-20 15:04:28 -05:00
cvs
czmq
dakota
daligner
damageproto
damselfly	tests: add checks and tests for consistent version() arguments	2018-07-25 23:10:10 -07:00
darshan-runtime
darshan-util
dash
datamash	Add info for datamash@1.3 (#8261 )	2018-05-23 18:40:14 -05:00
dataspaces	Add top-level attributes for hg, svn, and git A-L packages	2018-07-25 23:10:10 -07:00
davix	Add new package: davix (#8376 )	2018-06-06 18:54:07 -05:00
dbus
dealii	Add top-level attributes for hg, svn, and git A-L packages	2018-07-25 23:10:10 -07:00
dealii-parameter-gui	Add top-level attributes for hg, svn, and git A-L packages	2018-07-25 23:10:10 -07:00
deconseq-standalone
dejagnu
delly2	Add top-level attributes for hg, svn, and git A-L packages	2018-07-25 23:10:10 -07:00
denovogear
dia	Dia needs access to gettext and pkg-config. (#8840 )	2018-08-01 19:12:17 -05:00
dialign-tx
diamond	DIAMOND: Add version 0.9.20 (#7847 )	2018-04-21 09:57:06 -05:00
diffsplice
direnv
discovar
discovardenovo
dislin	style: bring packages in compliance with pep8-naming	2018-07-19 00:41:36 -07:00
dlpack	Add top-level attributes for hg, svn, and git A-L packages	2018-07-25 23:10:10 -07:00
dmlc-core	Add top-level attributes for hg, svn, and git A-L packages	2018-07-25 23:10:10 -07:00
dmtcp	Add package DMTCP (#8808 )	2018-07-26 09:47:55 -05:00
dmxproto
docbook-xml
docbook-xsl
dos2unix
double-conversion
doxygen
dri2proto
dri3proto
dsdp
dsrc
dtcmp
dyninst	Add top-level attributes for hg, svn, and git A-L packages	2018-07-25 23:10:10 -07:00
ea-utils
easybuild
ebms	Add top-level attributes for hg, svn, and git A-L packages	2018-07-25 23:10:10 -07:00
eccodes
eclipse-gcj-parser	new package: pdftk (#8166 )	2018-06-12 11:25:20 -07:00
ecp-proxy-apps
ed
editres
eigen
elasticsearch	Added elastic search (#8424 )	2018-06-07 23:17:07 -05:00
elemental	Add top-level attributes for hg, svn, and git A-L packages	2018-07-25 23:10:10 -07:00
elfutils	Add the ability to build the dyninst master branch under the develop version name. (#8455 )	2018-06-13 13:35:32 -07:00
elk
elpa	elpa: add 2018.05.001.rc1 and 2017.11.001 (#8512 )	2018-06-22 07:52:40 -05:00
emacs	Update package: add info for emacs@26.1 (#8302 )	2018-05-30 10:36:20 -05:00
emboss	Skip update check. (#8683 )	2018-07-27 09:57:05 -05:00
encodings
environment-modules
eospac	clean up version names (#8368 )	2018-06-04 15:04:12 -05:00
er	Further improvements to version parsing	2018-07-25 23:10:10 -07:00
es
esmf	add commented test dependencies (#8407 )	2018-06-07 10:33:59 -05:00
essl	Unit test fixes	2018-07-25 23:10:10 -07:00
ethminer
etsf-io
everytrace	Add top-level attributes for hg, svn, and git A-L packages	2018-07-25 23:10:10 -07:00
everytrace-example	Add top-level attributes for hg, svn, and git A-L packages	2018-07-25 23:10:10 -07:00
evieext
exabayes
examinimd	Add top-level attributes for hg, svn, and git A-L packages	2018-07-25 23:10:10 -07:00
exampm	Add top-level attributes for hg, svn, and git A-L packages	2018-07-25 23:10:10 -07:00
exasp2	Add top-level attributes for hg, svn, and git A-L packages	2018-07-25 23:10:10 -07:00
exmcutils
exodusii	Add top-level attributes for hg, svn, and git A-L packages	2018-07-25 23:10:10 -07:00
exonerate
expat	libexpat: Fix for older systems, move to GitHub (#8135 )	2018-05-17 20:04:57 -05:00
expect
express	Add top-level attributes for hg, svn, and git A-L packages	2018-07-25 23:10:10 -07:00
extrae
exuberant-ctags
f90cache
fabtests	fabtests: new package (#7837 )	2018-04-25 10:29:29 -05:00
falcon	Add top-level attributes for hg, svn, and git A-L packages	2018-07-25 23:10:10 -07:00
farmhash	Add top-level attributes for hg, svn, and git A-L packages	2018-07-25 23:10:10 -07:00
fast-gbs	Add top-level attributes for hg, svn, and git A-L packages	2018-07-25 23:10:10 -07:00
fastjar
fastmath
fastme
fastphase
fastq-screen
fastqc	fastqc: Add version 0.11.7 (#8319 )	2018-05-30 12:30:50 -05:00
fastqvalidator	Add top-level attributes for hg, svn, and git A-L packages	2018-07-25 23:10:10 -07:00
fasttree
fastx-toolkit
fenics
fermi
fermikit	Add top-level attributes for hg, svn, and git A-L packages	2018-07-25 23:10:10 -07:00
fermisciencetools	Fermi Science Tools: New package (#8126 )	2018-06-07 14:07:39 -05:00
ferret
ffmpeg
fftw	fftw: version bump (#8723 )	2018-07-17 11:11:19 -05:00
fimpute
findutils
fio
fish
fixesproto
flac
flang	Add top-level attributes for hg, svn, and git A-L packages	2018-07-25 23:10:10 -07:00
flann	add commented test dependencies (#8407 )	2018-06-07 10:33:59 -05:00
flash
flatbuffers	Parquet: new packages (#8601 )	2018-07-04 07:24:38 -05:00
flecsale	Add top-level attributes for hg, svn, and git A-L packages	2018-07-25 23:10:10 -07:00
flecsi	Add top-level attributes for hg, svn, and git A-L packages	2018-07-25 23:10:10 -07:00
flex	flex: use 2.6.3. by default (#8154 )	2018-05-17 13:58:29 -07:00
flint	Replace git=git with explicit branch names	2018-07-25 23:10:10 -07:00
flit
fltk
flux	Add top-level attributes for hg, svn, and git A-L packages	2018-07-25 23:10:10 -07:00
fluxbox	Replace pkg-config dependencies with virtual (#8783 )	2018-08-02 13:29:04 -04:00
fmt
foam-extend	All git URLs end in .git	2018-07-25 23:10:10 -07:00
folly
font-adobe-75dpi
font-adobe-100dpi
font-adobe-utopia-75dpi
font-adobe-utopia-100dpi
font-adobe-utopia-type1
font-alias
font-arabic-misc
font-bh-75dpi
font-bh-100dpi
font-bh-lucidatypewriter-75dpi
font-bh-lucidatypewriter-100dpi
font-bh-ttf
font-bh-type1
font-bitstream-75dpi
font-bitstream-100dpi
font-bitstream-speedo
font-bitstream-type1
font-cronyx-cyrillic
font-cursor-misc
font-daewoo-misc
font-dec-misc
font-ibm-type1
font-isas-misc
font-jis-misc
font-micro-misc
font-misc-cyrillic
font-misc-ethiopic
font-misc-meltho
font-misc-misc
font-mutt-misc
font-schumacher-misc
font-screen-cyrillic
font-sony-misc
font-sun-misc
font-util
font-winitzki-cyrillic
font-xfree86-type1
fontcacheproto
fontconfig
fontsproto
fonttosfnt
fp16	Add top-level attributes for hg, svn, and git A-L packages	2018-07-25 23:10:10 -07:00
fpc
fr-hit
freebayes	Add top-level attributes for hg, svn, and git A-L packages	2018-07-25 23:10:10 -07:00
freeglut	freeglut: new package (#7820 )	2018-04-18 19:49:42 -05:00
freetype	freetype: adding subdir to cpath for deps (#7818 )	2018-04-19 09:00:49 -05:00
fseq
fsl
fslsfonts
fstobdf
ftgl	FTGL package workarounds (#8812 )	2018-07-26 15:54:46 -05:00
funhpc	Add top-level attributes for hg, svn, and git A-L packages	2018-07-25 23:10:10 -07:00
fyba	Fix compilation of FYBA with GCC 6 (#8273 )	2018-05-26 10:36:34 -05:00
gapbs
gapcloser
gapfiller
gasnet
gatk	Bump gatk version to 4.0.4.0. (#7985 )	2018-05-03 10:08:48 -05:00
gaussian
gawk
gblocks
gcc	gcc: Add 8.2.0 (#8813 )	2018-07-27 08:14:49 -05:00
gccmakedep
gccxml	Add top-level attributes for hg, svn, and git A-L packages	2018-07-25 23:10:10 -07:00
gconf
gcta
gdal	Replace pkg-config dependencies with virtual (#8783 )	2018-08-02 13:29:04 -04:00
gdb	Add gdb@8.1; add optional lzma dependency for debug information support (#8068 )	2018-05-08 21:08:39 -05:00
gdbm	gdbm: Get working on CentOS5 and Other Older Systems (#8134 )	2018-05-21 16:24:38 -05:00
gdk-pixbuf
gdl	GDL and missing dependencies (#8283 )	2018-06-08 08:35:28 -05:00
geant4
gearshifft	Further improvements to version parsing	2018-07-25 23:10:10 -07:00
gemmlowp	Add top-level attributes for hg, svn, and git A-L packages	2018-07-25 23:10:10 -07:00
genemark-et
genomefinisher	genomefinisher: Create new package (#7989 )	2018-05-03 13:11:00 -05:00
genometools	Aegean: new package (#8113 )	2018-05-14 11:10:19 -05:00
geopm	Add top-level attributes for hg, svn, and git A-L packages	2018-07-25 23:10:10 -07:00
geos	Add Python/Ruby bindings to GEOS package (#8218 )	2018-05-21 15:59:50 -05:00
gettext	Fix gettext: Problem with libxml2 (#8132 )	2018-05-26 10:18:14 -05:00
gflags
ghost	Add top-level attributes for hg, svn, and git A-L packages	2018-07-25 23:10:10 -07:00
ghostscript
ghostscript-fonts
giflib
git	Fix digests for git@2.17.0 and git@2.17.1 (#8652 )	2018-07-06 14:57:45 -05:00
git-imerge
git-lfs	Add top-level attributes for hg, svn, and git A-L packages	2018-07-25 23:10:10 -07:00
gl2ps
glew	glew: adding gl dependency (#7817 )	2018-04-18 17:58:45 -05:00
glfmultiples
glib	glib: Update to 2.56.1 (#8523 )	2018-06-20 11:20:04 -05:00
glibmm	new packages: workrave and its dependencies (#7753 )	2018-06-21 18:25:26 -07:00
glimmer
glm
global
globalarrays	Update GlobalArrays package to new releases (#7840 )	2018-05-21 20:06:29 -05:00
globus-toolkit
glog	Glog: make is a function (#8648 )	2018-07-06 07:15:47 -05:00
gloo	Add top-level attributes for hg, svn, and git A-L packages	2018-07-25 23:10:10 -07:00
glpk
glproto
glvis	Add top-level attributes for hg, svn, and git A-L packages	2018-07-25 23:10:10 -07:00
gmake	gmake: fix build with glibc 2.27 (#8344 )	2018-06-01 10:47:13 -05:00
gmap-gsnap
gmime
gmp	gmp: update (#7999 )	2018-05-03 16:53:19 -05:00
gmsh	gmsh: add netgen and tetgen (#8060 )	2018-05-11 14:22:12 +02:00
gnat
gnu-prolog
gnupg
gnuplot	gnuplot: add 5.2.2 (#7831 )	2018-04-21 10:24:36 -05:00
gnutls
go	go: Update to 1.10.3 (#8426 )	2018-06-08 07:35:43 -05:00
go-bootstrap	Further improvements to version parsing	2018-07-25 23:10:10 -07:00
gobject-introspection	init: factor paths out of spack/__init__.py and into spack.paths module	2018-05-17 14:10:30 -07:00
googletest	googletest: add a shared variant for all supported versions (#8373 )	2018-06-07 10:34:37 -05:00
gotcha	Add top-level attributes for hg, svn, and git A-L packages	2018-07-25 23:10:10 -07:00
gource
gperf
gperftools
gplates	gplates: new package (#8336 )	2018-06-13 08:57:52 -05:00
grackle	Add grackle 3.1 (#7805 )	2018-04-18 07:23:09 -05:00
gradle	Bump gradle to 4.8.1. (#8625 )	2018-07-02 12:46:46 -05:00
grandr
graph500
graphicsmagick	GDL and missing dependencies (#8283 )	2018-06-08 08:35:28 -05:00
graphlib
graphmap	Add top-level attributes for hg, svn, and git A-L packages	2018-07-25 23:10:10 -07:00
graphviz	Replace pkg-config dependencies with virtual (#8783 )	2018-08-02 13:29:04 -04:00
grass	Package/grass (#8505 )	2018-06-22 18:03:05 -05:00
grib-api
groff
gromacs	Add top-level attributes for hg, svn, and git A-L packages	2018-07-25 23:10:10 -07:00
gsl	GSL: 2.5 is a new version. (#8827 )	2018-07-30 08:38:37 +02:00
gslib	Add top-level attributes for hg, svn, and git A-L packages	2018-07-25 23:10:10 -07:00
gtkmm	new packages: workrave and its dependencies (#7753 )	2018-06-21 18:25:26 -07:00
gtkorvo-atl	Add top-level attributes for hg, svn, and git A-L packages	2018-07-25 23:10:10 -07:00
gtkorvo-cercs-env	Add top-level attributes for hg, svn, and git A-L packages	2018-07-25 23:10:10 -07:00
gtkorvo-dill	Add top-level attributes for hg, svn, and git A-L packages	2018-07-25 23:10:10 -07:00
gtkorvo-enet	Gtkorvo updates (#8663 )	2018-07-10 12:50:10 -05:00
gtkplus
gts
guidance
guile
gurobi
h5hut
h5part
h5utils
h5z-zfp	Add top-level attributes for hg, svn, and git A-L packages	2018-07-25 23:10:10 -07:00
hacckernels	Add top-level attributes for hg, svn, and git A-L packages	2018-07-25 23:10:10 -07:00
hadoop	Added the latest versions of a few packages (#7910 )	2018-04-26 14:46:45 +02:00
halc	halc: Create new package. (#8795 )	2018-07-26 15:55:43 -05:00
