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Elsa Gonsiorowski, PhD 1cd33e7052 ECP VELOC Package update (#8910) 
* update of veloc & dep versions (replace old non-working versions)

* veloc doesn't work with gcc <= 4.9.3

* explicitly pass MPI to CMake for veloc build
2018-08-08 21:40:38 -04:00
..
abinit
abinit: added version 8.8.2 (#8294)
2018-05-28 08:11:43 -05:00
abyss
Fix digest for abyss@1.5.2 (#8341)
2018-06-01 15:06:45 -05:00
accfft
Add top-level attributes for hg, svn, and git A-L packages
2018-07-25 23:10:10 -07:00
ack
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activeharmony
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adept-utils
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adios
Add top-level attributes for hg, svn, and git A-L packages
2018-07-25 23:10:10 -07:00
adios2
adios2: add 2.2.0 (#8871)
2018-08-02 11:16:17 -05:00
adlbx
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adol-c
Add top-level attributes for hg, svn, and git A-L packages
2018-07-25 23:10:10 -07:00
aegean
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albany
Add top-level attributes for hg, svn, and git A-L packages
2018-07-25 23:10:10 -07:00
albert
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alglib
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allinea-forge
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allinea-reports
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allpaths-lg
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alquimia
Add top-level attributes for hg, svn, and git A-L packages
2018-07-25 23:10:10 -07:00
alsa-lib
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amg
Update broken codesign.llnl.gov urls (#8880)
2018-08-03 10:25:10 -05:00
amg2013
Update broken codesign.llnl.gov urls (#8880)
2018-08-03 10:25:10 -05:00
amp
Add top-level attributes for hg, svn, and git A-L packages
2018-07-25 23:10:10 -07:00
ampliconnoise
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amrex
AMReX: update package.py (#8697)
2018-07-26 13:29:03 -05:00
amrvis
Add top-level attributes for hg, svn, and git A-L packages
2018-07-25 23:10:10 -07:00
andi
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angsd
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ant
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antlr
antlr: Turn off CSharp (#8157)
2018-05-18 10:39:30 -07:00
ants
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ape
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apex
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apple-libunwind
apple-libunwind: new package, provides unwind
2018-08-06 22:01:50 -07:00
applewmproto
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appres
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apr
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apr-util
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aragorn
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archer
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argp-standalone
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argtable
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arlecore
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armadillo
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arpack-ng
arpack: add version 3.6.2 (#8881)
2018-08-03 09:53:44 -05:00
arrow
Parquet: new packages (#8601)
2018-07-04 07:24:38 -05:00
ascent
Add top-level attributes for hg, svn, and git A-L packages
2018-07-25 23:10:10 -07:00
asciidoc
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aspa
Add top-level attributes for hg, svn, and git A-L packages
2018-07-25 23:10:10 -07:00
aspcud
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aspect
Add top-level attributes for hg, svn, and git A-L packages
2018-07-25 23:10:10 -07:00
aspell
views: packages can customize how they're added to views (#7152)
2018-06-26 16:14:05 -07:00
aspell6-de
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aspell6-en
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aspell6-es
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aspera-cli
aspera-cli: a new package. (#8715)
2018-07-16 13:53:23 -05:00
assimp
Further improvements to version parsing
2018-07-25 23:10:10 -07:00
astra
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astral
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astyle
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atk
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atlas
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atom-dft
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atompaw
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atop
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augustus
Augustus updated to version 3.3.1 (#8588)
2018-07-22 17:11:37 -05:00
autoconf
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autodock-vina
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autogen
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automaded
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automake
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axel
A new package: axel. (#8434)
2018-06-10 15:16:16 -05:00
axl
ECP VELOC Package update (#8910)
2018-08-08 21:40:38 -04:00
bamtools
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bamutil
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barrnap
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bash
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bash-completion
Replace git=git with explicit branch names
2018-07-25 23:10:10 -07:00
bats
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bazel
Add latest versions of bazel (#8250)
2018-05-23 07:27:45 -05:00
bbcp
Add top-level attributes for hg, svn, and git A-L packages
2018-07-25 23:10:10 -07:00
bbmap
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bc
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bcftools
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bcl2fastq2
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bdftopcf
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bdw-gc
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bear
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beast1
beast1: add libbeagle support (#8525)
2018-07-22 17:17:03 -05:00
beast2
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bedops
Add info for bedops@v2.4.35 (#8310)
2018-05-29 14:46:42 -05:00
bedtools2
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beforelight
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benchmark
Add top-level attributes for hg, svn, and git A-L packages
2018-07-25 23:10:10 -07:00
berkeley-db
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bertini
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bib2xhtml
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bigreqsproto
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binutils
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bioawk
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biopieces
Add top-level attributes for hg, svn, and git A-L packages
2018-07-25 23:10:10 -07:00
bismark
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bison
style: make core comply with pep8-naming
2018-07-19 00:41:36 -07:00
bitmap
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blasr
blasr: new package (#8367)
2018-07-07 10:05:57 -05:00
blasr-libcpp
blasr-libcpp: new package (#8366)
2018-06-13 08:55:31 -05:00
blast-plus
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blat
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blaze
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bliss
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blitz
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bmake
Add bmake 20180512 (#8221)
2018-05-21 15:58:11 -05:00
bml
Add top-level attributes for hg, svn, and git A-L packages
2018-07-25 23:10:10 -07:00
bohrium
Further improvements to version parsing
2018-07-25 23:10:10 -07:00
bookleaf-cpp
Add top-level attributes for hg, svn, and git A-L packages
2018-07-25 23:10:10 -07:00
boost
Add top-level attributes for hg, svn, and git A-L packages
2018-07-25 23:10:10 -07:00
boostmplcartesianproduct
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bowtie
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bowtie2
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boxlib
Correcting position independent code setting for boxlib and amrex. (#8537)
2018-06-21 16:37:10 -05:00
bpp-core
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bpp-phyl
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bpp-seq
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bpp-suite
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bracken
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braker
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branson
All git URLs end in .git
2018-07-25 23:10:10 -07:00
breakdancer
Add top-level attributes for hg, svn, and git A-L packages
2018-07-25 23:10:10 -07:00
breseq
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brigand
Add top-level attributes for hg, svn, and git A-L packages
2018-07-25 23:10:10 -07:00
bsseeker2
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bucky
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bumpversion
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busco
Add top-level attributes for hg, svn, and git A-L packages
2018-07-25 23:10:10 -07:00
butter
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bwa
Remove unnecessary version-specific URL overrides (#8693)
2018-07-12 07:28:11 +02:00
bwtool
New packages: libbeato bwtool. (#8681)
2018-07-11 10:33:44 -05:00
byobu
byobu: update package (#8628)
2018-07-02 15:17:39 -05:00
bzip2
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c-blosc
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c-lime
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caffe
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cairo
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cairomm
new packages: workrave and its dependencies (#7753)
2018-06-21 18:25:26 -07:00
caliper
caliper: update to use unwind virtual package
2018-08-06 22:01:50 -07:00
callpath
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camellia
Add top-level attributes for hg, svn, and git A-L packages
2018-07-25 23:10:10 -07:00
candle-benchmarks
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cantera
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canu
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cap3
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cares
Add top-level attributes for hg, svn, and git A-L packages
2018-07-25 23:10:10 -07:00
cask
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casper
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catalyst
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catch
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cbench
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cblas
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cbtf
Add top-level attributes for hg, svn, and git A-L packages
2018-07-25 23:10:10 -07:00
cbtf-argonavis
libmonitor: update version and add variant to configure (#8834)
2018-08-03 14:00:12 -04:00
cbtf-argonavis-gui
Add top-level attributes for hg, svn, and git A-L packages
2018-07-25 23:10:10 -07:00
cbtf-krell
libmonitor: update version and add variant to configure (#8834)
2018-08-03 14:00:12 -04:00
cbtf-lanl
Add top-level attributes for hg, svn, and git A-L packages
2018-07-25 23:10:10 -07:00
ccache
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cctools
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cdbfasta
Add top-level attributes for hg, svn, and git A-L packages
2018-07-25 23:10:10 -07:00
cdd
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cddlib
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cdhit
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cdo
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ceed
Balay/petsc remove boost dependency (#8508)
2018-06-24 10:52:14 -05:00
cereal
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ceres-solver
votca*: update dependencies (#8757)
2018-07-19 11:06:16 -05:00
cfitsio
Add CFITSIO 3.450 (#8602)
2018-06-28 11:28:22 -05:00
cgal
cgal: added version 4.12 (#8252)
2018-05-23 10:11:03 -05:00
cgm
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cgns
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charliecloud
add Charliecloud 0.9.1 (#8902)
2018-08-06 17:43:00 -05:00
charm
Replace git=git with explicit branch names
2018-07-25 23:10:10 -07:00
check
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chlorop
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chombo
Add top-level attributes for hg, svn, and git A-L packages
2018-07-25 23:10:10 -07:00
cistem
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cityhash
Add top-level attributes for hg, svn, and git A-L packages
2018-07-25 23:10:10 -07:00
clamr
Add top-level attributes for hg, svn, and git A-L packages
2018-07-25 23:10:10 -07:00
clapack
New package: clapack (#7992)
2018-06-04 13:19:27 -05:00
cleaveland4
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cleverleaf
Add top-level attributes for hg, svn, and git A-L packages
2018-07-25 23:10:10 -07:00
clfft
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clhep
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clingo
compiler flags: add cxx98 standard support (#7601)
2018-06-08 13:49:31 -07:00
cloc
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cloog
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cloverleaf
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cloverleaf3d
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clustalo
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clustalw
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cmake
CMake: patch for NAG. (#8869)
2018-08-02 11:17:15 -05:00
cmocka
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cmor
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cnmem
Add top-level attributes for hg, svn, and git A-L packages
2018-07-25 23:10:10 -07:00
cnpy
Add top-level attributes for hg, svn, and git A-L packages
2018-07-25 23:10:10 -07:00
cntk
Add top-level attributes for hg, svn, and git A-L packages
2018-07-25 23:10:10 -07:00
cntk1bitsgd
Add top-level attributes for hg, svn, and git A-L packages
2018-07-25 23:10:10 -07:00
codar-cheetah
Add top-level attributes for hg, svn, and git A-L packages
2018-07-25 23:10:10 -07:00
coevp
Add top-level attributes for hg, svn, and git A-L packages
2018-07-25 23:10:10 -07:00
cohmm
Add top-level attributes for hg, svn, and git A-L packages
2018-07-25 23:10:10 -07:00
coinhsl
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colm
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colordiff
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comd
Add top-level attributes for hg, svn, and git A-L packages
2018-07-25 23:10:10 -07:00
compiz
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compositeproto
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conduit
Add top-level attributes for hg, svn, and git A-L packages
2018-07-25 23:10:10 -07:00
constype
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converge
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coreutils
coreutils: add version 8.29
2018-06-24 16:39:04 -07:00
corset
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cosmomc
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cosp2
Add top-level attributes for hg, svn, and git A-L packages
2018-07-25 23:10:10 -07:00
cp2k
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cppad
Replace git=git with explicit branch names
2018-07-25 23:10:10 -07:00
cppcheck
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cpprestsdk
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cppunit
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cppzmq
Add top-level attributes for hg, svn, and git A-L packages
2018-07-25 23:10:10 -07:00
cpu-features
Add top-level attributes for hg, svn, and git A-L packages
2018-07-25 23:10:10 -07:00
cpuinfo
Add top-level attributes for hg, svn, and git A-L packages
2018-07-25 23:10:10 -07:00
cram
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cryptopp
Add cryptopp 7.0.0 (#8224)
2018-05-21 11:52:25 -05:00
cscope
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csdp
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ctffind
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cub
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cube
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cuda
CUDA 9.2 (#8238)
2018-05-22 12:45:47 +02:00
cuda-memtest
Add top-level attributes for hg, svn, and git A-L packages
2018-07-25 23:10:10 -07:00
cudnn
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cufflinks
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cups
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curl
Add cURL 7.60.0 (#8210)
2018-05-20 15:04:28 -05:00
cvs
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czmq
flux: update flux-core package and add a flux-sched package (#8818)
2018-08-02 16:20:55 -04:00
dakota
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daligner
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damageproto
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damselfly
tests: add checks and tests for consistent version() arguments
2018-07-25 23:10:10 -07:00
darshan-runtime
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darshan-util
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dash
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datamash
Add info for datamash@1.3 (#8261)
2018-05-23 18:40:14 -05:00
dataspaces
Add top-level attributes for hg, svn, and git A-L packages
2018-07-25 23:10:10 -07:00
davix
Add new package: davix (#8376)
2018-06-06 18:54:07 -05:00
dbus
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dealii
Add top-level attributes for hg, svn, and git A-L packages
2018-07-25 23:10:10 -07:00
dealii-parameter-gui
Add top-level attributes for hg, svn, and git A-L packages
2018-07-25 23:10:10 -07:00
deconseq-standalone
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dejagnu
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delly2
Add top-level attributes for hg, svn, and git A-L packages
2018-07-25 23:10:10 -07:00
