35 lines
1.5 KiB
Python
35 lines
1.5 KiB
Python
# Copyright 2013-2020 Lawrence Livermore National Security, LLC and other
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# Spack Project Developers. See the top-level COPYRIGHT file for details.
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#
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# SPDX-License-Identifier: (Apache-2.0 OR MIT)
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from spack import *
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class RGtrellis(RPackage):
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"""Genome Level Trellis Layout.
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Genome level Trellis graph visualizes genomic data conditioned by
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genomic categories (e.g. chromosomes). For each genomic category,
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multiple dimensional data which are represented as tracks describe
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different features from different aspects. This package provides high
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flexibility to arrange genomic categories and to add self-defined
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graphics in the plot."""
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homepage = "https://bioconductor.org/packages/gtrellis"
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git = "https://git.bioconductor.org/packages/gtrellis.git"
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version('1.16.1', commit='a9003ededc8f2a48c78d4545e2f214023c13a7da')
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version('1.14.0', commit='93935fb34211d12b250e22291712e18a31b0208d')
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version('1.12.1', commit='7f3941adddbbfa17f4cf474b703568678a38272d')
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version('1.11.1', commit='ff47d99743fd697d5c724f7bb18131dfe76dee71')
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version('1.8.0', commit='f813b420a008c459f63a2a13e5e64c5507c4c472')
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depends_on('r@3.1.2:', type=('build', 'run'))
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depends_on('r-iranges', type=('build', 'run'))
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depends_on('r-genomicranges', type=('build', 'run'))
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depends_on('r-circlize@0.3.3:', type=('build', 'run'))
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depends_on('r-getoptlong', type=('build', 'run'))
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depends_on('r-circlize@0.4.8:', when='@1.16.1', type=('build', 'run'))
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