hapcut2	Add top-level attributes for hg, svn, and git A-L packages	2018-07-25 23:10:10 -07:00
hapdip	Add top-level attributes for hg, svn, and git A-L packages	2018-07-25 23:10:10 -07:00
haploview
harfbuzz
harminv
hdf
hdf5	hdf5: Fix build with %gcc@8 (#8788 )	2018-07-26 15:58:00 -05:00
hdf5-blosc	Add top-level attributes for hg, svn, and git A-L packages	2018-07-25 23:10:10 -07:00
help2man
hepmc
heppdt
hic-pro	HiC-pro depends on python+ucs4. (#8564 )	2018-06-25 12:04:00 -05:00
highfive
highwayhash	Add top-level attributes for hg, svn, and git A-L packages	2018-07-25 23:10:10 -07:00
hiop	Add top-level attributes for hg, svn, and git A-L packages	2018-07-25 23:10:10 -07:00
hisat2
hisea	hisea: new package (#8112 )	2018-05-14 09:46:54 -05:00
hmmer	hmmer: added version 3.2.1 & updated URL (#8787 )	2018-07-26 10:07:55 -05:00
hoomd-blue	All git URLs end in .git	2018-07-25 23:10:10 -07:00
hpccg
hpctoolkit	All git URLs end in .git	2018-07-25 23:10:10 -07:00
hpctoolkit-externals	All git URLs end in .git	2018-07-25 23:10:10 -07:00
hpgmg	Add top-level attributes for hg, svn, and git A-L packages	2018-07-25 23:10:10 -07:00
hpl
hpx
hpx5
hsakmt
hstr
htop
htslib	Bump samtools, hstlib and bcftools to version 1.8. (#8020 )	2018-05-04 16:27:54 -05:00
httpie
hub	Replace git=git with explicit branch names	2018-07-25 23:10:10 -07:00
hunspell
hwloc
hybpiper
hydra
hydrogen	Add top-level attributes for hg, svn, and git A-L packages	2018-07-25 23:10:10 -07:00
hypre	Add top-level attributes for hg, svn, and git A-L packages	2018-07-25 23:10:10 -07:00
i3	Replace pkg-config dependencies with virtual (#8783 )	2018-08-02 13:29:04 -04:00
ibmisc
iceauth
icedtea
icet	Add top-level attributes for hg, svn, and git A-L packages	2018-07-25 23:10:10 -07:00
ico
icu4c
id3lib
idba
igraph
igv
igvtools
ilmbase
image-magick
imake
imp	A new pacakge: IMP. (#7859 )	2018-04-21 13:08:44 -05:00
impute2
infernal
inputproto
intel
intel-daal
intel-gpu-tools
intel-ipp
intel-mkl
intel-mkl-dnn
intel-mpi
intel-parallel-studio
intel-tbb	intel-tbb: Add `tm` variant to disable transactional memory. (#8799 )	2018-07-25 23:14:17 -07:00
intel-xed	All git URLs end in .git	2018-07-25 23:10:10 -07:00
intltool	intltool requires patching for newer perl versions (#8061 )	2018-05-08 17:53:50 -05:00
ior
iozone
iperf2	Packaged iperf2 (#8765 )	2018-07-19 17:55:06 -05:00
iperf3	Packaged iperf3 (#8762 )	2018-07-19 16:02:55 -05:00
ipopt
isaac	Add top-level attributes for hg, svn, and git A-L packages	2018-07-25 23:10:10 -07:00
isaac-server	Add top-level attributes for hg, svn, and git A-L packages	2018-07-25 23:10:10 -07:00
isl
itstool
itsx
jags
jansson
jasper	Add JasPer 2.0.14 (#8207 )	2018-05-26 10:37:48 -05:00
jbigkit
jchronoss
jdk	Added the latest versions of a few packages (#7910 )	2018-04-26 14:46:45 +02:00
jellyfish	Remove unnecessary version-specific URL overrides (#8693 )	2018-07-12 07:28:11 +02:00
jemalloc
jmol
jq
json-c	gplates: new package (#8336 )	2018-06-13 08:57:52 -05:00
json-cwx
json-glib
jsoncpp	add commented test dependencies (#8407 )	2018-06-07 10:33:59 -05:00
judy
julia	Add top-level attributes for hg, svn, and git A-L packages	2018-07-25 23:10:10 -07:00
k8
kahip	Replace git=git with explicit branch names	2018-07-25 23:10:10 -07:00
kaiju	A new pacakge: Kaiju. (#8111 )	2018-05-14 11:07:00 -05:00
kaks-calculator
kaldi	Add top-level attributes for hg, svn, and git A-L packages	2018-07-25 23:10:10 -07:00
kallisto
kbproto
kdiff3
kealib	Add top-level attributes for hg, svn, and git A-L packages	2018-07-25 23:10:10 -07:00
kentutils	Add top-level attributes for hg, svn, and git A-L packages	2018-07-25 23:10:10 -07:00
kmergenie
kokkos	Add top-level attributes for hg, svn, and git A-L packages	2018-07-25 23:10:10 -07:00
kraken
krb5	Add package wireshark and dependencies (#8024 )	2018-05-06 09:32:06 -05:00
krims	Add top-level attributes for hg, svn, and git A-L packages	2018-07-25 23:10:10 -07:00
kripke
kvasir-mpl	Add top-level attributes for hg, svn, and git A-L packages	2018-07-25 23:10:10 -07:00
kvtree	Further improvements to version parsing	2018-07-25 23:10:10 -07:00
laghos	Update homepage for laghos (#8864 )	2018-08-02 13:03:52 -04:00
lammps	All git URLs end in .git	2018-07-25 23:10:10 -07:00
last
latte	Further improvements to version parsing	2018-07-25 23:10:10 -07:00
launchmon
lazyten	Add top-level attributes for hg, svn, and git A-L packages	2018-07-25 23:10:10 -07:00
lbann	Add top-level attributes for hg, svn, and git A-L packages	2018-07-25 23:10:10 -07:00
lbxproxy
lcals
lcms	Add lcms 2.9 (#8219 )	2018-05-21 15:59:11 -05:00
ldc	Further improvements to version parsing	2018-07-25 23:10:10 -07:00
ldc-bootstrap
legion	Add top-level attributes for hg, svn, and git A-L packages	2018-07-25 23:10:10 -07:00
leveldb
lftp
libaec	Use GitLab's API endpoint for fetching a git snapshot. (#7881 )	2018-04-26 16:40:11 -05:00
libaio
libapplewm
libarchive
libassuan
libatomic-ops
libbeagle	libbeagle: add java dependency so jni hooks get built (#8524 )	2018-07-22 17:16:43 -05:00
libbeato	New packages: libbeato bwtool. (#8681 )	2018-07-11 10:33:44 -05:00
libbsd
libbson
libcanberra
libcap
libceed	Add top-level attributes for hg, svn, and git A-L packages	2018-07-25 23:10:10 -07:00
libcerf
libcheck
libcint	Add libcint version 3.0.12 (#7972 )	2018-05-02 10:44:58 -05:00
libcircle
libconfig	Further improvements to version parsing	2018-07-25 23:10:10 -07:00
libcroco
libctl
libdivsufsort
libdmx
libdrm
libdwarf	Add the ability to build the dyninst master branch under the develop version name. (#8455 )	2018-06-13 13:35:32 -07:00
libedit
libelf
libemos
libepoxy
libev	Replace git=git with explicit branch names	2018-07-25 23:10:10 -07:00
libevent
libevpath	Add top-level attributes for hg, svn, and git A-L packages	2018-07-25 23:10:10 -07:00
libfabric	Libfabric: updating fabrics & adding deps (#7838 )	2018-04-25 10:35:36 -05:00
libffi
libffs	Add top-level attributes for hg, svn, and git A-L packages	2018-07-25 23:10:10 -07:00
libfontenc
libfs
libgcrypt
libgd
libgeotiff	Add libgeotiff package (#8203 )	2018-05-20 15:02:49 -05:00
libgit2
libgpg-error
libgpuarray
libgridxc
libgtextutils
libharu	Add top-level attributes for hg, svn, and git A-L packages	2018-07-25 23:10:10 -07:00
libhio	added line 43 (#8369 )	2018-06-04 15:04:45 -05:00
libice
libiconv
libint
libjpeg	Update the hash of libjpeg v9c. (#8230 )	2018-05-21 15:53:55 -05:00
libjpeg-turbo	libjpeg-turbo: updated checksums and added autoreconf for older versions (#8411 )	2018-06-06 16:18:03 -05:00
libksba
liblbxutil
liblockfile
libmatheval	fix to build libmatheval with guile@2.0: (#8680 )	2018-07-22 17:07:44 -05:00
libmaxminddb	Add package wireshark and dependencies (#8024 )	2018-05-06 09:32:06 -05:00
libmesh
libmng
libmongoc
libmonitor	Add top-level attributes for hg, svn, and git A-L packages	2018-07-25 23:10:10 -07:00
libnbc
libnl	libnl: new package (#7833 )	2018-04-25 10:33:01 -05:00
libnova	libnova: new package (#8666 )	2018-07-09 16:16:09 -05:00
libogg
liboldx
libpcap
libpciaccess
libpfm4
libpipeline	add commented test dependencies (#8407 )	2018-06-07 10:33:59 -05:00
libpng
libpsl
libpthread-stubs
libquo	Add top-level attributes for hg, svn, and git A-L packages	2018-07-25 23:10:10 -07:00
librom	Add top-level attributes for hg, svn, and git A-L packages	2018-07-25 23:10:10 -07:00
libshm	Add top-level attributes for hg, svn, and git A-L packages	2018-07-25 23:10:10 -07:00
libsigcpp	new packages: workrave and its dependencies (#7753 )	2018-06-21 18:25:26 -07:00
libsigsegv
libsm
libsodium
libspatialindex
libsplash	Add top-level attributes for hg, svn, and git A-L packages	2018-07-25 23:10:10 -07:00
libssh	add variants and conflicts for curl (#7804 )	2018-04-19 07:23:16 -05:00
libssh2
libsvm
libszip
libtermkey
libtiff	Add libtiff 4.0.9 (#8201 )	2018-05-20 15:01:11 -05:00
libtool
libunistring
libunwind	libunwind: document platform=darwin conflict (#8824 )	2018-07-29 08:44:17 -07:00
libuuid
libuv
libvorbis
libvterm
libwebsockets
libwindowswm
libx11
libxau
libxaw
libxaw3d
libxc
libxcb
libxcomposite
libxcursor
libxdamage
libxdmcp
libxevie
libxext
libxfixes
libxfont
libxfont2
libxfontcache
libxft
libxi
libxinerama
libxkbcommon
libxkbfile
libxkbui
libxml2	Add libxml2 2.9.8 (#8211 )	2018-05-20 15:04:47 -05:00
libxmu
libxp
libxpm
libxpresent
libxprintapputil
libxprintutil
libxrandr
libxrender
libxres
libxscrnsaver
libxshmfence	libxshmfence: Update to 1.3 (#8667 )	2018-07-10 07:58:44 -05:00
libxslt
libxsmm	Replace git=git with explicit branch names	2018-07-25 23:10:10 -07:00
libxstream
libxt	shoremap: new package (#7343 )	2018-05-12 08:22:45 +02:00
libxtrap
libxtst
libxv
libxvmc
libxxf86dga
libxxf86misc
libxxf86vm
libyogrt
libzip
likwid	Add newer likwid versions 4.3.1 and 4.3.2 (#8488 )	2018-06-15 10:14:00 -05:00
linkphase3	Add top-level attributes for hg, svn, and git A-L packages	2018-07-25 23:10:10 -07:00
linux-headers
listres
llvm	Updated llvm to version 6.0.1. The previous 6.0.0 had an incorrectly … (#8801 )	2018-07-26 17:47:18 -05:00
llvm-openmp-ompt	Add top-level attributes for hg, svn, and git A-L packages	2018-07-25 23:10:10 -07:00
lmdb
lmod	lmod: add version 7.8 (#8838 )	2018-07-31 23:19:41 -07:00
lndir
log4cplus	Add new versions for log4cplus. (#8621 )	2018-07-03 10:08:22 -05:00
log4cxx
loki	A new package: loki. (#7908 )	2018-04-26 08:37:03 -05:00
lordec	lordec: Create new package. (#8095 )	2018-05-14 16:56:49 -05:00
lrslib
lrzip	Replace git=git with explicit branch names	2018-07-25 23:10:10 -07:00
lsof
ltrace
lua
lua-bitlib
lua-jit
lua-lpeg
lua-luafilesystem
lua-luaposix
lua-mpack
luit
lulesh
lumpy-sv
lwgrp
lwm2	Add top-level attributes for hg, svn, and git A-L packages	2018-07-25 23:10:10 -07:00
lz4	add commented test dependencies (#8407 )	2018-06-07 10:33:59 -05:00
lzma
lzo
m4	Fix m4 on OS X highsierra (#8559 )	2018-06-23 20:34:04 -05:00
macsio	Add top-level attributes for git M-P packages	2018-07-25 23:10:10 -07:00
mad-numdiff	All git URLs end in .git	2018-07-25 23:10:10 -07:00
mafft
magics
magma
makedepend
mallocmc	Add top-level attributes for git M-P packages	2018-07-25 23:10:10 -07:00
man-db
manta	manta: Create new package (#8043 )	2018-05-07 17:22:43 -05:00
maq
mariadb
masa	Add top-level attributes for git M-P packages	2018-07-25 23:10:10 -07:00
masurca	masurca: new version (#8094 )	2018-05-11 14:43:21 -05:00
matio
matlab	style: bring packages in compliance with pep8-naming	2018-07-19 00:41:36 -07:00
maven
maverick
mawk
mbedtls
mc	Replace pkg-config dependencies with virtual (#8783 )	2018-08-02 13:29:04 -04:00
mcl
mdtest	Add top-level attributes for git M-P packages	2018-07-25 23:10:10 -07:00
med	add MoFEM packages (#8700 )	2018-07-22 15:26:30 -05:00
meep
mefit	Add top-level attributes for git M-P packages	2018-07-25 23:10:10 -07:00
megahit	A new package: megahit. (#8471 )	2018-06-14 13:45:12 -05:00
memaxes
meme
memkind	Create new package: memkind (#8242 )	2018-05-22 13:37:03 -05:00
meraculous	Add top-level attributes for git M-P packages	2018-07-25 23:10:10 -07:00
mercurial
mesa	New version mesa-18.1.2 (#8589 )	2018-06-27 14:57:55 -05:00
mesa-glu
meshkit
meson
mesquite
metabat	metabat: Create new package (#7991 )	2018-05-06 10:56:03 -05:00
metaphysicl
metasv
metis	style: bring packages in compliance with pep8-naming	2018-07-19 00:41:36 -07:00