denovogear
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dia
Dia needs access to gettext and pkg-config. (#8840)
2018-08-01 19:12:17 -05:00
dialign-tx
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diamond
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diffsplice
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direnv
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discovar
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discovardenovo
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dislin
style: bring packages in compliance with pep8-naming
2018-07-19 00:41:36 -07:00
dlpack
Add top-level attributes for hg, svn, and git A-L packages
2018-07-25 23:10:10 -07:00
dmd
dmd: a new package. (#8826)
2018-08-02 22:07:01 -05:00
dmlc-core
Add top-level attributes for hg, svn, and git A-L packages
2018-07-25 23:10:10 -07:00
dmtcp
Add package DMTCP (#8808)
2018-07-26 09:47:55 -05:00
dmxproto
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docbook-xml
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docbook-xsl
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dos2unix
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double-conversion
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doxygen
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dri2proto
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dri3proto
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dsdp
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dsrc
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dtcmp
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dyninst
Add top-level attributes for hg, svn, and git A-L packages
2018-07-25 23:10:10 -07:00
ea-utils
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easybuild
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ebms
Add top-level attributes for hg, svn, and git A-L packages
2018-07-25 23:10:10 -07:00
eccodes
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eclipse-gcj-parser
new package: pdftk (#8166)
2018-06-12 11:25:20 -07:00
ecp-proxy-apps
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ed
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editres
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eigen
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elasticsearch
Added elastic search (#8424)
2018-06-07 23:17:07 -05:00
elemental
Add top-level attributes for hg, svn, and git A-L packages
2018-07-25 23:10:10 -07:00
elfutils
elfutils: update version and add variants (#8891)
2018-08-07 14:04:05 -05:00
elk
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elpa
elpa: add 2018.05.001.rc1 and 2017.11.001 (#8512)
2018-06-22 07:52:40 -05:00
emacs
Update package: add info for emacs@26.1 (#8302)
2018-05-30 10:36:20 -05:00
emboss
Skip update check. (#8683)
2018-07-27 09:57:05 -05:00
encodings
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environment-modules
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eospac
clean up version names (#8368)
2018-06-04 15:04:12 -05:00
er
ECP VELOC Package update (#8910)
2018-08-08 21:40:38 -04:00
es
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esmf
add commented test dependencies (#8407)
2018-06-07 10:33:59 -05:00
essl
Unit test fixes
2018-07-25 23:10:10 -07:00
ethminer
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etsf-io
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everytrace
Add top-level attributes for hg, svn, and git A-L packages
2018-07-25 23:10:10 -07:00
everytrace-example
Add top-level attributes for hg, svn, and git A-L packages
2018-07-25 23:10:10 -07:00
evieext
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exabayes
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examinimd
Add top-level attributes for hg, svn, and git A-L packages
2018-07-25 23:10:10 -07:00
exampm
Add top-level attributes for hg, svn, and git A-L packages
2018-07-25 23:10:10 -07:00
exasp2
Add top-level attributes for hg, svn, and git A-L packages
2018-07-25 23:10:10 -07:00
exmcutils
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exodusii
Add top-level attributes for hg, svn, and git A-L packages
2018-07-25 23:10:10 -07:00
exonerate
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expat
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expect
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express
Add top-level attributes for hg, svn, and git A-L packages
2018-07-25 23:10:10 -07:00
extrae
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exuberant-ctags
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f90cache
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fabtests
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falcon
Add top-level attributes for hg, svn, and git A-L packages
2018-07-25 23:10:10 -07:00
farmhash
Add top-level attributes for hg, svn, and git A-L packages
2018-07-25 23:10:10 -07:00
fast-gbs
Add top-level attributes for hg, svn, and git A-L packages
2018-07-25 23:10:10 -07:00
fastjar
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fastmath
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fastme
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fastphase
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fastq-screen
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fastqc
fastqc: Add version 0.11.7 (#8319)
2018-05-30 12:30:50 -05:00
fastqvalidator
Add top-level attributes for hg, svn, and git A-L packages
2018-07-25 23:10:10 -07:00
fasttree
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fastx-toolkit
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fenics
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fermi
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fermikit
Add top-level attributes for hg, svn, and git A-L packages
2018-07-25 23:10:10 -07:00
fermisciencetools
Fermi Science Tools: New package (#8126)
2018-06-07 14:07:39 -05:00
ferret
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ffmpeg
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fftw
fftw: version bump (#8723)
2018-07-17 11:11:19 -05:00
fimpute
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findutils
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fio
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fish
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fixesproto
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flac
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flang
Package/flang: Updated to use own version of llvm (#8766)
2018-08-03 20:35:09 -04:00
flann
add commented test dependencies (#8407)
2018-06-07 10:33:59 -05:00
flash
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flatbuffers
Parquet: new packages (#8601)
2018-07-04 07:24:38 -05:00
flecsale
Add top-level attributes for hg, svn, and git A-L packages
2018-07-25 23:10:10 -07:00
flecsi
Add top-level attributes for hg, svn, and git A-L packages
2018-07-25 23:10:10 -07:00
flex
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flint
Replace git=git with explicit branch names
2018-07-25 23:10:10 -07:00
flit
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fltk
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flux-core
flux: update flux-core package and add a flux-sched package (#8818)
2018-08-02 16:20:55 -04:00
flux-sched
flux: update flux-core package and add a flux-sched package (#8818)
2018-08-02 16:20:55 -04:00
fluxbox
Replace pkg-config dependencies with virtual (#8783)
2018-08-02 13:29:04 -04:00
fmt
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foam-extend
All git URLs end in .git
2018-07-25 23:10:10 -07:00
folly
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font-adobe-75dpi
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font-adobe-100dpi
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font-adobe-utopia-75dpi
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font-adobe-utopia-100dpi
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font-adobe-utopia-type1
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font-alias
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font-arabic-misc
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font-bh-75dpi
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font-bh-100dpi
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font-bh-lucidatypewriter-75dpi
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font-bh-lucidatypewriter-100dpi
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font-bh-ttf
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font-bh-type1
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font-bitstream-75dpi
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font-bitstream-100dpi
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font-bitstream-speedo
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font-bitstream-type1
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font-cronyx-cyrillic
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font-cursor-misc
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font-daewoo-misc
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font-dec-misc
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font-ibm-type1
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font-isas-misc
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font-jis-misc
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font-micro-misc
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font-misc-cyrillic
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font-misc-ethiopic
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font-misc-meltho
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font-misc-misc
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font-mutt-misc
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font-schumacher-misc
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font-screen-cyrillic
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font-sony-misc
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font-sun-misc
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font-util
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font-winitzki-cyrillic
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font-xfree86-type1
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fontcacheproto
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fontconfig
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fontsproto
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fonttosfnt
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fp16
Add top-level attributes for hg, svn, and git A-L packages
2018-07-25 23:10:10 -07:00
fpc
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fr-hit
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freebayes
Add top-level attributes for hg, svn, and git A-L packages
2018-07-25 23:10:10 -07:00
freeglut
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freetype
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fseq
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fsl
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fslsfonts
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fstobdf
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ftgl
FTGL package workarounds (#8812)
2018-07-26 15:54:46 -05:00
funhpc
Add top-level attributes for hg, svn, and git A-L packages
2018-07-25 23:10:10 -07:00
fyba
Fix compilation of FYBA with GCC 6 (#8273)
2018-05-26 10:36:34 -05:00
gapbs
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gapcloser
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gapfiller
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gasnet
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gatk
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gaussian
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gawk
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gblocks
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gcc
gcc: Add 8.2.0 (#8813)
2018-07-27 08:14:49 -05:00
gccmakedep
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gccxml
Add top-level attributes for hg, svn, and git A-L packages
2018-07-25 23:10:10 -07:00
gconf
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gcta
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gdal
Replace pkg-config dependencies with virtual (#8783)
2018-08-02 13:29:04 -04:00
gdb
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gdbm
gdbm: Get working on CentOS5 and Other Older Systems (#8134)
2018-05-21 16:24:38 -05:00
gdk-pixbuf
…
gdl
GDL and missing dependencies (#8283)
2018-06-08 08:35:28 -05:00
geant4
…
gearshifft
Further improvements to version parsing
2018-07-25 23:10:10 -07:00
gemmlowp
Add top-level attributes for hg, svn, and git A-L packages
2018-07-25 23:10:10 -07:00
genemark-et
…
genomefinisher
…
genometools
…
geopm
Add top-level attributes for hg, svn, and git A-L packages
2018-07-25 23:10:10 -07:00
geos
Add Python/Ruby bindings to GEOS package (#8218)
2018-05-21 15:59:50 -05:00
gettext
Fix gettext: Problem with libxml2 (#8132)
2018-05-26 10:18:14 -05:00
gflags
…
ghost
Add top-level attributes for hg, svn, and git A-L packages
2018-07-25 23:10:10 -07:00
ghostscript
…
ghostscript-fonts
…
giflib
…
git
Fix digests for git@2.17.0 and git@2.17.1 (#8652)
2018-07-06 14:57:45 -05:00
git-imerge
…
git-lfs
Add top-level attributes for hg, svn, and git A-L packages
2018-07-25 23:10:10 -07:00
gl2ps
…
glew
…
glfmultiples
…
glib
glib: Update to 2.56.1 (#8523)
2018-06-20 11:20:04 -05:00
glibmm
new packages: workrave and its dependencies (#7753)
2018-06-21 18:25:26 -07:00
glimmer
…
glm
…
global
…
globalarrays
Update GlobalArrays package to new releases (#7840)
2018-05-21 20:06:29 -05:00
globus-toolkit
…
glog
Glog: make is a function (#8648)
2018-07-06 07:15:47 -05:00
gloo
Add top-level attributes for hg, svn, and git A-L packages
2018-07-25 23:10:10 -07:00
glpk
…
glproto
…
glvis
Add libs attribute to mesa and mesa-glu packages (#8904)
2018-08-07 10:18:05 +02:00
gmake
gmake: fix build with glibc 2.27 (#8344)
2018-06-01 10:47:13 -05:00
gmap-gsnap
…
gmime
…
gmp
…
gmsh
…
gnat
…
gnu-prolog
…
gnupg
…
gnuplot
…
gnutls
…
go
go: Update to 1.10.3 (#8426)
2018-06-08 07:35:43 -05:00
go-bootstrap
Further improvements to version parsing
2018-07-25 23:10:10 -07:00
gobject-introspection
…
googletest
googletest: add a shared variant for all supported versions (#8373)
2018-06-07 10:34:37 -05:00
gotcha
Add top-level attributes for hg, svn, and git A-L packages
2018-07-25 23:10:10 -07:00
gource
…
gperf
…
gperftools
gperftools: use unwind virtual package
2018-08-06 22:01:50 -07:00
gplates
gplates: new package (#8336)
2018-06-13 08:57:52 -05:00
grackle
…
gradle
Bump gradle to 4.8.1. (#8625)
2018-07-02 12:46:46 -05:00
grandr
…
graph500
…
graphicsmagick
GDL and missing dependencies (#8283)
2018-06-08 08:35:28 -05:00
graphlib
…
graphmap
Add top-level attributes for hg, svn, and git A-L packages
2018-07-25 23:10:10 -07:00
graphviz
Replace pkg-config dependencies with virtual (#8783)
2018-08-02 13:29:04 -04:00
grass
Package/grass (#8505)
2018-06-22 18:03:05 -05:00
grib-api
…
grnboost
New package: GRNBoost (#8763)
2018-08-02 13:46:36 -04:00
groff
…
gromacs
Add top-level attributes for hg, svn, and git A-L packages
2018-07-25 23:10:10 -07:00
gsl
GSL: 2.5 is a new version. (#8827)
2018-07-30 08:38:37 +02:00
gslib
Add top-level attributes for hg, svn, and git A-L packages
2018-07-25 23:10:10 -07:00
gtkmm
new packages: workrave and its dependencies (#7753)
2018-06-21 18:25:26 -07:00
gtkorvo-atl
Add top-level attributes for hg, svn, and git A-L packages
2018-07-25 23:10:10 -07:00
gtkorvo-cercs-env
Add top-level attributes for hg, svn, and git A-L packages
2018-07-25 23:10:10 -07:00
gtkorvo-dill
Add top-level attributes for hg, svn, and git A-L packages
2018-07-25 23:10:10 -07:00
gtkorvo-enet
Gtkorvo updates (#8663)
2018-07-10 12:50:10 -05:00
gtkplus
…
gts
…
guidance
…
guile
…
gurobi
…
h5hut
…
h5part
…
h5utils
…
h5z-zfp
Add top-level attributes for hg, svn, and git A-L packages
2018-07-25 23:10:10 -07:00
hacckernels
Add top-level attributes for hg, svn, and git A-L packages
2018-07-25 23:10:10 -07:00
hadoop
…
halc
halc: Create new package. (#8795)
2018-07-26 15:55:43 -05:00
hapcut2
Add top-level attributes for hg, svn, and git A-L packages
2018-07-25 23:10:10 -07:00
hapdip
Add top-level attributes for hg, svn, and git A-L packages
2018-07-25 23:10:10 -07:00
haploview
…
harfbuzz
…
harminv
…
hdf
…
hdf5
hdf5: Fix build with %gcc@8 (#8788)
2018-07-26 15:58:00 -05:00
hdf5-blosc
Add top-level attributes for hg, svn, and git A-L packages
2018-07-25 23:10:10 -07:00
help2man
…
hepmc
…
heppdt
…
hic-pro
HiC-pro depends on python+ucs4. (#8564)
2018-06-25 12:04:00 -05:00
highfive
…
highwayhash
Add top-level attributes for hg, svn, and git A-L packages
2018-07-25 23:10:10 -07:00
hiop
Add top-level attributes for hg, svn, and git A-L packages
2018-07-25 23:10:10 -07:00
hisat2
…
hisea
…
hmmer
hmmer: added version 3.2.1 & updated URL (#8787)
2018-07-26 10:07:55 -05:00
hoomd-blue
All git URLs end in .git
2018-07-25 23:10:10 -07:00
hpccg
…
hpctoolkit
All git URLs end in .git
2018-07-25 23:10:10 -07:00
hpctoolkit-externals
All git URLs end in .git
2018-07-25 23:10:10 -07:00
hpgmg
Add top-level attributes for hg, svn, and git A-L packages
2018-07-25 23:10:10 -07:00
hpl
…
hpx
…
hpx5
…
hsakmt
…
hstr
…
htop
…
htslib
…
httpie
…
hub
Replace git=git with explicit branch names
2018-07-25 23:10:10 -07:00
hunspell
…
hwloc
…
hybpiper
…
hydra
…
hydrogen
Add top-level attributes for hg, svn, and git A-L packages
2018-07-25 23:10:10 -07:00
hypre
Add top-level attributes for hg, svn, and git A-L packages
2018-07-25 23:10:10 -07:00
i3
Replace pkg-config dependencies with virtual (#8783)
2018-08-02 13:29:04 -04:00
ibmisc
…
iceauth
…
icedtea
…
icet
Add top-level attributes for hg, svn, and git A-L packages
2018-07-25 23:10:10 -07:00
ico
…
icu4c
…
id3lib
…
idba
…
igraph
…
igv
…
igvtools
…
ilmbase
…
image-magick
…
imake
…
imp
…
impute2
…
infernal
…
inputproto
…
intel
…
intel-daal
…
intel-gpu-tools
…
intel-ipp
…
intel-mkl
…
intel-mkl-dnn
…
intel-mpi
…
intel-parallel-studio
…
intel-tbb
intel-tbb: Add tm variant to disable transactional memory. (#8799)
2018-07-25 23:14:17 -07:00
intel-xed
All git URLs end in .git
2018-07-25 23:10:10 -07:00
intltool
…
ior
…
iozone
…
iperf2
Packaged iperf2 (#8765)
