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Adam J. Stewart 133dd7a4ac Fix version parsing for cistem package (#9260) 
Adds 'code' to the list of suffixes that are excluded from version
parsing of URLs, such that if a URL contains the string
'cistem-1.0.0-beta-source-code', a version X will substitute in to
produce a URL with cistem-X-source-code ('source' was already excluded).
The 'cistem' package version is updated to make use of this (and fix
a fetching bug with the cistem package). A unit test is added to check
this parsing case.
2018-09-18 19:29:18 -07:00
..
abinit
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abyss
…
accfft
…
ack
…
activeharmony
…
adept-utils
…
adios
…
adios2
adios2: add 2.2.0 (#8871)
2018-08-02 11:16:17 -05:00
adlbx
…
adol-c
…
aegean
…
aida
New package: AIDA (#9094)
2018-09-03 21:02:06 -05:00
albany
…
albert
…
alglib
install_tree, copy_tree can install into existing directory structures (#8289)
2018-08-15 09:30:09 -07:00
allinea-forge
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allinea-reports
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allpaths-lg
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alquimia
…
alsa-lib
…
amg
AMG: update version (#9228)
2018-09-12 14:11:05 -06:00
amg2013
Update broken codesign.llnl.gov urls (#8880)
2018-08-03 10:25:10 -05:00
amp
…
ampliconnoise
…
amrex
xsdk: add slepc and amrex [and handle clang conflict wrt amrex] (#8932)
2018-08-13 22:17:17 -07:00
amrvis
Updating amrvis to allow building with profiling support. (#9204)
2018-09-14 17:16:35 -07:00
andi
…
angsd
…
ant
…
antlr
…
ants
…
ape
…
aperture-photometry
aperture-photometry: new package (#9119)
2018-09-03 20:52:11 -05:00
apex
…
apple-libunwind
apple-libunwind: update path to library (#9265)
2018-09-18 18:48:53 -07:00
applewmproto
…
appres
…
apr
…
apr-util
…
aragorn
…
archer
…
argobots
argobots: new package starting at 1.0b1 (#9238)
2018-09-14 15:48:40 -07:00
argp-standalone
…
argtable
…
arlecore
install_tree, copy_tree can install into existing directory structures (#8289)
2018-08-15 09:30:09 -07:00
armadillo
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arpack-ng
arpack: add version 3.6.2 (#8881)
2018-08-03 09:53:44 -05:00
arrow
…
ascent
…
asciidoc
…
aspa
…
aspcud
…
aspect
aspect: new version (#9146)
2018-09-03 20:35:45 -05:00
aspell
…
aspell6-de
Download GNU packages from mirrors (#8992)
2018-08-15 23:27:21 -07:00
aspell6-en
Download GNU packages from mirrors (#8992)
2018-08-15 23:27:21 -07:00
aspell6-es
Download GNU packages from mirrors (#8992)
2018-08-15 23:27:21 -07:00
aspera-cli
…
assimp
assimp: fix compile issues with intel compilers on knl/linux [a depen… (#9191)
2018-09-08 16:18:37 -05:00
astra
…
astral
…
astyle
…
at-spi2-atk
Packages/atk (#9002)
2018-08-16 18:11:52 -05:00
at-spi2-core
Packages/atk (#9002)
2018-08-16 18:11:52 -05:00
atk
atk package: hotfix #9099 (#9102)
2018-08-28 16:35:30 -04:00
atlas
…
atom-dft
install_tree, copy_tree can install into existing directory structures (#8289)
2018-08-15 09:30:09 -07:00
atompaw
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atop
…
augustus
…
autoconf
Download GNU packages from mirrors (#8992)
2018-08-15 23:27:21 -07:00
autodock-vina
install_tree, copy_tree can install into existing directory structures (#8289)
2018-08-15 09:30:09 -07:00
autogen
Download GNU packages from mirrors (#8992)
2018-08-15 23:27:21 -07:00
automaded
…
automake
Download GNU packages from mirrors (#8992)
2018-08-15 23:27:21 -07:00
axel
…
axl
ECP VELOC Package update (#8910)
2018-08-08 21:40:38 -04:00
bamdst
Bamdst: a new package. (#9113)
2018-09-04 14:35:33 -05:00
bamtools
…
bamutil
…
barrnap
…
bash
Download GNU packages from mirrors (#8992)
2018-08-15 23:27:21 -07:00
bash-completion
Replace git=git with explicit branch names
2018-07-25 23:10:10 -07:00
bats
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bazel
…
bbcp
…
bbmap
…
bc
Download GNU packages from mirrors (#8992)
2018-08-15 23:27:21 -07:00
bcftools
…
bcl2fastq2
install_tree, copy_tree can install into existing directory structures (#8289)
2018-08-15 09:30:09 -07:00
bdftopcf
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bdw-gc
…
bear
…
beast1
…
beast2
…
bedops
…
bedtools2
…
beforelight
…
benchmark
…
berkeley-db
…
bertini
…
bib2xhtml
…
bigreqsproto
…
binutils
binutils: add variant 'nls' for native language support (#9124)
2018-08-29 20:32:41 -07:00
bioawk
install_tree, copy_tree can install into existing directory structures (#8289)
2018-08-15 09:30:09 -07:00
biopieces
install_tree, copy_tree can install into existing directory structures (#8289)
2018-08-15 09:30:09 -07:00
bismark
…
bison
bison: add new version (#9085)
2018-08-23 17:00:26 -05:00
bitmap
…
blasr
…
blasr-libcpp
…
blast-plus
…
blat
…
blaze
…
blis
Add blis package (#8925)
2018-08-16 11:26:43 -05:00
bliss
…
blitz
…
bmake
…
bml
…
bohrium
Update bohrium version (#9020)
2018-08-18 09:22:16 -05:00
bolt
bolt: new package starting at 1.0b1 (#9253)
2018-09-14 15:49:36 -07:00
bookleaf-cpp
…
boost
boost: add 1.68.0 (#8931)
2018-08-09 17:08:20 -05:00
boostmplcartesianproduct
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bowtie
…
bowtie2
…
boxlib
…
bpp-core
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bpp-phyl
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bpp-seq
…
bpp-suite
…
bracken
…
braker
braker: add new version 2.1.0 (#8946)
2018-08-26 19:44:53 -05:00
branson
All git URLs end in .git
2018-07-25 23:10:10 -07:00
breakdancer
breakdancer: fix several issues (#9251)
2018-09-14 20:11:34 -07:00
breseq
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brigand
…
bsseeker2
…
bucky
…
bumpversion
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busco
…
butter
…
bwa
…
bwtool
…
byobu
…
bzip2
Change bzip2 download URL (#8976)
2018-08-14 10:46:15 -06:00
c-blosc
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c-lime
…
caffe
…
cairo
…
cairomm
…
caliper
caliper: update to use unwind virtual package
2018-08-06 22:01:50 -07:00
callpath
…
camellia
…
candle-benchmarks
Packages/candle benchmarks (#9266)
2018-09-18 13:02:03 -06:00
cantera
…
canu
…
cap3
…
cares
…
cask
…
casper
install_tree, copy_tree can install into existing directory structures (#8289)
2018-08-15 09:30:09 -07:00
catalyst
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catch
…
cbench
…
cblas
CBLAS: Don't hardcode BLAS library name (#9017)
2018-08-18 11:19:24 -05:00
cbtf
Update openspeedshop and cbtf version numbers (#9150)
2018-09-03 20:35:25 -05:00
cbtf-argonavis
Update openspeedshop and cbtf version numbers (#9150)
2018-09-03 20:35:25 -05:00
cbtf-argonavis-gui
qtgraph and cbtf-argonavis create proper library paths in modules (#8797)
2018-08-17 15:58:08 -07:00
cbtf-krell
Update openspeedshop and cbtf version numbers (#9150)
2018-09-03 20:35:25 -05:00
cbtf-lanl
Update openspeedshop and cbtf version numbers (#9150)
2018-09-03 20:35:25 -05:00
ccache
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cctools
…
cdbfasta
…
cdd
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cddlib
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cdhit
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cdo
add cdo releases 1.9.4 and 1.9.5 (#9079)
2018-08-23 10:27:35 -05:00
ceed
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cereal
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ceres-solver
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cfitsio
…
cgal
…
cgm
…
cgns
…
channelflow
New package: channelflow (#9111)
2018-08-29 10:54:34 +02:00
charliecloud
add Charliecloud 0.9.1 (#8902)
2018-08-06 17:43:00 -05:00
charmpp
Charmpp: rename charm to charmpp according to ++ conventions (#9216)
2018-09-14 17:01:07 -07:00
chatterbug
chatterbug: new spack package (#8994)
2018-08-18 16:18:50 -07:00
check
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chlorop
install_tree, copy_tree can install into existing directory structures (#8289)
2018-08-15 09:30:09 -07:00
chombo
install_tree, copy_tree can install into existing directory structures (#8289)
2018-08-15 09:30:09 -07:00
cistem
Fix version parsing for cistem package (#9260)
2018-09-18 19:29:18 -07:00
cityhash
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clamr
…
clapack
Fix missing makefile variable in clapack package (#9016)
2018-08-18 11:19:40 -05:00
cleaveland4
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cleverleaf
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clfft
…
clhep
Add new CLHEP releases and move to sha256 hashes (#9089)
2018-08-24 09:49:38 -05:00
clingo
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cloc
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cloog
…
cloverleaf
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cloverleaf3d
…
clustalo
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clustalw
…
cmake
cmake: add version 3.12.2 (#9248)
2018-09-14 09:36:39 -07:00
cmocka
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cmor
…
cnmem
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cnpy
…
cntk
…
cntk1bitsgd
…
codar-cheetah
install_tree, copy_tree can install into existing directory structures (#8289)
2018-08-15 09:30:09 -07:00
codes
New package: CODES simulation framework (#9133)
2018-09-03 20:43:50 -05:00
coevp
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cohmm
…
coinhsl
coinhsl: add @2015.06.23, explain versions, SHA256 (#9258)
2018-09-16 15:03:26 -05:00
colm
…
colordiff
…
comd
ecp-proxy-apps: update dependencies for release 1.0 and 1.1 (#9217)
2018-09-11 15:10:49 -06:00
commons-lang
Add MDB driver support to GDAL (#8614)
2018-08-29 12:35:56 -05:00
commons-lang3
Add MDB driver support to GDAL (#8614)
2018-08-29 12:35:56 -05:00
commons-logging
Add MDB driver support to GDAL (#8614)
2018-08-29 12:35:56 -05:00
compiz
…
compositeproto
…
conduit
…
constype
…
converge
…
coreutils
Download GNU packages from mirrors (#8992)
2018-08-15 23:27:21 -07:00
corset
…
cosmomc
…
cosp2
install_tree, copy_tree can install into existing directory structures (#8289)
2018-08-15 09:30:09 -07:00
cp2k
install_tree, copy_tree can install into existing directory structures (#8289)
2018-08-15 09:30:09 -07:00
cppad
Replace git=git with explicit branch names
2018-07-25 23:10:10 -07:00
cppcheck
install_tree, copy_tree can install into existing directory structures (#8289)
2018-08-15 09:30:09 -07:00
cppgsl
new package: GSL - C++ Guideline Support Library (#9091)
2018-08-24 17:45:18 -04:00
cpprestsdk
…
cppunit
…
cppzmq
…
cpu-features
…
cpuinfo
…
cram
…
cryptopp
…
cscope
…
csdp
…
ctffind
…
cub
…
cube
…
cubelib
scorep: make optional packages variants (#9011)
2018-08-18 11:25:05 -05:00
cubew
scorep: make optional packages variants (#9011)
2018-08-18 11:25:05 -05:00
cuda
…
cuda-memtest
…
cudnn
install_tree, copy_tree can install into existing directory structures (#8289)
2018-08-15 09:30:09 -07:00
cufflinks
…
cups
…
curl
…
cvs
Download GNU packages from mirrors (#8992)
2018-08-15 23:27:21 -07:00
czmq
flux: update flux-core package and add a flux-sched package (#8818)
2018-08-02 16:20:55 -04:00
dakota
…
daligner
…
damageproto
…
damselfly
…
darshan-runtime
…
darshan-util
…
dash
…
datamash
Download GNU packages from mirrors (#8992)
2018-08-15 23:27:21 -07:00
dataspaces
…
davix
…
dbus
Add version 1.12.8 to dbus (#8949)
2018-08-11 09:21:20 -05:00
dealii
xsdk: add dealii (#7529)
2018-09-06 19:22:17 -05:00
dealii-parameter-gui
…
deconseq-standalone
…
dejagnu
Download GNU packages from mirrors (#8992)
2018-08-15 23:27:21 -07:00
delly2
…
denovogear
…
dia
Dia needs access to gettext and pkg-config. (#8840)
2018-08-01 19:12:17 -05:00
dialign-tx
…
diamond
…
diffsplice
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direnv
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discovar
…
discovardenovo
…
dislin
…
dlpack
…
dmd
Pack dlang's stdlib into dmd. (#9131)
2018-09-04 14:49:28 -05:00
dmlc-core
…
dmtcp
Add package DMTCP (#8808)
2018-07-26 09:47:55 -05:00
dmxproto
…
docbook-xml
…
docbook-xsl
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dos2unix
…
dotnet-core-sdk
changed to new install_tree formalism (#9181)
2018-09-15 09:40:50 -05:00
double-conversion
…
doxygen
…
dri2proto
…
dri3proto
…
dsdp
…
dsrc
…
dtcmp
…
dyninst
dyninst: add dependency on libiberty (#8806)
2018-08-27 14:34:05 -07:00
ea-utils
…
easybuild
…
ebms
…
eccodes
…
eclipse-gcj-parser
…
ecp-proxy-apps
Packages/candle benchmarks (#9266)
2018-09-18 13:02:03 -06:00
ed
Download GNU packages from mirrors (#8992)
2018-08-15 23:27:21 -07:00
editres
…
eigen
add eigen@3.3.5 (#9212)
2018-09-14 17:14:46 -07:00
elasticsearch
Added Kibana package, added Elasticsearch to 6.4.0 (#9239)
2018-09-14 10:50:20 -07:00
elemental
…
elfutils
elfutils: update version and add variants (#8891)
2018-08-07 14:04:05 -05:00
elk
…
elpa
…
emacs
Download GNU packages from mirrors (#8992)
2018-08-15 23:27:21 -07:00
emboss
Skip update check. (#8683)
2018-07-27 09:57:05 -05:00
encodings
…
environment-modules
…
eospac
…
er
ECP VELOC Package update (#8910)
2018-08-08 21:40:38 -04:00
es
…
esmf
…
essl
Unit test fixes
2018-07-25 23:10:10 -07:00
ethminer
…
etsf-io
…
everytrace
…
everytrace-example
…
evieext
…
exabayes
…
examinimd
…
exampm
…
exasp2
…
exmcutils
…
exodusii
…
exonerate
…
expat
…
expect
…
express
…
extrae
…
exuberant-ctags
…
f90cache
…
fabtests
…
falcon
…
farmhash
install_tree, copy_tree can install into existing directory structures (#8289)
2018-08-15 09:30:09 -07:00
fast-gbs
…
fast-global-file-status
add fgfs variant to stat and develop version (#8919)
2018-08-09 10:56:08 -05:00
fasta
Add package for fasta (#8953)
2018-08-11 11:38:31 -05:00
fastjar
…
fastmath
…
fastme
…
fastphase
…
fastq-screen
…
fastqc
install_tree, copy_tree can install into existing directory structures (#8289)
2018-08-15 09:30:09 -07:00
fastqvalidator
…
fasttree
…
fastx-toolkit
…
fenics
…
fermi
…
fermikit
…
fermisciencetools
install_tree, copy_tree can install into existing directory structures (#8289)
2018-08-15 09:30:09 -07:00
ferret
…
ffmpeg
…
fftw
…
fimpute
…
findutils
Download GNU packages from mirrors (#8992)
2018-08-15 23:27:21 -07:00
fio
…
fish
…
fixesproto
…
flac
…
flang
Package/flang: Updated to use own version of llvm (#8766)
2018-08-03 20:35:09 -04:00
flann
patch flann // gcc // cmake@3.11+ (#9214)
2018-09-14 17:01:58 -07:00
flash
…
flatbuffers
…
flecsale
…
flecsi
flecsi: fix build (#9129)
2018-08-29 09:23:02 -06:00
flex
…
flint
Replace git=git with explicit branch names
2018-07-25 23:10:10 -07:00
flit
…
fltk
…
flux-core
flux: update flux-core package and add a flux-sched package (#8818)
2018-08-02 16:20:55 -04:00
flux-sched
flux: update flux-core package and add a flux-sched package (#8818)
2018-08-02 16:20:55 -04:00
fluxbox
Replace pkg-config dependencies with virtual (#8783)
2018-08-02 13:29:04 -04:00
fmt
…
foam-extend
install_tree: symlink handling and add 'ignore' option (#9019)
2018-08-17 22:08:38 -04:00
folly
…
font-adobe-75dpi
…
font-adobe-100dpi
…
font-adobe-utopia-75dpi
…
font-adobe-utopia-100dpi
…
font-adobe-utopia-type1
…
font-alias
…
font-arabic-misc
…
font-bh-75dpi
…
font-bh-100dpi
…
font-bh-lucidatypewriter-75dpi
…
font-bh-lucidatypewriter-100dpi
…
font-bh-ttf
…
font-bh-type1
…
font-bitstream-75dpi
…
font-bitstream-100dpi
…
font-bitstream-speedo
…
font-bitstream-type1
…