mfem	mfem: mfem-3.3-3.4-petsc-3.9.patch is not needed for latest develop version (#8809 )	2018-07-26 09:47:28 -05:00
microbiomeutil
minced
mindthegap	Add top-level attributes for git M-P packages	2018-07-25 23:10:10 -07:00
miniaero	Add top-level attributes for git M-P packages	2018-07-25 23:10:10 -07:00
miniamr	Further improvements to version parsing	2018-07-25 23:10:10 -07:00
miniasm	Add top-level attributes for git M-P packages	2018-07-25 23:10:10 -07:00
miniconda2	Bump miniconda to 4.5.4. (#8435 )	2018-06-10 15:15:43 -05:00
miniconda3	Bump miniconda to 4.5.4. (#8435 )	2018-06-10 15:15:43 -05:00
minife
minighost
minigmg
minimap2
minimd
miniqmc
minisign
minismac2d
minitri
minixyce
minuit	Added minuit package (#8536 )	2018-06-22 11:27:25 -05:00
mira
mirdeep2	Package/mirdeep/fix for new url take2 (#8247 )	2018-05-23 07:25:42 -05:00
mitofates	mitofates: more deps and a patch to make it functional (#8686 )	2018-07-12 10:23:22 +02:00
mitos	Add top-level attributes for git M-P packages	2018-07-25 23:10:10 -07:00
mkfontdir
mkfontscale
mlhka	Add top-level attributes for git M-P packages	2018-07-25 23:10:10 -07:00
moab	add necessary dependence on lapacak, and fix ld_flags for blas (#8776 )	2018-07-22 16:32:47 -05:00
modern-wheel
mofem-cephas	Add top-level attributes for git M-P packages	2018-07-25 23:10:10 -07:00
mofem-fracture-module	Add top-level attributes for git M-P packages	2018-07-25 23:10:10 -07:00
mofem-minimal-surface-equation	Add top-level attributes for git M-P packages	2018-07-25 23:10:10 -07:00
mofem-users-modules	add MoFEM packages (#8700 )	2018-07-22 15:26:30 -05:00
molcas
mono	Add a new version 5.4.1.7 for mono. (#7866 )	2018-04-23 07:31:29 -05:00
mosh
mothur	mothur: mpi not used (#8706 )	2018-07-13 20:31:25 -05:00
motif
motioncor2
mozjs
mpark-variant
mpc
mpe2
mpest
mpfr
mpibash
mpiblast
mpich	Add top-level attributes for git M-P packages	2018-07-25 23:10:10 -07:00
mpifileutils	Replace git=git with explicit branch names	2018-07-25 23:10:10 -07:00
mpilander	Add top-level attributes for git M-P packages	2018-07-25 23:10:10 -07:00
mpileaks
mpip
mpir	Replace git=git with explicit branch names	2018-07-25 23:10:10 -07:00
mpix-launch-swift	Add top-level attributes for git M-P packages	2018-07-25 23:10:10 -07:00
mrbayes	Add top-level attributes for git M-P packages	2018-07-25 23:10:10 -07:00
mrnet	Replace git=git with explicit branch names	2018-07-25 23:10:10 -07:00
mrtrix3	Add top-level attributes for git M-P packages	2018-07-25 23:10:10 -07:00
mscgen
msgpack-c	Add msgpack-c 3.0.1 (#8264 )	2018-05-24 10:47:31 -05:00
mshadow	Add top-level attributes for git M-P packages	2018-07-25 23:10:10 -07:00
multitail
multiverso	Add top-level attributes for git M-P packages	2018-07-25 23:10:10 -07:00
mummer
mumps
munge
muparser
muscle
muse
muster
mvapich2	Unset F90 and F90FLAGS in mvapich2 (#8698 )	2018-07-13 20:32:02 -05:00
mxml
mxnet
nag
nalu	Add top-level attributes for git M-P packages	2018-07-25 23:10:10 -07:00
nalu-wind	Add top-level attributes for git M-P packages	2018-07-25 23:10:10 -07:00
namd
nano
nanoflann
nanopb	A new package: nanopb. (#7981 )	2018-05-03 10:12:37 -05:00
nasm	nasm: Fix compilation with GCC 8 (#8307 )	2018-05-29 10:28:17 -05:00
nauty
ncbi-magicblast	New package ncbi-magicblast (#8517 )	2018-06-22 17:48:32 -05:00
ncbi-rmblastn
ncbi-toolkit	style: bring packages in compliance with pep8-naming	2018-07-19 00:41:36 -07:00
nccl
nccmp
ncdu
ncftp
ncl	Ncl update (#8747 )	2018-07-22 16:54:06 -05:00
nco	nco: Find NetCDF (#8159 )	2018-05-18 07:51:21 -05:00
ncurses	Add ncurses 6.1 (#8257 )	2018-05-23 13:27:22 -05:00
ncview
ndiff
nek5000	Add top-level attributes for git M-P packages	2018-07-25 23:10:10 -07:00
nekbone	Replace git=git with explicit branch names	2018-07-25 23:10:10 -07:00
nekcem	Add top-level attributes for git M-P packages	2018-07-25 23:10:10 -07:00
nektar	Adding nektar++ package (#8167 )	2018-06-01 09:30:06 -05:00
neovim	package neovim: add info for version 0.3.1 (#8866 )	2018-08-02 13:04:59 -04:00
netcdf	style: bring packages in compliance with pep8-naming	2018-07-19 00:41:36 -07:00
netcdf-cxx
netcdf-cxx4	netcdf-cxx4: Update to use CPPFLAGS (#8148 )	2018-05-21 16:23:35 -05:00
netcdf-fortran	netcdf-fortran: enforce autoreconf when building with NAG. (#8844 )	2018-08-02 08:32:20 -05:00
netgauge
netgen	netgen should depend on zlib (#8473 )	2018-06-14 13:43:43 -05:00
netlib-lapack	Small patch for netlib-lapack. (#8854 )	2018-08-01 18:55:07 -05:00
netlib-scalapack
netlib-xblas
nettle	Update nettle package with info for v3.4 (#8653 )	2018-07-06 14:57:32 -05:00
neuron	Replace pkg-config dependencies with virtual (#8783 )	2018-08-02 13:29:04 -04:00
nextflow
nfft	nfft: added version 3.4.1 Moved package to github (#8099 )	2018-05-12 17:25:28 +02:00
nghttp2
nginx
ngmlr
ninja
ninja-fortran
nlohmann-json
nlopt	Add top-level attributes for git M-P packages	2018-07-25 23:10:10 -07:00
nmap	Added nmap version 7.70 (#8606 )	2018-06-28 15:32:43 -05:00
nnvm	Add top-level attributes for git M-P packages	2018-07-25 23:10:10 -07:00
node-js
notmuch
npb
npm
npth
nspr
numactl	numactl: fix build with glibc-2.26 (#8615 )	2018-06-29 14:41:52 -05:00
numdiff
nut	Add top-level attributes for git M-P packages	2018-07-25 23:10:10 -07:00
nwchem	nwchem: add link type to python dep (#8759 )	2018-07-19 12:03:40 -05:00
ocaml
occa	Add top-level attributes for git M-P packages	2018-07-25 23:10:10 -07:00
oce	style: make core comply with pep8-naming	2018-07-19 00:41:36 -07:00
oclint
oclock
octave
octave-optim
octave-splines
octave-struct
octopus
of-adios-write	Add top-level attributes for git M-P packages	2018-07-25 23:10:10 -07:00
of-precice	Add top-level attributes for git M-P packages	2018-07-25 23:10:10 -07:00
omega-h	omega-h: fix -std=c++11 build error (#8543 )	2018-06-23 07:25:33 -05:00
ompss
ompt-openmp
oniguruma
ont-albacore	added albacore version 2.3.1 (#8513 )	2018-06-19 11:16:41 -05:00
opa-psm2
opam
opari2	Update scorep and friends to newest versions (#8171 )	2018-05-17 19:52:01 -05:00
openbabel
openblas	openblas: add version 0.3.2 (#8833 )	2018-08-01 19:14:48 -05:00
opencoarrays
opencv	Add top-level attributes for hg, svn, and git A-L packages	2018-07-25 23:10:10 -07:00
openexr
openfast	Add top-level attributes for git M-P packages	2018-07-25 23:10:10 -07:00
openfoam-com	Add top-level attributes for git M-P packages	2018-07-25 23:10:10 -07:00
openfoam-org	Replace git=git with explicit branch names	2018-07-25 23:10:10 -07:00
openfst	Add far variant to openfst package (#8299 )	2018-05-28 13:45:56 -05:00
opengl	Unit test fixes	2018-07-25 23:10:10 -07:00
openglu	Unit test fixes	2018-07-25 23:10:10 -07:00
openjpeg
openmc	Add top-level attributes for git M-P packages	2018-07-25 23:10:10 -07:00
openmpi	Add extra_rpaths to OpenMPI wrappers (#8687 )	2018-07-30 15:02:09 -04:00
opennurbs	Add top-level attributes for git M-P packages	2018-07-25 23:10:10 -07:00
openpmd-api	Add top-level attributes for git M-P packages	2018-07-25 23:10:10 -07:00
openscenegraph
openslide	A new package: openslide. (#7906 )	2018-04-26 07:17:15 +02:00
openspeedshop	Add top-level attributes for git M-P packages	2018-07-25 23:10:10 -07:00
openspeedshop-utils	Add top-level attributes for git M-P packages	2018-07-25 23:10:10 -07:00
openssh
openssl	openssl: add new version 1.0.2o (#8486 )	2018-06-15 09:54:52 +02:00
opium
opus
orfm
orthofinder
orthomcl
osu-micro-benchmarks
otf
otf2	Update scorep and friends to newest versions (#8171 )	2018-05-17 19:52:01 -05:00
p4est
p7zip
pacbio-daligner	Add top-level attributes for git M-P packages	2018-07-25 23:10:10 -07:00
pacbio-damasker	Add top-level attributes for git M-P packages	2018-07-25 23:10:10 -07:00
pacbio-dazz-db	Add top-level attributes for git M-P packages	2018-07-25 23:10:10 -07:00
pacbio-dextractor	Add top-level attributes for git M-P packages	2018-07-25 23:10:10 -07:00
pagit
pagmo
paml
panda
pandaseq	Replace pkg-config dependencies with virtual (#8783 )	2018-08-02 13:29:04 -04:00
pango
pangomm	new packages: workrave and its dependencies (#7753 )	2018-06-21 18:25:26 -07:00
papi	papi: Update to 5.6.0 and fix build with %gcc@8 (#8796 )	2018-07-26 10:02:07 -05:00
papyrus	Add top-level attributes for git M-P packages	2018-07-25 23:10:10 -07:00
paradiseo	Add top-level attributes for git M-P packages	2018-07-25 23:10:10 -07:00
parallel
parallel-netcdf	Turning off parallel during make install for parallel-netcdf. (#8186 )	2018-05-18 12:12:43 -05:00
paraver
paraview	paraview: set PARAVIEW_VTK_DIR in spack_env and run_env (#8308 )	2018-05-30 10:35:39 -05:00
parmetis
parmgridgen
parquet	Parquet: new packages (#8601 )	2018-07-04 07:24:38 -05:00
parsimonator	Add top-level attributes for git M-P packages	2018-07-25 23:10:10 -07:00
parsplice	Add top-level attributes for git M-P packages	2018-07-25 23:10:10 -07:00
partitionfinder
patch
patchelf
pathfinder
pax-utils
pbbam	pbbam: new package (#8365 )	2018-06-07 22:44:30 -05:00
pbmpi	Add top-level attributes for git M-P packages	2018-07-25 23:10:10 -07:00
pcma
pcre	Add PCRE 8.42 (#8213 )	2018-05-20 15:05:29 -05:00
pcre2	Add PCRE2 10.31 (#8214 )	2018-05-20 15:05:47 -05:00
pdf2svg	new package: py-weblogo (#7886 )	2018-04-24 19:31:37 -07:00
pdftk	new package: pdftk (#8166 )	2018-06-12 11:25:20 -07:00
pdsh
pdt	Add new versions for TAU and PDT package (#8497 )	2018-06-17 17:21:00 -05:00
pegtl	Further improvements to version parsing	2018-07-25 23:10:10 -07:00
pennant
percept	Add top-level attributes for git M-P packages	2018-07-25 23:10:10 -07:00
perl	Make read only source file writeable in perl before patch to avoid failures on lustre filesystem. (#8764 )	2018-07-22 16:51:59 -05:00
perl-algorithm-diff
perl-app-cmd
perl-array-utils
perl-b-hooks-endofscope
perl-bio-perl
perl-bit-vector
perl-cairo
perl-capture-tiny
perl-carp-clan
perl-class-data-inheritable
perl-class-inspector
perl-class-load
perl-class-load-xs
perl-compress-raw-bzip2	A new perl package: perl-io-compress. (#8566 )	2018-06-25 12:02:04 -05:00
perl-compress-raw-zlib	A new perl package: perl-io-compress. (#8566 )	2018-06-25 12:02:04 -05:00
perl-contextual-return	Further improvements to version parsing	2018-07-25 23:10:10 -07:00
perl-cpan-meta-check
perl-data-optlist
perl-data-stag
perl-dbd-mysql
perl-dbfile
perl-dbi
perl-devel-cycle
perl-devel-globaldestruction
perl-devel-overloadinfo
perl-devel-stacktrace
perl-digest-md5
perl-dist-checkconflicts
perl-encode-locale
perl-eval-closure
perl-exception-class
perl-exporter-tiny
perl-extutils-depends
perl-extutils-makemaker
perl-extutils-pkgconfig	Replace pkg-config dependencies with virtual (#8783 )	2018-08-02 13:29:04 -04:00
perl-file-copy-recursive
perl-file-listing
perl-file-pushd
perl-file-sharedir-install
perl-file-slurp-tiny
perl-file-slurper
perl-file-which
perl-font-ttf
perl-gd
perl-gd-graph	Further improvements to version parsing	2018-07-25 23:10:10 -07:00
perl-gd-text
perl-graph
perl-graph-readwrite
perl-html-parser
perl-html-tagset
perl-http-cookies
perl-http-daemon
perl-http-date
perl-http-message
perl-http-negotiate
perl-inline
perl-inline-c
perl-intervaltree
perl-io-compress	Further improvements to version parsing	2018-07-25 23:10:10 -07:00
perl-io-html
perl-io-sessiondata
perl-io-socket-ssl
perl-io-string
perl-json
