e51748ee8f
Introduces a new virtual zlib-api, which replaces zlib in most packages. This allows users to switch to zlib-ng by default for better performance.
29 lines
1.1 KiB
Python
29 lines
1.1 KiB
Python
# Copyright 2013-2023 Lawrence Livermore National Security, LLC and other
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# Spack Project Developers. See the top-level COPYRIGHT file for details.
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#
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# SPDX-License-Identifier: (Apache-2.0 OR MIT)
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from spack.package import *
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class Biobloom(AutotoolsPackage):
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"""BioBloom Tools (BBT) provides the means to create filters for a given
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reference and then to categorize sequences."""
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homepage = "https://github.com/bcgsc/biobloom"
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url = "https://github.com/bcgsc/biobloom/releases/download/2.2.0/biobloomtools-2.2.0.tar.gz"
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version("2.3.5", sha256="03fbc0d0fc867f76d64f756d556598e5fe5f015363df8f97fbed4cfd541c6749")
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version("2.2.0", sha256="5d09f8690f0b6402f967ac09c5b0f769961f3fe3791000f8f73af6af7324f02c")
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depends_on("boost+exception+math+serialization+container")
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depends_on("sdsl-lite")
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depends_on("sparsehash")
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depends_on("zlib-api")
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def configure_args(self):
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# newer versions of sdsl-lite introduce tolerable warnings
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# they must disabled to allow the build to continue
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return ["CXXFLAGS=-w", "CPPFLAGS=-w"]
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