font-cronyx-cyrillic
…
font-cursor-misc
…
font-daewoo-misc
…
font-dec-misc
…
font-ibm-type1
…
font-isas-misc
…
font-jis-misc
…
font-micro-misc
…
font-misc-cyrillic
…
font-misc-ethiopic
…
font-misc-meltho
…
font-misc-misc
…
font-mutt-misc
…
font-schumacher-misc
…
font-screen-cyrillic
…
font-sony-misc
…
font-sun-misc
…
font-util
…
font-winitzki-cyrillic
…
font-xfree86-type1
…
fontcacheproto
…
fontconfig
…
fontsproto
…
fonttosfnt
…
fp16
…
fpc
…
fr-hit
…
freebayes
…
freeglut
…
freetype
…
fseq
…
fsl
install_tree, copy_tree can install into existing directory structures (#8289)
2018-08-15 09:30:09 -07:00
fslsfonts
…
fstobdf
…
ftgl
FTGL package workarounds (#8812)
2018-07-26 15:54:46 -05:00
funhpc
…
fyba
…
gapbs
…
gapcloser
…
gapfiller
…
gasnet
gasnet:version bump (#9127)
2018-08-29 06:48:52 +02:00
gatk
gatk: new version (#9202)
2018-09-14 13:55:52 -07:00
gaussian
install_tree, copy_tree can install into existing directory structures (#8289)
2018-08-15 09:30:09 -07:00
gawk
Download GNU packages from mirrors (#8992)
2018-08-15 23:27:21 -07:00
gblocks
…
gcc
Download GNU packages from mirrors (#8992)
2018-08-15 23:27:21 -07:00
gccmakedep
…
gccxml
…
gconf
…
gcta
…
gdal
GDAL: add version 2.3.1 (#9156)
2018-09-01 07:32:24 -05:00
gdb
gdb: add lzma support by default (#9247)
2018-09-15 09:06:16 -05:00
gdbm
Download GNU packages from mirrors (#8992)
2018-08-15 23:27:21 -07:00
gdk-pixbuf
…
gdl
…
geant4
…
gearshifft
Further improvements to version parsing
2018-07-25 23:10:10 -07:00
gemmlowp
…
genemark-et
…
genomefinisher
install_tree, copy_tree can install into existing directory structures (#8289)
2018-08-15 09:30:09 -07:00
genometools
…
geopm
…
geos
…
gettext
Download GNU packages from mirrors (#8992)
2018-08-15 23:27:21 -07:00
gflags
…
ghost
…
ghostscript
…
ghostscript-fonts
…
giflib
…
git
install_tree, copy_tree can install into existing directory structures (#8289)
2018-08-15 09:30:09 -07:00
git-imerge
…
git-lfs
…
gl2ps
…
glew
…
glfmultiples
…
glib
glib: Add 2.56.2 (#9071)
2018-08-22 14:21:54 -05:00
glibmm
…
glimmer
…
glm
…
global
…
globalarrays
…
globus-toolkit
…
glog
…
gloo
…
glpk
Download GNU packages from mirrors (#8992)
2018-08-15 23:27:21 -07:00
glproto
…
glvis
Add libs attribute to mesa and mesa-glu packages (#8904)
2018-08-07 10:18:05 +02:00
gmake
Download GNU packages from mirrors (#8992)
2018-08-15 23:27:21 -07:00
gmap-gsnap
…
gmime
…
gmodel
gmodel: new package starting at 2.1.0 (#9170)
2018-09-06 10:48:08 +02:00
gmp
Download GNU packages from mirrors (#8992)
2018-08-15 23:27:21 -07:00
gmsh
gmsh: add git master and 4.0.0 versions (#9172)
2018-09-06 10:42:40 +02:00
gnat
…
gnu-prolog
…
gnupg
…
gnuplot
…
gnutls
…
go
go: Update to 1.11 (#9101)
2018-08-29 07:00:40 +02:00
go-bootstrap
install_tree, copy_tree can install into existing directory structures (#8289)
2018-08-15 09:30:09 -07:00
gobject-introspection
…
googletest
…
gotcha
…
gource
…
gperf
Download GNU packages from mirrors (#8992)
2018-08-15 23:27:21 -07:00
gperftools
gperftools@2.7: new version; homepage, URL, hash updates (#9010)
2018-08-16 19:38:02 -05:00
gplates
…
grackle
install_tree, copy_tree can install into existing directory structures (#8289)
2018-08-15 09:30:09 -07:00
gradle
install_tree, copy_tree can install into existing directory structures (#8289)
2018-08-15 09:30:09 -07:00
grandr
…
graph500
…
graphicsmagick
…
graphlib
…
graphmap
…
graphviz
Replace pkg-config dependencies with virtual (#8783)
2018-08-02 13:29:04 -04:00
grass
grass improvement: specify proj data directory (#8984)
2018-08-15 09:54:08 -05:00
grib-api
…
grnboost
New package: GRNBoost (#8763)
2018-08-02 13:46:36 -04:00
groff
Download GNU packages from mirrors (#8992)
2018-08-15 23:27:21 -07:00
gromacs
Add version 5.1.5 for gromacs. (#8948)
2018-08-11 09:21:32 -05:00
gsl
Download GNU packages from mirrors (#8992)
2018-08-15 23:27:21 -07:00
gslib
…
gtkmm
…
gtkorvo-atl
…
gtkorvo-cercs-env
…
gtkorvo-dill
…
gtkorvo-enet
…
gtkplus
…
gts
…
guidance
…
guile
Download GNU packages from mirrors (#8992)
2018-08-15 23:27:21 -07:00
gurobi
install_tree, copy_tree can install into existing directory structures (#8289)
2018-08-15 09:30:09 -07:00
h5hut
…
h5part
…
h5utils
…
h5z-zfp
…
hacckernels
…
hadoop
hadoop package: fix url and checksum (#9263)
2018-09-18 18:49:52 -07:00
halc
halc: Create new package. (#8795)
2018-07-26 15:55:43 -05:00
hapcut2
…
hapdip
…
haploview
…
harfbuzz
…
harminv
…
hdf
…
hdf5
hdf5@1.10.3: new version (#9121)
2018-08-29 10:58:24 +02:00
hdf5-blosc
install_tree, copy_tree can install into existing directory structures (#8289)
2018-08-15 09:30:09 -07:00
help2man
Download GNU packages from mirrors (#8992)
2018-08-15 23:27:21 -07:00
hepmc
…
heppdt
…
hic-pro
…
highfive
…
highwayhash
…
hiop
…
hisat2
…
hisea
…
hmmer
hmmer: added version 3.2.1 & updated URL (#8787)
2018-07-26 10:07:55 -05:00
hoomd-blue
All git URLs end in .git
2018-07-25 23:10:10 -07:00
hpccg
…
hpctoolkit
All git URLs end in .git
2018-07-25 23:10:10 -07:00
hpctoolkit-externals
All git URLs end in .git
2018-07-25 23:10:10 -07:00
hpgmg
…
hpl
…
hpx
…
hpx5
…
hsakmt
…
hstr
…
htop
htop: add version 2.2.0 (#9086)
2018-08-23 18:50:01 -05:00
htslib
Add samtools 1.9 (#8961)
2018-08-12 18:54:50 -05:00
httpie
…
hub
Replace git=git with explicit branch names
2018-07-25 23:10:10 -07:00
hunspell
…
hwloc
Hwloc add update 2.0.2 (#9244)
2018-09-14 10:48:38 -07:00
hybpiper
…
hydra
…
hydrogen
…
hypre
hypre: patch +shared@2.13.0: on darwin (#9220)
2018-09-14 17:14:30 -07:00
i3
Replace pkg-config dependencies with virtual (#8783)
2018-08-02 13:29:04 -04:00
ibmisc
…
iceauth
…
icedtea
Java updates: new versions, classpath, and JAVA_HOME (#8613)
2018-08-28 14:35:13 -04:00
icet
…
ico
…
icu4c
…
id3lib
…
idba
…
igraph
…
igv
…
igvtools
install_tree, copy_tree can install into existing directory structures (#8289)
2018-08-15 09:30:09 -07:00
ilmbase
…
image-magick
…
imake
…
imp
…
impute2
…
infernal
…
inputproto
…
intel
Intel prefixes (#7469)
2018-08-29 21:09:34 -07:00
intel-daal
Intel prefixes (#7469)
2018-08-29 21:09:34 -07:00
intel-gpu-tools
…
intel-ipp
Intel prefixes (#7469)
2018-08-29 21:09:34 -07:00
intel-mkl
Intel prefixes (#7469)
2018-08-29 21:09:34 -07:00
intel-mkl-dnn
…
intel-mpi
Intel prefixes (#7469)
2018-08-29 21:09:34 -07:00
intel-parallel-studio
Intel prefixes (#7469)
2018-08-29 21:09:34 -07:00
intel-tbb
update Intel packages (2018.u5 for TBB and 2018.u3 for the others) (#8928)
2018-08-20 07:56:53 -05:00
intel-xed
All git URLs end in .git
2018-07-25 23:10:10 -07:00
intltool
…
ior
…
iozone
…
iperf2
…
iperf3
…
ipopt
ipopt: add debug variant (#9223)
2018-09-14 15:53:25 -07:00
isaac
…
isaac-server
…
isl
…
itstool
…
itsx
…
jackcess
Add MDB driver support to GDAL (#8614)
2018-08-29 12:35:56 -05:00
jags
…
jansson
…
jasper
…
jbigkit
…
jchronoss
…
jdk
jdk: added 10.0.2_13 (#9203)
2018-09-14 17:17:32 -07:00
jellyfish
…
jemalloc
…
jmol
install_tree, copy_tree can install into existing directory structures (#8289)
2018-08-15 09:30:09 -07:00
jq
…
json-c
…
json-cwx
…
json-glib
…
jsoncpp
…
judy
…
julia
…
k8
…
kahip
Replace git=git with explicit branch names
2018-07-25 23:10:10 -07:00
kaiju
…
kaks-calculator
…
kaldi
install_tree, copy_tree can install into existing directory structures (#8289)
2018-08-15 09:30:09 -07:00
kallisto
…
kbproto
…
kdiff3
…
kealib
…
kentutils
…
kibana
Added Kibana package, added Elasticsearch to 6.4.0 (#9239)
2018-09-14 10:50:20 -07:00
kim-api
kim-api: initial commit (#8873)
2018-08-04 16:47:35 -05:00
kmergenie
…
kokkos
…
kraken
…
krb5
…
krims
…
kripke
Update broken codesign.llnl.gov urls (#8880)
2018-08-03 10:25:10 -05:00
kvasir-mpl
…
kvtree
ECP VELOC Package update (#8910)
2018-08-08 21:40:38 -04:00
laghos
Update homepage for laghos (#8864)
2018-08-02 13:03:52 -04:00
lammps
lammps: add v20180822 (#9081)
2018-08-23 12:17:27 -05:00
last
…
latte
Further improvements to version parsing
2018-07-25 23:10:10 -07:00
launchmon
…
lazyten
…
lbann
…
lbxproxy
…
lcals
Update broken codesign.llnl.gov urls (#8880)
2018-08-03 10:25:10 -05:00
lcms
…
ldc
Further improvements to version parsing
2018-07-25 23:10:10 -07:00
ldc-bootstrap
…
legion
…
leveldb
leveldb: Fix header installation (#9069)
2018-08-22 09:46:11 -05:00
lftp
…
libaec
…
libaio
…
libapplewm
…
libarchive
…
libassuan
…
libatomic-ops
…
libbeagle
…
libbeato
…
libbsd
…
libbson
…
libcanberra
…
libcap
…
libceed
…
libcerf
…
libcheck
…
libcint
libcint: New version 3.0.12 (#9003)
2018-08-16 15:59:26 -05:00
libcircle
…
libconfig
Further improvements to version parsing
2018-07-25 23:10:10 -07:00
libcroco
…
libctl
…
libdivsufsort
…
libdmx
…
libdrm
…
libdwarf
libdwarf: remove use of hide_files()
2018-08-02 19:00:52 -07:00
libedit
…
libelf
…
libemos
…
libepoxy
…
libev
Replace git=git with explicit branch names
2018-07-25 23:10:10 -07:00
libevent
…
libevpath
…
libfabric
libfabric: Add develop version option. (#9074)
2018-08-22 14:21:30 -05:00
libffi
Build Python 3.7 with external libffi. (#9245)
2018-09-14 17:07:13 -07:00
libffs
…
libfontenc
…
libfs
…
libgcrypt
…
libgd
…
libgeotiff
…
libgit2
…
libgpg-error
…
libgpuarray
…
libgridxc
install_tree, copy_tree can install into existing directory structures (#8289)
2018-08-15 09:30:09 -07:00
libgtextutils
…
libharu
…
libhio
libhio: add patch for 1.4.1.2 release (#9270)
2018-09-18 17:26:34 -06:00
libiberty
Download GNU packages from mirrors (#8992)
2018-08-15 23:27:21 -07:00
libice
…
libiconv
Download GNU packages from mirrors (#8992)
2018-08-15 23:27:21 -07:00
libint
…
libjpeg
…
libjpeg-turbo
…
libksba
…
liblbxutil
…
liblockfile
…
libmatheval
Download GNU packages from mirrors (#8992)
2018-08-15 23:27:21 -07:00
libmaxminddb
…
libmesh
libMesh: New variant and updated recent versions. (#9186)
2018-09-07 21:13:34 -07:00
libmng
…
libmongoc
libmongoc: Fix build (#9012)
2018-08-17 08:22:30 -05:00
libmonitor
libmonitor: update version and add variant to configure (#8834)
2018-08-03 14:00:12 -04:00
libnbc
…
libnl
…
libnova
…
libogg
…
liboldx
…
libpcap
…
libpciaccess
…
libpfm4
…
libpipeline
…
libpng
libpng package: add version (#9142)
2018-08-31 10:26:13 -07:00
libpsl
…
libpthread-stubs
…
libquo
libquo: Packaging updates. (#9076)
2018-08-22 23:17:15 -05:00
librom
…
libshm
…
libsigcpp
…
libsigsegv
Download GNU packages from mirrors (#8992)
2018-08-15 23:27:21 -07:00
libsm
…
libsodium
…
libspatialindex
…
libsplash
…
libssh
…
libssh2
…
libsvm
…
libszip
…
libtermkey
…
libtiff
…
libtool
Download GNU packages from mirrors (#8992)
2018-08-15 23:27:21 -07:00
libunistring
Download GNU packages from mirrors (#8992)
2018-08-15 23:27:21 -07:00
libunwind
libunwind: add version 1.3-rc1 and variant xz (#8989)
2018-08-17 08:22:04 -05:00
libuuid
…
libuv
…
libvorbis
…
libvterm
…
libwebsockets
…
libwindowswm
…
libx11
…
libxau
…
libxaw
…
libxaw3d
…
libxc
…
libxcb
…
libxcomposite
…
libxcursor
…
libxdamage
…
libxdmcp
…
libxevie
…
libxext
…
libxfixes
…
libxfont
…
libxfont2
…
libxfontcache
…
libxft
…
libxi
…
libxinerama
…
libxkbcommon
…
libxkbfile
…
libxkbui
…
libxml2
…
libxmu
…
libxp
…
libxpm
…
libxpresent
…
libxprintapputil
…
libxprintutil
…
libxrandr
…
libxrender
…
libxres
…
libxscrnsaver
…
libxshmfence
…
libxslt
…
libxsmm
Replace git=git with explicit branch names
2018-07-25 23:10:10 -07:00
libxstream
…
libxt
…
libxtrap
…
libxtst
…
libxv
…
libxvmc
…
libxxf86dga
…
libxxf86misc
…
libxxf86vm
…
libyogrt
…
libzip
…
likwid
LIKWID: Switch to perf_event backend to allow user installations but with limited features (#8886)
2018-08-06 09:21:30 -05:00
linkphase3
…
linux-headers
…
listres
…
llvm
install_tree, copy_tree can install into existing directory structures (#8289)
2018-08-15 09:30:09 -07:00
llvm-openmp-ompt
…
lmdb
…
lmod
lmod: add version 7.8 (#8838)
2018-07-31 23:19:41 -07:00
lndir
…
log4cplus
…
log4cxx
…
loki
…
lordec
…
lrslib
…
lrzip
Replace git=git with explicit branch names
2018-07-25 23:10:10 -07:00
lsof
…
ltrace
…
lua
Add unzip runtime dependency to lua package (#8831)
2018-08-05 13:26:22 -05:00
lua-bitlib
…
lua-jit
…
lua-lpeg
…
lua-luafilesystem
…
lua-luaposix
…
lua-mpack
…
luit
…
lulesh
Update broken codesign.llnl.gov urls (#8880)
2018-08-03 10:25:10 -05:00
lumpy-sv
…
lwgrp
…
lwm2
…
lz4
…
lzma
…
lzo
…
m4
Download GNU packages from mirrors (#8992)
2018-08-15 23:27:21 -07:00
macsio
Add top-level attributes for git M-P packages
2018-07-25 23:10:10 -07:00
mad-numdiff
All git URLs end in .git
2018-07-25 23:10:10 -07:00
mafft
…
magics
…
magma
…
makedepend
…
mallocmc
Add top-level attributes for git M-P packages
2018-07-25 23:10:10 -07:00
man-db
…
manta
…
maq
…
mariadb
…
masa
Add top-level attributes for git M-P packages
2018-07-25 23:10:10 -07:00
masurca
install_tree, copy_tree can install into existing directory structures (#8289)
2018-08-15 09:30:09 -07:00
matio
…
matlab
…
maven
install_tree, copy_tree can install into existing directory structures (#8289)
2018-08-15 09:30:09 -07:00
maverick
…
mawk
…
mbedtls
…
mc
Replace pkg-config dependencies with virtual (#8783)
2018-08-02 13:29:04 -04:00
mcl
…
mdtest
Add top-level attributes for git M-P packages
2018-07-25 23:10:10 -07:00
med
…
meep
…
mefit
install_tree, copy_tree can install into existing directory structures (#8289)
2018-08-15 09:30:09 -07:00
megahit
…
memaxes
…
meme
…
memkind
…
meraculous
Add top-level attributes for git M-P packages
2018-07-25 23:10:10 -07:00
mercurial
…
mesa
Add libs attribute to mesa and mesa-glu packages (#8904)
2018-08-07 10:18:05 +02:00
mesa-glu
Add libs attribute to mesa and mesa-glu packages (#8904)
2018-08-07 10:18:05 +02:00
meshkit
…
meson
…
mesquite
…
metabat
…
metaphysicl
…
metasv
metasv: add required dependencies (#9254)
2018-09-14 15:49:11 -07:00
metis
…
mfem
install_tree, copy_tree can install into existing directory structures (#8289)
2018-08-15 09:30:09 -07:00
microbiomeutil
…
minced
…
mindthegap
Add top-level attributes for git M-P packages
2018-07-25 23:10:10 -07:00
miniaero
Add top-level attributes for git M-P packages
2018-07-25 23:10:10 -07:00
miniamr
miniamr: added v1.4.1 (#9225)
2018-09-14 16:56:59 -07:00
miniasm
Add top-level attributes for git M-P packages
2018-07-25 23:10:10 -07:00
miniconda2
…
miniconda3
…
minife
…
minighost
…
minigmg
…
minimap2
…
minimd
…
miniqmc
miniQMC: add newer releases and ecp-proxy-app tag (#9233)
2018-09-14 15:54:21 -07:00
minisign
…
minismac2d
…
minitri
…
minixyce
…
minuit
…
mira
…
mirdeep2
…
mitofates
…
mitos
Add top-level attributes for git M-P packages
2018-07-25 23:10:10 -07:00
mkfontdir
…
mkfontscale
…
mlhka
Add top-level attributes for git M-P packages
2018-07-25 23:10:10 -07:00
moab
…
modern-wheel
…
mofem-cephas
Add top-level attributes for git M-P packages
2018-07-25 23:10:10 -07:00
mofem-fracture-module
Add top-level attributes for git M-P packages
2018-07-25 23:10:10 -07:00
mofem-minimal-surface-equation
Add top-level attributes for git M-P packages
2018-07-25 23:10:10 -07:00
mofem-users-modules
…
molcas
…
mono
…
mosh
…
mothur
…
motif
…
motioncor2
motioncor2 - added version 1.1.0 and removed old, unlisted versions (#9229)
2018-09-14 13:57:22 -07:00
mount-point-attributes
add fgfs variant to stat and develop version (#8919)
2018-08-09 10:56:08 -05:00
mozjs
…
mpark-variant
…
mpc
Download GNU packages from mirrors (#8992)
2018-08-15 23:27:21 -07:00
mpe2
…
mpest
…
mpfr
Download GNU packages from mirrors (#8992)
