1a11449c86
* New package - REDItools This PR adds the REDItools package, along with a new package dependency, py-fisher. This contains a patch generated from the python 2to3 script as well as some other fixes. I am not sure if the project is ready to support python-3 yet but I submitted the other patches upstream. * Update var/spack/repos/builtin/packages/reditools/package.py Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com> Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
12 lines
422 B
Diff
12 lines
422 B
Diff
--- a/main/REDItoolDenovo.py 2020-07-16 17:35:46.008030346 -0500
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+++ b/main/REDItoolDenovo.py 2020-07-16 17:38:39.700035490 -0500
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@@ -768,7 +768,7 @@
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for j in ridxinfo.split('\n'): #MOD
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l=(j.strip()).split('\t')
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if l[0] in ['*', '']: continue #MOD
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- if int(l[2])+int(l[3]) > 0: rrefs[l[0]]=int(l[1])
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+ if int(l[2])+int(l[3]) > 0: rrefs[l[0]]=int(l[1])
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frefs=[]
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fidxinfo=open(fastafile+'.fai')
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for j in fidxinfo:
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