perl-libwww-perl	py-mg-rast-tools: Create new package and its dependencies. (#7816 )	2018-04-21 10:28:44 -05:00
perl-list-moreutils
perl-log-log4perl
perl-lwp
perl-lwp-mediatypes
perl-lwp-protocol-https
perl-math-cdf
perl-math-cephes	perl-math-cephes: new package (#8671 )	2018-07-11 12:40:39 -05:00
perl-math-matrixreal
perl-module-build
perl-module-implementation
perl-module-runtime
perl-module-runtime-conflicts
perl-moose
perl-mozilla-ca
perl-mro-compat
perl-namespace-clean
perl-net-http
perl-net-scp-expect
perl-net-ssleay
perl-package-deprecationmanager
perl-package-stash
perl-package-stash-xs
perl-padwalker
perl-parallel-forkmanager
perl-params-util
perl-parse-recdescent
perl-pdf-api2
perl-pegex
perl-perlio-gzip
perl-perlio-utf8-strict
perl-soap-lite	Further improvements to version parsing	2018-07-25 23:10:10 -07:00
perl-star-fusion	Add top-level attributes for git M-P packages	2018-07-25 23:10:10 -07:00
perl-statistics-descriptive
perl-statistics-pca	perl-statistics-pca: Create new package (#7796 )	2018-04-17 13:30:12 -05:00
perl-sub-exporter
perl-sub-exporter-progressive
perl-sub-identify
perl-sub-install
perl-sub-name
perl-sub-uplevel
perl-svg
perl-swissknife
perl-task-weaken
perl-term-readkey
perl-test-cleannamespaces
perl-test-deep
perl-test-differences
perl-test-exception
perl-test-fatal
perl-test-memory-cycle
perl-test-most
perl-test-needs
perl-test-requires
perl-test-requiresinternet
perl-test-warn
perl-test-warnings
perl-text-csv
perl-text-diff
perl-text-simpletable
perl-text-soundex	perl-text-soundex: new package (#8279 )	2018-05-25 14:00:12 -05:00
perl-text-unidecode
perl-time-hires
perl-time-piece
perl-try-tiny
perl-uri
perl-uri-escape
perl-version	Further improvements to version parsing	2018-07-25 23:10:10 -07:00
perl-want
perl-www-robotrules
perl-xml-libxml
perl-xml-parser
perl-xml-parser-lite
perl-xml-simple
perl-yaml-libyaml
petsc	Add top-level attributes for git M-P packages	2018-07-25 23:10:10 -07:00
pexsi	Update and Bugfix for pexsi/package.py (#8822 )	2018-08-02 11:24:57 -05:00
pfft
pflotran	Add top-level attributes for git M-P packages	2018-07-25 23:10:10 -07:00
pfunit	pfunit: update (#7994 )	2018-05-03 17:02:20 -05:00
pgdspider
pgi	Bump pgi to 18.4. (#7980 )	2018-05-03 10:12:17 -05:00
pgmath	All git URLs end in .git	2018-07-25 23:10:10 -07:00
phantompeakqualtools
phast	New package: phast (#7993 )	2018-06-04 13:22:47 -05:00
phasta	Add top-level attributes for git M-P packages	2018-07-25 23:10:10 -07:00
phist	Add top-level attributes for git M-P packages	2018-07-25 23:10:10 -07:00
phylip
picard	Add missing expand=False for v2.18.3 (#8342 )	2018-05-31 20:24:33 -05:00
pidx	Add top-level attributes for git M-P packages	2018-07-25 23:10:10 -07:00
pigz	Use GitHub URL for pigz, supports > 1 release (#8339 )	2018-05-31 20:28:08 -05:00
pilon
pindel
piranha	Replace git=git with explicit branch names	2018-07-25 23:10:10 -07:00
pism	Add top-level attributes for git M-P packages	2018-07-25 23:10:10 -07:00
pixman	Fixed linking of R with MKL + configure issue in a dep (pixman) (#8449 )	2018-06-22 08:03:47 -05:00
pkg-config
pkgconf	Add pkgconf 1.4.2 (#8256 )	2018-05-23 13:27:39 -05:00
planck-likelihood	style: bring packages in compliance with pep8-naming	2018-07-19 00:41:36 -07:00
plasma	Add top-level attributes for hg, svn, and git A-L packages	2018-07-25 23:10:10 -07:00
platypus	style: bring packages in compliance with pep8-naming	2018-07-19 00:41:36 -07:00
plink	plink: new source version 1.9-beta5 (#8076 )	2018-05-12 18:38:22 -05:00
plplot	GDL and missing dependencies (#8283 )	2018-06-08 08:35:28 -05:00
plumed	plumed: added versions 2.4.1 and 2.3.5 (#8297 )	2018-05-28 08:01:51 -05:00
pmgr-collective
pmix	pmix: add 1.2.5 and 2.0.3 bug fix releases (#8097 )	2018-05-11 21:58:29 -05:00
pnfft	Added gsl dependency to pnfft (#8255 )	2018-05-24 16:24:47 -05:00
pngwriter	Add top-level attributes for git M-P packages	2018-07-25 23:10:10 -07:00
pnmpi
poamsa
pocl	Replace git=git with explicit branch names	2018-07-25 23:10:10 -07:00
polymake
poppler	All git URLs end in .git	2018-07-25 23:10:10 -07:00
poppler-data	Add missing dependencies to poppler package (#8220 )	2018-05-21 15:58:51 -05:00
porta
portage	Add top-level attributes for git M-P packages	2018-07-25 23:10:10 -07:00
postgresql
ppl
prank
precice	Add top-level attributes for git M-P packages	2018-07-25 23:10:10 -07:00
presentproto
preseq
price
primer3
prinseq-lite	prinseq-lite: Create new package (#7873 )	2018-04-23 16:11:27 -05:00
printproto
prng	Add new package: prng (#8396 )	2018-06-06 12:07:16 -05:00
probconsrna
prodigal
proj	Add PROJ 5.0.1 (#8233 )	2018-05-23 13:29:08 -05:00
protobuf	Add 3.5.2; Add optional cpp implementation enable for py-protobuf (#8069 )	2018-05-09 20:52:39 -05:00
proxymngr
pruners-ninja
ps-lite	Add top-level attributes for git M-P packages	2018-07-25 23:10:10 -07:00
psi4
pslib	GDL and missing dependencies (#8283 )	2018-06-08 08:35:28 -05:00
psm	Add top-level attributes for git M-P packages	2018-07-25 23:10:10 -07:00
psmc	Add top-level attributes for git M-P packages	2018-07-25 23:10:10 -07:00
pstreams
pugixml
pumi	Add top-level attributes for git M-P packages	2018-07-25 23:10:10 -07:00
pv	pv: initial commit (#8147 )	2018-05-17 15:40:54 -05:00
pvm
pxz	Replace git=git with explicit branch names	2018-07-25 23:10:10 -07:00
py-3to2
py-4suite-xml
py-abipy
py-adios	Add top-level attributes for git M-P packages	2018-07-25 23:10:10 -07:00
py-affine
py-alabaster
py-apache-libcloud
py-apipkg
py-appdirs
py-appnope
py-apscheduler
py-argcomplete
py-argparse
py-ase
py-asn1crypto
py-astroid
py-astropy
py-attrs	Add dependencies for py-dask (#8120 )	2018-05-16 22:54:33 -05:00
py-autopep8
py-avro	added avro and avro_json_serializer python packages (#8351 )	2018-06-01 15:06:27 -05:00
py-avro-json-serializer	added avro and avro_json_serializer python packages (#8351 )	2018-06-01 15:06:27 -05:00
py-babel
py-backcall	Add py-backcall (#8701 )	2018-07-13 10:59:02 -05:00
py-backports-abc
py-backports-functools-lru-cache	Remove unnecessary version-specific URL overrides (#8693 )	2018-07-12 07:28:11 +02:00
py-backports-shutil-get-terminal-size	views: packages can customize how they're added to views (#7152 )	2018-06-26 16:14:05 -07:00
py-backports-ssl-match-hostname	views: packages can customize how they're added to views (#7152 )	2018-06-26 16:14:05 -07:00
py-basemap
py-bcbio-gff
py-beautifulsoup4
py-binwalk
py-biom-format
py-biopython
py-bitarray
py-bitstring
py-bleach
py-blessings
py-bokeh
py-boltons
py-bottleneck
py-breakseq2
py-brian
py-brian2	add commented test dependencies (#8407 )	2018-06-07 10:33:59 -05:00
py-bsddb3	py-bsddb3: update (#8006 )	2018-05-03 19:20:14 -05:00
py-bx-python
py-cartopy	add package py-cartopy and dependencies (#8406 )	2018-06-07 08:10:39 -05:00
py-cclib
py-cdat-lite
py-cdo
py-certifi
py-cffi	added py-cffi 1.11.5 (#8349 )	2018-06-01 13:13:33 -05:00
py-chardet
py-checkm-genome
py-cheetah	new packages: workrave and its dependencies (#7753 )	2018-06-21 18:25:26 -07:00
py-click
py-cligj
py-cloudpickle	Add dependencies for py-dask (#8120 )	2018-05-16 22:54:33 -05:00
py-cnvkit	Py cnvkit: updating dependencies (#8057 )	2018-05-08 17:54:15 -05:00
py-cogent
py-colorama
py-colormath
py-configparser
py-counter
py-coverage
py-cpuinfo
py-crispresso	py-crispresso: Create new package (#7990 )	2018-05-03 13:09:59 -05:00
py-crossmap
py-cryptography
py-csvkit
py-current
py-cutadapt	py-cutadapt: needs py-setuptools at runtime (#8689 )	2018-07-11 14:53:35 -05:00
py-cvxopt
py-cycler
py-cython	py-cython: added version 0.28.3 (#8379 )	2018-06-05 13:36:29 -05:00
py-dask	Add dependencies for py-dask (#8120 )	2018-05-16 22:54:33 -05:00
py-dateutil
py-dbf
py-decorator
py-deeptools
py-dendropy
py-dill
py-discover
py-dlcpar	py-dlcpar: Add package description (#8032 )	2018-05-07 06:44:16 -05:00
py-docopt	Add py-docopt package (#8236 )	2018-05-22 10:49:12 -05:00
py-docutils
py-doxypy
py-doxypypy
py-dryscrape	Add top-level attributes for git M-P packages	2018-07-25 23:10:10 -07:00
py-dxchange
py-dxfile
py-easybuild-easyblocks
py-easybuild-easyconfigs
py-easybuild-framework
py-edffile	Add top-level attributes for git M-P packages	2018-07-25 23:10:10 -07:00
py-editdistance
py-elasticsearch
py-elephant	add commented test dependencies (#8407 )	2018-06-07 10:33:59 -05:00
py-emcee
py-entrypoints
py-enum34
py-epydoc
py-espresso	Add top-level attributes for git M-P packages	2018-07-25 23:10:10 -07:00
py-espressopp	Add top-level attributes for git M-P packages	2018-07-25 23:10:10 -07:00
py-et-xmlfile
py-eventlet
py-execnet
py-fastaindex
py-fasteners
py-faststructure
py-fiscalyear	Add top-level attributes for git M-P packages	2018-07-25 23:10:10 -07:00
py-flake8	add commented test dependencies (#8407 )	2018-06-07 10:33:59 -05:00
py-flake8-polyfill	add py-pep8-naming package	2018-07-19 00:41:36 -07:00
py-flask
py-flask-compress
py-flask-socketio
py-flexx
py-fn	py-fn: new package (#8705 )	2018-07-13 20:31:39 -05:00
py-fparser	Add top-level attributes for git M-P packages	2018-07-25 23:10:10 -07:00
py-funcsigs
py-functools32
py-future
py-futures
py-gdbgui
py-genders
py-genshi
py-gevent
py-git2
py-git-review
py-gnuplot
py-goatools
py-gpaw
py-greenlet
py-griddataformats
py-guidata
py-guiqwt
py-h5py
py-html2text
py-html5lib
py-htseq
py-httpbin
py-hypothesis
py-idna
py-igraph
py-illumina-utils
py-imageio	Add py-imageio for python3 (#8553 )	2018-06-26 12:55:10 -05:00
py-imagesize
py-iminuit
py-importlib
py-ipaddress
py-ipdb
py-ipykernel
py-ipython
py-ipython-genutils
py-ipywidgets
py-isort
py-itsdangerous
py-jdcal
py-jedi
py-jinja2
py-joblib
py-jpype
py-jsonschema
py-junit-xml
py-jupyter-client
py-jupyter-console
py-jupyter-core
py-jupyter-notebook
py-keras
py-kiwisolver
py-lark-parser	Py-lark-parser: new package (#8761 )	2018-07-19 14:00:19 -05:00
py-latexcodec
py-lazy
py-lazy-object-proxy
py-lazy-property	Adding lazy property python module (#47 ) (#8867 )	2018-08-02 11:44:16 -05:00
py-lazyarray
py-libconf
py-libensemble	Add top-level attributes for git M-P packages	2018-07-25 23:10:10 -07:00
py-line-profiler
py-linecache2
py-lit
py-llvmlite	Update py-llvmlite to reflect llvm@6 requirement for versions >0.23.0 (#8109 )	2018-05-14 11:26:01 -05:00
py-lmfit
py-localcider
py-locket	Add dependencies for py-dask (#8120 )	2018-05-16 22:54:33 -05:00
py-lockfile
py-logilab-common
py-lrudict
py-lxml
py-lzstring
py-macholib
py-machotools
py-macs2
py-maestrowf
py-mako	add commented test dependencies (#8407 )	2018-06-07 10:33:59 -05:00
py-mappy
py-markdown
py-markupsafe
py-matplotlib	add commented test dependencies (#8407 )	2018-06-07 10:33:59 -05:00
py-mccabe	add commented test dependencies (#8407 )	2018-06-07 10:33:59 -05:00
py-mdanalysis
py-meep
py-memory-profiler
py-methylcode
py-mg-rast-tools	Add top-level attributes for git M-P packages	2018-07-25 23:10:10 -07:00
py-misopy
py-mistune
py-mock
py-moltemplate
py-mongo
py-monotonic
py-monty
py-more-itertools	py-more-itertools: new package (#8004 )	2018-05-04 16:27:14 -05:00
py-mpi4py	Add top-level attributes for git M-P packages	2018-07-25 23:10:10 -07:00
py-mpmath	py-mpmath: added version 1.0.0 (#8382 )	2018-06-06 07:59:53 -05:00
py-multiprocess
py-multiqc
py-mx
py-mxnet
py-myhdl
py-mysqldb1
py-natsort