2018-08-15 23:27:21 -07:00
mpibash
…
mpiblast
…
mpich
Add top-level attributes for git M-P packages
2018-07-25 23:10:10 -07:00
mpifileutils
mpifileutils: add v0.8 (#9152)
2018-09-03 20:34:07 -05:00
mpilander
Add top-level attributes for git M-P packages
2018-07-25 23:10:10 -07:00
mpileaks
…
mpip
…
mpir
Replace git=git with explicit branch names
2018-07-25 23:10:10 -07:00
mpix-launch-swift
install_tree, copy_tree can install into existing directory structures (#8289)
2018-08-15 09:30:09 -07:00
mrbayes
Add top-level attributes for git M-P packages
2018-07-25 23:10:10 -07:00
mrnet
Replace git=git with explicit branch names
2018-07-25 23:10:10 -07:00
mrtrix3
install_tree, copy_tree can install into existing directory structures (#8289)
2018-08-15 09:30:09 -07:00
mscgen
…
msgpack-c
msgpack-c, snappy: explicitly depend on googletest (#9167)
2018-09-03 20:25:17 -05:00
mshadow
Add top-level attributes for git M-P packages
2018-07-25 23:10:10 -07:00
multitail
…
multiverso
Add top-level attributes for git M-P packages
2018-07-25 23:10:10 -07:00
mummer
…
mumps
Change MUMPS to allow it to build with clang+xlf compiler combination (#8388)
2018-08-02 14:23:37 -04:00
munge
…
muparser
…
muscle
…
muse
…
muster
…
mvapich2
mvapich2: Use rdma-core for mrail and nemesis*ib* fabrics (#9072)
2018-08-23 07:32:46 -05:00
mxml
…
mxnet
mxnet: added 1.3.0 (#9236)
2018-09-14 11:01:30 -07:00
nag
…
nalu
Add top-level attributes for git M-P packages
2018-07-25 23:10:10 -07:00
nalu-wind
Add top-level attributes for git M-P packages
2018-07-25 23:10:10 -07:00
namd
Charmpp: rename charm to charmpp according to ++ conventions (#9216)
2018-09-14 17:01:07 -07:00
nano
…
nanoflann
…
nanopb
…
nasm
…
nauty
…
ncbi-magicblast
…
ncbi-rmblastn
…
ncbi-toolkit
…
nccl
…
nccmp
…
ncdu
…
ncftp
…
ncl
install_tree, copy_tree can install into existing directory structures (#8289)
2018-08-15 09:30:09 -07:00
nco
…
ncurses
Download GNU packages from mirrors (#8992)
2018-08-15 23:27:21 -07:00
ncview
…
ndiff
…
nek5000
Add top-level attributes for git M-P packages
2018-07-25 23:10:10 -07:00
nekbone
fix for issue #8845 (#8988)
2018-08-16 13:22:44 -06:00
nekcem
Add top-level attributes for git M-P packages
2018-07-25 23:10:10 -07:00
nektar
…
neovim
package neovim: add info for version 0.3.1 (#8866)
2018-08-02 13:04:59 -04:00
nest
New package: NEST Simulator (#9092)
2018-08-29 13:30:29 -04:00
netcdf
…
netcdf-cxx
…
netcdf-cxx4
…
netcdf-fortran
netcdf-fortran: enforce autoreconf when building with NAG. (#8844)
2018-08-02 08:32:20 -05:00
netgauge
…
netgen
…
netlib-lapack
Small patch for netlib-lapack. (#8854)
2018-08-01 18:55:07 -05:00
netlib-scalapack
…
netlib-xblas
…
nettle
Download GNU packages from mirrors (#8992)
2018-08-15 23:27:21 -07:00
neuron
Replace pkg-config dependencies with virtual (#8783)
2018-08-02 13:29:04 -04:00
nextflow
…
nfft
…
nghttp2
…
nginx
…
ngmlr
…
ninja
…
ninja-fortran
…
nlohmann-json
…
nlopt
nlopt: Only support release>=2.5.0, since earlier release tarballs were actually AutoTools, not CMake. (#9110)
2018-09-03 20:56:48 -05:00
nmap
…
nnvm
Add top-level attributes for git M-P packages
2018-07-25 23:10:10 -07:00
node-js
…
notmuch
…
npb
…
npm
…
npth
…
nspr
…
numactl
…
numdiff
…
nut
Add top-level attributes for git M-P packages
2018-07-25 23:10:10 -07:00
nwchem
NWChem 6.8.1 (#9140)
2018-09-03 20:36:49 -05:00
ocaml
…
occa
install_tree, copy_tree can install into existing directory structures (#8289)
2018-08-15 09:30:09 -07:00
oce
…
oclint
…
oclock
…
octave
Java updates: new versions, classpath, and JAVA_HOME (#8613)
2018-08-28 14:35:13 -04:00
octave-optim
…
octave-splines
…
octave-struct
…
octopus
…
of-adios-write
Add top-level attributes for git M-P packages
2018-07-25 23:10:10 -07:00
of-precice
Add top-level attributes for git M-P packages
2018-07-25 23:10:10 -07:00
omega-h
omega-h: add versions and variants (#9169)
2018-09-05 11:01:45 -07:00
ompss
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ompt-openmp
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oniguruma
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ont-albacore
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opa-psm2
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opam
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opari2
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openbabel
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openblas
openblas: add @0.3.1, patch CMake export bug in @0.3.1:0.3.2 (#9123)
2018-09-03 20:49:45 -05:00
opencoarrays
OpenCoarrays: update v2.2.0 (#9215)
2018-09-14 16:59:19 -07:00
opencv
add opencv@3.4.3 (#9213)
2018-09-14 17:05:05 -07:00
openexr
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openfast
Add top-level attributes for git M-P packages
2018-07-25 23:10:10 -07:00
openfoam-com
patch for OF.com@18.06 to correctly find KAHIP (#8982)
2018-08-26 19:44:06 -05:00
openfoam-org
install_tree: symlink handling and add 'ignore' option (#9019)
2018-08-17 22:08:38 -04:00
openfst
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opengl
Add libs attribute to mesa and mesa-glu packages (#8904)
2018-08-07 10:18:05 +02:00
openglu
Add libs attribute to mesa and mesa-glu packages (#8904)
2018-08-07 10:18:05 +02:00
openjpeg
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openmc
Add top-level attributes for git M-P packages
2018-07-25 23:10:10 -07:00
openmpi
Java updates: new versions, classpath, and JAVA_HOME (#8613)
2018-08-28 14:35:13 -04:00
opennurbs
Add top-level attributes for git M-P packages
2018-07-25 23:10:10 -07:00
openpmd-api
openPMD-api: ^py-numpy@1.15+ (#9178)
2018-09-06 10:41:45 +02:00
openscenegraph
…
openslide
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openspeedshop
Update openspeedshop and cbtf version numbers (#9150)
2018-09-03 20:35:25 -05:00
openspeedshop-utils
Update openspeedshop and cbtf version numbers (#9150)
2018-09-03 20:35:25 -05:00
openssh
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openssl
Build Python 3.7 with external libffi. (#9245)
2018-09-14 17:07:13 -07:00
opium
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optional-lite
Adds a package for optional-lite header-only library (#9117)
2018-08-29 18:14:59 +02:00
opus
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orfm
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orthofinder
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orthomcl
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osu-micro-benchmarks
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otf
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otf2
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p4est
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p7zip
…
pacbio-daligner
Add top-level attributes for git M-P packages
2018-07-25 23:10:10 -07:00
pacbio-damasker
Add top-level attributes for git M-P packages
2018-07-25 23:10:10 -07:00
pacbio-dazz-db
Add top-level attributes for git M-P packages
2018-07-25 23:10:10 -07:00
pacbio-dextractor
Add top-level attributes for git M-P packages
2018-07-25 23:10:10 -07:00
pagit
…
pagmo
…
paml
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panda
…
pandaseq
Replace pkg-config dependencies with virtual (#8783)
2018-08-02 13:29:04 -04:00
pango
…
pangomm
…
papi
papi: Update to 5.6.0 and fix build with %gcc@8 (#8796)
2018-07-26 10:02:07 -05:00
papyrus
Add top-level attributes for git M-P packages
2018-07-25 23:10:10 -07:00
paradiseo
Add top-level attributes for git M-P packages
2018-07-25 23:10:10 -07:00
parallel
Download GNU packages from mirrors (#8992)
2018-08-15 23:27:21 -07:00
parallel-netcdf
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paraver
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paraview
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parmetis
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parmgridgen
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parquet
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parsimonator
Add top-level attributes for git M-P packages
2018-07-25 23:10:10 -07:00
parsplice
Add top-level attributes for git M-P packages
2018-07-25 23:10:10 -07:00
partitionfinder
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patch
Download GNU packages from mirrors (#8992)
2018-08-15 23:27:21 -07:00
patchelf
…
pathfinder
…
pax-utils
…
pbbam
…
pbmpi
Add top-level attributes for git M-P packages
2018-07-25 23:10:10 -07:00
pcma
…
pcre
…
pcre2
…
pdf2svg
…
pdftk
…
pdsh
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pdt
…
pegtl
Further improvements to version parsing
2018-07-25 23:10:10 -07:00
pennant
…
percept
Add top-level attributes for git M-P packages
2018-07-25 23:10:10 -07:00
perl
…
perl-algorithm-diff
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perl-app-cmd
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perl-array-utils
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perl-b-hooks-endofscope
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perl-bio-perl
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perl-bit-vector
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perl-cairo
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perl-capture-tiny
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perl-carp-clan
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perl-class-data-inheritable
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perl-class-inspector
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perl-class-load
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perl-class-load-xs
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perl-compress-raw-bzip2
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perl-compress-raw-zlib
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perl-contextual-return
Further improvements to version parsing
2018-07-25 23:10:10 -07:00
perl-cpan-meta-check
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perl-data-optlist
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perl-data-stag
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perl-dbd-mysql
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perl-dbfile
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perl-dbi
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perl-devel-cycle
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perl-devel-globaldestruction
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perl-devel-overloadinfo
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perl-devel-stacktrace
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perl-digest-md5
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perl-dist-checkconflicts
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perl-encode-locale
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perl-eval-closure
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perl-exception-class
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perl-exporter-tiny
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perl-extutils-depends
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perl-extutils-makemaker
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perl-extutils-pkgconfig
Replace pkg-config dependencies with virtual (#8783)
2018-08-02 13:29:04 -04:00
perl-file-copy-recursive
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perl-file-listing
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perl-file-pushd
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perl-file-sharedir-install
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perl-file-slurp-tiny
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perl-file-slurper
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perl-file-which
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perl-font-ttf
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perl-gd
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perl-gd-graph
Further improvements to version parsing
2018-07-25 23:10:10 -07:00
perl-gd-text
…
perl-gdgraph-histogram
perl-gdgraph-histogram: new package (#9250)
2018-09-14 15:50:18 -07:00
perl-graph
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perl-graph-readwrite
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perl-html-parser
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perl-html-tagset
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perl-http-cookies
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perl-http-daemon
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perl-http-date
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perl-http-message
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perl-http-negotiate
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perl-inline
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perl-inline-c
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perl-intervaltree
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perl-io-compress
Further improvements to version parsing
2018-07-25 23:10:10 -07:00
perl-io-html
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perl-io-sessiondata
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perl-io-socket-ssl
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perl-io-string
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perl-json
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perl-libwww-perl
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perl-list-moreutils
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perl-log-log4perl
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perl-lwp
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perl-lwp-mediatypes
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perl-lwp-protocol-https
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perl-math-cdf
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perl-math-cephes
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perl-math-matrixreal
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perl-module-build
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perl-module-implementation
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perl-module-runtime
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perl-module-runtime-conflicts
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perl-moose
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perl-mozilla-ca
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perl-mro-compat
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perl-namespace-clean
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perl-net-http
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perl-net-scp-expect
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perl-net-ssleay
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perl-package-deprecationmanager
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perl-package-stash
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perl-package-stash-xs
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perl-padwalker
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perl-parallel-forkmanager
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perl-params-util
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perl-parse-recdescent
