eea786f4e8
- remove the old LGPL license headers from all files in Spack - add SPDX headers to all files - core and most packages are (Apache-2.0 OR MIT) - a very small number of remaining packages are LGPL-2.1-only
25 lines
1.0 KiB
Python
25 lines
1.0 KiB
Python
# Copyright 2013-2018 Lawrence Livermore National Security, LLC and other
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# Spack Project Developers. See the top-level COPYRIGHT file for details.
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#
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# SPDX-License-Identifier: (Apache-2.0 OR MIT)
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from spack import *
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class RAffxparser(RPackage):
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"""Package for parsing Affymetrix files (CDF, CEL, CHP, BPMAP, BAR).
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It provides methods for fast and memory efficient parsing of
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Affymetrix files using the Affymetrix' Fusion SDK. Both ASCII-
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and binary-based files are supported. Currently, there are methods
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for reading chip definition file (CDF) and a cell intensity file (CEL).
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These files can be read either in full or in part. For example,
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probe signals from a few probesets can be extracted very quickly
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from a set of CEL files into a convenient list structure."""
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homepage = "https://www.bioconductor.org/packages/affxparser/"
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git = "https://git.bioconductor.org/packages/affxparser.git"
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version('1.48.0', commit='2461ea88f310b59c4a9a997a4b3dadedbd65a4aa')
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depends_on('r@3.4.0:3.4.9', when='@1.48.0')
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