2018-07-19 17:55:06 -05:00
iperf3
Packaged iperf3 (#8762)
2018-07-19 16:02:55 -05:00
ipopt
…
isaac
Add top-level attributes for hg, svn, and git A-L packages
2018-07-25 23:10:10 -07:00
isaac-server
Add top-level attributes for hg, svn, and git A-L packages
2018-07-25 23:10:10 -07:00
isl
…
itstool
…
itsx
…
jags
…
jansson
…
jasper
Add JasPer 2.0.14 (#8207)
2018-05-26 10:37:48 -05:00
jbigkit
…
jchronoss
…
jdk
…
jellyfish
Remove unnecessary version-specific URL overrides (#8693)
2018-07-12 07:28:11 +02:00
jemalloc
…
jmol
…
jq
…
json-c
gplates: new package (#8336)
2018-06-13 08:57:52 -05:00
json-cwx
…
json-glib
…
jsoncpp
add commented test dependencies (#8407)
2018-06-07 10:33:59 -05:00
judy
…
julia
Add top-level attributes for hg, svn, and git A-L packages
2018-07-25 23:10:10 -07:00
k8
…
kahip
Replace git=git with explicit branch names
2018-07-25 23:10:10 -07:00
kaiju
…
kaks-calculator
…
kaldi
Add top-level attributes for hg, svn, and git A-L packages
2018-07-25 23:10:10 -07:00
kallisto
…
kbproto
…
kdiff3
…
kealib
Add top-level attributes for hg, svn, and git A-L packages
2018-07-25 23:10:10 -07:00
kentutils
Add top-level attributes for hg, svn, and git A-L packages
2018-07-25 23:10:10 -07:00
kim-api
kim-api: initial commit (#8873)
2018-08-04 16:47:35 -05:00
kmergenie
…
kokkos
Add top-level attributes for hg, svn, and git A-L packages
2018-07-25 23:10:10 -07:00
kraken
…
krb5
…
krims
Add top-level attributes for hg, svn, and git A-L packages
2018-07-25 23:10:10 -07:00
kripke
Update broken codesign.llnl.gov urls (#8880)
2018-08-03 10:25:10 -05:00
kvasir-mpl
Add top-level attributes for hg, svn, and git A-L packages
2018-07-25 23:10:10 -07:00
kvtree
ECP VELOC Package update (#8910)
2018-08-08 21:40:38 -04:00
laghos
Update homepage for laghos (#8864)
2018-08-02 13:03:52 -04:00
lammps
All git URLs end in .git
2018-07-25 23:10:10 -07:00
last
…
latte
Further improvements to version parsing
2018-07-25 23:10:10 -07:00
launchmon
…
lazyten
Add top-level attributes for hg, svn, and git A-L packages
2018-07-25 23:10:10 -07:00
lbann
Add top-level attributes for hg, svn, and git A-L packages
2018-07-25 23:10:10 -07:00
lbxproxy
…
lcals
Update broken codesign.llnl.gov urls (#8880)
2018-08-03 10:25:10 -05:00
lcms
Add lcms 2.9 (#8219)
2018-05-21 15:59:11 -05:00
ldc
Further improvements to version parsing
2018-07-25 23:10:10 -07:00
ldc-bootstrap
…
legion
Add top-level attributes for hg, svn, and git A-L packages
2018-07-25 23:10:10 -07:00
leveldb
…
lftp
…
libaec
…
libaio
…
libapplewm
…
libarchive
…
libassuan
…
libatomic-ops
…
libbeagle
libbeagle: add java dependency so jni hooks get built (#8524)
2018-07-22 17:16:43 -05:00
libbeato
New packages: libbeato bwtool. (#8681)
2018-07-11 10:33:44 -05:00
libbsd
…
libbson
…
libcanberra
…
libcap
…
libceed
Add top-level attributes for hg, svn, and git A-L packages
2018-07-25 23:10:10 -07:00
libcerf
…
libcheck
…
libcint
…
libcircle
…
libconfig
Further improvements to version parsing
2018-07-25 23:10:10 -07:00
libcroco
…
libctl
…
libdivsufsort
…
libdmx
…
libdrm
…
libdwarf
libdwarf: remove use of hide_files()
2018-08-02 19:00:52 -07:00
libedit
…
libelf
…
libemos
…
libepoxy
…
libev
Replace git=git with explicit branch names
2018-07-25 23:10:10 -07:00
libevent
…
libevpath
Add top-level attributes for hg, svn, and git A-L packages
2018-07-25 23:10:10 -07:00
libfabric
…
libffi
…
libffs
Add top-level attributes for hg, svn, and git A-L packages
2018-07-25 23:10:10 -07:00
libfontenc
…
libfs
…
libgcrypt
…
libgd
…
libgeotiff
Add libgeotiff package (#8203)
2018-05-20 15:02:49 -05:00
libgit2
…
libgpg-error
…
libgpuarray
…
libgridxc
…
libgtextutils
…
libharu
Add top-level attributes for hg, svn, and git A-L packages
2018-07-25 23:10:10 -07:00
libhio
added line 43 (#8369)
2018-06-04 15:04:45 -05:00
libice
…
libiconv
…
libint
…
libjpeg
Update the hash of libjpeg v9c. (#8230)
2018-05-21 15:53:55 -05:00
libjpeg-turbo
libjpeg-turbo: updated checksums and added autoreconf for older versions (#8411)
2018-06-06 16:18:03 -05:00
libksba
…
liblbxutil
…
liblockfile
…
libmatheval
fix to build libmatheval with guile@2.0: (#8680)
2018-07-22 17:07:44 -05:00
libmaxminddb
…
libmesh
…
libmng
…
libmongoc
…
libmonitor
libmonitor: update version and add variant to configure (#8834)
2018-08-03 14:00:12 -04:00
libnbc
…
libnl
…
libnova
libnova: new package (#8666)
2018-07-09 16:16:09 -05:00
libogg
…
liboldx
…
libpcap
…
libpciaccess
…
libpfm4
…
libpipeline
add commented test dependencies (#8407)
2018-06-07 10:33:59 -05:00
libpng
…
libpsl
…
libpthread-stubs
…
libquo
Add top-level attributes for hg, svn, and git A-L packages
2018-07-25 23:10:10 -07:00
librom
Add top-level attributes for hg, svn, and git A-L packages
2018-07-25 23:10:10 -07:00
libshm
Add top-level attributes for hg, svn, and git A-L packages
2018-07-25 23:10:10 -07:00
libsigcpp
new packages: workrave and its dependencies (#7753)
2018-06-21 18:25:26 -07:00
libsigsegv
…
libsm
…
libsodium
…
libspatialindex
…
libsplash
Add top-level attributes for hg, svn, and git A-L packages
2018-07-25 23:10:10 -07:00
libssh
…
libssh2
…
libsvm
…
libszip
…
libtermkey
…
libtiff
Add libtiff 4.0.9 (#8201)
2018-05-20 15:01:11 -05:00
libtool
Libtool: version 'develop' (#8894)
2018-08-06 10:43:26 -05:00
libunistring
…
libunwind
Make libunwind provider of unwind virtual pkg
2018-08-06 22:01:50 -07:00
libuuid
…
libuv
…
libvorbis
…
libvterm
…
libwebsockets
…
libwindowswm
…
libx11
…
libxau
…
libxaw
…
libxaw3d
…
libxc
…
libxcb
…
libxcomposite
…
libxcursor
…
libxdamage
…
libxdmcp
…
libxevie
…
libxext
…
libxfixes
…
libxfont
…
libxfont2
…
libxfontcache
…
libxft
…
libxi
…
libxinerama
…
libxkbcommon
…
libxkbfile
…
libxkbui
…
libxml2
Add libxml2 2.9.8 (#8211)
2018-05-20 15:04:47 -05:00
libxmu
…
libxp
…
libxpm
…
libxpresent
…
libxprintapputil
…
libxprintutil
…
libxrandr
…
libxrender
…
libxres
…
libxscrnsaver
…
libxshmfence
libxshmfence: Update to 1.3 (#8667)
2018-07-10 07:58:44 -05:00
libxslt
…
libxsmm
Replace git=git with explicit branch names
2018-07-25 23:10:10 -07:00
libxstream
…
libxt
…
libxtrap
…
libxtst
…
libxv
…
libxvmc
…
libxxf86dga
…
libxxf86misc
…
libxxf86vm
…
libyogrt
…
libzip
…
likwid
LIKWID: Switch to perf_event backend to allow user installations but with limited features (#8886)
2018-08-06 09:21:30 -05:00
linkphase3
Add top-level attributes for hg, svn, and git A-L packages
2018-07-25 23:10:10 -07:00
linux-headers
…
listres
…
llvm
Package/flang: Updated to use own version of llvm (#8766)
2018-08-03 20:35:09 -04:00
llvm-openmp-ompt
Add top-level attributes for hg, svn, and git A-L packages
2018-07-25 23:10:10 -07:00
lmdb
…
lmod
lmod: add version 7.8 (#8838)
2018-07-31 23:19:41 -07:00
lndir
…
log4cplus
Add new versions for log4cplus. (#8621)
2018-07-03 10:08:22 -05:00
log4cxx
…
loki
…
lordec
…
lrslib
…
lrzip
Replace git=git with explicit branch names
2018-07-25 23:10:10 -07:00
lsof
…
ltrace
…
lua
Add unzip runtime dependency to lua package (#8831)
2018-08-05 13:26:22 -05:00
lua-bitlib
…
lua-jit
…
lua-lpeg
…
lua-luafilesystem
…
lua-luaposix
…
lua-mpack
…
luit
…
lulesh
Update broken codesign.llnl.gov urls (#8880)
2018-08-03 10:25:10 -05:00
lumpy-sv
…
lwgrp
…
lwm2
Add top-level attributes for hg, svn, and git A-L packages
2018-07-25 23:10:10 -07:00
lz4
add commented test dependencies (#8407)
2018-06-07 10:33:59 -05:00
lzma
…
lzo
…
m4
Fix m4 on OS X highsierra (#8559)
2018-06-23 20:34:04 -05:00
macsio
Add top-level attributes for git M-P packages
2018-07-25 23:10:10 -07:00
mad-numdiff
All git URLs end in .git
2018-07-25 23:10:10 -07:00
mafft
…
magics
…
magma
…
makedepend
…
mallocmc
Add top-level attributes for git M-P packages
2018-07-25 23:10:10 -07:00
man-db
…
manta
…
maq
…
mariadb
…
masa
Add top-level attributes for git M-P packages
2018-07-25 23:10:10 -07:00
masurca
…
matio
…
matlab
style: bring packages in compliance with pep8-naming
2018-07-19 00:41:36 -07:00
maven
…
maverick
…
mawk
…
mbedtls
…
mc
Replace pkg-config dependencies with virtual (#8783)
2018-08-02 13:29:04 -04:00
mcl
…
mdtest
Add top-level attributes for git M-P packages
2018-07-25 23:10:10 -07:00
med
add MoFEM packages (#8700)
2018-07-22 15:26:30 -05:00
meep
…
mefit
Add top-level attributes for git M-P packages
2018-07-25 23:10:10 -07:00
megahit
A new package: megahit. (#8471)
2018-06-14 13:45:12 -05:00
memaxes
…
meme
…
memkind
Create new package: memkind (#8242)
2018-05-22 13:37:03 -05:00
meraculous
Add top-level attributes for git M-P packages
2018-07-25 23:10:10 -07:00
mercurial
…
mesa
Add libs attribute to mesa and mesa-glu packages (#8904)
2018-08-07 10:18:05 +02:00
mesa-glu
Add libs attribute to mesa and mesa-glu packages (#8904)
2018-08-07 10:18:05 +02:00
meshkit
…
meson
…
mesquite
…
metabat
…
metaphysicl
…
metasv
…
metis
style: bring packages in compliance with pep8-naming
2018-07-19 00:41:36 -07:00
mfem
mfem+libunwind: use "unwind" virtual package
2018-08-06 22:01:50 -07:00
microbiomeutil
…
minced
…
mindthegap
Add top-level attributes for git M-P packages
2018-07-25 23:10:10 -07:00
miniaero
Add top-level attributes for git M-P packages
2018-07-25 23:10:10 -07:00
miniamr
Further improvements to version parsing
2018-07-25 23:10:10 -07:00
miniasm
Add top-level attributes for git M-P packages
2018-07-25 23:10:10 -07:00
miniconda2
Bump miniconda to 4.5.4. (#8435)
2018-06-10 15:15:43 -05:00
miniconda3
Bump miniconda to 4.5.4. (#8435)
2018-06-10 15:15:43 -05:00
minife
…
minighost
…
minigmg
…
minimap2
…
minimd
…
miniqmc
…
minisign
…
minismac2d
…
minitri
…
minixyce
…
minuit
Added minuit package (#8536)
2018-06-22 11:27:25 -05:00
mira
…
mirdeep2
Package/mirdeep/fix for new url take2 (#8247)
2018-05-23 07:25:42 -05:00
mitofates
mitofates: more deps and a patch to make it functional (#8686)
2018-07-12 10:23:22 +02:00
mitos
Add top-level attributes for git M-P packages
2018-07-25 23:10:10 -07:00
mkfontdir
…
mkfontscale
…
mlhka
Add top-level attributes for git M-P packages
2018-07-25 23:10:10 -07:00
moab
add necessary dependence on lapacak, and fix ld_flags for blas (#8776)
2018-07-22 16:32:47 -05:00
modern-wheel
…
mofem-cephas
Add top-level attributes for git M-P packages
2018-07-25 23:10:10 -07:00
mofem-fracture-module
Add top-level attributes for git M-P packages
2018-07-25 23:10:10 -07:00
mofem-minimal-surface-equation
Add top-level attributes for git M-P packages
2018-07-25 23:10:10 -07:00
mofem-users-modules
add MoFEM packages (#8700)
2018-07-22 15:26:30 -05:00
molcas
…
mono
…
mosh
…
mothur
mothur: mpi not used (#8706)
2018-07-13 20:31:25 -05:00
motif
…
motioncor2
…
mozjs
…
mpark-variant
…
mpc
…
mpe2
…
mpest
…
mpfr
…
mpibash
…
mpiblast
…
mpich
Add top-level attributes for git M-P packages
2018-07-25 23:10:10 -07:00
mpifileutils
Replace git=git with explicit branch names
2018-07-25 23:10:10 -07:00
mpilander
Add top-level attributes for git M-P packages
2018-07-25 23:10:10 -07:00
mpileaks
…
mpip
…
mpir
Replace git=git with explicit branch names
2018-07-25 23:10:10 -07:00
mpix-launch-swift
Add top-level attributes for git M-P packages
2018-07-25 23:10:10 -07:00
mrbayes
Add top-level attributes for git M-P packages
2018-07-25 23:10:10 -07:00
mrnet
Replace git=git with explicit branch names
2018-07-25 23:10:10 -07:00
mrtrix3
Add top-level attributes for git M-P packages
2018-07-25 23:10:10 -07:00
mscgen
…
msgpack-c
Add msgpack-c 3.0.1 (#8264)
2018-05-24 10:47:31 -05:00
mshadow
Add top-level attributes for git M-P packages
2018-07-25 23:10:10 -07:00
multitail
…
multiverso
Add top-level attributes for git M-P packages
2018-07-25 23:10:10 -07:00
mummer
…
mumps
Change MUMPS to allow it to build with clang+xlf compiler combination (#8388)
2018-08-02 14:23:37 -04:00
munge
…
muparser
…
muscle
…
muse
…
muster
…
mvapich2
Bump mvapich2 to the latest v2.3 release. (#8892)
2018-08-06 12:03:33 +02:00
mxml
…
mxnet
…
nag
…
nalu
Add top-level attributes for git M-P packages
2018-07-25 23:10:10 -07:00
nalu-wind
Add top-level attributes for git M-P packages
2018-07-25 23:10:10 -07:00
namd
…
nano
…
nanoflann
…
nanopb
…
nasm
nasm: Fix compilation with GCC 8 (#8307)
2018-05-29 10:28:17 -05:00
nauty
…
ncbi-magicblast
New package ncbi-magicblast (#8517)
2018-06-22 17:48:32 -05:00
ncbi-rmblastn
…
ncbi-toolkit
style: bring packages in compliance with pep8-naming
2018-07-19 00:41:36 -07:00
nccl
…
nccmp
…
ncdu
…
ncftp
…
ncl
Ncl update (#8747)
2018-07-22 16:54:06 -05:00
nco
…
ncurses
Add ncurses 6.1 (#8257)
2018-05-23 13:27:22 -05:00
ncview
…
ndiff
…
nek5000
Add top-level attributes for git M-P packages
2018-07-25 23:10:10 -07:00
nekbone
Replace git=git with explicit branch names
2018-07-25 23:10:10 -07:00
nekcem
Add top-level attributes for git M-P packages
2018-07-25 23:10:10 -07:00
nektar
Adding nektar++ package (#8167)
2018-06-01 09:30:06 -05:00
neovim
package neovim: add info for version 0.3.1 (#8866)
2018-08-02 13:04:59 -04:00
netcdf
style: bring packages in compliance with pep8-naming
2018-07-19 00:41:36 -07:00
netcdf-cxx
…
netcdf-cxx4
netcdf-cxx4: Update to use CPPFLAGS (#8148)
2018-05-21 16:23:35 -05:00
netcdf-fortran
netcdf-fortran: enforce autoreconf when building with NAG. (#8844)
2018-08-02 08:32:20 -05:00
netgauge
…
netgen
netgen should depend on zlib (#8473)
2018-06-14 13:43:43 -05:00
netlib-lapack
Small patch for netlib-lapack. (#8854)
2018-08-01 18:55:07 -05:00
netlib-scalapack
…
netlib-xblas
…
nettle
Update nettle package with info for v3.4 (#8653)
2018-07-06 14:57:32 -05:00
neuron
Replace pkg-config dependencies with virtual (#8783)
2018-08-02 13:29:04 -04:00
nextflow
…
nfft
…
nghttp2
…
nginx
…
ngmlr
…
ninja
…
ninja-fortran
…
nlohmann-json
…
nlopt
Add top-level attributes for git M-P packages
2018-07-25 23:10:10 -07:00
nmap
Added nmap version 7.70 (#8606)
2018-06-28 15:32:43 -05:00
nnvm
Add top-level attributes for git M-P packages
2018-07-25 23:10:10 -07:00
node-js
…
notmuch
…
npb
…
npm
…
npth
…
nspr
…
numactl
numactl: fix build with glibc-2.26 (#8615)
2018-06-29 14:41:52 -05:00
numdiff
…
nut
Add top-level attributes for git M-P packages
2018-07-25 23:10:10 -07:00
nwchem
nwchem: add link type to python dep (#8759)
2018-07-19 12:03:40 -05:00
ocaml
…
occa
Add top-level attributes for git M-P packages
2018-07-25 23:10:10 -07:00
oce
style: make core comply with pep8-naming
2018-07-19 00:41:36 -07:00
oclint
…
oclock
…
octave
…
octave-optim
…
octave-splines
…
octave-struct
…
octopus
…
of-adios-write
Add top-level attributes for git M-P packages
2018-07-25 23:10:10 -07:00
of-precice
Add top-level attributes for git M-P packages
2018-07-25 23:10:10 -07:00
omega-h
omega-h: fix -std=c++11 build error (#8543)
2018-06-23 07:25:33 -05:00
ompss
…
ompt-openmp
…
oniguruma
…
ont-albacore
added albacore version 2.3.1 (#8513)
2018-06-19 11:16:41 -05:00
opa-psm2
…
opam
…
opari2
…
openbabel
…
openblas
openblas: add version 0.3.2 (#8833)
2018-08-01 19:14:48 -05:00
opencoarrays
…
opencv
Add top-level attributes for hg, svn, and git A-L packages
2018-07-25 23:10:10 -07:00
openexr
…
openfast
Add top-level attributes for git M-P packages
2018-07-25 23:10:10 -07:00
openfoam-com
Add top-level attributes for git M-P packages
2018-07-25 23:10:10 -07:00
openfoam-org
Replace git=git with explicit branch names
2018-07-25 23:10:10 -07:00
openfst
Add far variant to openfst package (#8299)
2018-05-28 13:45:56 -05:00
opengl
Add libs attribute to mesa and mesa-glu packages (#8904)
2018-08-07 10:18:05 +02:00
openglu
Add libs attribute to mesa and mesa-glu packages (#8904)
2018-08-07 10:18:05 +02:00
openjpeg
…
openmc
Add top-level attributes for git M-P packages
2018-07-25 23:10:10 -07:00
openmpi
Fix openmpi to work with slurm/pmi and mxm (#8427)
2018-08-02 14:06:39 -04:00
opennurbs
Add top-level attributes for git M-P packages
2018-07-25 23:10:10 -07:00
openpmd-api
Add top-level attributes for git M-P packages
2018-07-25 23:10:10 -07:00
openscenegraph
…
openslide
…
openspeedshop
Add top-level attributes for git M-P packages
2018-07-25 23:10:10 -07:00
openspeedshop-utils
Add top-level attributes for git M-P packages
2018-07-25 23:10:10 -07:00
openssh
…
openssl
openssl: add new version 1.0.2o (#8486)
2018-06-15 09:54:52 +02:00
opium
…
opus
…
orfm
…
orthofinder
…
orthomcl
…
osu-micro-benchmarks
…
otf
…
otf2
…
p4est
…
p7zip
…
pacbio-daligner
Add top-level attributes for git M-P packages
2018-07-25 23:10:10 -07:00
pacbio-damasker
Add top-level attributes for git M-P packages
2018-07-25 23:10:10 -07:00
pacbio-dazz-db
Add top-level attributes for git M-P packages
2018-07-25 23:10:10 -07:00
pacbio-dextractor
Add top-level attributes for git M-P packages
2018-07-25 23:10:10 -07:00
pagit
…
pagmo
…
paml
…
panda
…
pandaseq
Replace pkg-config dependencies with virtual (#8783)
2018-08-02 13:29:04 -04:00
pango
…
pangomm
new packages: workrave and its dependencies (#7753)
2018-06-21 18:25:26 -07:00
papi
papi: Update to 5.6.0 and fix build with %gcc@8 (#8796)
2018-07-26 10:02:07 -05:00
papyrus
Add top-level attributes for git M-P packages
2018-07-25 23:10:10 -07:00
paradiseo
Add top-level attributes for git M-P packages
2018-07-25 23:10:10 -07:00
parallel
…
parallel-netcdf
Turning off parallel during make install for parallel-netcdf. (#8186)
2018-05-18 12:12:43 -05:00
paraver
…
paraview
paraview: set PARAVIEW_VTK_DIR in spack_env and run_env (#8308)
2018-05-30 10:35:39 -05:00
parmetis
…
parmgridgen
…
parquet
Parquet: new packages (#8601)
2018-07-04 07:24:38 -05:00
parsimonator
Add top-level attributes for git M-P packages
2018-07-25 23:10:10 -07:00
parsplice
Add top-level attributes for git M-P packages
2018-07-25 23:10:10 -07:00
partitionfinder
…
patch
…
patchelf
…
pathfinder
…
pax-utils
…
pbbam
pbbam: new package (#8365)
2018-06-07 22:44:30 -05:00
pbmpi
Add top-level attributes for git M-P packages
2018-07-25 23:10:10 -07:00
pcma
…
pcre
Add PCRE 8.42 (#8213)
2018-05-20 15:05:29 -05:00
pcre2
Add PCRE2 10.31 (#8214)
2018-05-20 15:05:47 -05:00
pdf2svg
…
pdftk
new package: pdftk (#8166)
2018-06-12 11:25:20 -07:00
pdsh
…
pdt
Add new versions for TAU and PDT package (#8497)
2018-06-17 17:21:00 -05:00
pegtl
Further improvements to version parsing
2018-07-25 23:10:10 -07:00
pennant
…
percept
Add top-level attributes for git M-P packages
2018-07-25 23:10:10 -07:00
perl
Make read only source file writeable in perl before patch to avoid failures on lustre filesystem. (#8764)
2018-07-22 16:51:59 -05:00
perl-algorithm-diff
…
perl-app-cmd
…
perl-array-utils
…
perl-b-hooks-endofscope
…
perl-bio-perl
…
perl-bit-vector
…
perl-cairo
…
perl-capture-tiny