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perl-pdf-api2
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perl-pegex
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perl-perl6-slurp
perl6-slurp: new package (#8672)
2018-08-09 10:35:54 -05:00
perl-perlio-gzip
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perl-perlio-utf8-strict
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perl-soap-lite
Further improvements to version parsing
2018-07-25 23:10:10 -07:00
perl-star-fusion
perl-star-fusion package: update latest version (#9104)
2018-08-28 13:22:18 -04:00
perl-statistics-descriptive
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perl-statistics-pca
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perl-sub-exporter
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perl-sub-exporter-progressive
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perl-sub-identify
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perl-sub-install
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perl-sub-name
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perl-sub-uplevel
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perl-svg
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perl-swissknife
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perl-task-weaken
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perl-term-readkey
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perl-test-cleannamespaces
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perl-test-deep
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perl-test-differences
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perl-test-exception
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perl-test-fatal
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perl-test-memory-cycle
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perl-test-most
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perl-test-needs
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perl-test-requires
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perl-test-requiresinternet
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perl-test-warn
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perl-test-warnings
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perl-text-csv
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perl-text-diff
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perl-text-simpletable
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perl-text-soundex
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perl-text-unidecode
…
perl-time-hires
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perl-time-piece
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perl-try-tiny
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perl-uri
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perl-uri-escape
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perl-version
Further improvements to version parsing
2018-07-25 23:10:10 -07:00
perl-want
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perl-www-robotrules
…
perl-xml-libxml
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perl-xml-parser
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perl-xml-parser-lite
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perl-xml-simple
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perl-yaml-libyaml
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petsc
petsc: fix compilation with intel (#9198)
2018-09-12 11:18:41 -07:00
pexsi
install_tree, copy_tree can install into existing directory structures (#8289)
2018-08-15 09:30:09 -07:00
pfft
…
pflotran
Add top-level attributes for git M-P packages
2018-07-25 23:10:10 -07:00
pfunit
…
pgdspider
…
pgi
…
pgmath
Package/flang: Updated to use own version of llvm (#8766)
2018-08-03 20:35:09 -04:00
phantompeakqualtools
…
phast
…
phasta
Add top-level attributes for git M-P packages
2018-07-25 23:10:10 -07:00
phist
Phist 1.6.1 (#8933)
2018-08-10 12:53:18 -05:00
phylip
…
picard
install_tree, copy_tree can install into existing directory structures (#8289)
2018-08-15 09:30:09 -07:00
pidx
Add top-level attributes for git M-P packages
2018-07-25 23:10:10 -07:00
pigz
…
pilon
install_tree, copy_tree can install into existing directory structures (#8289)
2018-08-15 09:30:09 -07:00
pindel
install_tree, copy_tree can install into existing directory structures (#8289)
2018-08-15 09:30:09 -07:00
piranha
Replace git=git with explicit branch names
2018-07-25 23:10:10 -07:00
pism
Add top-level attributes for git M-P packages
2018-07-25 23:10:10 -07:00
pixman
…
pkg-config
…
pkgconf
…
planck-likelihood
…
plasma
…
platypus
…
plink
…
plplot
…
plumed
plumed: updating plumed to latest version (#9227)
2018-09-14 17:13:22 -07:00
pmgr-collective
…
pmix
…
pnfft
…
pngwriter
Add top-level attributes for git M-P packages
2018-07-25 23:10:10 -07:00
pnmpi
…
poamsa
…
pocl
Update the pocl package (#9090)
2018-08-24 12:26:17 -05:00
polymake
…
poppler
All git URLs end in .git
2018-07-25 23:10:10 -07:00
poppler-data
…
porta
…
portage
Add top-level attributes for git M-P packages
2018-07-25 23:10:10 -07:00
portcullis
portcullis: new package starting at 1.1.2 (#9218)
2018-09-14 15:55:58 -07:00
postgresql
…
ppl
…
prank
…
precice
Add top-level attributes for git M-P packages
2018-07-25 23:10:10 -07:00
presentproto
…
preseq
…
price
…
primer3
…
prinseq-lite
…
printproto
…
prng
…
probconsrna
…
prodigal
…
proj
…
protobuf
…
proxymngr
…
pruners-ninja
…
ps-lite
Add top-level attributes for git M-P packages
2018-07-25 23:10:10 -07:00
psi4
…
pslib
…
psm
Add top-level attributes for git M-P packages
2018-07-25 23:10:10 -07:00
psmc
Add top-level attributes for git M-P packages
2018-07-25 23:10:10 -07:00
pstreams
…
pugixml
…
pumi
Add top-level attributes for git M-P packages
2018-07-25 23:10:10 -07:00
pv
…
pvm
…
pxz
Replace git=git with explicit branch names
2018-07-25 23:10:10 -07:00
py-3to2
…
py-4suite-xml
…
py-abipy
…
py-adios
Add top-level attributes for git M-P packages
2018-07-25 23:10:10 -07:00
py-affine
…
py-alabaster
…
py-apache-libcloud
…
py-apipkg
…
py-appdirs
…
py-appnope
…
py-apscheduler
…
py-argcomplete
…
py-argparse
…
py-ase
…
py-asn1crypto
…
py-astroid
…
py-astropy
…
py-atomicwrites
Update to latest version of pytest and dependencies (#9087)
2018-08-25 14:12:46 -05:00
py-attrs
…
py-autopep8
…
py-avro
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py-avro-json-serializer
…
py-babel
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py-backcall
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py-backports-abc
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py-backports-functools-lru-cache
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py-backports-shutil-get-terminal-size
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py-backports-ssl-match-hostname
…
py-basemap
…
py-bcbio-gff
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py-beautifulsoup4
…
py-binwalk
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py-biom-format
Package py-biom-format fixes (#8727)
2018-08-02 13:51:51 -04:00
py-biopython
…
py-bitarray
…
py-bitstring
…
py-bleach
…
py-blessings
…
py-bokeh
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py-boltons
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py-bottleneck
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py-breakseq2
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py-brian
…
py-brian2
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py-bsddb3
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py-bx-python
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py-cartopy
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py-cclib
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py-cdat-lite
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py-cdo
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py-certifi
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py-cffi
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py-chardet
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py-checkm-genome
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py-cheetah
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py-click
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py-cligj
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py-cloudpickle
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py-cnvkit
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py-cogent
Feature/py pycogent New-Version (#9095)
2018-09-04 14:34:18 -05:00
py-colorama
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py-colormath
py-colormath: new version, requires newer networkx (#9237)
2018-09-14 10:35:45 -07:00
py-configparser
…
py-counter
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py-coverage
…
py-cpuinfo
…
py-crispresso
…
py-crossmap
py-crossmap: needs py-setuptools (#8898)
2018-08-06 17:43:14 -05:00
py-cryptography
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py-csvkit
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py-current
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py-cutadapt
…
py-cvxopt
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py-cycler
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py-cython
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py-dask
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py-dateutil
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py-dbf
…
py-decorator
py-decorator: new version (#9240)
2018-09-14 15:51:43 -07:00
py-deeptools
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py-dendropy
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py-dill
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py-discover
…
py-dlcpar
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py-docopt
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py-docutils
…
py-doxypy
…
py-doxypypy
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py-dryscrape
Add top-level attributes for git M-P packages
2018-07-25 23:10:10 -07:00
py-dxchange
…
py-dxfile
…
py-easybuild-easyblocks
…
py-easybuild-easyconfigs
…
py-easybuild-framework
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py-edffile
Add top-level attributes for git M-P packages
2018-07-25 23:10:10 -07:00
py-editdistance
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py-elasticsearch
…
py-elephant
…
py-emcee
…
py-entrypoints
…
py-enum34
…
py-epydoc
…
py-espresso
py-espresso: apply patch to v4.0.0 only (#9196)
2018-09-13 10:00:21 +00:00
py-espressopp
Add top-level attributes for git M-P packages
2018-07-25 23:10:10 -07:00
py-et-xmlfile
…
py-eventlet
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py-execnet
…
py-fastaindex
…
py-fasteners
…
py-faststructure
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py-filelock
py-filelock: new package (#9136)
2018-08-31 11:21:55 -07:00
py-fiscalyear
Add top-level attributes for git M-P packages
2018-07-25 23:10:10 -07:00
py-flake8
…
py-flake8-polyfill
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py-flask
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py-flask-compress
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py-flask-socketio
…
py-flexx
…
py-fn
…
py-fparser
Add top-level attributes for git M-P packages
2018-07-25 23:10:10 -07:00
py-funcsigs
Update to latest version of pytest and dependencies (#9087)
2018-08-25 14:12:46 -05:00
py-functools32
…
py-future
…
py-futures
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py-gdbgui
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py-genders
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py-genshi
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py-gevent
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py-git2
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py-git-review
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py-gnuplot
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py-goatools
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py-gpaw
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py-greenlet
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py-griddataformats
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py-guidata
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py-guiqwt
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py-h5py
py-h5py: add version 2.8.0 (#9231)
2018-09-14 15:56:44 -07:00
py-html2text
…
py-html5lib
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py-htseq
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py-httpbin
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py-hypothesis
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py-idna
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py-igraph
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py-illumina-utils
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py-imageio
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py-imagesize
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py-iminuit
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py-importlib
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py-ipaddress
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py-ipdb
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py-ipykernel
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py-ipython
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py-ipython-genutils
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py-ipywidgets
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py-isort
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py-itsdangerous
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py-jdcal
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py-jedi
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py-jinja2
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py-joblib
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py-jpype
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py-jsonschema
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py-junit-xml
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py-jupyter-client
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py-jupyter-console
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py-jupyter-core
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py-jupyter-notebook
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py-keras
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py-kiwisolver
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py-lark-parser
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py-latexcodec
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py-lazy
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py-lazy-object-proxy
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py-lazy-property
Adding lazy property python module (#47) (#8867)
2018-08-02 11:44:16 -05:00
py-lazyarray
…
py-libconf
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py-libensemble
Update py-libensemble package to v0.3.0 (#9210)
2018-09-14 17:15:31 -07:00
py-line-profiler
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py-linecache2