py-nbconvert
py-nbformat
py-neo
py-nestle
py-netcdf4
py-netifaces
py-networkx
py-nose
py-nosexcover
py-numba	Updated llvm to version 6.0.1. The previous 6.0.0 had an incorrectly … (#8801 )	2018-07-26 17:47:18 -05:00
py-numexpr	update version for numexpr (#8702 )	2018-07-13 15:50:21 -05:00
py-numexpr3	Add numexpr 3 (#8107 )	2018-05-14 09:46:14 -05:00
py-numpy	py-numpy: Add CPATH in modulefile (#8466 )	2018-07-26 17:50:00 -05:00
py-numpydoc
py-olefile
py-ont-fast5-api
py-openpmd-validator
py-openpyxl
py-openslide-python	A new package: py-openslide-python. (#7907 )	2018-05-03 08:37:52 -05:00
py-opentuner	Add top-level attributes for git M-P packages	2018-07-25 23:10:10 -07:00
py-ordereddict
py-oset
py-owslib	add package py-cartopy and dependencies (#8406 )	2018-06-07 08:10:39 -05:00
py-packaging
py-palettable
py-pandas
py-paramiko
py-partd	Add dependencies for py-dask (#8120 )	2018-05-16 22:54:33 -05:00
py-pathlib2
py-pathos
py-pathspec
py-patsy	add commented test dependencies (#8407 )	2018-06-07 10:33:59 -05:00
py-pbr
py-pep8-naming	add py-pep8-naming package	2018-07-19 00:41:36 -07:00
py-perf
py-performance
py-periodictable
py-petsc4py
py-pexpect
py-phonopy
py-pickleshare
py-pil
py-pillow	Updating py-pillow with change in checksum for version 5.1.0. (#8547 )	2018-06-22 18:02:27 -05:00
py-pip	Added py-pip 10.0.1 and py-setuptools 39.2.0 (#8377 )	2018-06-05 13:36:09 -05:00
py-pipits
py-pkgconfig	py-pkgconfig: Made nose dependency type=build,test instead of just type=test, to prevent setuptools from silently installing its own copy of nose (#8749 )	2018-07-18 21:42:04 -05:00
py-plotly
py-pluggy	Add dependencies for py-dask (#8120 )	2018-05-16 22:54:33 -05:00
py-ply	py-ply: added version 3.11 (#8383 )	2018-07-11 22:21:55 +02:00
py-pmw
py-poster	py-mg-rast-tools: Create new package and its dependencies. (#7816 )	2018-04-21 10:28:44 -05:00
py-pox
py-ppft
py-prettytable
py-proj	Add top-level attributes for git M-P packages	2018-07-25 23:10:10 -07:00
py-projectq	Add top-level attributes for git M-P packages	2018-07-25 23:10:10 -07:00
py-prompt-toolkit
py-protobuf	Add 3.5.2; Add optional cpp implementation enable for py-protobuf (#8069 )	2018-05-09 20:52:39 -05:00
py-psutil	modified: var/spack/repos/builtin/packages/py-psutil/package.py (#8420 )	2018-06-07 10:26:48 -05:00
py-psyclone	Add top-level attributes for git M-P packages	2018-07-25 23:10:10 -07:00
py-ptyprocess
py-pudb
py-py	Add dependencies for py-dask (#8120 )	2018-05-16 22:54:33 -05:00
py-py2bit
py-py2cairo	add commented test dependencies (#8407 )	2018-06-07 10:33:59 -05:00
py-py2neo
py-py4j
py-pyani
py-pyasn1
py-pybedtools
py-pybigwig
py-pybind11	Add top-level attributes for git M-P packages	2018-07-25 23:10:10 -07:00
py-pybtex
py-pybtex-docutils
py-pychecker
py-pycodestyle
py-pycparser	pycparser: add version 2.18 (#8760 )	2018-07-19 12:49:05 -05:00
py-pycrypto
py-pycurl
py-pydatalog
py-pydispatcher
py-pydot
py-pyelftools
py-pyepsg	add package py-cartopy and dependencies (#8406 )	2018-06-07 08:10:39 -05:00
py-pyfaidx
py-pyfasta
py-pyfftw
py-pyflakes
py-pygdbmi
py-pygments
py-pygobject
py-pygpu
py-pygtk
py-pylint	Further improvements to version parsing	2018-07-25 23:10:10 -07:00
py-pymatgen
py-pyminifier
py-pymol	py-pymol: new package (#7823 )	2018-04-21 10:28:09 -05:00
py-pympler
py-pynn	Add top-level attributes for git M-P packages	2018-07-25 23:10:10 -07:00
py-pypar
py-pyparsing
py-pypeflow	Add top-level attributes for git M-P packages	2018-07-25 23:10:10 -07:00
py-pyprof2html
py-pyqi	py-pyqi: new package (#8726 )	2018-07-17 16:07:38 -05:00
py-pyqt
py-pyrad
py-pysam	Bump pysam to 0.14.1. (#7988 )	2018-05-04 22:11:26 -05:00
py-pyscaf
py-pyserial	Fix base class for py-pyserial (#8633 )	2018-07-02 22:47:56 -05:00
py-pyshp	add package py-cartopy and dependencies (#8406 )	2018-06-07 08:10:39 -05:00
py-pyside	py-pyside: update (#8002 )	2018-05-03 16:50:55 -05:00
py-pysocks
py-pysqlite	py-pysqlite: Create new package (#8042 )	2018-05-07 13:42:24 -05:00
py-pytables
py-pytest	py-pytest: Added dependency on py-setuptools-scm, as well as py-setup… (#8750 )	2018-07-18 22:52:44 -05:00
py-pytest-cov
py-pytest-flake8
py-pytest-httpbin
py-pytest-mock
py-pytest-runner
py-pytest-xdist
py-python-daemon
py-python-engineio
py-python-gitlab
py-python-levenshtein
py-python-socketio
py-pythonqwt
py-pytorch	Add top-level attributes for git M-P packages	2018-07-25 23:10:10 -07:00
py-pytz
py-pyutilib
py-pyvcf
py-pywavelets
py-pyyaml
py-qtawesome
py-qtconsole	add commented test dependencies (#8407 )	2018-06-07 10:33:59 -05:00
py-qtpy
py-quantities
py-quast
py-radical-utils
py-ranger
py-rasterio
py-readme-renderer
py-regex
py-reportlab
py-requests	add commented test dependencies (#8407 )	2018-06-07 10:33:59 -05:00
py-requests-toolbelt	py-mg-rast-tools: Create new package and its dependencies. (#7816 )	2018-04-21 10:28:44 -05:00
py-restview
py-rope
py-rpy2	added rpy2 2.9.4 and added py-jinja2 dependency (#8645 )	2018-07-05 21:33:32 -05:00
py-rsa
py-rseqc
py-rtree
py-saga-python
py-scandir
py-scientificpython
py-scikit-image
py-scikit-learn	py-scikit-learn: added version 0.19.1 and updated dependencies (#8399 )	2018-06-06 07:41:48 -05:00
py-scipy	Remove unnecessary version-specific URL overrides (#8693 )	2018-07-12 07:28:11 +02:00
py-seaborn
py-setuptools	Added py-pip 10.0.1 and py-setuptools 39.2.0 (#8377 )	2018-06-05 13:36:09 -05:00
py-setuptools-git
py-setuptools-scm
py-sfepy
py-sh
py-shapely	add package py-cartopy and dependencies (#8406 )	2018-06-07 08:10:39 -05:00
py-shiboken
py-simplegeneric
py-simplejson
py-singledispatch
py-sip
py-six
py-slepc4py
py-slurm-pipeline
py-sncosmo
py-snowballstemmer
py-snuggs	py-snuggs: Added depends_on py-parsing. The build uses setuptools, which would otherwise silently try to install pyparsing itself, presumably into the python home dir (obviously not ideal). (#8748 )	2018-07-18 21:42:57 -05:00
py-spectra
py-spefile	Add top-level attributes for git M-P packages	2018-07-25 23:10:10 -07:00
py-spglib
py-sphinx	add commented test dependencies (#8407 )	2018-06-07 10:33:59 -05:00
py-sphinx-bootstrap-theme
py-sphinx-rtd-theme
py-sphinxcontrib-bibtex
py-sphinxcontrib-programoutput
py-sphinxcontrib-websupport	add commented test dependencies (#8407 )	2018-06-07 10:33:59 -05:00
py-spyder
py-spykeutils
py-sqlalchemy
py-statsmodels
py-stevedore
py-storm
py-subprocess32
py-symengine	Replace git=git with explicit branch names	2018-07-25 23:10:10 -07:00
py-symfit
py-sympy	py-sympy: added version 1.1.1 (#8381 )	2018-06-05 13:42:18 -05:00
py-tabulate
py-tappy
py-terminado
py-testinfra	py-testinfra: Add versions 1.12.0 and 1.13.0 (#8222 )	2018-05-21 15:57:25 -05:00
py-tetoolkit
py-theano	Add top-level attributes for git M-P packages	2018-07-25 23:10:10 -07:00
py-tifffile
py-toml
py-tomopy
py-toolz	Add dependencies for py-dask (#8120 )	2018-05-16 22:54:33 -05:00
py-tornado
py-tqdm
py-traceback2
py-traitlets
py-tuiview
py-twisted
py-typing
py-tzlocal
py-udunits	py-udunits: New package (#7998 )	2018-05-05 17:33:44 -05:00
py-umi-tools
py-unittest2
py-unittest2py3k
py-urllib3
py-urwid
py-vcversioner
py-virtualenv	py-virtualenv: added version 16.0.0 (#8380 )	2018-06-05 13:35:43 -05:00
py-virtualenv-clone
py-virtualenvwrapper
py-vmd-python	added py-setuptools as dependency (#8843 )	2018-08-02 11:24:26 -05:00
py-vsc-base
py-vsc-install
py-wcsaxes
py-wcwidth
py-webkit-server	Add top-level attributes for git M-P packages	2018-07-25 23:10:10 -07:00
py-weblogo	new package: py-weblogo (#7886 )	2018-04-24 19:31:37 -07:00
py-werkzeug
py-wheel
py-widgetsnbextension
py-wrapt
py-xarray
py-xattr	Add top-level attributes for git M-P packages	2018-07-25 23:10:10 -07:00
py-xlrd
py-xlsxwriter
py-xmlrunner
py-xopen
py-xpyb
py-xvfbwrapper
py-yamlreader	py-yamlreader: new package (#7997 )	2018-05-03 16:58:40 -05:00
py-yapf
py-yt	Add top-level attributes for git M-P packages	2018-07-25 23:10:10 -07:00
py-zmq
py-zope-event	Add dependencies for py-dask (#8120 )	2018-05-16 22:54:33 -05:00
py-zope-interface	Add dependencies for py-dask (#8120 )	2018-05-16 22:54:33 -05:00
python	Add Python 3.7.0 (#8619 )	2018-06-29 16:25:39 -05:00
qbank
qbox
qhull
qmcpack	Add top-level attributes for git M-P packages	2018-07-25 23:10:10 -07:00
qmd-progress	Add top-level attributes for git M-P packages	2018-07-25 23:10:10 -07:00
qorts	r-qorts: Create new package. (#8744 )	2018-07-19 17:58:36 -05:00
qrupdate
qt	fix qt@5.8: build on systems without wayland (#8417 )	2018-06-07 10:50:05 -05:00
qt-creator
qtgraph	Add top-level attributes for git M-P packages	2018-07-25 23:10:10 -07:00
qthreads
quantum-espresso	Further improvements to version parsing	2018-07-25 23:10:10 -07:00
quinoa	Add top-level attributes for git M-P packages	2018-07-25 23:10:10 -07:00
qwt
r	style: bring packages in compliance with pep8-naming	2018-07-19 00:41:36 -07:00
r-a4	Add top-level attributes for git R (Bioconductor) packages	2018-07-25 23:10:10 -07:00
r-a4base	Add top-level attributes for git R (Bioconductor) packages	2018-07-25 23:10:10 -07:00
r-a4classif	Add top-level attributes for git R (Bioconductor) packages	2018-07-25 23:10:10 -07:00
r-a4core	Add top-level attributes for git R (Bioconductor) packages	2018-07-25 23:10:10 -07:00
r-a4preproc	Add top-level attributes for git R (Bioconductor) packages	2018-07-25 23:10:10 -07:00
r-a4reporting	Add top-level attributes for git R (Bioconductor) packages	2018-07-25 23:10:10 -07:00
r-abadata
r-abaenrichment	Add top-level attributes for git R (Bioconductor) packages	2018-07-25 23:10:10 -07:00
r-abind
r-absseq	Add top-level attributes for git R (Bioconductor) packages	2018-07-25 23:10:10 -07:00
r-acde
r-acepack
r-acgh	Add top-level attributes for git R (Bioconductor) packages	2018-07-25 23:10:10 -07:00
r-acme	Add top-level attributes for git R (Bioconductor) packages	2018-07-25 23:10:10 -07:00
r-ada
r-adabag
r-ade4
r-adegenet
r-adsplit	Add top-level attributes for git R (Bioconductor) packages	2018-07-25 23:10:10 -07:00
r-aer	r-aer: a new package. (#8567 )	2018-06-28 15:40:00 -05:00
r-affxparser	Add top-level attributes for git R (Bioconductor) packages	2018-07-25 23:10:10 -07:00
r-affy	Add top-level attributes for git R (Bioconductor) packages	2018-07-25 23:10:10 -07:00
r-affycomp	Add top-level attributes for git R (Bioconductor) packages	2018-07-25 23:10:10 -07:00
r-affycompatible	Add top-level attributes for git R (Bioconductor) packages	2018-07-25 23:10:10 -07:00
r-affycontam	Add top-level attributes for git R (Bioconductor) packages	2018-07-25 23:10:10 -07:00
r-affycoretools	Add top-level attributes for git R (Bioconductor) packages	2018-07-25 23:10:10 -07:00
r-affydata
r-affyexpress	Add top-level attributes for git R (Bioconductor) packages	2018-07-25 23:10:10 -07:00
r-affyilm	Add top-level attributes for git R (Bioconductor) packages	2018-07-25 23:10:10 -07:00
r-affyio	Add top-level attributes for git R (Bioconductor) packages	2018-07-25 23:10:10 -07:00
r-affypdnn	Add top-level attributes for git R (Bioconductor) packages	2018-07-25 23:10:10 -07:00
r-affyplm	Add top-level attributes for git R (Bioconductor) packages	2018-07-25 23:10:10 -07:00
r-affyqcreport	Add top-level attributes for git R (Bioconductor) packages	2018-07-25 23:10:10 -07:00