…
perl-carp-clan
…
perl-class-data-inheritable
…
perl-class-inspector
…
perl-class-load
…
perl-class-load-xs
…
perl-compress-raw-bzip2
A new perl package: perl-io-compress. (#8566)
2018-06-25 12:02:04 -05:00
perl-compress-raw-zlib
A new perl package: perl-io-compress. (#8566)
2018-06-25 12:02:04 -05:00
perl-contextual-return
Further improvements to version parsing
2018-07-25 23:10:10 -07:00
perl-cpan-meta-check
…
perl-data-optlist
…
perl-data-stag
…
perl-dbd-mysql
…
perl-dbfile
…
perl-dbi
…
perl-devel-cycle
…
perl-devel-globaldestruction
…
perl-devel-overloadinfo
…
perl-devel-stacktrace
…
perl-digest-md5
…
perl-dist-checkconflicts
…
perl-encode-locale
…
perl-eval-closure
…
perl-exception-class
…
perl-exporter-tiny
…
perl-extutils-depends
…
perl-extutils-makemaker
…
perl-extutils-pkgconfig
Replace pkg-config dependencies with virtual (#8783)
2018-08-02 13:29:04 -04:00
perl-file-copy-recursive
…
perl-file-listing
…
perl-file-pushd
…
perl-file-sharedir-install
…
perl-file-slurp-tiny
…
perl-file-slurper
…
perl-file-which
…
perl-font-ttf
…
perl-gd
…
perl-gd-graph
Further improvements to version parsing
2018-07-25 23:10:10 -07:00
perl-gd-text
…
perl-graph
…
perl-graph-readwrite
…
perl-html-parser
…
perl-html-tagset
…
perl-http-cookies
…
perl-http-daemon
…
perl-http-date
…
perl-http-message
…
perl-http-negotiate
…
perl-inline
…
perl-inline-c
…
perl-intervaltree
…
perl-io-compress
Further improvements to version parsing
2018-07-25 23:10:10 -07:00
perl-io-html
…
perl-io-sessiondata
…
perl-io-socket-ssl
…
perl-io-string
…
perl-json
…
perl-libwww-perl
…
perl-list-moreutils
…
perl-log-log4perl
…
perl-lwp
…
perl-lwp-mediatypes
…
perl-lwp-protocol-https
…
perl-math-cdf
…
perl-math-cephes
perl-math-cephes: new package (#8671)
2018-07-11 12:40:39 -05:00
perl-math-matrixreal
…
perl-module-build
…
perl-module-implementation
…
perl-module-runtime
…
perl-module-runtime-conflicts
…
perl-moose
…
perl-mozilla-ca
…
perl-mro-compat
…
perl-namespace-clean
…
perl-net-http
…
perl-net-scp-expect
…
perl-net-ssleay
…
perl-package-deprecationmanager
…
perl-package-stash
…
perl-package-stash-xs
…
perl-padwalker
…
perl-parallel-forkmanager
…
perl-params-util
…
perl-parse-recdescent
…
perl-pdf-api2
…
perl-pegex
…
perl-perlio-gzip
…
perl-perlio-utf8-strict
…
perl-soap-lite
Further improvements to version parsing
2018-07-25 23:10:10 -07:00
perl-star-fusion
Add top-level attributes for git M-P packages
2018-07-25 23:10:10 -07:00
perl-statistics-descriptive
…
perl-statistics-pca
…
perl-sub-exporter
…
perl-sub-exporter-progressive
…
perl-sub-identify
…
perl-sub-install
…
perl-sub-name
…
perl-sub-uplevel
…
perl-svg
…
perl-swissknife
…
perl-task-weaken
…
perl-term-readkey
…
perl-test-cleannamespaces
…
perl-test-deep
…
perl-test-differences
…
perl-test-exception
…
perl-test-fatal
…
perl-test-memory-cycle
…
perl-test-most
…
perl-test-needs
…
perl-test-requires
…
perl-test-requiresinternet
…
perl-test-warn
…
perl-test-warnings
…
perl-text-csv
…
perl-text-diff
…
perl-text-simpletable
…
perl-text-soundex
perl-text-soundex: new package (#8279)
2018-05-25 14:00:12 -05:00
perl-text-unidecode
…
perl-time-hires
…
perl-time-piece
…
perl-try-tiny
…
perl-uri
…
perl-uri-escape
…
perl-version
Further improvements to version parsing
2018-07-25 23:10:10 -07:00
perl-want
…
perl-www-robotrules
…
perl-xml-libxml
…
perl-xml-parser
…
perl-xml-parser-lite
…
perl-xml-simple
…
perl-yaml-libyaml
…
petsc
Add top-level attributes for git M-P packages
2018-07-25 23:10:10 -07:00
pexsi
Update and Bugfix for pexsi/package.py (#8822)
2018-08-02 11:24:57 -05:00
pfft
…
pflotran
Add top-level attributes for git M-P packages
2018-07-25 23:10:10 -07:00
pfunit
…
pgdspider
…
pgi
…
pgmath
Package/flang: Updated to use own version of llvm (#8766)
2018-08-03 20:35:09 -04:00
phantompeakqualtools
…
phast
New package: phast (#7993)
2018-06-04 13:22:47 -05:00
phasta
Add top-level attributes for git M-P packages
2018-07-25 23:10:10 -07:00
phist
Add top-level attributes for git M-P packages
2018-07-25 23:10:10 -07:00
phylip
…
picard
Add missing expand=False for v2.18.3 (#8342)
2018-05-31 20:24:33 -05:00
pidx
Add top-level attributes for git M-P packages
2018-07-25 23:10:10 -07:00
pigz
Use GitHub URL for pigz, supports > 1 release (#8339)
2018-05-31 20:28:08 -05:00
pilon
…
pindel
…
piranha
Replace git=git with explicit branch names
2018-07-25 23:10:10 -07:00
pism
Add top-level attributes for git M-P packages
2018-07-25 23:10:10 -07:00
pixman
Fixed linking of R with MKL + configure issue in a dep (pixman) (#8449)
2018-06-22 08:03:47 -05:00
pkg-config
…
pkgconf
Add pkgconf 1.4.2 (#8256)
2018-05-23 13:27:39 -05:00
planck-likelihood
style: bring packages in compliance with pep8-naming
2018-07-19 00:41:36 -07:00
plasma
Add top-level attributes for hg, svn, and git A-L packages
2018-07-25 23:10:10 -07:00
platypus
style: bring packages in compliance with pep8-naming
2018-07-19 00:41:36 -07:00
plink
…
plplot
GDL and missing dependencies (#8283)
2018-06-08 08:35:28 -05:00
plumed
plumed: added versions 2.4.1 and 2.3.5 (#8297)
2018-05-28 08:01:51 -05:00
pmgr-collective
…
pmix
…
pnfft
Added gsl dependency to pnfft (#8255)
2018-05-24 16:24:47 -05:00
pngwriter
Add top-level attributes for git M-P packages
2018-07-25 23:10:10 -07:00
pnmpi
…
poamsa
…
pocl
Replace git=git with explicit branch names
2018-07-25 23:10:10 -07:00
polymake
…
poppler
All git URLs end in .git
2018-07-25 23:10:10 -07:00
poppler-data
Add missing dependencies to poppler package (#8220)
2018-05-21 15:58:51 -05:00
porta
…
portage
Add top-level attributes for git M-P packages
2018-07-25 23:10:10 -07:00
postgresql
…
ppl
…
prank
…
precice
Add top-level attributes for git M-P packages
2018-07-25 23:10:10 -07:00
presentproto
…
preseq
…
price
…
primer3
…
prinseq-lite
…
printproto
…
prng
Add new package: prng (#8396)
2018-06-06 12:07:16 -05:00
probconsrna
…
prodigal
…
proj
Add PROJ 5.0.1 (#8233)
2018-05-23 13:29:08 -05:00
protobuf
…
proxymngr
…
pruners-ninja
…
ps-lite
Add top-level attributes for git M-P packages
2018-07-25 23:10:10 -07:00
psi4
…
pslib
GDL and missing dependencies (#8283)
2018-06-08 08:35:28 -05:00
psm
Add top-level attributes for git M-P packages
2018-07-25 23:10:10 -07:00
psmc
Add top-level attributes for git M-P packages
2018-07-25 23:10:10 -07:00
pstreams
…
pugixml
…
pumi
Add top-level attributes for git M-P packages
2018-07-25 23:10:10 -07:00
pv
…
pvm
…
pxz
Replace git=git with explicit branch names
2018-07-25 23:10:10 -07:00
py-3to2
…
py-4suite-xml
…
py-abipy
…
py-adios
Add top-level attributes for git M-P packages
2018-07-25 23:10:10 -07:00
py-affine
…
py-alabaster
…
py-apache-libcloud
…
py-apipkg
…
py-appdirs
…
py-appnope
…
py-apscheduler
…
py-argcomplete
…
py-argparse
…
py-ase
…
py-asn1crypto
…
py-astroid
…
py-astropy
…
py-attrs
…
py-autopep8
…
py-avro
added avro and avro_json_serializer python packages (#8351)
2018-06-01 15:06:27 -05:00
py-avro-json-serializer
added avro and avro_json_serializer python packages (#8351)
2018-06-01 15:06:27 -05:00
py-babel
…
py-backcall
Add py-backcall (#8701)
2018-07-13 10:59:02 -05:00
py-backports-abc
…
py-backports-functools-lru-cache
Remove unnecessary version-specific URL overrides (#8693)
2018-07-12 07:28:11 +02:00
py-backports-shutil-get-terminal-size
views: packages can customize how they're added to views (#7152)
2018-06-26 16:14:05 -07:00
py-backports-ssl-match-hostname
views: packages can customize how they're added to views (#7152)
2018-06-26 16:14:05 -07:00
py-basemap
…
py-bcbio-gff
…
py-beautifulsoup4
…
py-binwalk
…
py-biom-format
Package py-biom-format fixes (#8727)
2018-08-02 13:51:51 -04:00
py-biopython
…
py-bitarray
…
py-bitstring
…
py-bleach
…
py-blessings
…
py-bokeh
…
py-boltons
…
py-bottleneck
…
py-breakseq2
…
py-brian
…
py-brian2
add commented test dependencies (#8407)
2018-06-07 10:33:59 -05:00
py-bsddb3
…
py-bx-python
…
py-cartopy
add package py-cartopy and dependencies (#8406)
2018-06-07 08:10:39 -05:00
py-cclib
…
py-cdat-lite
…
py-cdo
…
py-certifi
…
py-cffi
added py-cffi 1.11.5 (#8349)
2018-06-01 13:13:33 -05:00
py-chardet
…
py-checkm-genome
…
py-cheetah
new packages: workrave and its dependencies (#7753)
2018-06-21 18:25:26 -07:00
py-click
…
py-cligj
…
py-cloudpickle
…
py-cnvkit
…
py-cogent
…
py-colorama
…
py-colormath
…
py-configparser
…
py-counter
…
py-coverage
…
py-cpuinfo
…
py-crispresso
…
py-crossmap
py-crossmap: needs py-setuptools (#8898)
2018-08-06 17:43:14 -05:00
py-cryptography
…
py-csvkit
…
py-current
…
py-cutadapt
py-cutadapt: needs py-setuptools at runtime (#8689)
2018-07-11 14:53:35 -05:00
py-cvxopt
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py-cycler
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py-cython
py-cython: added version 0.28.3 (#8379)
2018-06-05 13:36:29 -05:00
py-dask
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py-dateutil
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py-dbf
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py-decorator
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py-deeptools
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py-dendropy
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py-dill
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py-discover
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py-dlcpar
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py-docopt
Add py-docopt package (#8236)
2018-05-22 10:49:12 -05:00
py-docutils
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py-doxypy
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py-doxypypy
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py-dryscrape
Add top-level attributes for git M-P packages
2018-07-25 23:10:10 -07:00
py-dxchange
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py-dxfile
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py-easybuild-easyblocks
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py-easybuild-easyconfigs
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py-easybuild-framework
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py-edffile
Add top-level attributes for git M-P packages
2018-07-25 23:10:10 -07:00
py-editdistance
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py-elasticsearch
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py-elephant
add commented test dependencies (#8407)
2018-06-07 10:33:59 -05:00
py-emcee
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py-entrypoints
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py-enum34
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py-epydoc
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py-espresso
Add top-level attributes for git M-P packages
2018-07-25 23:10:10 -07:00
py-espressopp
Add top-level attributes for git M-P packages
2018-07-25 23:10:10 -07:00
py-et-xmlfile
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py-eventlet
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py-execnet
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py-fastaindex
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py-fasteners
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py-faststructure
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py-fiscalyear
Add top-level attributes for git M-P packages
2018-07-25 23:10:10 -07:00
py-flake8
add commented test dependencies (#8407)
2018-06-07 10:33:59 -05:00
py-flake8-polyfill
add py-pep8-naming package
2018-07-19 00:41:36 -07:00
py-flask
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py-flask-compress
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py-flask-socketio
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py-flexx
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py-fn
py-fn: new package (#8705)
2018-07-13 20:31:39 -05:00
py-fparser
Add top-level attributes for git M-P packages
2018-07-25 23:10:10 -07:00
py-funcsigs
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py-functools32
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py-future
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py-futures
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py-gdbgui
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py-genders
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py-genshi
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py-gevent
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py-git2
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py-git-review
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py-gnuplot
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py-goatools
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py-gpaw
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py-greenlet
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py-griddataformats
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py-guidata
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py-guiqwt
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py-h5py
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py-html2text
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py-html5lib
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py-htseq
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py-httpbin
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py-hypothesis
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py-idna
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py-igraph
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py-illumina-utils
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py-imageio
Add py-imageio for python3 (#8553)
2018-06-26 12:55:10 -05:00
py-imagesize
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py-iminuit
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py-importlib
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py-ipaddress
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py-ipdb
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py-ipykernel
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py-ipython
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py-ipython-genutils
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py-ipywidgets
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py-isort
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py-itsdangerous
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py-jdcal
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py-jedi
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py-jinja2
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py-joblib
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py-jpype
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py-jsonschema
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py-junit-xml
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py-jupyter-client
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py-jupyter-console
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py-jupyter-core
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py-jupyter-notebook
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py-keras
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py-kiwisolver
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py-lark-parser
Py-lark-parser: new package (#8761)
2018-07-19 14:00:19 -05:00
py-latexcodec
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py-lazy
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py-lazy-object-proxy
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py-lazy-property
Adding lazy property python module (#47) (#8867)
2018-08-02 11:44:16 -05:00
py-lazyarray
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py-libconf
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py-libensemble
Add top-level attributes for git M-P packages
2018-07-25 23:10:10 -07:00
py-line-profiler
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py-linecache2
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py-lit
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py-llvmlite
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py-lmfit
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py-localcider
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py-locket
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py-lockfile
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py-logilab-common
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py-lrudict
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py-lxml
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py-lzstring
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py-macholib
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py-machotools
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py-macs2
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py-maestrowf
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py-mako
add commented test dependencies (#8407)
2018-06-07 10:33:59 -05:00
py-mappy
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py-markdown
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py-markupsafe
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py-matplotlib
add commented test dependencies (#8407)
2018-06-07 10:33:59 -05:00
py-mccabe
add commented test dependencies (#8407)
2018-06-07 10:33:59 -05:00
py-mdanalysis
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py-meep
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py-memory-profiler
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py-methylcode
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py-mg-rast-tools
Add top-level attributes for git M-P packages
2018-07-25 23:10:10 -07:00
py-misopy
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py-mistune
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py-mock
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py-moltemplate
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py-mongo
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py-monotonic
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py-monty
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py-more-itertools
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py-mpi4py
Add top-level attributes for git M-P packages
2018-07-25 23:10:10 -07:00
py-mpmath
py-mpmath: added version 1.0.0 (#8382)
2018-06-06 07:59:53 -05:00
py-multiprocess
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py-multiqc