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py-lit
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py-llvmlite
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py-lmfit
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py-localcider
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py-locket
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py-lockfile
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py-logilab-common
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py-lrudict
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py-lxml
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py-lzstring
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py-macholib
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py-machotools
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py-macs2
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py-maestrowf
py-maestrowf: Addition of new releases. (#9135)
2018-09-04 14:33:55 -05:00
py-mako
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py-mappy
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py-markdown
py-markdown: fix url and hashes (#9235)
2018-09-14 15:51:20 -07:00
py-markupsafe
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py-matplotlib
py-matplotlib: incorporate 8532 w/ version range (#9151)
2018-09-03 20:34:41 -05:00
py-mccabe
…
py-mdanalysis
…
py-meep
…
py-memory-profiler
…
py-methylcode
…
py-mg-rast-tools
Add top-level attributes for git M-P packages
2018-07-25 23:10:10 -07:00
py-misopy
…
py-mistune
…
py-mock
…
py-moltemplate
…
py-mongo
…
py-monotonic
…
py-monty
…
py-more-itertools
Update to latest version of pytest and dependencies (#9087)
2018-08-25 14:12:46 -05:00
py-mpi4py
Add top-level attributes for git M-P packages
2018-07-25 23:10:10 -07:00
py-mpmath
…
py-multiprocess
…
py-multiqc
py-multiqc: needs newer py-spectra (#9226)
2018-09-14 15:52:29 -07:00
py-mx
…
py-mxnet
…
py-myhdl
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py-mysqldb1
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py-natsort
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py-nbconvert
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py-nbformat
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py-neo
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py-nestle
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py-netcdf4
…
py-netifaces
…
py-networkx
py-networkx: new version (#9241)
2018-09-14 15:52:02 -07:00
py-nose
…
py-nosexcover
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py-numba
Updated llvm to version 6.0.1. The previous 6.0.0 had an incorrectly … (#8801)
2018-07-26 17:47:18 -05:00
py-numexpr
…
py-numexpr3
…
py-numpy
Update to latest version of pytest and dependencies (#9087)
2018-08-25 14:12:46 -05:00
py-numpydoc
…
py-olefile
…
py-ont-fast5-api
…
py-openpmd-validator
…
py-openpyxl
…
py-openslide-python
…
py-opentuner
Add top-level attributes for git M-P packages
2018-07-25 23:10:10 -07:00
py-ordereddict
…
py-oset
…
py-owslib
…
py-packaging
…
py-palettable
…
py-pandas
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py-paramiko
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py-partd
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py-pathlib2
Update to latest version of pytest and dependencies (#9087)
2018-08-25 14:12:46 -05:00
py-pathos
…
py-pathspec
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py-patsy
…
py-pbr
…
py-pep8-naming
…
py-perf
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py-performance
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py-periodictable
…
py-petsc4py
…
py-pexpect
…
py-phonopy
…
py-pickleshare
…
py-picrust
Feature/py picrust (#9184)
2018-09-14 17:24:17 -07:00
py-pil
…
py-pillow
…
py-pip
…
py-pipits
…
py-pkgconfig
…
py-plotly
…
py-pluggy
Update to latest version of pytest and dependencies (#9087)
2018-08-25 14:12:46 -05:00
py-ply
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py-pmw
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py-poster
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py-pox
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py-ppft
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py-prettytable
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py-proj
Add top-level attributes for git M-P packages
2018-07-25 23:10:10 -07:00
py-projectq
Add top-level attributes for git M-P packages
2018-07-25 23:10:10 -07:00
py-prompt-toolkit
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py-protobuf
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py-psutil
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py-psyclone
Add top-level attributes for git M-P packages
2018-07-25 23:10:10 -07:00
py-ptyprocess
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py-pudb
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py-py
Update to latest version of pytest and dependencies (#9087)
2018-08-25 14:12:46 -05:00
py-py2bit
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py-py2cairo
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py-py2neo
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py-py4j
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py-pyani
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py-pyasn1
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py-pybedtools
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py-pybigwig
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py-pybind11
Add top-level attributes for git M-P packages
2018-07-25 23:10:10 -07:00
py-pybtex
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py-pybtex-docutils
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py-pychecker
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py-pycodestyle
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py-pycparser
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py-pycrypto
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py-pycurl
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py-pydatalog
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py-pydispatcher
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py-pydot
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py-pyelftools
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py-pyepsg
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py-pyfaidx
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py-pyfasta
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py-pyfftw
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py-pyflakes
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py-pygdbmi
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py-pygments
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py-pygobject
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py-pygpu
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py-pygtk
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py-pylint
Further improvements to version parsing
2018-07-25 23:10:10 -07:00
py-pymatgen
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py-pyminifier
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py-pymol
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py-pympler
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py-pymysql
py-pymysql: new package (#9122)
2018-09-03 20:50:39 -05:00
py-pynn
Add top-level attributes for git M-P packages
2018-07-25 23:10:10 -07:00
py-pypar
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py-pyparsing
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py-pypeflow
Add top-level attributes for git M-P packages
2018-07-25 23:10:10 -07:00
py-pyprof2html
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py-pyqi
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py-pyqt
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py-pyrad
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py-pysam
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py-pyscaf
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py-pyserial
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py-pyshp
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py-pyside
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py-pysocks
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py-pysqlite
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py-pytables
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py-pytest
Update to latest version of pytest and dependencies (#9087)
2018-08-25 14:12:46 -05:00
py-pytest-cov
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py-pytest-flake8
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py-pytest-httpbin
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py-pytest-mock
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py-pytest-runner
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py-pytest-xdist
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py-python-daemon
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py-python-engineio
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py-python-gitlab
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py-python-levenshtein
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py-python-socketio
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py-pythonqwt
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py-pytorch
Add top-level attributes for git M-P packages
2018-07-25 23:10:10 -07:00
py-pytz
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py-pyutilib
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py-pyvcf
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py-pywavelets
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py-pyyaml
added version for kull support (#9141)
2018-09-03 20:36:15 -05:00
py-qtawesome
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py-qtconsole
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py-qtpy
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py-quantities
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py-quast
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py-radical-utils
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py-ranger
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py-rasterio
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py-readme-renderer
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py-regex
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py-reportlab
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py-requests
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py-requests-toolbelt
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py-restview
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py-rope
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py-rpy2
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py-rsa
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py-rseqc
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py-rtree
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py-saga-python
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py-scandir
Update to latest version of pytest and dependencies (#9087)
2018-08-25 14:12:46 -05:00
py-scientificpython
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py-scikit-image
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py-scikit-learn
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py-scipy
Update to latest version of pytest and dependencies (#9087)
2018-08-25 14:12:46 -05:00
py-seaborn
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py-setuptools
Update to latest version of pytest and dependencies (#9087)
2018-08-25 14:12:46 -05:00
py-setuptools-git
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py-setuptools-scm
Update to latest version of pytest and dependencies (#9087)
2018-08-25 14:12:46 -05:00
py-sfepy
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py-sh
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py-shapely
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py-shiboken
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py-simplegeneric
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py-simplejson
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py-singledispatch
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py-sip
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py-six
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py-slepc4py
…
py-slurm-pipeline
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py-sncosmo
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py-snowballstemmer
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py-snuggs
…
py-spectra
py-spectra: new version (#9224)
2018-09-14 16:59:50 -07:00
py-spefile
Add top-level attributes for git M-P packages
2018-07-25 23:10:10 -07:00
py-spglib
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py-sphinx
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py-sphinx-bootstrap-theme
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py-sphinx-rtd-theme
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py-sphinxcontrib-bibtex
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py-sphinxcontrib-programoutput
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py-sphinxcontrib-websupport
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py-spyder
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py-spykeutils
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py-sqlalchemy
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py-statsmodels
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py-stevedore
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py-storm
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py-subprocess32
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py-symengine
Replace git=git with explicit branch names
2018-07-25 23:10:10 -07:00
py-symfit
…
py-sympy
…
py-tabulate
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py-tappy
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py-terminado
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py-testinfra
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py-tetoolkit
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py-theano
Add top-level attributes for git M-P packages
2018-07-25 23:10:10 -07:00
py-tifffile
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py-toml
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py-tomopy
…
py-toolz
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py-tornado
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py-tqdm
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py-traceback2
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py-traitlets
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py-tuiview
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py-twisted
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py-typing
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py-tzlocal
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py-udunits
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py-umi-tools
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py-unittest2
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py-unittest2py3k
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py-urllib3
