eea786f4e8
- remove the old LGPL license headers from all files in Spack - add SPDX headers to all files - core and most packages are (Apache-2.0 OR MIT) - a very small number of remaining packages are LGPL-2.1-only
26 lines
887 B
Python
26 lines
887 B
Python
# Copyright 2013-2018 Lawrence Livermore National Security, LLC and other
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# Spack Project Developers. See the top-level COPYRIGHT file for details.
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#
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# SPDX-License-Identifier: (Apache-2.0 OR MIT)
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from spack import *
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class Hapcut2(MakefilePackage):
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"""HapCUT2 is a maximum-likelihood-based tool for assembling haplotypes
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from DNA sequence reads, designed to 'just work' with excellent speed
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and accuracy."""
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homepage = "https://github.com/vibansal/HapCUT2"
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git = "https://github.com/vibansal/HapCUT2.git"
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version('2017-07-10', commit='2966b94c2c2f97813b757d4999b7a6471df1160e',
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submodules=True)
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def install(self, spec, prefix):
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mkdirp(prefix.bin)
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with working_dir('build'):
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install('extractFOSMID', prefix.bin)
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install('extractHAIRS', prefix.bin)
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install('HAPCUT2', prefix.bin)
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