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py-mx
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py-mxnet
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py-myhdl
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py-mysqldb1
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py-natsort
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py-nbconvert
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py-nbformat
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py-neo
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py-nestle
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py-netcdf4
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py-netifaces
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py-networkx
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py-nose
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py-nosexcover
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py-numba
Updated llvm to version 6.0.1. The previous 6.0.0 had an incorrectly … (#8801)
2018-07-26 17:47:18 -05:00
py-numexpr
update version for numexpr (#8702)
2018-07-13 15:50:21 -05:00
py-numexpr3
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py-numpy
py-numpy: Add CPATH in modulefile (#8466)
2018-07-26 17:50:00 -05:00
py-numpydoc
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py-olefile
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py-ont-fast5-api
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py-openpmd-validator
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py-openpyxl
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py-openslide-python
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py-opentuner
Add top-level attributes for git M-P packages
2018-07-25 23:10:10 -07:00
py-ordereddict
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py-oset
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py-owslib
add package py-cartopy and dependencies (#8406)
2018-06-07 08:10:39 -05:00
py-packaging
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py-palettable
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py-pandas
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py-paramiko
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py-partd
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py-pathlib2
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py-pathos
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py-pathspec
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py-patsy
add commented test dependencies (#8407)
2018-06-07 10:33:59 -05:00
py-pbr
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py-pep8-naming
add py-pep8-naming package
2018-07-19 00:41:36 -07:00
py-perf
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py-performance
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py-periodictable
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py-petsc4py
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py-pexpect
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py-phonopy
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py-pickleshare
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py-pil
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py-pillow
Updating py-pillow with change in checksum for version 5.1.0. (#8547)
2018-06-22 18:02:27 -05:00
py-pip
Added py-pip 10.0.1 and py-setuptools 39.2.0 (#8377)
2018-06-05 13:36:09 -05:00
py-pipits
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py-pkgconfig
py-pkgconfig: Made nose dependency type=build,test instead of just type=test, to prevent setuptools from silently installing its own copy of nose (#8749)
2018-07-18 21:42:04 -05:00
py-plotly
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py-pluggy
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py-ply
py-ply: added version 3.11 (#8383)
2018-07-11 22:21:55 +02:00
py-pmw
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py-poster
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py-pox
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py-ppft
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py-prettytable
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py-proj
Add top-level attributes for git M-P packages
2018-07-25 23:10:10 -07:00
py-projectq
Add top-level attributes for git M-P packages
2018-07-25 23:10:10 -07:00
py-prompt-toolkit
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py-protobuf
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py-psutil
modified: var/spack/repos/builtin/packages/py-psutil/package.py (#8420)
2018-06-07 10:26:48 -05:00
py-psyclone
Add top-level attributes for git M-P packages
2018-07-25 23:10:10 -07:00
py-ptyprocess
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py-pudb
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py-py
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py-py2bit
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py-py2cairo
add commented test dependencies (#8407)
2018-06-07 10:33:59 -05:00
py-py2neo
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py-py4j
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py-pyani
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py-pyasn1
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py-pybedtools
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py-pybigwig
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py-pybind11
Add top-level attributes for git M-P packages
2018-07-25 23:10:10 -07:00
py-pybtex
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py-pybtex-docutils
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py-pychecker
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py-pycodestyle
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py-pycparser
pycparser: add version 2.18 (#8760)
2018-07-19 12:49:05 -05:00
py-pycrypto
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py-pycurl
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py-pydatalog
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py-pydispatcher
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py-pydot
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py-pyelftools
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py-pyepsg
add package py-cartopy and dependencies (#8406)
2018-06-07 08:10:39 -05:00
py-pyfaidx
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py-pyfasta
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py-pyfftw
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py-pyflakes
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py-pygdbmi
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py-pygments
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py-pygobject
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py-pygpu
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py-pygtk
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py-pylint
Further improvements to version parsing
2018-07-25 23:10:10 -07:00
py-pymatgen
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py-pyminifier
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py-pymol
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py-pympler
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py-pynn
Add top-level attributes for git M-P packages
2018-07-25 23:10:10 -07:00
py-pypar
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py-pyparsing
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py-pypeflow
Add top-level attributes for git M-P packages
2018-07-25 23:10:10 -07:00
py-pyprof2html
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py-pyqi
py-pyqi: new package (#8726)
2018-07-17 16:07:38 -05:00
py-pyqt
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py-pyrad
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py-pysam
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py-pyscaf
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py-pyserial
Fix base class for py-pyserial (#8633)
2018-07-02 22:47:56 -05:00
py-pyshp
add package py-cartopy and dependencies (#8406)
2018-06-07 08:10:39 -05:00
py-pyside
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py-pysocks
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py-pysqlite
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py-pytables
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py-pytest
modified: var/spack/repos/builtin/packages/py-pytest/package.py (#8890)
2018-08-06 09:21:49 -05:00
py-pytest-cov
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py-pytest-flake8
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py-pytest-httpbin
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py-pytest-mock
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py-pytest-runner
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py-pytest-xdist
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py-python-daemon
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py-python-engineio
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py-python-gitlab
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py-python-levenshtein
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py-python-socketio
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py-pythonqwt
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py-pytorch
Add top-level attributes for git M-P packages
2018-07-25 23:10:10 -07:00
py-pytz
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py-pyutilib
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py-pyvcf
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py-pywavelets
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py-pyyaml
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py-qtawesome
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py-qtconsole
add commented test dependencies (#8407)
2018-06-07 10:33:59 -05:00
py-qtpy
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py-quantities
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py-quast
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py-radical-utils
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py-ranger
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py-rasterio
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py-readme-renderer
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py-regex
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py-reportlab
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py-requests
add commented test dependencies (#8407)
2018-06-07 10:33:59 -05:00
py-requests-toolbelt
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py-restview
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py-rope
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py-rpy2
added rpy2 2.9.4 and added py-jinja2 dependency (#8645)
2018-07-05 21:33:32 -05:00
py-rsa
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py-rseqc
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py-rtree
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py-saga-python
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py-scandir
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py-scientificpython
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py-scikit-image
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py-scikit-learn
py-scikit-learn: added version 0.19.1 and updated dependencies (#8399)
2018-06-06 07:41:48 -05:00
py-scipy
Remove unnecessary version-specific URL overrides (#8693)
2018-07-12 07:28:11 +02:00
py-seaborn
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py-setuptools
Added py-pip 10.0.1 and py-setuptools 39.2.0 (#8377)
2018-06-05 13:36:09 -05:00
py-setuptools-git
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py-setuptools-scm
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py-sfepy
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py-sh
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py-shapely
add package py-cartopy and dependencies (#8406)
2018-06-07 08:10:39 -05:00
py-shiboken
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py-simplegeneric
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py-simplejson
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py-singledispatch
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py-sip
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py-six
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py-slepc4py
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py-slurm-pipeline
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py-sncosmo
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py-snowballstemmer
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py-snuggs
py-snuggs: Added depends_on py-parsing. The build uses setuptools, which would otherwise silently try to install pyparsing itself, presumably into the python home dir (obviously not ideal). (#8748)
2018-07-18 21:42:57 -05:00
py-spectra
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py-spefile
Add top-level attributes for git M-P packages
2018-07-25 23:10:10 -07:00
py-spglib
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py-sphinx
add commented test dependencies (#8407)
2018-06-07 10:33:59 -05:00
py-sphinx-bootstrap-theme
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py-sphinx-rtd-theme
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py-sphinxcontrib-bibtex
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py-sphinxcontrib-programoutput
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py-sphinxcontrib-websupport
add commented test dependencies (#8407)
2018-06-07 10:33:59 -05:00
py-spyder
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py-spykeutils
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py-sqlalchemy
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py-statsmodels
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py-stevedore
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py-storm
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py-subprocess32
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py-symengine
Replace git=git with explicit branch names
2018-07-25 23:10:10 -07:00
py-symfit
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py-sympy
py-sympy: added version 1.1.1 (#8381)
2018-06-05 13:42:18 -05:00
py-tabulate
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py-tappy
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py-terminado
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py-testinfra
py-testinfra: Add versions 1.12.0 and 1.13.0 (#8222)
2018-05-21 15:57:25 -05:00
py-tetoolkit
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py-theano
Add top-level attributes for git M-P packages
2018-07-25 23:10:10 -07:00
py-tifffile
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py-toml
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py-tomopy
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py-toolz
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py-tornado
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py-tqdm
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py-traceback2
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py-traitlets
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py-tuiview
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py-twisted
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py-typing
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py-tzlocal
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py-udunits
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py-umi-tools
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py-unittest2
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py-unittest2py3k
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py-urllib3
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py-urwid
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py-vcversioner
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py-virtualenv
py-virtualenv: added version 16.0.0 (#8380)
2018-06-05 13:35:43 -05:00
py-virtualenv-clone
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py-virtualenvwrapper
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py-vmd-python
added py-setuptools as dependency (#8843)
2018-08-02 11:24:26 -05:00
py-vsc-base
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py-vsc-install
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py-wcsaxes
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py-wcwidth
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py-webkit-server
Add top-level attributes for git M-P packages
2018-07-25 23:10:10 -07:00
py-weblogo
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py-werkzeug
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py-wheel
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py-widgetsnbextension
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py-wrapt
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py-xarray
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py-xattr
Add top-level attributes for git M-P packages
2018-07-25 23:10:10 -07:00
py-xlrd
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py-xlsxwriter
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py-xmlrunner
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py-xopen
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py-xpyb
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py-xvfbwrapper
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py-yamlreader
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py-yapf
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py-yt
Add top-level attributes for git M-P packages
2018-07-25 23:10:10 -07:00
py-zmq
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py-zope-event
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py-zope-interface
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python
Add Python 3.7.0 (#8619)
2018-06-29 16:25:39 -05:00
qbank
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qbox
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qhull
…
qmcpack
Add top-level attributes for git M-P packages
2018-07-25 23:10:10 -07:00
qmd-progress
Add top-level attributes for git M-P packages
2018-07-25 23:10:10 -07:00
qorts
r-qorts: Create new package. (#8744)
2018-07-19 17:58:36 -05:00
qrupdate
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qt
fix qt@5.8: build on systems without wayland (#8417)