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py-urwid
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py-vcversioner
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py-virtualenv
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py-virtualenv-clone
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py-virtualenvwrapper
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py-vmd-python
added py-setuptools as dependency (#8843)
2018-08-02 11:24:26 -05:00
py-vsc-base
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py-vsc-install
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py-wcsaxes
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py-wcwidth
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py-webkit-server
Add top-level attributes for git M-P packages
2018-07-25 23:10:10 -07:00
py-weblogo
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py-werkzeug
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py-wheel
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py-widgetsnbextension
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py-wrapt
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py-xarray
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py-xattr
Add top-level attributes for git M-P packages
2018-07-25 23:10:10 -07:00
py-xlrd
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py-xlsxwriter
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py-xmlrunner
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py-xopen
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py-xpyb
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py-xvfbwrapper
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py-yamlreader
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py-yapf
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py-yt
Add top-level attributes for git M-P packages
2018-07-25 23:10:10 -07:00
py-zmq
…
py-zope-event
…
py-zope-interface
…
python
Build Python 3.7 with external libffi. (#9245)
2018-09-14 17:07:13 -07:00
qbank
…
qbox
install_tree, copy_tree can install into existing directory structures (#8289)
2018-08-15 09:30:09 -07:00
qhull
…
qmcpack
QMCPACK Spack Package Update (Summer 2018) (#9008)
2018-08-18 11:26:17 -05:00
qmd-progress
Add top-level attributes for git M-P packages
2018-07-25 23:10:10 -07:00
qorts
install_tree, copy_tree can install into existing directory structures (#8289)
2018-08-15 09:30:09 -07:00
qrupdate
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qt
…
qt-creator
…
qtgraph
qtgraph and cbtf-argonavis create proper library paths in modules (#8797)
2018-08-17 15:58:08 -07:00
qthreads
…
quantum-espresso
Further improvements to version parsing
2018-07-25 23:10:10 -07:00
quinoa
Charmpp: rename charm to charmpp according to ++ conventions (#9216)
2018-09-14 17:01:07 -07:00
qwt
…
r
install_tree, copy_tree can install into existing directory structures (#8289)
2018-08-15 09:30:09 -07:00
r-a4
Add top-level attributes for git R (Bioconductor) packages
2018-07-25 23:10:10 -07:00
r-a4base
Add top-level attributes for git R (Bioconductor) packages
2018-07-25 23:10:10 -07:00
r-a4classif
Add top-level attributes for git R (Bioconductor) packages
2018-07-25 23:10:10 -07:00
r-a4core
Add top-level attributes for git R (Bioconductor) packages
2018-07-25 23:10:10 -07:00
r-a4preproc
Add top-level attributes for git R (Bioconductor) packages
2018-07-25 23:10:10 -07:00
r-a4reporting
Add top-level attributes for git R (Bioconductor) packages
2018-07-25 23:10:10 -07:00
r-abadata
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r-abaenrichment
Add top-level attributes for git R (Bioconductor) packages
2018-07-25 23:10:10 -07:00
r-abind
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r-absseq
Add top-level attributes for git R (Bioconductor) packages
2018-07-25 23:10:10 -07:00
r-acde
…
r-acepack
…
r-acgh
Add top-level attributes for git R (Bioconductor) packages
2018-07-25 23:10:10 -07:00
r-acme
Add top-level attributes for git R (Bioconductor) packages
2018-07-25 23:10:10 -07:00
r-ada
…
r-adabag
…
r-ade4
…
r-adegenet
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r-adsplit
Add top-level attributes for git R (Bioconductor) packages
2018-07-25 23:10:10 -07:00
r-aer
…
r-affxparser
Add top-level attributes for git R (Bioconductor) packages
2018-07-25 23:10:10 -07:00
r-affy
Add top-level attributes for git R (Bioconductor) packages
2018-07-25 23:10:10 -07:00
r-affycomp
Add top-level attributes for git R (Bioconductor) packages
2018-07-25 23:10:10 -07:00
r-affycompatible
Add top-level attributes for git R (Bioconductor) packages
2018-07-25 23:10:10 -07:00
r-affycontam
Add top-level attributes for git R (Bioconductor) packages
2018-07-25 23:10:10 -07:00
r-affycoretools
Add top-level attributes for git R (Bioconductor) packages
2018-07-25 23:10:10 -07:00
r-affydata
…
r-affyexpress
Add top-level attributes for git R (Bioconductor) packages
2018-07-25 23:10:10 -07:00
r-affyilm
Add top-level attributes for git R (Bioconductor) packages
2018-07-25 23:10:10 -07:00
r-affyio
Add top-level attributes for git R (Bioconductor) packages
2018-07-25 23:10:10 -07:00
r-affypdnn
Add top-level attributes for git R (Bioconductor) packages
2018-07-25 23:10:10 -07:00
r-affyplm
Add top-level attributes for git R (Bioconductor) packages
2018-07-25 23:10:10 -07:00
r-affyqcreport
Add top-level attributes for git R (Bioconductor) packages
2018-07-25 23:10:10 -07:00
r-affyrnadegradation
Add top-level attributes for git R (Bioconductor) packages
2018-07-25 23:10:10 -07:00
r-agdex
Add top-level attributes for git R (Bioconductor) packages
2018-07-25 23:10:10 -07:00
r-agilp
Add top-level attributes for git R (Bioconductor) packages
2018-07-25 23:10:10 -07:00
r-agimicrorna
Add top-level attributes for git R (Bioconductor) packages
2018-07-25 23:10:10 -07:00
r-aims
Add top-level attributes for git R (Bioconductor) packages
2018-07-25 23:10:10 -07:00
r-aldex2
Add top-level attributes for git R (Bioconductor) packages
2018-07-25 23:10:10 -07:00
r-allelicimbalance
Add top-level attributes for git R (Bioconductor) packages
2018-07-25 23:10:10 -07:00
r-alpine
Add top-level attributes for git R (Bioconductor) packages
2018-07-25 23:10:10 -07:00
r-als
…
r-alsace
Add top-level attributes for git R (Bioconductor) packages
2018-07-25 23:10:10 -07:00
r-altcdfenvs
Add top-level attributes for git R (Bioconductor) packages
2018-07-25 23:10:10 -07:00
r-amap
r-amap: new package (#8935)
2018-08-10 15:21:22 -05:00
r-ampliqueso
Add top-level attributes for git R (Bioconductor) packages
2018-07-25 23:10:10 -07:00
r-analysispageserver
Add top-level attributes for git R (Bioconductor) packages
2018-07-25 23:10:10 -07:00
r-anaquin
Add top-level attributes for git R (Bioconductor) packages
2018-07-25 23:10:10 -07:00
r-aneufinder
Add top-level attributes for git R (Bioconductor) packages
2018-07-25 23:10:10 -07:00
r-aneufinderdata
Add top-level attributes for git R (Bioconductor) packages
2018-07-25 23:10:10 -07:00
r-annaffy
Add top-level attributes for git R (Bioconductor) packages
2018-07-25 23:10:10 -07:00
r-annotate
r-annotate: new version (#9061)
2018-08-22 09:45:11 -05:00
r-annotationdbi
r-annotationdbi : new version (#9040)
2018-08-21 14:15:17 -05:00
r-annotationfilter
Add top-level attributes for git R (Bioconductor) packages
2018-07-25 23:10:10 -07:00
r-annotationforge
Add top-level attributes for git R (Bioconductor) packages
2018-07-25 23:10:10 -07:00
r-annotationhub
Add top-level attributes for git R (Bioconductor) packages
2018-07-25 23:10:10 -07:00
r-ape
…
r-argparse
r-argparse: new package (#8944)
2018-08-13 22:21:30 -05:00
r-assertthat
…
r-backports
…
r-bamsignals
Add top-level attributes for git R (Bioconductor) packages
2018-07-25 23:10:10 -07:00
r-base64
…
r-base64enc
…
r-bbmisc
…
r-beanplot
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r-bh
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r-biasedurn
r-biasedurn: new package (#8937)
2018-08-10 16:08:31 -05:00
r-bindr
…
r-bindrcpp
r-bindrcpp: add new version (#8950)
2018-08-11 09:21:05 -05:00
r-biobase
r-biobase: new version (#9038)
2018-08-21 14:15:42 -05:00
r-biocgenerics
r-biocgenerics: new version (#9039)
2018-08-21 14:15:30 -05:00
r-biocinstaller
Add top-level attributes for git R (Bioconductor) packages
2018-07-25 23:10:10 -07:00
r-biocparallel
r-biocparallel: new version (#9046)
2018-08-21 14:13:27 -05:00
r-biocstyle
Add top-level attributes for git R (Bioconductor) packages
2018-07-25 23:10:10 -07:00
r-biom-utils
…
r-biomart
r-biomart: new version; (#9058)
2018-09-03 21:03:47 -05:00
r-biomformat
Add top-level attributes for git R (Bioconductor) packages
2018-07-25 23:10:10 -07:00
r-biostrings
r-biostrings: new version (#9048)
2018-08-22 12:21:43 +02:00
r-biovizbase
Add top-level attributes for git R (Bioconductor) packages
2018-07-25 23:10:10 -07:00
r-bit
…
r-bit64
…
r-bitops
…
r-blob
…
r-bookdown
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r-boot
…
r-brew
…
r-broom
…
r-bsgenome
Add top-level attributes for git R (Bioconductor) packages
2018-07-25 23:10:10 -07:00
r-bumphunter
Add top-level attributes for git R (Bioconductor) packages
2018-07-25 23:10:10 -07:00
r-c50
…
r-callr
…
r-car
…
r-caret
…
r-category
Add top-level attributes for git R (Bioconductor) packages
2018-07-25 23:10:10 -07:00
r-catools
…
r-cdcfluview
…
r-cellranger
…
r-cghflasso
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r-checkmate
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r-checkpoint
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r-chemometrics
Tanim (#9158)
2018-09-07 16:00:52 -05:00
r-chron
…
r-circlize
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r-class
…
r-classint
…
r-cli
…
r-clipr
…
r-cluster
Further improvements to version parsing
2018-07-25 23:10:10 -07:00
r-clusterprofiler
Add top-level attributes for git R (Bioconductor) packages
2018-07-25 23:10:10 -07:00
r-cner
Add top-level attributes for git R (Bioconductor) packages
2018-07-25 23:10:10 -07:00
r-coda
…
r-codetools
…
r-coin
…
r-colorspace
…
r-complexheatmap
Add top-level attributes for git R (Bioconductor) packages
2018-07-25 23:10:10 -07:00
r-corpcor
…
r-corrplot
…
r-covr
…
r-cowplot
…
r-crayon
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r-crosstalk
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r-ctc
r-ctc: new package (#8936)
2018-08-12 19:46:14 -05:00
r-cubature
…
r-cubist
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r-curl
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r-data-table
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r-dbi
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r-dbplyr
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r-delayedarray
r-delayedarray: new version (#9053)
2018-08-22 09:39:52 -05:00
r-deldir
…
r-dendextend
…
r-deoptim
…
r-deoptimr
…
r-deseq
Add top-level attributes for git R (Bioconductor) packages
2018-07-25 23:10:10 -07:00
r-deseq2
r-deseq2: new version (#9062)
2018-09-03 21:03:08 -05:00
r-desolve
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r-devtools
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r-diagrammer
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r-dicekriging
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r-dichromat
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r-diffusionmap
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r-digest
…
r-diptest
…
r-dirichletmultinomial
Add top-level attributes for git R (Bioconductor) packages
2018-07-25 23:10:10 -07:00
r-dismo
…
r-dnacopy
Add top-level attributes for git R (Bioconductor) packages
2018-07-25 23:10:10 -07:00
r-do-db
…
r-domc
…
r-doparallel
…
r-dorng
…
r-dose
Add top-level attributes for git R (Bioconductor) packages
2018-07-25 23:10:10 -07:00
r-downloader
…
r-dplyr
…
r-dt
…
r-dtw
…
r-dygraphs
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r-e1071
…
r-edger
r-edger: new version (#8951)
2018-08-13 22:18:34 -05:00
r-ellipse
…
r-ensembldb
Add top-level attributes for git R (Bioconductor) packages
2018-07-25 23:10:10 -07:00
r-ergm
…
r-evaluate
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r-expm
…
r-factoextra
…
r-factominer
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r-fastcluster
r-fastcluster: new package (#8934)
2018-08-10 15:01:12 -05:00
r-fastmatch
…
r-ff
…
r-fftwtools
…
r-fgsea
Add top-level attributes for git R (Bioconductor) packages
2018-07-25 23:10:10 -07:00
r-filehash
…
r-findpython
r-findpython: new package (#8943)
2018-08-11 09:23:34 -05:00
r-fit-models
…
r-flashclust
…
r-flexclust
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r-flexmix
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r-fnn
Tanim (#9158)
2018-09-07 16:00:52 -05:00
r-forcats
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r-foreach
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r-forecast
…
r-foreign
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r-formatr
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r-formula
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r-fpc
…
r-fracdiff
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r-futile-logger
…
r-futile-options
…
r-gbm
…
r-gcrma
Add top-level attributes for git R (Bioconductor) packages
2018-07-25 23:10:10 -07:00
r-gdata
…
r-gdsfmt
Add top-level attributes for git R (Bioconductor) packages
2018-07-25 23:10:10 -07:00
r-geiger
…
r-genefilter
r-genefilter: new version (#9063)
2018-08-22 09:45:56 -05:00
r-genelendatabase
r-genelendatabase: new package (#8938)
2018-08-13 22:21:03 -05:00
r-geneplotter
r-geneplotter: new version (#9060)
2018-08-22 09:44:48 -05:00
r-genie3
Add top-level attributes for git R (Bioconductor) packages
2018-07-25 23:10:10 -07:00
r-genomeinfodb
r-genomeinfodb: new version (#9051)
2018-08-22 09:38:28 -05:00
r-genomeinfodbdata
r-genomeinfodbdata: new version (#9050)
2018-08-22 09:37:56 -05:00
r-genomicalignments
r-genomicalignments: new version (#9055)
2018-09-03 21:04:22 -05:00
r-genomicfeatures
r-genomicfeatures: new version (#9057)
2018-08-22 09:41:38 -05:00
r-genomicranges
r-genomicranges: new version (#9052)
2018-08-22 09:39:23 -05:00
r-geomorph
…
r-geoquery
Add top-level attributes for git R (Bioconductor) packages
2018-07-25 23:10:10 -07:00
r-geosphere
…
r-getopt
…
r-getoptlong
…
r-ggally
…
r-ggbio
Add top-level attributes for git R (Bioconductor) packages
2018-07-25 23:10:10 -07:00
r-ggdendro
…
r-ggjoy
…
r-ggmap
…
r-ggplot2
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r-ggpubr
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r-ggrepel
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r-ggridges
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r-ggsci
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r-ggvis
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r-gistr
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r-git2r
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r-glimma
r-glimma: new package (#8940)
2018-08-13 22:20:41 -05:00
r-glmnet
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r-globaloptions
…
r-glue
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r-gmodels
…
r-gmp
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r-go-db
…
r-googlevis