r-affyrnadegradation	Add top-level attributes for git R (Bioconductor) packages	2018-07-25 23:10:10 -07:00
r-agdex	Add top-level attributes for git R (Bioconductor) packages	2018-07-25 23:10:10 -07:00
r-agilp	Add top-level attributes for git R (Bioconductor) packages	2018-07-25 23:10:10 -07:00
r-agimicrorna	Add top-level attributes for git R (Bioconductor) packages	2018-07-25 23:10:10 -07:00
r-aims	Add top-level attributes for git R (Bioconductor) packages	2018-07-25 23:10:10 -07:00
r-aldex2	Add top-level attributes for git R (Bioconductor) packages	2018-07-25 23:10:10 -07:00
r-allelicimbalance	Add top-level attributes for git R (Bioconductor) packages	2018-07-25 23:10:10 -07:00
r-alpine	Add top-level attributes for git R (Bioconductor) packages	2018-07-25 23:10:10 -07:00
r-als
r-alsace	Add top-level attributes for git R (Bioconductor) packages	2018-07-25 23:10:10 -07:00
r-altcdfenvs	Add top-level attributes for git R (Bioconductor) packages	2018-07-25 23:10:10 -07:00
r-ampliqueso	Add top-level attributes for git R (Bioconductor) packages	2018-07-25 23:10:10 -07:00
r-analysispageserver	Add top-level attributes for git R (Bioconductor) packages	2018-07-25 23:10:10 -07:00
r-anaquin	Add top-level attributes for git R (Bioconductor) packages	2018-07-25 23:10:10 -07:00
r-aneufinder	Add top-level attributes for git R (Bioconductor) packages	2018-07-25 23:10:10 -07:00
r-aneufinderdata	Add top-level attributes for git R (Bioconductor) packages	2018-07-25 23:10:10 -07:00
r-annaffy	Add top-level attributes for git R (Bioconductor) packages	2018-07-25 23:10:10 -07:00
r-annotate	Add top-level attributes for git R (Bioconductor) packages	2018-07-25 23:10:10 -07:00
r-annotationdbi	Add top-level attributes for git R (Bioconductor) packages	2018-07-25 23:10:10 -07:00
r-annotationfilter	Add top-level attributes for git R (Bioconductor) packages	2018-07-25 23:10:10 -07:00
r-annotationforge	Add top-level attributes for git R (Bioconductor) packages	2018-07-25 23:10:10 -07:00
r-annotationhub	Add top-level attributes for git R (Bioconductor) packages	2018-07-25 23:10:10 -07:00
r-ape
r-assertthat
r-backports
r-bamsignals	Add top-level attributes for git R (Bioconductor) packages	2018-07-25 23:10:10 -07:00
r-base64
r-base64enc
r-bbmisc	Additional r packages (#7892 )	2018-04-25 20:59:46 -05:00
r-beanplot
r-bh
r-bindr
r-bindrcpp
r-biobase	Add top-level attributes for git R (Bioconductor) packages	2018-07-25 23:10:10 -07:00
r-biocgenerics	Add top-level attributes for git R (Bioconductor) packages	2018-07-25 23:10:10 -07:00
r-biocinstaller	Add top-level attributes for git R (Bioconductor) packages	2018-07-25 23:10:10 -07:00
r-biocparallel	Add top-level attributes for git R (Bioconductor) packages	2018-07-25 23:10:10 -07:00
r-biocstyle	Add top-level attributes for git R (Bioconductor) packages	2018-07-25 23:10:10 -07:00
r-biom-utils	py-mg-rast-tools: Create new package and its dependencies. (#7816 )	2018-04-21 10:28:44 -05:00
r-biomart	Add top-level attributes for git R (Bioconductor) packages	2018-07-25 23:10:10 -07:00
r-biomformat	Add top-level attributes for git R (Bioconductor) packages	2018-07-25 23:10:10 -07:00
r-biostrings	Add top-level attributes for git R (Bioconductor) packages	2018-07-25 23:10:10 -07:00
r-biovizbase	Add top-level attributes for git R (Bioconductor) packages	2018-07-25 23:10:10 -07:00
r-bit
r-bit64
r-bitops
r-blob
r-bookdown
r-boot
r-brew
r-broom
r-bsgenome	Add top-level attributes for git R (Bioconductor) packages	2018-07-25 23:10:10 -07:00
r-bumphunter	Add top-level attributes for git R (Bioconductor) packages	2018-07-25 23:10:10 -07:00
r-c50
r-callr
r-car
r-caret
r-category	Add top-level attributes for git R (Bioconductor) packages	2018-07-25 23:10:10 -07:00
r-catools
r-cdcfluview	r-cdcfluview: new package (#8089 )	2018-05-12 18:28:18 -05:00
r-cellranger
r-cghflasso	r-cghflasso v0 2 1 - new package (#8177 )	2018-05-21 16:12:35 -05:00
r-checkmate
r-checkpoint
r-chemometrics
r-chron
r-circlize
r-class
r-classint
r-cli
r-clipr
r-cluster	Further improvements to version parsing	2018-07-25 23:10:10 -07:00
r-clusterprofiler	Add top-level attributes for git R (Bioconductor) packages	2018-07-25 23:10:10 -07:00
r-cner	Add top-level attributes for git R (Bioconductor) packages	2018-07-25 23:10:10 -07:00
r-coda
r-codetools
r-coin
r-colorspace
r-complexheatmap	Add top-level attributes for git R (Bioconductor) packages	2018-07-25 23:10:10 -07:00
r-corpcor
r-corrplot
r-covr
r-cowplot
r-crayon
r-crosstalk
r-cubature
r-cubist
r-curl
r-data-table
r-dbi
r-dbplyr
r-delayedarray	Add top-level attributes for git R (Bioconductor) packages	2018-07-25 23:10:10 -07:00
r-deldir
r-dendextend
r-deoptim
r-deoptimr
r-deseq	Add top-level attributes for git R (Bioconductor) packages	2018-07-25 23:10:10 -07:00
r-deseq2	Add top-level attributes for git R (Bioconductor) packages	2018-07-25 23:10:10 -07:00
r-desolve
r-devtools
r-diagrammer
r-dicekriging	Additional r packages (#7892 )	2018-04-25 20:59:46 -05:00
r-dichromat
r-diffusionmap
r-digest
r-diptest
r-dirichletmultinomial	Add top-level attributes for git R (Bioconductor) packages	2018-07-25 23:10:10 -07:00
r-dismo	R dismo 1 1 4 - new package (#8176 )	2018-05-17 19:50:19 -05:00
r-dnacopy	Add top-level attributes for git R (Bioconductor) packages	2018-07-25 23:10:10 -07:00
r-do-db
r-domc
r-doparallel
r-dorng
r-dose	Add top-level attributes for git R (Bioconductor) packages	2018-07-25 23:10:10 -07:00
r-downloader
r-dplyr
r-dt
r-dtw
r-dygraphs
r-e1071
r-edger	Add top-level attributes for git R (Bioconductor) packages	2018-07-25 23:10:10 -07:00
r-ellipse
r-ensembldb	Add top-level attributes for git R (Bioconductor) packages	2018-07-25 23:10:10 -07:00
r-ergm
r-evaluate
r-expm
r-factoextra
r-factominer
r-fastmatch
r-ff
r-fftwtools
r-fgsea	Add top-level attributes for git R (Bioconductor) packages	2018-07-25 23:10:10 -07:00
r-filehash
r-fit-models	r-fit-models: Create new package (#8122 )	2018-05-14 16:50:54 -05:00
r-flashclust
r-flexclust
r-flexmix
r-fnn
r-forcats
r-foreach
r-forecast
r-foreign
r-formatr
r-formula
r-fpc
r-fracdiff
r-futile-logger
r-futile-options	Add list_url to allow download of prior versions from cran archive (#8141 )	2018-05-15 22:10:20 -05:00
r-gbm
r-gcrma	Add top-level attributes for git R (Bioconductor) packages	2018-07-25 23:10:10 -07:00
r-gdata
r-gdsfmt	Add top-level attributes for git R (Bioconductor) packages	2018-07-25 23:10:10 -07:00
r-geiger
r-genefilter	Add top-level attributes for git R (Bioconductor) packages	2018-07-25 23:10:10 -07:00
r-geneplotter	Add top-level attributes for git R (Bioconductor) packages	2018-07-25 23:10:10 -07:00
r-genie3	Add top-level attributes for git R (Bioconductor) packages	2018-07-25 23:10:10 -07:00
r-genomeinfodb	Add top-level attributes for git R (Bioconductor) packages	2018-07-25 23:10:10 -07:00
r-genomeinfodbdata
r-genomicalignments	Add top-level attributes for git R (Bioconductor) packages	2018-07-25 23:10:10 -07:00
r-genomicfeatures	Add top-level attributes for git R (Bioconductor) packages	2018-07-25 23:10:10 -07:00
r-genomicranges	Add top-level attributes for git R (Bioconductor) packages	2018-07-25 23:10:10 -07:00
r-geomorph
r-geoquery	Add top-level attributes for git R (Bioconductor) packages	2018-07-25 23:10:10 -07:00
r-geosphere
r-getopt
r-getoptlong
r-ggally
r-ggbio	Add top-level attributes for git R (Bioconductor) packages	2018-07-25 23:10:10 -07:00
r-ggdendro
r-ggjoy
r-ggmap
r-ggplot2
r-ggpubr
r-ggrepel
r-ggridges
r-ggsci
r-ggvis
r-gistr
r-git2r
r-glmnet
r-globaloptions
r-glue
r-gmodels
r-gmp
r-go-db
r-googlevis
r-gosemsim	Add top-level attributes for git R (Bioconductor) packages	2018-07-25 23:10:10 -07:00
r-gostats	Add top-level attributes for git R (Bioconductor) packages	2018-07-25 23:10:10 -07:00
r-gplots
r-graph	Add top-level attributes for git R (Bioconductor) packages	2018-07-25 23:10:10 -07:00
r-gridbase
r-gridextra
r-gseabase	Add top-level attributes for git R (Bioconductor) packages	2018-07-25 23:10:10 -07:00
r-gss
r-gsubfn
r-gtable
r-gtools
r-gtrellis	Add top-level attributes for git R (Bioconductor) packages	2018-07-25 23:10:10 -07:00
r-gviz	Add top-level attributes for git R (Bioconductor) packages	2018-07-25 23:10:10 -07:00
r-haven
r-hexbin
r-highr
r-hmisc
r-hms
r-htmltable
r-htmltools
r-htmlwidgets
r-httpuv
r-httr
r-hwriter
r-hypergraph	Add top-level attributes for git R (Bioconductor) packages	2018-07-25 23:10:10 -07:00
r-ica
r-igraph
r-illuminaio	Add top-level attributes for git R (Bioconductor) packages	2018-07-25 23:10:10 -07:00
r-impute	Add top-level attributes for git R (Bioconductor) packages	2018-07-25 23:10:10 -07:00
r-influencer
r-inline
r-interactivedisplaybase	Add top-level attributes for git R (Bioconductor) packages	2018-07-25 23:10:10 -07:00
r-ipred
r-iranges	Add top-level attributes for git R (Bioconductor) packages	2018-07-25 23:10:10 -07:00
r-irdisplay
r-irkernel	Add top-level attributes for git R (Bioconductor) packages	2018-07-25 23:10:10 -07:00
r-irlba
r-iso
r-iterators
r-janitor
r-jaspar2018	Add top-level attributes for git R (Bioconductor) packages	2018-07-25 23:10:10 -07:00
r-jomo	r-mitml: new package and its dependencies r-jomo and r-pan (#8412 )	2018-06-06 17:44:32 -05:00
r-jpeg
r-jsonlite
r-kegg-db
r-kegggraph	Add top-level attributes for git R (Bioconductor) packages	2018-07-25 23:10:10 -07:00
r-keggrest	Add top-level attributes for git R (Bioconductor) packages	2018-07-25 23:10:10 -07:00
r-kernlab
r-kernsmooth
r-kknn
r-knitr
r-labeling
r-lambda-r	Add list_url to allow download of prior versions from cran archive (#8141 )	2018-05-15 22:10:20 -05:00
r-laplacesdemon
r-lars
r-lattice
r-latticeextra
r-lava
r-lazyeval
r-leaflet
r-leaps
r-learnbayes
r-lhs	Additional r packages (#7892 )	2018-04-25 20:59:46 -05:00
r-limma	Add top-level attributes for git R (Bioconductor) packages	2018-07-25 23:10:10 -07:00
r-lme4
r-lmtest
r-locfit
r-log4r
r-lpsolve
r-lsei
r-lubridate
r-magic
r-magrittr
r-makecdfenv	Add top-level attributes for git R (Bioconductor) packages	2018-07-25 23:10:10 -07:00
r-maldiquant
r-mapproj
r-maps
r-maptools
r-markdown
r-mass
r-matr	py-mg-rast-tools: Create new package and its dependencies. (#7816 )	2018-04-21 10:28:44 -05:00
r-matrix
r-matrixmodels
r-matrixstats
r-mclust
r-mcmcglmm
r-mco	Additional r packages (#7892 )	2018-04-25 20:59:46 -05:00
r-mda
r-memoise
r-mergemaid	Add top-level attributes for git R (Bioconductor) packages	2018-07-25 23:10:10 -07:00
r-methodss3
r-mgcv
r-mgraster	py-mg-rast-tools: Create new package and its dependencies. (#7816 )	2018-04-21 10:28:44 -05:00
r-mice	r-mice: new package (#8423 )	2018-06-08 14:48:54 -05:00
r-mime
r-minfi	Add top-level attributes for git R (Bioconductor) packages	2018-07-25 23:10:10 -07:00
r-minqa
r-misc3d	Additional r packages (#7892 )	2018-04-25 20:59:46 -05:00
r-mitml	r-mitml: new package and its dependencies r-jomo and r-pan (#8412 )	2018-06-06 17:44:32 -05:00
r-mixtools
r-mlbench
r-mlinterfaces	Add top-level attributes for git R (Bioconductor) packages	2018-07-25 23:10:10 -07:00
r-mlr	Additional r packages (#7892 )	2018-04-25 20:59:46 -05:00
r-mlrmbo	Additional r packages (#7892 )	2018-04-25 20:59:46 -05:00
r-mmwrweek	r-mmwrweek: new pacakge (#8086 )	2018-05-10 17:32:58 -05:00
r-mnormt
r-modelmetrics