2018-06-07 10:50:05 -05:00
qt-creator
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qtgraph
Add top-level attributes for git M-P packages
2018-07-25 23:10:10 -07:00
qthreads
…
quantum-espresso
Further improvements to version parsing
2018-07-25 23:10:10 -07:00
quinoa
Add top-level attributes for git M-P packages
2018-07-25 23:10:10 -07:00
qwt
…
r
Bump R to v3.5.1. (#8895)
2018-08-06 11:16:27 -05:00
r-a4
Add top-level attributes for git R (Bioconductor) packages
2018-07-25 23:10:10 -07:00
r-a4base
Add top-level attributes for git R (Bioconductor) packages
2018-07-25 23:10:10 -07:00
r-a4classif
Add top-level attributes for git R (Bioconductor) packages
2018-07-25 23:10:10 -07:00
r-a4core
Add top-level attributes for git R (Bioconductor) packages
2018-07-25 23:10:10 -07:00
r-a4preproc
Add top-level attributes for git R (Bioconductor) packages
2018-07-25 23:10:10 -07:00
r-a4reporting
Add top-level attributes for git R (Bioconductor) packages
2018-07-25 23:10:10 -07:00
r-abadata
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r-abaenrichment
Add top-level attributes for git R (Bioconductor) packages
2018-07-25 23:10:10 -07:00
r-abind
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r-absseq
Add top-level attributes for git R (Bioconductor) packages
2018-07-25 23:10:10 -07:00
r-acde
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r-acepack
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r-acgh
Add top-level attributes for git R (Bioconductor) packages
2018-07-25 23:10:10 -07:00
r-acme
Add top-level attributes for git R (Bioconductor) packages
2018-07-25 23:10:10 -07:00
r-ada
…
r-adabag
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r-ade4
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r-adegenet
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r-adsplit
Add top-level attributes for git R (Bioconductor) packages
2018-07-25 23:10:10 -07:00
r-aer
r-aer: a new package. (#8567)
2018-06-28 15:40:00 -05:00
r-affxparser
Add top-level attributes for git R (Bioconductor) packages
2018-07-25 23:10:10 -07:00
r-affy
Add top-level attributes for git R (Bioconductor) packages
2018-07-25 23:10:10 -07:00
r-affycomp
Add top-level attributes for git R (Bioconductor) packages
2018-07-25 23:10:10 -07:00
r-affycompatible
Add top-level attributes for git R (Bioconductor) packages
2018-07-25 23:10:10 -07:00
r-affycontam
Add top-level attributes for git R (Bioconductor) packages
2018-07-25 23:10:10 -07:00
r-affycoretools
Add top-level attributes for git R (Bioconductor) packages
2018-07-25 23:10:10 -07:00
r-affydata
…
r-affyexpress
Add top-level attributes for git R (Bioconductor) packages
2018-07-25 23:10:10 -07:00
r-affyilm
Add top-level attributes for git R (Bioconductor) packages
2018-07-25 23:10:10 -07:00
r-affyio
Add top-level attributes for git R (Bioconductor) packages
2018-07-25 23:10:10 -07:00
r-affypdnn
Add top-level attributes for git R (Bioconductor) packages
2018-07-25 23:10:10 -07:00
r-affyplm
Add top-level attributes for git R (Bioconductor) packages
2018-07-25 23:10:10 -07:00
r-affyqcreport
Add top-level attributes for git R (Bioconductor) packages
2018-07-25 23:10:10 -07:00
r-affyrnadegradation
Add top-level attributes for git R (Bioconductor) packages
2018-07-25 23:10:10 -07:00
r-agdex
Add top-level attributes for git R (Bioconductor) packages
2018-07-25 23:10:10 -07:00
r-agilp
Add top-level attributes for git R (Bioconductor) packages
2018-07-25 23:10:10 -07:00
r-agimicrorna
Add top-level attributes for git R (Bioconductor) packages
2018-07-25 23:10:10 -07:00
r-aims
Add top-level attributes for git R (Bioconductor) packages
2018-07-25 23:10:10 -07:00
r-aldex2
Add top-level attributes for git R (Bioconductor) packages
2018-07-25 23:10:10 -07:00
r-allelicimbalance
Add top-level attributes for git R (Bioconductor) packages
2018-07-25 23:10:10 -07:00
r-alpine
Add top-level attributes for git R (Bioconductor) packages
2018-07-25 23:10:10 -07:00
r-als
…
r-alsace
Add top-level attributes for git R (Bioconductor) packages
2018-07-25 23:10:10 -07:00
r-altcdfenvs
Add top-level attributes for git R (Bioconductor) packages
2018-07-25 23:10:10 -07:00
r-ampliqueso
Add top-level attributes for git R (Bioconductor) packages
2018-07-25 23:10:10 -07:00
r-analysispageserver
Add top-level attributes for git R (Bioconductor) packages
2018-07-25 23:10:10 -07:00
r-anaquin
Add top-level attributes for git R (Bioconductor) packages
2018-07-25 23:10:10 -07:00
r-aneufinder
Add top-level attributes for git R (Bioconductor) packages
2018-07-25 23:10:10 -07:00
r-aneufinderdata
Add top-level attributes for git R (Bioconductor) packages
2018-07-25 23:10:10 -07:00
r-annaffy
Add top-level attributes for git R (Bioconductor) packages
2018-07-25 23:10:10 -07:00
r-annotate
Add top-level attributes for git R (Bioconductor) packages
2018-07-25 23:10:10 -07:00
r-annotationdbi
Add top-level attributes for git R (Bioconductor) packages
2018-07-25 23:10:10 -07:00
r-annotationfilter
Add top-level attributes for git R (Bioconductor) packages
2018-07-25 23:10:10 -07:00
r-annotationforge
Add top-level attributes for git R (Bioconductor) packages
2018-07-25 23:10:10 -07:00
r-annotationhub
Add top-level attributes for git R (Bioconductor) packages
2018-07-25 23:10:10 -07:00
r-ape
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r-assertthat
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r-backports
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r-bamsignals
Add top-level attributes for git R (Bioconductor) packages
2018-07-25 23:10:10 -07:00
r-base64
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r-base64enc
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r-bbmisc
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r-beanplot
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r-bh
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r-bindr
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r-bindrcpp
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r-biobase
Add top-level attributes for git R (Bioconductor) packages
2018-07-25 23:10:10 -07:00
r-biocgenerics
Add top-level attributes for git R (Bioconductor) packages
2018-07-25 23:10:10 -07:00
r-biocinstaller
Add top-level attributes for git R (Bioconductor) packages
2018-07-25 23:10:10 -07:00
r-biocparallel
Add top-level attributes for git R (Bioconductor) packages
2018-07-25 23:10:10 -07:00
r-biocstyle
Add top-level attributes for git R (Bioconductor) packages
2018-07-25 23:10:10 -07:00
r-biom-utils
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r-biomart
Add top-level attributes for git R (Bioconductor) packages
2018-07-25 23:10:10 -07:00
r-biomformat
Add top-level attributes for git R (Bioconductor) packages
2018-07-25 23:10:10 -07:00
r-biostrings
Add top-level attributes for git R (Bioconductor) packages
2018-07-25 23:10:10 -07:00
r-biovizbase
Add top-level attributes for git R (Bioconductor) packages
2018-07-25 23:10:10 -07:00
r-bit
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r-bit64
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r-bitops
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r-blob
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r-bookdown
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r-boot
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r-brew
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r-broom
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r-bsgenome
Add top-level attributes for git R (Bioconductor) packages
2018-07-25 23:10:10 -07:00
r-bumphunter
Add top-level attributes for git R (Bioconductor) packages
2018-07-25 23:10:10 -07:00
r-c50
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r-callr
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r-car
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r-caret
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r-category
Add top-level attributes for git R (Bioconductor) packages
2018-07-25 23:10:10 -07:00
r-catools
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r-cdcfluview
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r-cellranger
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r-cghflasso
r-cghflasso v0 2 1 - new package (#8177)
2018-05-21 16:12:35 -05:00
r-checkmate
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r-checkpoint
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r-chemometrics
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r-chron
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r-circlize
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r-class
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r-classint
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r-cli
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r-clipr
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r-cluster
Further improvements to version parsing
2018-07-25 23:10:10 -07:00
r-clusterprofiler
Add top-level attributes for git R (Bioconductor) packages
2018-07-25 23:10:10 -07:00
r-cner
Add top-level attributes for git R (Bioconductor) packages
2018-07-25 23:10:10 -07:00
r-coda
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r-codetools
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r-coin
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r-colorspace
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r-complexheatmap
Add top-level attributes for git R (Bioconductor) packages
2018-07-25 23:10:10 -07:00
r-corpcor
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r-corrplot
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r-covr
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r-cowplot
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r-crayon
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r-crosstalk
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r-cubature
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r-cubist
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r-curl
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r-data-table
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r-dbi
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r-dbplyr
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r-delayedarray
Add top-level attributes for git R (Bioconductor) packages
2018-07-25 23:10:10 -07:00
r-deldir
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r-dendextend
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r-deoptim
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r-deoptimr
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r-deseq
Add top-level attributes for git R (Bioconductor) packages
2018-07-25 23:10:10 -07:00
r-deseq2
Add top-level attributes for git R (Bioconductor) packages
2018-07-25 23:10:10 -07:00
r-desolve
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r-devtools
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r-diagrammer
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r-dicekriging
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r-dichromat
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r-diffusionmap
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r-digest
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r-diptest
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r-dirichletmultinomial
Add top-level attributes for git R (Bioconductor) packages
2018-07-25 23:10:10 -07:00
r-dismo
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r-dnacopy
Add top-level attributes for git R (Bioconductor) packages
2018-07-25 23:10:10 -07:00
r-do-db
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r-domc
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r-doparallel
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r-dorng
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r-dose
Add top-level attributes for git R (Bioconductor) packages
2018-07-25 23:10:10 -07:00
r-downloader
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r-dplyr
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r-dt
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r-dtw
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r-dygraphs
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r-e1071
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r-edger
Add top-level attributes for git R (Bioconductor) packages
2018-07-25 23:10:10 -07:00
r-ellipse
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r-ensembldb
Add top-level attributes for git R (Bioconductor) packages
2018-07-25 23:10:10 -07:00
r-ergm
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r-evaluate
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r-expm
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r-factoextra
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r-factominer
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r-fastmatch
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r-ff
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r-fftwtools
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r-fgsea
Add top-level attributes for git R (Bioconductor) packages
2018-07-25 23:10:10 -07:00
r-filehash
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r-fit-models
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r-flashclust
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r-flexclust
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r-flexmix
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r-fnn
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r-forcats
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r-foreach
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r-forecast
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r-foreign
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r-formatr
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r-formula
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r-fpc
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r-fracdiff
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r-futile-logger
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r-futile-options
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r-gbm
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r-gcrma
Add top-level attributes for git R (Bioconductor) packages
2018-07-25 23:10:10 -07:00
r-gdata
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r-gdsfmt
Add top-level attributes for git R (Bioconductor) packages
2018-07-25 23:10:10 -07:00
r-geiger
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r-genefilter
Add top-level attributes for git R (Bioconductor) packages
2018-07-25 23:10:10 -07:00
r-geneplotter
Add top-level attributes for git R (Bioconductor) packages
2018-07-25 23:10:10 -07:00
r-genie3
Add top-level attributes for git R (Bioconductor) packages
2018-07-25 23:10:10 -07:00
r-genomeinfodb
Add top-level attributes for git R (Bioconductor) packages
2018-07-25 23:10:10 -07:00
r-genomeinfodbdata
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r-genomicalignments
Add top-level attributes for git R (Bioconductor) packages
2018-07-25 23:10:10 -07:00
r-genomicfeatures
Add top-level attributes for git R (Bioconductor) packages
2018-07-25 23:10:10 -07:00
r-genomicranges
Add top-level attributes for git R (Bioconductor) packages
2018-07-25 23:10:10 -07:00
r-geomorph
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r-geoquery
Add top-level attributes for git R (Bioconductor) packages
2018-07-25 23:10:10 -07:00
r-geosphere
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r-getopt
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r-getoptlong
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r-ggally
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r-ggbio
Add top-level attributes for git R (Bioconductor) packages
2018-07-25 23:10:10 -07:00
r-ggdendro
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r-ggjoy
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r-ggmap
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r-ggplot2
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r-ggpubr
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r-ggsci
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r-git2r
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r-globaloptions
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r-glue
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r-gmodels
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r-gmp
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r-go-db
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r-googlevis
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r-gosemsim
Add top-level attributes for git R (Bioconductor) packages
2018-07-25 23:10:10 -07:00
r-gostats
Add top-level attributes for git R (Bioconductor) packages
2018-07-25 23:10:10 -07:00
r-gplots
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r-graph
Add top-level attributes for git R (Bioconductor) packages
2018-07-25 23:10:10 -07:00
r-gridbase
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r-gridextra
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r-gseabase
Add top-level attributes for git R (Bioconductor) packages
2018-07-25 23:10:10 -07:00
r-gss
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r-gsubfn
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r-gtable
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r-gtools
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r-gtrellis
Add top-level attributes for git R (Bioconductor) packages
2018-07-25 23:10:10 -07:00
r-gviz
Add top-level attributes for git R (Bioconductor) packages
2018-07-25 23:10:10 -07:00
r-haven
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r-hexbin
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r-highr
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r-hmisc
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r-hms
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r-htmltable
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r-htmltools
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r-htmlwidgets
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r-httpuv
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r-httr
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r-hwriter
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r-hypergraph