…
r-goplot
r-goplot: new package (#8942)
2018-08-11 09:26:16 -05:00
r-gosemsim
Add top-level attributes for git R (Bioconductor) packages
2018-07-25 23:10:10 -07:00
r-goseq
r-goseq: new package (#8939)
2018-08-26 19:45:23 -05:00
r-gostats
Add top-level attributes for git R (Bioconductor) packages
2018-07-25 23:10:10 -07:00
r-gplots
…
r-graph
Add top-level attributes for git R (Bioconductor) packages
2018-07-25 23:10:10 -07:00
r-gridbase
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r-gridextra
…
r-gseabase
Add top-level attributes for git R (Bioconductor) packages
2018-07-25 23:10:10 -07:00
r-gss
…
r-gsubfn
…
r-gtable
…
r-gtools
…
r-gtrellis
Add top-level attributes for git R (Bioconductor) packages
2018-07-25 23:10:10 -07:00
r-gviz
Add top-level attributes for git R (Bioconductor) packages
2018-07-25 23:10:10 -07:00
r-haven
…
r-hexbin
…
r-highr
…
r-hmisc
…
r-hms
…
r-htmltable
…
r-htmltools
…
r-htmlwidgets
…
r-httpuv
…
r-httr
…
r-hwriter
…
r-hypergraph
Add top-level attributes for git R (Bioconductor) packages
2018-07-25 23:10:10 -07:00
r-ica
…
r-igraph
…
r-illuminaio
Add top-level attributes for git R (Bioconductor) packages
2018-07-25 23:10:10 -07:00
r-impute
Add top-level attributes for git R (Bioconductor) packages
2018-07-25 23:10:10 -07:00
r-influencer
…
r-inline
…
r-interactivedisplaybase
Add top-level attributes for git R (Bioconductor) packages
2018-07-25 23:10:10 -07:00
r-ipred
…
r-iranges
r-iranges: new version (#9041)
2018-08-21 15:02:52 -05:00
r-irdisplay
…
r-irkernel
Add top-level attributes for git R (Bioconductor) packages
2018-07-25 23:10:10 -07:00
r-irlba
…
r-iso
…
r-iterators
…
r-janitor
…
r-jaspar2018
Add top-level attributes for git R (Bioconductor) packages
2018-07-25 23:10:10 -07:00
r-jomo
…
r-jpeg
…
r-jsonlite
…
r-kegg-db
…
r-kegggraph
Add top-level attributes for git R (Bioconductor) packages
2018-07-25 23:10:10 -07:00
r-keggrest
Add top-level attributes for git R (Bioconductor) packages
2018-07-25 23:10:10 -07:00
r-kernlab
…
r-kernsmooth
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r-kknn
…
r-knitr
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r-ks
Tanim (#9158)
2018-09-07 16:00:52 -05:00
r-labeling
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r-lambda-r
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r-laplacesdemon
…
r-lars
Tanim (#9158)
2018-09-07 16:00:52 -05:00
r-lattice
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r-latticeextra
…
r-lava
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r-lazyeval
…
r-leaflet
…
r-leaps
…
r-learnbayes
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r-lhs
…
r-limma
r-limma: new version (#8952)
2018-08-13 22:18:12 -05:00
r-lme4
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r-lmtest
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r-locfit
…
r-log4r
…
r-lpsolve
…
r-lsei
…
r-lubridate
…
r-magic
…
r-magrittr
…
r-makecdfenv
Add top-level attributes for git R (Bioconductor) packages
2018-07-25 23:10:10 -07:00
r-maldiquant
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r-mapproj
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r-maps
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r-maptools
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r-markdown
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r-mass
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r-matr
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r-matrix
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r-matrixmodels
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r-matrixstats
…
r-mclust
…
r-mcmcglmm
…
r-mco
…
r-mda
…
r-memoise
…
r-mergemaid
Add top-level attributes for git R (Bioconductor) packages
2018-07-25 23:10:10 -07:00
r-methodss3
…
r-mgcv
…
r-mgraster
…
r-mice
…
r-mime
…
r-minfi
Add top-level attributes for git R (Bioconductor) packages
2018-07-25 23:10:10 -07:00
r-minqa
…
r-misc3d
…
r-mitml
…
r-mixtools
…
r-mlbench
…
r-mlinterfaces
Add top-level attributes for git R (Bioconductor) packages
2018-07-25 23:10:10 -07:00
r-mlr
…
r-mlrmbo
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r-mmwrweek
…
r-mnormt
…
r-modelmetrics
…
r-modelr
…
r-modeltools
…
r-mpm
…
r-msnbase
Add top-level attributes for git R (Bioconductor) packages
2018-07-25 23:10:10 -07:00
r-multcomp
…
r-multicool
Tanim (#9158)
2018-09-07 16:00:52 -05:00
r-multtest
Add top-level attributes for git R (Bioconductor) packages
2018-07-25 23:10:10 -07:00
r-munsell
…
r-mvtnorm
…
r-mzid
Add top-level attributes for git R (Bioconductor) packages
2018-07-25 23:10:10 -07:00
r-mzr
Add top-level attributes for git R (Bioconductor) packages
2018-07-25 23:10:10 -07:00
r-nanotime
…
r-ncbit
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r-ncdf4
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r-network
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r-networkd3
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r-nlme
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r-nloptr
r-nloptr: Explicit depends_on(nlopt). Previously there was a hidden d… (#9176)
2018-09-14 08:11:16 -05:00
r-nmf
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r-nnet
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r-nnls
…
r-nor1mix
…
r-np
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r-numderiv
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r-oligoclasses
Add top-level attributes for git R (Bioconductor) packages
2018-07-25 23:10:10 -07:00
r-oo
…
r-openssl
…
r-org-hs-eg-db
…
r-organismdbi
Add top-level attributes for git R (Bioconductor) packages
2018-07-25 23:10:10 -07:00
r-packrat
…
r-pacman
…
r-pamr
…
r-pan
…
r-parallelmap
…
r-paramhelpers
…
r-party
…
r-partykit
…
r-pathview
Add top-level attributes for git R (Bioconductor) packages
2018-07-25 23:10:10 -07:00
r-pbapply
…
r-pbdzmq
…
r-pbkrtest
…
r-pcamethods
Add top-level attributes for git R (Bioconductor) packages
2018-07-25 23:10:10 -07:00
r-pcapp
Tanim (#9158)
2018-09-07 16:00:52 -05:00
r-permute
…
r-pfam-db
…
r-phangorn
…
r-phantompeakqualtools
…
r-phyloseq
Add top-level attributes for git R (Bioconductor) packages
2018-07-25 23:10:10 -07:00
r-picante
…
r-pkgconfig
…
r-pkgmaker
…
r-plogr
…
r-plot3d
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r-plotly
…
r-plotrix
…
r-pls
…
r-plyr
…
r-pmcmr
…
r-png
…
r-powerlaw
…
r-prabclus
…
r-praise
…
r-preprocesscore
Add top-level attributes for git R (Bioconductor) packages
2018-07-25 23:10:10 -07:00
r-prettyunits
…
r-proc
…
r-prodlim
…
r-progress
…
r-protgenerics
Add top-level attributes for git R (Bioconductor) packages
2018-07-25 23:10:10 -07:00
r-proto
…
r-proxy
…
r-pryr
…
r-psych
…
r-ptw
…
r-purrr
…
r-quadprog
…
r-quantmod
…
r-quantreg
…
r-quantro
Add top-level attributes for git R (Bioconductor) packages
2018-07-25 23:10:10 -07:00
r-qvalue
r-qvalue: new version (#9059)
2018-08-22 09:44:21 -05:00
r-r6
…
r-randomforest
…
r-ranger
…
r-rappdirs
…
r-raster
…
r-rbgl
Add top-level attributes for git R (Bioconductor) packages
2018-07-25 23:10:10 -07:00
r-rbokeh
…
r-rcolorbrewer
…
r-rcpp
…
r-rcpparmadillo
…
r-rcppblaze
…
r-rcppcctz
…
r-rcppcnpy
…
r-rcppeigen
…
r-rcppprogress
…
r-rcurl
…
r-rda
Further improvements to version parsing
2018-07-25 23:10:10 -07:00
r-readr
…
r-readxl
…
r-registry
…
r-rematch
…
r-reordercluster
…
r-reportingtools
Add top-level attributes for git R (Bioconductor) packages
2018-07-25 23:10:10 -07:00
r-repr
…
r-reprex
…
r-reshape
…
r-reshape2
…
r-rex
…
r-rgdal
…
r-rgenoud
…
r-rgeos
…
r-rgl
…
r-rgooglemaps
…
r-rgraphviz
Add top-level attributes for git R (Bioconductor) packages
2018-07-25 23:10:10 -07:00
r-rhdf5
Add top-level attributes for git R (Bioconductor) packages
2018-07-25 23:10:10 -07:00
r-rhtslib
Replace git=git with explicit branch names
2018-07-25 23:10:10 -07:00
r-rinside
…
r-rjags
…
r-rjava
…
r-rjson
…
r-rjsonio
…
r-rlang
…
r-rmarkdown
…
r-rminer
…
r-rmpfr
…
r-rmpi
…
r-rmysql
…
r-rngtools
…
r-robustbase
…
r-rocr
…
r-rodbc
…
r-rots
r-rots: new package (#8941)
2018-08-14 07:14:06 -05:00
r-roxygen2
…
r-rpart
…
r-rpart-plot
…
r-rpostgresql
…
r-rprojroot
…
r-rsamtools
r-rsamtools: new version (#9049)
2018-08-22 09:37:03 -05:00
r-rsnns
…
r-rsolnp
…
r-rsqlite
Further improvements to version parsing
2018-07-25 23:10:10 -07:00
r-rstan
…
r-rstudioapi
…
r-rtracklayer
r-rtracklayer: new version (#9056)
2018-08-22 09:43:25 -05:00
r-rtsne
…
r-rvcheck
…
r-rvest
…
r-rzmq
…
r-s4vectors
r-s4vectors: new version (#9043)
2018-08-21 14:14:05 -05:00
r-samr
…
r-sandwich
…
r-scales
…
r-scatterplot3d
…
r-sdmtools
…
r-segmented
…
r-selectr
…
r-seqinr
…
r-seqlogo
Add top-level attributes for git R (Bioconductor) packages
2018-07-25 23:10:10 -07:00
r-seurat
…
r-sf
…
r-sfsmisc
Further improvements to version parsing
2018-07-25 23:10:10 -07:00
r-shape
…
r-shiny
…
r-shinydashboard
…
r-shortread
Add top-level attributes for git R (Bioconductor) packages
2018-07-25 23:10:10 -07:00
r-siggenes
Add top-level attributes for git R (Bioconductor) packages
2018-07-25 23:10:10 -07:00
r-simpleaffy
Add top-level attributes for git R (Bioconductor) packages
2018-07-25 23:10:10 -07:00
r-sm
r-sm: new package (#8945)
2018-08-11 09:22:21 -05:00
r-smoof
…
r-sn
…
r-snow
…
r-snowfall
…
r-snprelate
Add top-level attributes for git R (Bioconductor) packages
2018-07-25 23:10:10 -07:00
r-som
Tanim (#9158)
2018-09-07 16:00:52 -05:00
r-somaticsignatures
Add top-level attributes for git R (Bioconductor) packages
2018-07-25 23:10:10 -07:00
r-sourcetools
…
r-sp
…
r-sparsem
…
r-spatial
Further improvements to version parsing
2018-07-25 23:10:10 -07:00
r-spdep
…
r-speedglm
…
r-spem
Add top-level attributes for git R (Bioconductor) packages
2018-07-25 23:10:10 -07:00
r-splitstackshape
…
r-sqldf
…
r-squash
…
r-stanheaders
…
r-statmod
…
r-statnet-common
…
r-stringi
…
r-stringr
…
r-strucchange
…
r-subplex
…
r-summarizedexperiment
r-summarizedexperiment: new version (#9054)
2018-09-04 14:34:45 -05:00
r-survey
…
r-survival
…
r-sva
Add top-level attributes for git R (Bioconductor) packages
2018-07-25 23:10:10 -07:00
r-tarifx
…
r-tclust
…
r-tensora
…
r-testit
…
r-testthat
…
r-tfbstools
Add top-level attributes for git R (Bioconductor) packages
2018-07-25 23:10:10 -07:00
r-tfmpvalue
…
r-th-data
…
r-threejs
…
r-tibble
…
r-tidycensus
…
r-tidyr
…
r-tidyselect
…
r-tidyverse
…
r-tiff
…
r-tigris
…
r-timedate
…
r-tmixclust
Add top-level attributes for git R (Bioconductor) packages
2018-07-25 23:10:10 -07:00
r-topgo
Add top-level attributes for git R (Bioconductor) packages
2018-07-25 23:10:10 -07:00
r-trimcluster
…
r-truncnorm
…
r-trust
…
r-tseries
…
r-tsne
…
r-ttr
…
r-udunits2
…
r-units
…
r-utf8
…
r-utils
…
r-uuid
…
r-variantannotation
Add top-level attributes for git R (Bioconductor) packages
2018-07-25 23:10:10 -07:00
r-varselrf
…
r-vcd
…
r-vegan
…
r-vgam
…
r-vipor
…
r-viridis
…
r-viridislite
…
r-visnetwork
…
r-vsn
Add top-level attributes for git R (Bioconductor) packages
2018-07-25 23:10:10 -07:00
r-whisker
…
r-withr
…
r-xde
Add top-level attributes for git R (Bioconductor) packages
2018-07-25 23:10:10 -07:00
r-xgboost
…
r-xlconnect
…
r-xlconnectjars
…
r-xlsx
…
r-xlsxjars
…
r-xmapbridge
Add top-level attributes for git R (Bioconductor) packages
2018-07-25 23:10:10 -07:00
r-xml
…
r-xml2
…
r-xtable
…
r-xts
…
r-xvector
r-xvector: new version (#9045)
2018-08-21 14:13:39 -05:00
r-yaml
…
r-yapsa
Add top-level attributes for git R (Bioconductor) packages
2018-07-25 23:10:10 -07:00
r-yaqcaffy
Add top-level attributes for git R (Bioconductor) packages
2018-07-25 23:10:10 -07:00
r-yarn
Add top-level attributes for git R (Bioconductor) packages
2018-07-25 23:10:10 -07:00
r-zlibbioc
r-zlibbioc: new version (#9044)
2018-08-21 14:13:52 -05:00
r-zoo
…
racon
…
raft
Replace git=git with explicit branch names
2018-07-25 23:10:10 -07:00
ragel
…
raja
Add top-level attributes for git R-Z packages
2018-07-25 23:10:10 -07:00
randfold
…
random123
…
randrproto
…
range-v3
range-v3 package (#9093)
2018-08-24 09:41:25 -05:00
rankstr
ECP VELOC Package update (#8910)
2018-08-08 21:40:38 -04:00
rapidjson
…
ravel
…
raxml
…
ray
…
rclone
new package: rclone (#9268)
2018-09-18 18:39:07 -07:00
rdma-core
Update rdma-core : new version and conflict with intel (#9255)
2018-09-15 19:42:45 -05:00
rdp-classifier
…
re2c
…
readfq
Add top-level attributes for git R-Z packages
2018-07-25 23:10:10 -07:00
readline
Download GNU packages from mirrors (#8992)
2018-08-15 23:27:21 -07:00
recordproto
…
redset
ECP VELOC Package update (#8910)
2018-08-08 21:40:38 -04:00
redundans
…
relion
added relion version 3 (beta) (#8872)
2018-08-16 10:51:58 -05:00
rempi
…
rename
…
rendercheck
…
renderproto
…
repeatmasker
install_tree, copy_tree can install into existing directory structures (#8289)
2018-08-15 09:30:09 -07:00
resourceproto
…
revbayes
…
rgb
…
rhash
…
rlwrap
…
rmats
rmats: new package starting at 4.0.2 (#9243)
2018-09-14 14:54:26 -07:00
rmlab
Add top-level attributes for git R-Z packages
2018-07-25 23:10:10 -07:00
rna-seqc
install_tree, copy_tree can install into existing directory structures (#8289)
2018-08-15 09:30:09 -07:00
rngstreams
…
rockstar
install_tree, copy_tree can install into existing directory structures (#8289)
2018-08-15 09:30:09 -07:00
root
…
rose
Add top-level attributes for git R-Z packages
2018-07-25 23:10:10 -07:00
ross
ROSS package: fix build error and add v7.0.0 (#9128)
2018-08-29 13:13:50 -04:00
rr
…
rsbench
…
rsem
…
rstart
…
rsync
…
rtags
…
rtax
…
ruby
…
ruby-gnuplot
…
ruby-narray
All git URLs end in .git
2018-07-25 23:10:10 -07:00
ruby-ronn
…
ruby-rubyinline
…
ruby-svn2git
…
ruby-terminal-table
…
rust
Add top-level attributes for git R-Z packages
2018-07-25 23:10:10 -07:00
rust-bindgen
…
sabre
Add top-level attributes for git R-Z packages
2018-07-25 23:10:10 -07:00
sailfish
Further improvements to version parsing
2018-07-25 23:10:10 -07:00
salmon
…
sambamba
Add top-level attributes for git R-Z packages
2018-07-25 23:10:10 -07:00
samblaster
…
samrai
…
samtools
Add samtools 1.9 (#8961)
2018-08-12 18:54:50 -05:00
sandbox
…
sas
…
satsuma2
Add top-level attributes for git R-Z packages
2018-07-25 23:10:10 -07:00
savanna
install_tree, copy_tree can install into existing directory structures (#8289)
2018-08-15 09:30:09 -07:00
saws
Add top-level attributes for git R-Z packages
2018-07-25 23:10:10 -07:00
sbt
install_tree, copy_tree can install into existing directory structures (#8289)
2018-08-15 09:30:09 -07:00
scala
…
scalasca
…
scalpel
…
scan-for-matches
…
scons
…
scorec-core
Add top-level attributes for git R-Z packages
2018-07-25 23:10:10 -07:00
scorep
scorep: make optional packages variants (#9011)
2018-08-18 11:25:05 -05:00
scotch
…
scr
install_tree, copy_tree can install into existing directory structures (#8289)
2018-08-15 09:30:09 -07:00
screen
Download GNU packages from mirrors (#8992)
2018-08-15 23:27:21 -07:00
scripts
…
scrnsaverproto
…
sctk
install_tree, copy_tree can install into existing directory structures (#8289)
2018-08-15 09:30:09 -07:00
sdl2
…
sdl2-image
…
sed
Download GNU packages from mirrors (#8992)
2018-08-15 23:27:21 -07:00
seqan
…
seqprep
…
seqtk
…
serf
…
sessreg
…
setxkbmap
…
sga
…
shapeit
…
shared-mime-info
…
shiny-server
…
shocklibs
…
shoremap
…
shortbred
…
shortstack
…
showfont
…
shuffile
ECP VELOC Package update (#8910)