r-modelr
r-modeltools
r-mpm
r-msnbase	Add top-level attributes for git R (Bioconductor) packages	2018-07-25 23:10:10 -07:00
r-multcomp
r-multtest	Add top-level attributes for git R (Bioconductor) packages	2018-07-25 23:10:10 -07:00
r-munsell
r-mvtnorm
r-mzid	Add top-level attributes for git R (Bioconductor) packages	2018-07-25 23:10:10 -07:00
r-mzr	Add top-level attributes for git R (Bioconductor) packages	2018-07-25 23:10:10 -07:00
r-nanotime
r-ncbit
r-ncdf4
r-network
r-networkd3
r-nlme
r-nloptr
r-nmf
r-nnet
r-nnls
r-nor1mix
r-np
r-numderiv
r-oligoclasses	Add top-level attributes for git R (Bioconductor) packages	2018-07-25 23:10:10 -07:00
r-oo
r-openssl
r-org-hs-eg-db
r-organismdbi	Add top-level attributes for git R (Bioconductor) packages	2018-07-25 23:10:10 -07:00
r-packrat
r-pacman
r-pamr
r-pan	r-mitml: new package and its dependencies r-jomo and r-pan (#8412 )	2018-06-06 17:44:32 -05:00
r-parallelmap	Additional r packages (#7892 )	2018-04-25 20:59:46 -05:00
r-paramhelpers	Additional r packages (#7892 )	2018-04-25 20:59:46 -05:00
r-party
r-partykit
r-pathview	Add top-level attributes for git R (Bioconductor) packages	2018-07-25 23:10:10 -07:00
r-pbapply
r-pbdzmq
r-pbkrtest
r-pcamethods	Add top-level attributes for git R (Bioconductor) packages	2018-07-25 23:10:10 -07:00
r-pcapp
r-permute
r-pfam-db
r-phangorn
r-phantompeakqualtools
r-phyloseq	Add top-level attributes for git R (Bioconductor) packages	2018-07-25 23:10:10 -07:00
r-picante	r-picante: Create new package (#8117 )	2018-05-14 13:00:03 -05:00
r-pkgconfig
r-pkgmaker
r-plogr
r-plot3d	Additional r packages (#7892 )	2018-04-25 20:59:46 -05:00
r-plotly
r-plotrix
r-pls
r-plyr
r-pmcmr
r-png
r-powerlaw
r-prabclus
r-praise
r-preprocesscore	Add top-level attributes for git R (Bioconductor) packages	2018-07-25 23:10:10 -07:00
r-prettyunits
r-proc	r-proc v1 12 1 - New package (#8191 )	2018-05-19 11:26:44 -05:00
r-prodlim
r-progress
r-protgenerics	Add top-level attributes for git R (Bioconductor) packages	2018-07-25 23:10:10 -07:00
r-proto
r-proxy
r-pryr
r-psych
r-ptw
r-purrr
r-quadprog
r-quantmod
r-quantreg
r-quantro	Add top-level attributes for git R (Bioconductor) packages	2018-07-25 23:10:10 -07:00
r-qvalue	Add top-level attributes for git R (Bioconductor) packages	2018-07-25 23:10:10 -07:00
r-r6
r-randomforest
r-ranger
r-rappdirs
r-raster
r-rbgl	Add top-level attributes for git R (Bioconductor) packages	2018-07-25 23:10:10 -07:00
r-rbokeh
r-rcolorbrewer
r-rcpp	Bump r-rcpp versions. (#8016 )	2018-05-03 22:54:45 -05:00
r-rcpparmadillo
r-rcppblaze
r-rcppcctz
r-rcppcnpy	r-rcppcnpy: a new package. (#8139 )	2018-05-16 12:45:24 -05:00
r-rcppeigen	r-rstan: new version and dependents (#8158 )	2018-05-17 15:26:38 -05:00
r-rcppprogress
r-rcurl
r-rda	Further improvements to version parsing	2018-07-25 23:10:10 -07:00
r-readr
r-readxl
r-registry
r-rematch
r-reordercluster
r-reportingtools	Add top-level attributes for git R (Bioconductor) packages	2018-07-25 23:10:10 -07:00
r-repr
r-reprex
r-reshape
r-reshape2
r-rex
r-rgdal
r-rgenoud	Additional r packages (#7892 )	2018-04-25 20:59:46 -05:00
r-rgeos
r-rgl
r-rgooglemaps
r-rgraphviz	Add top-level attributes for git R (Bioconductor) packages	2018-07-25 23:10:10 -07:00
r-rhdf5	Add top-level attributes for git R (Bioconductor) packages	2018-07-25 23:10:10 -07:00
r-rhtslib	Replace git=git with explicit branch names	2018-07-25 23:10:10 -07:00
r-rinside	Additional r packages (#7892 )	2018-04-25 20:59:46 -05:00
r-rjags
r-rjava
r-rjson
r-rjsonio
r-rlang
r-rmarkdown
r-rminer
r-rmpfr
r-rmpi	style: bring packages in compliance with pep8-naming	2018-07-19 00:41:36 -07:00
r-rmysql
r-rngtools
r-robustbase
r-rocr
r-rodbc
r-roxygen2
r-rpart
r-rpart-plot
r-rpostgresql
r-rprojroot
r-rsamtools	Add top-level attributes for git R (Bioconductor) packages	2018-07-25 23:10:10 -07:00
r-rsnns
r-rsolnp
r-rsqlite	Further improvements to version parsing	2018-07-25 23:10:10 -07:00
r-rstan	r-rstan: new version and dependents (#8158 )	2018-05-17 15:26:38 -05:00
r-rstudioapi
r-rtracklayer	Add top-level attributes for git R (Bioconductor) packages	2018-07-25 23:10:10 -07:00
r-rtsne
r-rvcheck
r-rvest
r-rzmq
r-s4vectors	Add top-level attributes for git R (Bioconductor) packages	2018-07-25 23:10:10 -07:00
r-samr
r-sandwich
r-scales
r-scatterplot3d
r-sdmtools
r-segmented
r-selectr
r-seqinr
r-seqlogo	Add top-level attributes for git R (Bioconductor) packages	2018-07-25 23:10:10 -07:00
r-seurat
r-sf
r-sfsmisc	Further improvements to version parsing	2018-07-25 23:10:10 -07:00
r-shape
r-shiny
r-shinydashboard	r-shinydashboard: Create new package (#8116 )	2018-05-14 13:00:18 -05:00
r-shortread	Add top-level attributes for git R (Bioconductor) packages	2018-07-25 23:10:10 -07:00
r-siggenes	Add top-level attributes for git R (Bioconductor) packages	2018-07-25 23:10:10 -07:00
r-simpleaffy	Add top-level attributes for git R (Bioconductor) packages	2018-07-25 23:10:10 -07:00
r-smoof	Additional r packages (#7892 )	2018-04-25 20:59:46 -05:00
r-sn
r-snow
r-snowfall
r-snprelate	Add top-level attributes for git R (Bioconductor) packages	2018-07-25 23:10:10 -07:00
r-som
r-somaticsignatures	Add top-level attributes for git R (Bioconductor) packages	2018-07-25 23:10:10 -07:00
r-sourcetools
r-sp
r-sparsem
r-spatial	Further improvements to version parsing	2018-07-25 23:10:10 -07:00
r-spdep
r-speedglm
r-spem	Add top-level attributes for git R (Bioconductor) packages	2018-07-25 23:10:10 -07:00
r-splitstackshape	r-splitstackshape: Create new package. (#8370 )	2018-06-06 08:03:23 -05:00
r-sqldf
r-squash	r-squash: Create new package (#8118 )	2018-05-14 12:59:49 -05:00
r-stanheaders	r-rstan: new version and dependents (#8158 )	2018-05-17 15:26:38 -05:00
r-statmod
r-statnet-common
r-stringi
r-stringr
r-strucchange
r-subplex
r-summarizedexperiment	Add top-level attributes for git R (Bioconductor) packages	2018-07-25 23:10:10 -07:00
r-survey
r-survival
r-sva	Add top-level attributes for git R (Bioconductor) packages	2018-07-25 23:10:10 -07:00
r-tarifx
r-tclust
r-tensora
r-testit
r-testthat
r-tfbstools	Add top-level attributes for git R (Bioconductor) packages	2018-07-25 23:10:10 -07:00
r-tfmpvalue
r-th-data
r-threejs
r-tibble
r-tidycensus
r-tidyr
r-tidyselect
r-tidyverse
r-tiff
r-tigris
r-timedate
r-tmixclust	Add top-level attributes for git R (Bioconductor) packages	2018-07-25 23:10:10 -07:00
r-topgo	Add top-level attributes for git R (Bioconductor) packages	2018-07-25 23:10:10 -07:00
r-trimcluster
r-truncnorm
r-trust
r-tseries
r-tsne
r-ttr
r-udunits2
r-units
r-utf8	r-utf8 v1.1.3 - New package (#8206 )	2018-05-19 16:23:03 -05:00
r-utils
r-uuid
r-variantannotation	Add top-level attributes for git R (Bioconductor) packages	2018-07-25 23:10:10 -07:00
r-varselrf
r-vcd
r-vegan
r-vgam
r-vipor	r-vipor: Create new package (#8128 )	2018-05-14 16:38:59 -05:00
r-viridis
r-viridislite
r-visnetwork
r-vsn	Add top-level attributes for git R (Bioconductor) packages	2018-07-25 23:10:10 -07:00
r-whisker
r-withr
r-xde	Add top-level attributes for git R (Bioconductor) packages	2018-07-25 23:10:10 -07:00
r-xgboost
r-xlconnect
r-xlconnectjars
r-xlsx
r-xlsxjars
r-xmapbridge	Add top-level attributes for git R (Bioconductor) packages	2018-07-25 23:10:10 -07:00
r-xml
r-xml2
r-xtable
r-xts
r-xvector	Add top-level attributes for git R (Bioconductor) packages	2018-07-25 23:10:10 -07:00
r-yaml
r-yapsa	Add top-level attributes for git R (Bioconductor) packages	2018-07-25 23:10:10 -07:00
r-yaqcaffy	Add top-level attributes for git R (Bioconductor) packages	2018-07-25 23:10:10 -07:00
r-yarn	Add top-level attributes for git R (Bioconductor) packages	2018-07-25 23:10:10 -07:00
r-zlibbioc	Add top-level attributes for git R (Bioconductor) packages	2018-07-25 23:10:10 -07:00
r-zoo
racon	new package: racon (bioinformatics) (#7726 )	2018-04-22 07:54:48 -05:00
raft	Replace git=git with explicit branch names	2018-07-25 23:10:10 -07:00
ragel	New colm, ragel packages (#7867 )	2018-04-23 10:50:58 -05:00
raja	Add top-level attributes for git R-Z packages	2018-07-25 23:10:10 -07:00
randfold
random123
randrproto
rankstr	Add top-level attributes for git R-Z packages	2018-07-25 23:10:10 -07:00
rapidjson
ravel
raxml
ray
rdma-core	rdma-core: new package (#7835 )	2018-04-25 10:33:30 -05:00
rdp-classifier
re2c
readfq	Add top-level attributes for git R-Z packages	2018-07-25 23:10:10 -07:00
readline
recordproto
redset	Further improvements to version parsing	2018-07-25 23:10:10 -07:00
redundans
relion	Add top-level attributes for git R-Z packages	2018-07-25 23:10:10 -07:00
rempi	added ReMPI version 1.1.0 (#8548 )	2018-06-22 17:03:41 -05:00
rename
rendercheck
renderproto
repeatmasker	repeatmasker: fix bin location and dependency (#8286 )	2018-05-25 18:22:25 -05:00
resourceproto
revbayes
rgb
rhash
rlwrap
rmlab	Add top-level attributes for git R-Z packages	2018-07-25 23:10:10 -07:00
rna-seqc
rngstreams	Add new package: rngstreams (#8395 )	2018-06-06 12:10:56 -05:00
rockstar	Further improvements to version parsing	2018-07-25 23:10:10 -07:00
root
rose	Add top-level attributes for git R-Z packages	2018-07-25 23:10:10 -07:00
rr	add commented test dependencies (#8407 )	2018-06-07 10:33:59 -05:00
rsbench
rsem
rstart
rsync
rtags
rtax
ruby	Add url_for_version and list_url to Ruby package (#8216 )	2018-07-06 07:22:38 -05:00
ruby-gnuplot
ruby-narray	All git URLs end in .git	2018-07-25 23:10:10 -07:00
ruby-ronn
ruby-rubyinline
ruby-svn2git	New Package: ruby-svn2git (#7979 )	2018-05-03 10:12:57 -05:00
ruby-terminal-table
rust	Add top-level attributes for git R-Z packages	2018-07-25 23:10:10 -07:00
rust-bindgen
sabre	Add top-level attributes for git R-Z packages	2018-07-25 23:10:10 -07:00
sailfish	Further improvements to version parsing	2018-07-25 23:10:10 -07:00
salmon	salmon: adding in version restriction for boost (#8129 )	2018-05-14 18:48:28 -05:00
sambamba	Add top-level attributes for git R-Z packages	2018-07-25 23:10:10 -07:00
samblaster
samrai	samrai: update package for 3.12.0 and fix compilation bugs for earlier versions (#8501 )	2018-06-18 13:52:24 -05:00
samtools	Bump samtools, hstlib and bcftools to version 1.8. (#8020 )	2018-05-04 16:27:54 -05:00
sandbox
sas
satsuma2	Add top-level attributes for git R-Z packages	2018-07-25 23:10:10 -07:00
savanna	Add top-level attributes for git R-Z packages	2018-07-25 23:10:10 -07:00
saws	Add top-level attributes for git R-Z packages	2018-07-25 23:10:10 -07:00
sbt	Bump sbt to 1.1.6. (#8634 )	2018-07-03 10:03:49 -05:00
scala	Added the latest versions of a few packages (#7910 )	2018-04-26 14:46:45 +02:00
scalasca
scalpel
scan-for-matches
scons
scorec-core	Add top-level attributes for git R-Z packages	2018-07-25 23:10:10 -07:00
scorep	Update scorep and friends to newest versions (#8171 )	2018-05-17 19:52:01 -05:00
scotch	Scotch: update package (#8711 )	2018-07-15 15:54:28 -05:00
scr	Add top-level attributes for git R-Z packages	2018-07-25 23:10:10 -07:00
screen	screen: update package (#8630 )	2018-07-02 16:03:22 -05:00
scripts
scrnsaverproto
sctk
sdl2
sdl2-image
sed
seqan
seqprep
seqtk
serf
sessreg
setxkbmap
sga
shapeit
shared-mime-info	added shared-mime-info version 1.9 (#8063 )	2018-05-08 17:52:02 -05:00
shiny-server
shocklibs	py-mg-rast-tools: Create new package and its dependencies. (#7816 )	2018-04-21 10:28:44 -05:00