Add top-level attributes for git R (Bioconductor) packages
2018-07-25 23:10:10 -07:00
r-ica
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r-igraph
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r-illuminaio
Add top-level attributes for git R (Bioconductor) packages
2018-07-25 23:10:10 -07:00
r-impute
Add top-level attributes for git R (Bioconductor) packages
2018-07-25 23:10:10 -07:00
r-influencer
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r-inline
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r-interactivedisplaybase
Add top-level attributes for git R (Bioconductor) packages
2018-07-25 23:10:10 -07:00
r-ipred
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r-iranges
Add top-level attributes for git R (Bioconductor) packages
2018-07-25 23:10:10 -07:00
r-irdisplay
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r-irkernel
Add top-level attributes for git R (Bioconductor) packages
2018-07-25 23:10:10 -07:00
r-irlba
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r-iso
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r-iterators
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r-janitor
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r-jaspar2018
Add top-level attributes for git R (Bioconductor) packages
2018-07-25 23:10:10 -07:00
r-jomo
r-mitml: new package and its dependencies r-jomo and r-pan (#8412)
2018-06-06 17:44:32 -05:00
r-jpeg
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r-jsonlite
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r-kegg-db
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r-kegggraph
Add top-level attributes for git R (Bioconductor) packages
2018-07-25 23:10:10 -07:00
r-keggrest
Add top-level attributes for git R (Bioconductor) packages
2018-07-25 23:10:10 -07:00
r-kernlab
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r-kernsmooth
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r-kknn
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r-knitr
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r-labeling
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r-lambda-r
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r-laplacesdemon
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r-lars
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r-lattice
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r-latticeextra
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r-lava
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r-lazyeval
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r-leaflet
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r-leaps
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r-learnbayes
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r-lhs
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r-limma
Add top-level attributes for git R (Bioconductor) packages
2018-07-25 23:10:10 -07:00
r-lme4
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r-lmtest
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r-locfit
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r-log4r
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r-lpsolve
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r-lsei
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r-lubridate
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r-magic
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r-magrittr
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r-makecdfenv
Add top-level attributes for git R (Bioconductor) packages
2018-07-25 23:10:10 -07:00
r-maldiquant
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r-mapproj
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r-maps
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r-maptools
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r-markdown
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r-mass
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r-matr
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r-matrix
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r-matrixmodels
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r-matrixstats
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r-mclust
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r-mcmcglmm
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r-mco
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r-mda
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r-memoise
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r-mergemaid
Add top-level attributes for git R (Bioconductor) packages
2018-07-25 23:10:10 -07:00
r-methodss3
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r-mgcv
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r-mgraster
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r-mice
r-mice: new package (#8423)
2018-06-08 14:48:54 -05:00
r-mime
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r-minfi
Add top-level attributes for git R (Bioconductor) packages
2018-07-25 23:10:10 -07:00
r-minqa
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r-misc3d
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r-mitml
r-mitml: new package and its dependencies r-jomo and r-pan (#8412)
2018-06-06 17:44:32 -05:00
r-mixtools
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r-mlbench
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r-mlinterfaces
Add top-level attributes for git R (Bioconductor) packages
2018-07-25 23:10:10 -07:00
r-mlr
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r-mlrmbo
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r-mmwrweek
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r-mnormt
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r-modelmetrics
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r-modelr
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r-modeltools
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r-mpm
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r-msnbase
Add top-level attributes for git R (Bioconductor) packages
2018-07-25 23:10:10 -07:00
r-multcomp
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r-multtest
Add top-level attributes for git R (Bioconductor) packages
2018-07-25 23:10:10 -07:00
r-munsell
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r-mvtnorm
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r-mzid
Add top-level attributes for git R (Bioconductor) packages
2018-07-25 23:10:10 -07:00
r-mzr
Add top-level attributes for git R (Bioconductor) packages
2018-07-25 23:10:10 -07:00
r-nanotime
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r-ncbit
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r-ncdf4
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r-network
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r-networkd3
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r-nlme
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r-nloptr
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r-nmf
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r-nnet
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r-nnls
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r-nor1mix
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r-np
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r-numderiv
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r-oligoclasses
Add top-level attributes for git R (Bioconductor) packages
2018-07-25 23:10:10 -07:00
r-oo
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r-openssl
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r-org-hs-eg-db
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r-organismdbi
Add top-level attributes for git R (Bioconductor) packages
2018-07-25 23:10:10 -07:00
r-packrat
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r-pacman
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r-pamr
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r-pan
r-mitml: new package and its dependencies r-jomo and r-pan (#8412)
2018-06-06 17:44:32 -05:00
r-parallelmap
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r-paramhelpers
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r-party
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r-partykit
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r-pathview
Add top-level attributes for git R (Bioconductor) packages
2018-07-25 23:10:10 -07:00
r-pbapply
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r-pbdzmq
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r-pbkrtest
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r-pcamethods
Add top-level attributes for git R (Bioconductor) packages
2018-07-25 23:10:10 -07:00
r-pcapp
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r-permute
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r-pfam-db
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r-phangorn
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r-phantompeakqualtools
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r-phyloseq
Add top-level attributes for git R (Bioconductor) packages
2018-07-25 23:10:10 -07:00
r-picante
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r-pkgconfig
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r-pkgmaker
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r-plogr
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r-plot3d
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r-plotly
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r-plotrix
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r-pls
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r-plyr
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r-pmcmr
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r-png
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r-powerlaw
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r-prabclus
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r-praise
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r-preprocesscore
Add top-level attributes for git R (Bioconductor) packages
2018-07-25 23:10:10 -07:00
r-prettyunits
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r-proc
r-proc v1 12 1 - New package (#8191)
2018-05-19 11:26:44 -05:00
r-prodlim
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r-progress
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r-protgenerics
Add top-level attributes for git R (Bioconductor) packages
2018-07-25 23:10:10 -07:00
r-proto
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r-proxy
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r-pryr
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r-psych
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r-ptw
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r-purrr
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r-quadprog
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r-quantmod
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r-quantreg
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r-quantro
Add top-level attributes for git R (Bioconductor) packages
2018-07-25 23:10:10 -07:00
r-qvalue
Add top-level attributes for git R (Bioconductor) packages
2018-07-25 23:10:10 -07:00
r-r6
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r-randomforest
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r-ranger
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r-rappdirs
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r-raster
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r-rbgl
Add top-level attributes for git R (Bioconductor) packages
2018-07-25 23:10:10 -07:00
r-rbokeh
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r-rcolorbrewer
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r-rcpp
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r-rcpparmadillo
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r-rcppblaze
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r-rcppcctz
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r-rcppcnpy
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r-rcppeigen
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r-rcppprogress
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r-rcurl
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r-rda
Further improvements to version parsing
2018-07-25 23:10:10 -07:00
r-readr
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r-readxl
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r-registry
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r-rematch
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r-reordercluster
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r-reportingtools
Add top-level attributes for git R (Bioconductor) packages
2018-07-25 23:10:10 -07:00
r-repr
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r-reprex
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r-reshape
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r-reshape2
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r-rex
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r-rgdal
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r-rgenoud
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r-rgeos
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r-rgl
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r-rgooglemaps
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r-rgraphviz
Add top-level attributes for git R (Bioconductor) packages
2018-07-25 23:10:10 -07:00
r-rhdf5
Add top-level attributes for git R (Bioconductor) packages
2018-07-25 23:10:10 -07:00
r-rhtslib
Replace git=git with explicit branch names
2018-07-25 23:10:10 -07:00
r-rinside
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r-rjags
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r-rjava
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r-rjson
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r-rjsonio
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r-rlang
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r-rmarkdown
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r-rminer
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r-rmpfr
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r-rmpi
style: bring packages in compliance with pep8-naming
2018-07-19 00:41:36 -07:00
r-rmysql
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r-rngtools
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r-robustbase
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r-rocr
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r-rodbc
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r-roxygen2
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r-rpart
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r-rpart-plot
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r-rpostgresql
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r-rprojroot
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r-rsamtools
Add top-level attributes for git R (Bioconductor) packages
2018-07-25 23:10:10 -07:00
r-rsnns
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r-rsolnp
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r-rsqlite
Further improvements to version parsing
2018-07-25 23:10:10 -07:00
r-rstan
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r-rstudioapi
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r-rtracklayer
Add top-level attributes for git R (Bioconductor) packages
2018-07-25 23:10:10 -07:00
r-rtsne
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r-rvcheck
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r-rvest
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r-rzmq
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r-s4vectors
Add top-level attributes for git R (Bioconductor) packages
2018-07-25 23:10:10 -07:00
r-samr
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r-sandwich
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r-scales
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r-scatterplot3d
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r-sdmtools
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r-segmented
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r-selectr
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r-seqinr
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r-seqlogo
Add top-level attributes for git R (Bioconductor) packages
2018-07-25 23:10:10 -07:00
r-seurat
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r-sf
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r-sfsmisc
Further improvements to version parsing
2018-07-25 23:10:10 -07:00
r-shape
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r-shiny
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r-shinydashboard
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r-shortread
Add top-level attributes for git R (Bioconductor) packages
2018-07-25 23:10:10 -07:00
r-siggenes
Add top-level attributes for git R (Bioconductor) packages
2018-07-25 23:10:10 -07:00
r-simpleaffy
Add top-level attributes for git R (Bioconductor) packages
2018-07-25 23:10:10 -07:00
r-smoof
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r-sn
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r-snow
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r-snowfall
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r-snprelate
Add top-level attributes for git R (Bioconductor) packages
2018-07-25 23:10:10 -07:00
r-som
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r-somaticsignatures
Add top-level attributes for git R (Bioconductor) packages
2018-07-25 23:10:10 -07:00
r-sourcetools
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r-sp
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r-sparsem
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r-spatial
Further improvements to version parsing
2018-07-25 23:10:10 -07:00
r-spdep
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r-speedglm
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r-spem
Add top-level attributes for git R (Bioconductor) packages
2018-07-25 23:10:10 -07:00
r-splitstackshape
r-splitstackshape: Create new package. (#8370)
2018-06-06 08:03:23 -05:00
r-sqldf
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r-squash
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r-stanheaders
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r-statmod