2018-08-08 21:40:38 -04:00
sickle
…
siesta
…
signalp
…
signify
…
silo
Fix two dependencies with silo. (#9153)
2018-09-03 16:43:00 +02:00
simplemoc
simplemoc: version bump (#8884)
2018-08-03 14:31:06 -05:00
simul
…
simulationio
Add top-level attributes for git R-Z packages
2018-07-25 23:10:10 -07:00
singularity
singularity: new version
2018-08-31 08:47:24 -07:00
skilion-onedrive
Onedrive: a new package. (#9130)
2018-09-04 14:35:49 -05:00
sleef
…
slepc
slepc: add blopex variant (#8820)
2018-07-30 18:18:36 -05:00
slurm
…
smalt
…
smproxy
…
snakemake
…
snap
Add top-level attributes for git R-Z packages
2018-07-25 23:10:10 -07:00
snap-berkeley
…
snap-korf
…
snappy
msgpack-c, snappy: explicitly depend on googletest (#9167)
2018-09-03 20:25:17 -05:00
snbone
Add top-level attributes for git R-Z packages
2018-07-25 23:10:10 -07:00
sniffles
…
snpeff
install_tree, copy_tree can install into existing directory structures (#8289)
2018-08-15 09:30:09 -07:00
snphylo
install_tree, copy_tree can install into existing directory structures (#8289)
2018-08-15 09:30:09 -07:00
snptest
…
soap2
…
soapdenovo2
…
soapdenovo-trans
…
soapindel
…
soapsnp
…
sofa-c
…
somatic-sniper
…
sortmerna
Add top-level attributes for git R-Z packages
2018-07-25 23:10:10 -07:00
sosflow
Add top-level attributes for git R-Z packages
2018-07-25 23:10:10 -07:00
sowing
…
sox
…
spades
…
span-lite
Adds a package for span-lite header-only library (#9118)
2018-08-29 11:01:35 +02:00
spark
Java updates: new versions, classpath, and JAVA_HOME (#8613)
2018-08-28 14:35:13 -04:00
sparsehash
…
sparta
…
spdlog
…
spectrum-mpi
Further improvements to version parsing
2018-07-25 23:10:10 -07:00
speex
…
spglib
…
sph2pipe
…
spherepack
…
spindle
…
spot
…
sqlite
Build Python 3.7 with external libffi. (#9245)
2018-09-14 17:07:13 -07:00
sqlitebrowser
…
squid
…
sra-toolkit
…
sspace-longread
…
sspace-standard
…
sst-dumpi
Add top-level attributes for git R-Z packages
2018-07-25 23:10:10 -07:00
sst-macro
sst-macro package: add versions and variants (#9271)
2018-09-18 19:06:13 -07:00
stacks
…
staden-io-lib
…
star
star - added latest versions with shasum (#9257)
2018-09-16 15:44:33 -05:00
star-ccm-plus
…
startup-notification
…
stat
add fgfs variant to stat and develop version (#8919)
2018-08-09 10:56:08 -05:00
stc
…
steps
steps: new package starting at 3.3 (#9173)
2018-09-11 14:43:15 +02:00
stow
Download GNU packages from mirrors (#8992)
2018-08-15 23:27:21 -07:00
strace
…
stream
Add top-level attributes for git R-Z packages
2018-07-25 23:10:10 -07:00
strelka
…
stress
…
string-view-lite
Add string-view-lite package for header only library (#9125)
2018-08-29 06:54:20 +02:00
stringtie
…
structure
…
sublime-text
install_tree, copy_tree can install into existing directory structures (#8289)
2018-08-15 09:30:09 -07:00
subread
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subversion
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suite-sparse
suite-sparse: add version 5.3.0 (#8837)
2018-08-02 07:25:57 +02:00
sumaclust
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sundials
SUNDIALS: add new versions, update hashes, and apply clang fix (#9115)
2018-08-31 12:14:15 -07:00
superlu
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superlu-dist
superlu_dist should be built with 'HAVE_PARMETIS=TRUE'. (#8917)
2018-08-08 20:50:48 -04:00
superlu-mt
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supernova
install_tree, copy_tree can install into existing directory structures (#8289)
2018-08-15 09:30:09 -07:00
sw4lite
All git URLs end in .git
2018-07-25 23:10:10 -07:00
swap-assembler
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swarm
…
swfft
All git URLs end in .git
2018-07-25 23:10:10 -07:00
swiftsim
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swig
…
symengine
Replace git=git with explicit branch names
2018-07-25 23:10:10 -07:00
sympol
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sz
sz: fix checksum for 2.0.2.0 (#8868)
2018-08-02 11:43:59 -05:00
tabix
Add top-level attributes for git R-Z packages
2018-07-25 23:10:10 -07:00
talloc
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tantan
…
tar
Download GNU packages from mirrors (#8992)
2018-08-15 23:27:21 -07:00
targetp
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task
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taskd
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tasmanian
added Tasmanian versions 5.1 and development, enabled the Tasmanian options through +~ flags (#8804)
2018-07-27 10:10:32 -05:00
tassel
Add top-level attributes for git R-Z packages
2018-07-25 23:10:10 -07:00
tau
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tcl
…
tcl-itcl
…
tcl-tcllib
…
tcl-tclxml
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tclap
…
tcoffee
Add top-level attributes for git R-Z packages
2018-07-25 23:10:10 -07:00
tcptrace
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tcsh
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tealeaf
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templight
Templight package (#8782)
2018-07-26 11:19:14 -05:00
templight-tools
Templight package (#8782)
2018-07-26 11:19:14 -05:00
tetgen
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tethex
Replace git=git with explicit branch names
2018-07-25 23:10:10 -07:00
texinfo
Download GNU packages from mirrors (#8992)
2018-08-15 23:27:21 -07:00
texlive
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the-platinum-searcher
install_tree, copy_tree can install into existing directory structures (#8289)
2018-08-15 09:30:09 -07:00
the-silver-searcher
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thrift
Java updates: new versions, classpath, and JAVA_HOME (#8613)
2018-08-28 14:35:13 -04:00
thrust
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tig
…
tinyxml
install_tree, copy_tree can install into existing directory structures (#8289)
2018-08-15 09:30:09 -07:00
tinyxml2
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tioga
Add top-level attributes for git R-Z packages
2018-07-25 23:10:10 -07:00
tk
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tmalign
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tmhmm
…
tmux
…
tmuxinator
Add top-level attributes for git R-Z packages
2018-07-25 23:10:10 -07:00
tophat
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tppred
…
transabyss
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transdecoder
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transposome
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transset
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trapproto
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tree
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trf
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triangle
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trilinos
trilinos: disable xlf_tpetra.patch for trilinos@develop (#9193)
2018-09-08 23:51:16 -05:00
trimgalore
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trimmomatic
install_tree, copy_tree can install into existing directory structures (#8289)
2018-08-15 09:30:09 -07:00
trinity
trinity: full dependencies (#9064)
2018-09-04 14:35:06 -05:00
trnascan-se
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turbine
…
turbomole
…
tut
…
twm
…
tycho2
Add top-level attributes for git R-Z packages
2018-07-25 23:10:10 -07:00
typhon
Unit test fixes
2018-07-25 23:10:10 -07:00
typhonio
Add top-level attributes for git R-Z packages
2018-07-25 23:10:10 -07:00
uberftp
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ucx
…
udunits2
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ufo-core
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ufo-filters
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umpire
Add top-level attributes for git R-Z packages
2018-07-25 23:10:10 -07:00
unblur
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uncrustify
…
unibilium
…
unison
…
units
Download GNU packages from mirrors (#8992)
2018-08-15 23:27:21 -07:00
unixodbc
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unuran
…
unzip
…
usearch
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util-linux
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util-macros
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uuid
…
valgrind
Replace git=git with explicit branch names
2018-07-25 23:10:10 -07:00
vampirtrace
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vardictjava
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varscan
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vc
…
vcftools
…
vcsh
…
vdt
…
vecgeom
…
veclibfort
Replace git=git with explicit branch names
2018-07-25 23:10:10 -07:00
vegas2
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veloc
ECP VELOC Package update (#8910)
2018-08-08 21:40:38 -04:00
velvet
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verilator
…
verrou
Add top-level attributes for git R-Z packages
2018-07-25 23:10:10 -07:00
videoproto
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viennarna
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viewres
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vim
Vim: add version 8.1.0338 (#9155)
2018-09-01 08:12:14 -05:00
virtualgl
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visit
…
vizglow
…
vmatch
…
voropp
…
votca-csg
Add top-level attributes for git R-Z packages
2018-07-25 23:10:10 -07:00
votca-ctp
Add top-level attributes for git R-Z packages
2018-07-25 23:10:10 -07:00
votca-tools
Add top-level attributes for git R-Z packages
2018-07-25 23:10:10 -07:00
votca-xtp
Further improvements to version parsing
2018-07-25 23:10:10 -07:00
vpfft
Add top-level attributes for git R-Z packages
2018-07-25 23:10:10 -07:00
vpic
Add top-level attributes for git R-Z packages
2018-07-25 23:10:10 -07:00
vsearch
…
vt
…
vtk
Specify Python executable in VTK package (#9000)
2018-08-17 14:51:49 -05:00
vtkh
Add top-level attributes for git R-Z packages
2018-07-25 23:10:10 -07:00
vtkm
Add top-level attributes for git R-Z packages
2018-07-25 23:10:10 -07:00
wannier90
install_tree, copy_tree can install into existing directory structures (#8289)
2018-08-15 09:30:09 -07:00
wcslib
…
wget
Download GNU packages from mirrors (#8992)
2018-08-15 23:27:21 -07:00
wgsim
Add top-level attributes for git R-Z packages
2018-07-25 23:10:10 -07:00
windowswmproto
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wireshark
Replace pkg-config dependencies with virtual (#8783)
2018-08-02 13:29:04 -04:00
workrave
install_tree, copy_tree can install into existing directory structures (#8289)
2018-08-15 09:30:09 -07:00
wt
Add top-level attributes for git R-Z packages
2018-07-25 23:10:10 -07:00
wx
Add top-level attributes for git R-Z packages
2018-07-25 23:10:10 -07:00
wxpropgrid
…
x11perf
…
xapian-core
…
xauth
…
xbacklight
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xbiff
…
xbitmaps
…
xbraid
…
xcalc
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xcb-demo
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xcb-proto
…
xcb-util
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xcb-util-cursor
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xcb-util-errors
…
xcb-util-image
…
xcb-util-keysyms
…
xcb-util-renderutil
…
xcb-util-wm
…
xcb-util-xrm
Add top-level attributes for git R-Z packages
2018-07-25 23:10:10 -07:00
xclip
Add top-level attributes for git R-Z packages
2018-07-25 23:10:10 -07:00
xclipboard
…
xclock
…
xcmiscproto
…
xcmsdb
…
xcompmgr
…
xconsole
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xcursor-themes
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xcursorgen
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xdbedizzy
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xditview
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xdm
…
xdpyinfo
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xdriinfo
…
xedit
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xerces-c
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xev
…
xextproto
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xeyes
…
xf86bigfontproto
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xf86dga
…
xf86dgaproto
…
xf86driproto
…
xf86miscproto
…
xf86rushproto
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xf86vidmodeproto
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xfd
…
xfindproxy
…
xfontsel
…
xfs
…
xfsinfo
…
xfwp
…
xgamma
…
xgc
…
xhmm
Add top-level attributes for git R-Z packages
2018-07-25 23:10:10 -07:00
xhost
…
xineramaproto
…
xinit
…
xinput
…
xios
…
xkbcomp
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xkbdata
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xkbevd
…
xkbprint
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xkbutils
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xkeyboard-config
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xkill
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xload
…
xlogo
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xlsatoms
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xlsclients
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xlsfonts
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xmag
…
xman
…
xmessage
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xmh
…
xmlf90
…
xmlto
…
xmodmap
…
xmore
…
xorg-cf-files
…
xorg-docs
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xorg-gtest
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xorg-server
…
xorg-sgml-doctools
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xphelloworld
…
xplor-nih
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xplsprinters
…
xpr
…
xprehashprinterlist
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xprop
…
xproto
…
xproxymanagementprotocol
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xqilla
…
xrandr
…
xrdb
…
xrefresh
…
xrootd
…
xrx
…
xsbench
xsbench: added v18 (#9269)
2018-09-18 14:07:37 -06:00
xscope
…
xsd
new package: XSD (#8784)
2018-08-02 16:28:19 -04:00
xsdk
xsdk: disable assimp in deal.II (#9190)
2018-09-08 16:07:37 -05:00
xsdktrilinos
Add top-level attributes for git R-Z packages
2018-07-25 23:10:10 -07:00
xset
…
xsetmode
…
xsetpointer
…
xsetroot
…
xsimd
Add top-level attributes for git R-Z packages
2018-07-25 23:10:10 -07:00
xsm
…
xstdcmap
…
xtensor
Add top-level attributes for git R-Z packages
2018-07-25 23:10:10 -07:00
xtensor-python
Add top-level attributes for git R-Z packages
2018-07-25 23:10:10 -07:00
xterm
…
xtl
Add top-level attributes for git R-Z packages
2018-07-25 23:10:10 -07:00
xtrans
…
xtrap
…
xts
…
xvidtune
…
xvinfo
…
xwd
…
xwininfo
…
xwud
…
xxhash
…
xz
…
yajl
Add top-level attributes for git R-Z packages
2018-07-25 23:10:10 -07:00
yambo
Further improvements to version parsing
2018-07-25 23:10:10 -07:00
yaml-cpp
Add top-level attributes for git R-Z packages
2018-07-25 23:10:10 -07:00
yasm
Replace git=git with explicit branch names
2018-07-25 23:10:10 -07:00
yorick
install_tree, copy_tree can install into existing directory structures (#8289)
2018-08-15 09:30:09 -07:00
z3
…
zeromq
Add top-level attributes for git R-Z packages
2018-07-25 23:10:10 -07:00
zfp
…
zip
…
zlib
…
zoltan
zoltan: fix building with Intel compilers (#8985)
2018-08-15 10:40:58 -05:00
zsh
…
zstd
…