shoremap	shoremap: new package (#7343 )	2018-05-12 08:22:45 +02:00
shortbred
shortstack
showfont
shuffile	Further improvements to version parsing	2018-07-25 23:10:10 -07:00
sickle
siesta
signalp
signify
silo	silo: Make silo use AutotoolsPackage (#8551 )	2018-06-22 17:19:03 -05:00
simplemoc
simul
simulationio	Add top-level attributes for git R-Z packages	2018-07-25 23:10:10 -07:00
singularity	Add top-level attributes for git R-Z packages	2018-07-25 23:10:10 -07:00
sleef	sleef: a new library. (#8198 )	2018-05-19 11:26:31 -05:00
slepc	slepc: add blopex variant (#8820 )	2018-07-30 18:18:36 -05:00
slurm
smalt
smproxy
snakemake
snap	Add top-level attributes for git R-Z packages	2018-07-25 23:10:10 -07:00
snap-berkeley
snap-korf
snappy	Parquet: new packages (#8601 )	2018-07-04 07:24:38 -05:00
snbone	Add top-level attributes for git R-Z packages	2018-07-25 23:10:10 -07:00
sniffles
snpeff
snphylo
snptest
soap2
soapdenovo2
soapdenovo-trans
soapindel
soapsnp
sofa-c
somatic-sniper
sortmerna	Add top-level attributes for git R-Z packages	2018-07-25 23:10:10 -07:00
sosflow	Add top-level attributes for git R-Z packages	2018-07-25 23:10:10 -07:00
sowing	sowing: update to version used by current petsc -i.e 1.1.25-p1 (#8561 )	2018-06-24 17:02:39 -05:00
sox
spades
spark	Added the latest versions of a few packages (#7910 )	2018-04-26 14:46:45 +02:00
sparsehash
sparta
spdlog
spectrum-mpi	Further improvements to version parsing	2018-07-25 23:10:10 -07:00
speex
spglib
sph2pipe
spherepack
spindle
spot
sqlite	add sqlitebrowser (#8418 )	2018-06-07 11:34:29 -05:00
sqlitebrowser	add sqlitebrowser (#8418 )	2018-06-07 11:34:29 -05:00
squid
sra-toolkit
sspace-longread
sspace-standard
sst-dumpi	Add top-level attributes for git R-Z packages	2018-07-25 23:10:10 -07:00
sst-macro	Add top-level attributes for git R-Z packages	2018-07-25 23:10:10 -07:00
stacks
staden-io-lib
star	Remove unnecessary version-specific URL overrides (#8693 )	2018-07-12 07:28:11 +02:00
star-ccm-plus
startup-notification
stat	added stat version 4.0.0 (#8062 )	2018-05-08 17:52:38 -05:00
stc
stow
strace
stream	Add top-level attributes for git R-Z packages	2018-07-25 23:10:10 -07:00
strelka
stress
stringtie
structure
sublime-text	Adjusted sublime-text package (#8685 )	2018-07-11 12:41:48 -05:00
subread	subread: use compiler wrappers when compiling (#8328 )	2018-06-01 10:30:47 +02:00
subversion
suite-sparse	suite-sparse: add version 5.3.0 (#8837 )	2018-08-02 07:25:57 +02:00
sumaclust
sundials	Add new Sundials versions (#8075 )	2018-05-09 20:53:25 -05:00
superlu
superlu-dist	Add top-level attributes for git R-Z packages	2018-07-25 23:10:10 -07:00
superlu-mt
supernova
sw4lite	All git URLs end in .git	2018-07-25 23:10:10 -07:00
swap-assembler	swap-assembler: Create new package. (#8144 )	2018-05-17 15:43:30 -05:00
swarm
swfft	All git URLs end in .git	2018-07-25 23:10:10 -07:00
swiftsim	adds new version to swiftsim (#8093 )	2018-05-11 10:32:30 -05:00
swig
symengine	Replace git=git with explicit branch names	2018-07-25 23:10:10 -07:00
sympol
sz	sz: fix checksum for 2.0.2.0 (#8868 )	2018-08-02 11:43:59 -05:00
tabix	Add top-level attributes for git R-Z packages	2018-07-25 23:10:10 -07:00
talloc
tantan
tar	Added the latest versions of a few packages (#7910 )	2018-04-26 14:46:45 +02:00
targetp
task	task: Add version 2.5.1 (#8184 )	2018-05-18 10:28:19 -05:00
taskd
tasmanian	added Tasmanian versions 5.1 and development, enabled the Tasmanian options through +~ flags (#8804 )	2018-07-27 10:10:32 -05:00
tassel	Add top-level attributes for git R-Z packages	2018-07-25 23:10:10 -07:00
tau	Add new versions for TAU and PDT package (#8497 )	2018-06-17 17:21:00 -05:00
tcl	tcl package: Install sources (#8153 )	2018-06-08 11:10:40 -07:00
tcl-itcl	Add package tcl-itcl (#8578 )	2018-06-27 10:05:00 -05:00
tcl-tcllib
tcl-tclxml
tclap
tcoffee	Add top-level attributes for git R-Z packages	2018-07-25 23:10:10 -07:00
tcptrace	style: bring packages in compliance with pep8-naming	2018-07-19 00:41:36 -07:00
tcsh	style: bring packages in compliance with pep8-naming	2018-07-19 00:41:36 -07:00
tealeaf
templight	Templight package (#8782 )	2018-07-26 11:19:14 -05:00
templight-tools	Templight package (#8782 )	2018-07-26 11:19:14 -05:00
tetgen
tethex	Replace git=git with explicit branch names	2018-07-25 23:10:10 -07:00
texinfo
texlive	Create custom PATH that texlive requires in its module. (#8064 )	2018-05-12 18:40:36 -05:00
the-platinum-searcher	Add docs on new top-level VCS attributes	2018-07-25 23:10:10 -07:00
the-silver-searcher
thrift	Parquet: new packages (#8601 )	2018-07-04 07:24:38 -05:00
thrust
tig
tinyxml	Build shared libs for tinyxml. (#7914 )	2018-04-30 10:03:24 -05:00
tinyxml2
tioga	Add top-level attributes for git R-Z packages	2018-07-25 23:10:10 -07:00
tk
tmalign
tmhmm
tmux	Added the latest versions of a few packages (#7910 )	2018-04-26 14:46:45 +02:00
tmuxinator	Add top-level attributes for git R-Z packages	2018-07-25 23:10:10 -07:00
tophat	Add Tophat v2.1.2, fixes automake issues (#8266 )	2018-05-24 20:04:03 -05:00
tppred
transabyss
transdecoder	transdecoder: needs perl-uri-escape (#8690 )	2018-07-11 17:38:58 -05:00
transposome
transset
trapproto
tree
trf	trf: make executable (#8265 )	2018-05-24 10:47:17 -05:00
triangle
trilinos	Trilinos: Update rules for superlu-dist version compatibility. (#8851 )	2018-08-02 11:25:30 -05:00
trimgalore	trimgalore: Use perl from env (#8318 )	2018-05-30 12:31:05 -05:00
trimmomatic
trinity	Trinity plugins (#8516 )	2018-07-22 17:17:44 -05:00
trnascan-se
turbine
turbomole
tut
twm
tycho2	Add top-level attributes for git R-Z packages	2018-07-25 23:10:10 -07:00
typhon	Unit test fixes	2018-07-25 23:10:10 -07:00
typhonio	Add top-level attributes for git R-Z packages	2018-07-25 23:10:10 -07:00
uberftp
ucx	ucx: needs numactl and rdma-core (#7836 )	2018-04-25 10:34:55 -05:00
udunits2
ufo-core
ufo-filters
umpire	Add top-level attributes for git R-Z packages	2018-07-25 23:10:10 -07:00
unblur
uncrustify	Added support for uncrustify 0.67. (#8655 )	2018-07-06 19:59:34 -05:00
unibilium
unison
units
unixodbc
unuran	Add new package: unuran (#8397 )	2018-06-11 08:41:32 -05:00
unzip
usearch
util-linux
util-macros
uuid
valgrind	Replace git=git with explicit branch names	2018-07-25 23:10:10 -07:00
vampirtrace
vardictjava
varscan
vc
vcftools
vcsh
vdt
vecgeom	Use GitLab's API endpoint for fetching a git snapshot. (#7881 )	2018-04-26 16:40:11 -05:00
veclibfort	Replace git=git with explicit branch names	2018-07-25 23:10:10 -07:00
vegas2
veloc	Add top-level attributes for git R-Z packages	2018-07-25 23:10:10 -07:00
velvet
verilator	style: bring packages in compliance with pep8-naming	2018-07-19 00:41:36 -07:00
verrou	Add top-level attributes for git R-Z packages	2018-07-25 23:10:10 -07:00
videoproto
viennarna
viewres
vim	Added vim 8.1 (#8185 )	2018-05-18 12:07:05 -05:00
virtualgl
visit
vizglow
vmatch
voropp
votca-csg	Add top-level attributes for git R-Z packages	2018-07-25 23:10:10 -07:00
votca-ctp	Add top-level attributes for git R-Z packages	2018-07-25 23:10:10 -07:00
votca-tools	Add top-level attributes for git R-Z packages	2018-07-25 23:10:10 -07:00
votca-xtp	Further improvements to version parsing	2018-07-25 23:10:10 -07:00
vpfft	Add top-level attributes for git R-Z packages	2018-07-25 23:10:10 -07:00
vpic	Add top-level attributes for git R-Z packages	2018-07-25 23:10:10 -07:00
vsearch
vt	vt: Create new package (#7947 )	2018-04-30 12:11:06 -05:00
vtk	style: bring packages in compliance with pep8-naming	2018-07-19 00:41:36 -07:00
vtkh	Add top-level attributes for git R-Z packages	2018-07-25 23:10:10 -07:00
vtkm	Add top-level attributes for git R-Z packages	2018-07-25 23:10:10 -07:00
wannier90
wcslib	Add missing dependencies and variants to wcslib (#8603 )	2018-07-05 21:36:29 -05:00
wget	add commented test dependencies (#8407 )	2018-06-07 10:33:59 -05:00
wgsim	Add top-level attributes for git R-Z packages	2018-07-25 23:10:10 -07:00
windowswmproto
wireshark	Replace pkg-config dependencies with virtual (#8783 )	2018-08-02 13:29:04 -04:00
workrave	new packages: workrave and its dependencies (#7753 )	2018-06-21 18:25:26 -07:00
wt	Add top-level attributes for git R-Z packages	2018-07-25 23:10:10 -07:00
wx	Add top-level attributes for git R-Z packages	2018-07-25 23:10:10 -07:00
wxpropgrid
x11perf
xapian-core
xauth
xbacklight
xbiff
xbitmaps
xbraid
xcalc
xcb-demo
xcb-proto
xcb-util
xcb-util-cursor
xcb-util-errors
xcb-util-image
xcb-util-keysyms
xcb-util-renderutil
xcb-util-wm
xcb-util-xrm	Add top-level attributes for git R-Z packages	2018-07-25 23:10:10 -07:00
xclip	Add top-level attributes for git R-Z packages	2018-07-25 23:10:10 -07:00
xclipboard
xclock
xcmiscproto
xcmsdb
xcompmgr
xconsole
xcursor-themes
xcursorgen
xdbedizzy
xditview
xdm
xdpyinfo
xdriinfo
xedit
xerces-c	Add Xerces-C++ 3.2.1 (#8208 )	2018-05-20 15:04:06 -05:00
xev
xextproto
xeyes
xf86bigfontproto
xf86dga
xf86dgaproto
xf86driproto
xf86miscproto
xf86rushproto
xf86vidmodeproto
xfd
xfindproxy
xfontsel
xfs
xfsinfo
xfwp
xgamma
xgc
xhmm	Add top-level attributes for git R-Z packages	2018-07-25 23:10:10 -07:00
xhost
xineramaproto
xinit
xinput
xios	Add top-level attributes for hg, svn, and git A-L packages	2018-07-25 23:10:10 -07:00
xkbcomp
xkbdata
xkbevd
xkbprint
xkbutils
xkeyboard-config
xkill
xload
xlogo
xlsatoms
xlsclients
xlsfonts
xmag
xman
xmessage
xmh
xmlf90
xmlto
xmodmap
xmore
xorg-cf-files
xorg-docs
xorg-gtest
xorg-server
xorg-sgml-doctools
xphelloworld
xplor-nih
xplsprinters
xpr
xprehashprinterlist
xprop
xproto
xproxymanagementprotocol
xqilla
xrandr	xrandr: needs randrproto (#7814 )	2018-04-18 14:02:04 -05:00
xrdb
xrefresh
xrootd	Update with recent versions through 4.8.3 and add variants. (#7933 )	2018-04-27 10:11:33 -05:00
xrx
xsbench
xscope
xsdk	Balay/petsc remove boost dependency (#8508 )	2018-06-24 10:52:14 -05:00
xsdktrilinos	Add top-level attributes for git R-Z packages	2018-07-25 23:10:10 -07:00
xset
xsetmode
xsetpointer
xsetroot
xsimd	Add top-level attributes for git R-Z packages	2018-07-25 23:10:10 -07:00
xsm
xstdcmap
xtensor	Add top-level attributes for git R-Z packages	2018-07-25 23:10:10 -07:00
xtensor-python	Add top-level attributes for git R-Z packages	2018-07-25 23:10:10 -07:00
xterm
xtl	Add top-level attributes for git R-Z packages	2018-07-25 23:10:10 -07:00
xtrans
xtrap
xts
xvidtune
xvinfo
xwd
xwininfo
xwud
xxhash	New package xxhash. (#8530 )	2018-06-20 13:51:53 -05:00
xz	Add xz 5.2.4 (#8202 )	2018-05-20 15:01:33 -05:00
yajl	Add top-level attributes for git R-Z packages	2018-07-25 23:10:10 -07:00
yambo	Further improvements to version parsing	2018-07-25 23:10:10 -07:00
yaml-cpp	Add top-level attributes for git R-Z packages	2018-07-25 23:10:10 -07:00
yasm	Replace git=git with explicit branch names	2018-07-25 23:10:10 -07:00
yorick	Add top-level attributes for git R-Z packages	2018-07-25 23:10:10 -07:00
z3
zeromq	Add top-level attributes for git R-Z packages	2018-07-25 23:10:10 -07:00
zfp
zip
zlib
zoltan	zoltan: depends on metis.h and libmetis (#8583 )	2018-06-26 23:29:22 -07:00
zsh	packages: do not use generic checksum= in version() directives	2018-07-23 11:57:52 -07:00
zstd	Parquet: new packages (#8601 )	2018-07-04 07:24:38 -05:00