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r-statnet-common
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r-stringi
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r-stringr
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r-strucchange
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r-subplex
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r-summarizedexperiment
Add top-level attributes for git R (Bioconductor) packages
2018-07-25 23:10:10 -07:00
r-survey
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r-survival
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r-sva
Add top-level attributes for git R (Bioconductor) packages
2018-07-25 23:10:10 -07:00
r-tarifx
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r-tclust
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r-tensora
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r-testit
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r-testthat
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r-tfbstools
Add top-level attributes for git R (Bioconductor) packages
2018-07-25 23:10:10 -07:00
r-tfmpvalue
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r-th-data
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r-threejs
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r-tibble
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r-tidycensus
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r-tidyr
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r-tidyselect
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r-tidyverse
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r-tiff
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r-tigris
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r-timedate
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r-tmixclust
Add top-level attributes for git R (Bioconductor) packages
2018-07-25 23:10:10 -07:00
r-topgo
Add top-level attributes for git R (Bioconductor) packages
2018-07-25 23:10:10 -07:00
r-trimcluster
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r-truncnorm
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r-trust
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r-tseries
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r-tsne
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r-ttr
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r-udunits2
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r-units
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r-utf8
r-utf8 v1.1.3 - New package (#8206)
2018-05-19 16:23:03 -05:00
r-utils
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r-uuid
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r-variantannotation
Add top-level attributes for git R (Bioconductor) packages
2018-07-25 23:10:10 -07:00
r-varselrf
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r-vcd
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r-vegan
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r-vgam
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r-vipor
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r-viridis
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r-viridislite
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r-visnetwork
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r-vsn
Add top-level attributes for git R (Bioconductor) packages
2018-07-25 23:10:10 -07:00
r-whisker
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r-withr
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r-xde
Add top-level attributes for git R (Bioconductor) packages
2018-07-25 23:10:10 -07:00
r-xgboost
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r-xlconnect
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r-xlconnectjars
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r-xlsx
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r-xlsxjars
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r-xmapbridge
Add top-level attributes for git R (Bioconductor) packages
2018-07-25 23:10:10 -07:00
r-xml
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r-xml2
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r-xtable
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r-xts
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r-xvector
Add top-level attributes for git R (Bioconductor) packages
2018-07-25 23:10:10 -07:00
r-yaml
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r-yapsa
Add top-level attributes for git R (Bioconductor) packages
2018-07-25 23:10:10 -07:00
r-yaqcaffy
Add top-level attributes for git R (Bioconductor) packages
2018-07-25 23:10:10 -07:00
r-yarn
Add top-level attributes for git R (Bioconductor) packages
2018-07-25 23:10:10 -07:00
r-zlibbioc
Add top-level attributes for git R (Bioconductor) packages
2018-07-25 23:10:10 -07:00
r-zoo
…
racon
…
raft
Replace git=git with explicit branch names
2018-07-25 23:10:10 -07:00
ragel
…
raja
Add top-level attributes for git R-Z packages
2018-07-25 23:10:10 -07:00
randfold
…
random123
…
randrproto
…
rankstr
ECP VELOC Package update (#8910)
2018-08-08 21:40:38 -04:00
rapidjson
…
ravel
…
raxml
…
ray
…
rdma-core
…
rdp-classifier
…
re2c
…
readfq
Add top-level attributes for git R-Z packages
2018-07-25 23:10:10 -07:00
readline
…
recordproto
…
redset
ECP VELOC Package update (#8910)
2018-08-08 21:40:38 -04:00
redundans
…
relion
Add top-level attributes for git R-Z packages
2018-07-25 23:10:10 -07:00
rempi
added ReMPI version 1.1.0 (#8548)
2018-06-22 17:03:41 -05:00
rename
…
rendercheck
…
renderproto
…
repeatmasker
repeatmasker: fix bin location and dependency (#8286)
2018-05-25 18:22:25 -05:00
resourceproto
…
revbayes
…
rgb
…
rhash
…
rlwrap
…
rmlab
Add top-level attributes for git R-Z packages
2018-07-25 23:10:10 -07:00
rna-seqc
…
rngstreams
Add new package: rngstreams (#8395)
2018-06-06 12:10:56 -05:00
rockstar
Further improvements to version parsing
2018-07-25 23:10:10 -07:00
root
…
rose
Add top-level attributes for git R-Z packages
2018-07-25 23:10:10 -07:00
rr
add commented test dependencies (#8407)
2018-06-07 10:33:59 -05:00
rsbench
…
rsem
…
rstart
…
rsync
…
rtags
…
rtax
…
ruby
Add url_for_version and list_url to Ruby package (#8216)
2018-07-06 07:22:38 -05:00
ruby-gnuplot
…
ruby-narray
All git URLs end in .git
2018-07-25 23:10:10 -07:00
ruby-ronn
…
ruby-rubyinline
…
ruby-svn2git
…
ruby-terminal-table
…
rust
Add top-level attributes for git R-Z packages
2018-07-25 23:10:10 -07:00
rust-bindgen
…
sabre
Add top-level attributes for git R-Z packages
2018-07-25 23:10:10 -07:00
sailfish
Further improvements to version parsing
2018-07-25 23:10:10 -07:00
salmon
…
sambamba
Add top-level attributes for git R-Z packages
2018-07-25 23:10:10 -07:00
samblaster
…
samrai
samrai: update package for 3.12.0 and fix compilation bugs for earlier versions (#8501)
2018-06-18 13:52:24 -05:00
samtools
…
sandbox
…
sas
…
satsuma2
Add top-level attributes for git R-Z packages
2018-07-25 23:10:10 -07:00
savanna
Add top-level attributes for git R-Z packages
2018-07-25 23:10:10 -07:00
saws
Add top-level attributes for git R-Z packages
2018-07-25 23:10:10 -07:00
sbt
Bump sbt to 1.1.6. (#8634)
2018-07-03 10:03:49 -05:00
scala
…
scalasca
…
scalpel
…
scan-for-matches
…
scons
…
scorec-core
Add top-level attributes for git R-Z packages
2018-07-25 23:10:10 -07:00
scorep
…
scotch
Scotch: update package (#8711)
2018-07-15 15:54:28 -05:00
scr
Add top-level attributes for git R-Z packages
2018-07-25 23:10:10 -07:00
screen
screen: update package (#8630)
2018-07-02 16:03:22 -05:00
scripts
…
scrnsaverproto
…
sctk
…
sdl2
…
sdl2-image
…
sed
…
seqan
…
seqprep
…
seqtk
…
serf
…
sessreg
…
setxkbmap
…
sga
…
shapeit
…
shared-mime-info
…
shiny-server
…
shocklibs
…
shoremap
…
shortbred
…
shortstack
…
showfont
…
shuffile
ECP VELOC Package update (#8910)
2018-08-08 21:40:38 -04:00
sickle
…
siesta
…
signalp
…
signify
…
silo
silo: Make silo use AutotoolsPackage (#8551)
2018-06-22 17:19:03 -05:00
simplemoc
simplemoc: version bump (#8884)
2018-08-03 14:31:06 -05:00
simul
…
simulationio
Add top-level attributes for git R-Z packages
2018-07-25 23:10:10 -07:00
singularity
Add top-level attributes for git R-Z packages
2018-07-25 23:10:10 -07:00
sleef
sleef: a new library. (#8198)
2018-05-19 11:26:31 -05:00
slepc
slepc: add blopex variant (#8820)
2018-07-30 18:18:36 -05:00
slurm
…
smalt
…
smproxy
…
snakemake
…
snap
Add top-level attributes for git R-Z packages
2018-07-25 23:10:10 -07:00
snap-berkeley
…
snap-korf
…
snappy
Parquet: new packages (#8601)
2018-07-04 07:24:38 -05:00
snbone
Add top-level attributes for git R-Z packages
2018-07-25 23:10:10 -07:00
sniffles
…
snpeff
…
snphylo
…
snptest
…
soap2
…
soapdenovo2
…
soapdenovo-trans
…
soapindel
…
soapsnp
…
sofa-c
…
somatic-sniper
…
sortmerna
Add top-level attributes for git R-Z packages
2018-07-25 23:10:10 -07:00
sosflow
Add top-level attributes for git R-Z packages
2018-07-25 23:10:10 -07:00
sowing
sowing: update to version used by current petsc -i.e 1.1.25-p1 (#8561)
2018-06-24 17:02:39 -05:00
sox
…
spades
…
spark
…
sparsehash
…
sparta
…
spdlog
…
spectrum-mpi
Further improvements to version parsing
2018-07-25 23:10:10 -07:00
speex
…
spglib
…
sph2pipe
…
spherepack
…
spindle
…
spot
…
sqlite
add sqlitebrowser (#8418)
2018-06-07 11:34:29 -05:00
sqlitebrowser
add sqlitebrowser (#8418)
2018-06-07 11:34:29 -05:00
squid
…
sra-toolkit
…
sspace-longread
…
sspace-standard
…
sst-dumpi
Add top-level attributes for git R-Z packages
2018-07-25 23:10:10 -07:00
sst-macro
Add top-level attributes for git R-Z packages
2018-07-25 23:10:10 -07:00
stacks
…
staden-io-lib
…
star
Remove unnecessary version-specific URL overrides (#8693)
2018-07-12 07:28:11 +02:00
star-ccm-plus
…
startup-notification
…
stat
…
stc
…
stow
…
strace
…
stream
Add top-level attributes for git R-Z packages
2018-07-25 23:10:10 -07:00
strelka
…
stress
…
stringtie
…
structure
…
sublime-text
Adjusted sublime-text package (#8685)
2018-07-11 12:41:48 -05:00
subread
subread: use compiler wrappers when compiling (#8328)
2018-06-01 10:30:47 +02:00
subversion
…
suite-sparse
suite-sparse: add version 5.3.0 (#8837)
2018-08-02 07:25:57 +02:00
sumaclust
…
sundials
…
superlu
…
superlu-dist
superlu_dist should be built with 'HAVE_PARMETIS=TRUE'. (#8917)
2018-08-08 20:50:48 -04:00
superlu-mt
…
supernova
…
sw4lite
All git URLs end in .git
2018-07-25 23:10:10 -07:00
swap-assembler
…
swarm
…
swfft
All git URLs end in .git
2018-07-25 23:10:10 -07:00
swiftsim
…
swig
…
symengine
Replace git=git with explicit branch names
2018-07-25 23:10:10 -07:00
sympol
…
sz
sz: fix checksum for 2.0.2.0 (#8868)
2018-08-02 11:43:59 -05:00
tabix
Add top-level attributes for git R-Z packages
2018-07-25 23:10:10 -07:00
talloc
…
tantan
…
tar
…
targetp
…
task
task: Add version 2.5.1 (#8184)
2018-05-18 10:28:19 -05:00
taskd
…
tasmanian
added Tasmanian versions 5.1 and development, enabled the Tasmanian options through +~ flags (#8804)
2018-07-27 10:10:32 -05:00
tassel
Add top-level attributes for git R-Z packages
2018-07-25 23:10:10 -07:00
tau
Add new versions for TAU and PDT package (#8497)
2018-06-17 17:21:00 -05:00
tcl
tcl package: Install sources (#8153)
2018-06-08 11:10:40 -07:00
tcl-itcl
Add package tcl-itcl (#8578)
2018-06-27 10:05:00 -05:00
tcl-tcllib
…
tcl-tclxml
…
tclap
…
tcoffee
Add top-level attributes for git R-Z packages
2018-07-25 23:10:10 -07:00
tcptrace
style: bring packages in compliance with pep8-naming
2018-07-19 00:41:36 -07:00
tcsh
style: bring packages in compliance with pep8-naming
2018-07-19 00:41:36 -07:00
tealeaf
…
templight
Templight package (#8782)
2018-07-26 11:19:14 -05:00
templight-tools
Templight package (#8782)
2018-07-26 11:19:14 -05:00
tetgen
…
tethex
Replace git=git with explicit branch names
2018-07-25 23:10:10 -07:00
texinfo
…
texlive
…
the-platinum-searcher
Add docs on new top-level VCS attributes
2018-07-25 23:10:10 -07:00
the-silver-searcher
…
thrift
Parquet: new packages (#8601)
2018-07-04 07:24:38 -05:00
thrust
…
tig
…
tinyxml
…
tinyxml2
…
tioga
Add top-level attributes for git R-Z packages
2018-07-25 23:10:10 -07:00
tk
…
tmalign
…
tmhmm
…
tmux
…
tmuxinator
Add top-level attributes for git R-Z packages
2018-07-25 23:10:10 -07:00
tophat
Add Tophat v2.1.2, fixes automake issues (#8266)
2018-05-24 20:04:03 -05:00
tppred
…
transabyss
…
transdecoder
transdecoder: needs perl-uri-escape (#8690)
2018-07-11 17:38:58 -05:00
transposome
…
transset
…
trapproto
…
tree
…
trf
trf: make executable (#8265)
2018-05-24 10:47:17 -05:00
triangle
…
trilinos
Trilinos: Update rules for superlu-dist version compatibility. (#8851)
2018-08-02 11:25:30 -05:00
trimgalore
trimgalore: Use perl from env (#8318)
2018-05-30 12:31:05 -05:00
trimmomatic
…
trinity
Trinity plugins (#8516)
2018-07-22 17:17:44 -05:00
trnascan-se
…
turbine
…
turbomole
…
tut
…
twm
…
tycho2
Add top-level attributes for git R-Z packages
2018-07-25 23:10:10 -07:00
typhon
Unit test fixes
2018-07-25 23:10:10 -07:00
typhonio
Add top-level attributes for git R-Z packages
2018-07-25 23:10:10 -07:00
uberftp
…
ucx
…
udunits2
…
ufo-core
…
ufo-filters
…
umpire
Add top-level attributes for git R-Z packages
2018-07-25 23:10:10 -07:00
unblur
…
uncrustify
Added support for uncrustify 0.67. (#8655)
2018-07-06 19:59:34 -05:00
unibilium
…
unison
…
units
…
unixodbc
…
unuran
Add new package: unuran (#8397)
2018-06-11 08:41:32 -05:00
unzip
…
usearch
…
util-linux
…
util-macros
…
uuid
…
valgrind
Replace git=git with explicit branch names
2018-07-25 23:10:10 -07:00
vampirtrace
…
vardictjava
…
varscan
…
vc
…
vcftools
…
vcsh
…
vdt
…
vecgeom
…
veclibfort
Replace git=git with explicit branch names
2018-07-25 23:10:10 -07:00
vegas2
…
veloc
ECP VELOC Package update (#8910)
2018-08-08 21:40:38 -04:00
velvet
…
verilator
style: bring packages in compliance with pep8-naming
2018-07-19 00:41:36 -07:00
verrou
Add top-level attributes for git R-Z packages
2018-07-25 23:10:10 -07:00
videoproto
…
viennarna
…
viewres
…
vim
Added vim 8.1 (#8185)
2018-05-18 12:07:05 -05:00
virtualgl
…
visit
…
vizglow
…
vmatch
…
voropp
…
votca-csg
Add top-level attributes for git R-Z packages
2018-07-25 23:10:10 -07:00
votca-ctp
Add top-level attributes for git R-Z packages
2018-07-25 23:10:10 -07:00
votca-tools
Add top-level attributes for git R-Z packages
2018-07-25 23:10:10 -07:00
votca-xtp
Further improvements to version parsing
2018-07-25 23:10:10 -07:00
vpfft
Add top-level attributes for git R-Z packages
2018-07-25 23:10:10 -07:00
vpic
Add top-level attributes for git R-Z packages
2018-07-25 23:10:10 -07:00
vsearch
…
vt
…
vtk
style: bring packages in compliance with pep8-naming
2018-07-19 00:41:36 -07:00
vtkh
Add top-level attributes for git R-Z packages
2018-07-25 23:10:10 -07:00
vtkm
Add top-level attributes for git R-Z packages
2018-07-25 23:10:10 -07:00
wannier90
…
wcslib
Add missing dependencies and variants to wcslib (#8603)
2018-07-05 21:36:29 -05:00
wget
add commented test dependencies (#8407)
2018-06-07 10:33:59 -05:00
wgsim
Add top-level attributes for git R-Z packages
2018-07-25 23:10:10 -07:00
windowswmproto
…
wireshark
Replace pkg-config dependencies with virtual (#8783)
2018-08-02 13:29:04 -04:00
workrave
new packages: workrave and its dependencies (#7753)
2018-06-21 18:25:26 -07:00
wt
Add top-level attributes for git R-Z packages
2018-07-25 23:10:10 -07:00
wx
Add top-level attributes for git R-Z packages
2018-07-25 23:10:10 -07:00
wxpropgrid
…
x11perf
…
xapian-core
…
xauth
…
xbacklight
…
xbiff
…
xbitmaps
…
xbraid
…
xcalc
…
xcb-demo
…
xcb-proto
…
xcb-util
…
xcb-util-cursor
…
xcb-util-errors
…
xcb-util-image
…
xcb-util-keysyms
…
xcb-util-renderutil
…
xcb-util-wm
…
xcb-util-xrm
Add top-level attributes for git R-Z packages
2018-07-25 23:10:10 -07:00
xclip
Add top-level attributes for git R-Z packages
2018-07-25 23:10:10 -07:00
xclipboard
…
xclock
…
xcmiscproto
…
xcmsdb
…
xcompmgr
…
xconsole
…
xcursor-themes
…
xcursorgen
…
xdbedizzy
…
xditview
…
xdm
…
xdpyinfo
…
xdriinfo
…
xedit
…
xerces-c
Add Xerces-C++ 3.2.1 (#8208)
2018-05-20 15:04:06 -05:00
xev
…
xextproto
…
xeyes
…
xf86bigfontproto
…
xf86dga
…
xf86dgaproto
…
xf86driproto
…
xf86miscproto
…
xf86rushproto
…
xf86vidmodeproto
…
xfd
…
xfindproxy
…
xfontsel
…
xfs
…
xfsinfo
…
xfwp
…
xgamma
…
xgc
…
xhmm
Add top-level attributes for git R-Z packages
2018-07-25 23:10:10 -07:00
xhost
…
xineramaproto
…
xinit
…
xinput
…
xios
Add top-level attributes for hg, svn, and git A-L packages
2018-07-25 23:10:10 -07:00
xkbcomp
…
xkbdata
…
xkbevd
…
xkbprint
…
xkbutils
…
xkeyboard-config
…
xkill
…
xload
…
xlogo
…
xlsatoms
…
xlsclients
…
xlsfonts
…
xmag
…
xman
…
xmessage
…
xmh
…
xmlf90
…
xmlto
…
xmodmap
…
xmore
…
xorg-cf-files
…
xorg-docs
…
xorg-gtest
…
xorg-server
…
xorg-sgml-doctools
…
xphelloworld
…
xplor-nih
…
xplsprinters
…
xpr
…
xprehashprinterlist
…
xprop
…
xproto
…
xproxymanagementprotocol
…
xqilla
…
xrandr
…
xrdb
…
xrefresh
…
xrootd
…
xrx
…
xsbench
…
xscope
…
xsd
new package: XSD (#8784)
2018-08-02 16:28:19 -04:00
xsdk
Balay/petsc remove boost dependency (#8508)
2018-06-24 10:52:14 -05:00
xsdktrilinos
Add top-level attributes for git R-Z packages
2018-07-25 23:10:10 -07:00
xset
…
xsetmode
…
xsetpointer
…
xsetroot
…
xsimd
Add top-level attributes for git R-Z packages
2018-07-25 23:10:10 -07:00
xsm
…
xstdcmap
…
xtensor
Add top-level attributes for git R-Z packages
2018-07-25 23:10:10 -07:00
xtensor-python
Add top-level attributes for git R-Z packages
2018-07-25 23:10:10 -07:00
xterm
…
xtl
Add top-level attributes for git R-Z packages
2018-07-25 23:10:10 -07:00
xtrans
…
xtrap
…
xts
…
xvidtune
…
xvinfo
…
xwd
…
xwininfo
…
xwud
…
xxhash
New package xxhash. (#8530)
2018-06-20 13:51:53 -05:00
xz
Add xz 5.2.4 (#8202)
2018-05-20 15:01:33 -05:00
yajl
Add top-level attributes for git R-Z packages
2018-07-25 23:10:10 -07:00
yambo
Further improvements to version parsing
2018-07-25 23:10:10 -07:00
yaml-cpp
Add top-level attributes for git R-Z packages
2018-07-25 23:10:10 -07:00
yasm
Replace git=git with explicit branch names
2018-07-25 23:10:10 -07:00
yorick
Add top-level attributes for git R-Z packages
2018-07-25 23:10:10 -07:00
z3
…
zeromq
Add top-level attributes for git R-Z packages
2018-07-25 23:10:10 -07:00
zfp
…
zip
…
zlib
…
zoltan
zoltan: depends on metis.h and libmetis (#8583)
2018-06-26 23:29:22 -07:00
zsh
packages: do not use generic checksum= in version() directives
2018-07-23 11:57:52 -07:00
zstd
Parquet: new packages (#8601)
2018-07-04 07:24:38 -05:00