spack/lib/spack/docs/config_yaml.rst
Tamara Dahlgren 1ef71376f2 Bugfix: stage directory permissions and cleaning (#12733)
* This updates stage names to use "spack-stage-" as a prefix.
  This avoids removing non-Spack directories in "spack clean" as
  c141e99 did (in this case so long as they don't contain the
  prefix "spack-stage-"), and also addresses a follow-up issue
  where Spack stage directories were not removed.
* Spack now does more-stringent checking of expected permissions for
  staging directories. For a given stage root that includes a user
  component, all directories before the user component that are
  created by Spack are expected to match the permissions of their
  parent; the user component and all deeper directories are expected
  to be accessible to the user (read/write/execute).
2019-10-16 14:55:37 -07:00

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.. Copyright 2013-2019 Lawrence Livermore National Security, LLC and other
Spack Project Developers. See the top-level COPYRIGHT file for details.
SPDX-License-Identifier: (Apache-2.0 OR MIT)
.. _config-yaml:
==============
Basic Settings
==============
Spack's basic configuration options are set in ``config.yaml``. You can
see the default settings by looking at
``etc/spack/defaults/config.yaml``:
.. literalinclude:: _spack_root/etc/spack/defaults/config.yaml
:language: yaml
These settings can be overridden in ``etc/spack/config.yaml`` or
``~/.spack/config.yaml``. See :ref:`configuration-scopes` for details.
--------------------
``install_tree``
--------------------
The location where Spack will install packages and their dependencies.
Default is ``$spack/opt/spack``.
---------------------------------------------------
``install_hash_length`` and ``install_path_scheme``
---------------------------------------------------
The default Spack installation path can be very long and can create
problems for scripts with hardcoded shebangs. There are two parameters
to help with that. Firstly, the ``install_hash_length`` parameter can
set the length of the hash in the installation path from 1 to 32. The
default path uses the full 32 characters.
Secondly, it is also possible to modify the entire installation
scheme. By default Spack uses
``{architecture}/{compiler.name}-{compiler.version}/{name}-{version}-{hash}``
where the tokens that are available for use in this directive are the
same as those understood by the :meth:`~spack.spec.Spec.format`
method. Using this parameter it is possible to use a different package
layout or reduce the depth of the installation paths. For example
.. code-block:: yaml
config:
install_path_scheme: '{name}/{version}/{hash:7}'
would install packages into sub-directories using only the package
name, version and a hash length of 7 characters.
When using either parameter to set the hash length it only affects the
representation of the hash in the installation directory. You
should be aware that the smaller the hash length the more likely
naming conflicts will occur. These parameters are independent of those
used to configure module names.
.. warning:: Modifying the installation hash length or path scheme after
packages have been installed will prevent Spack from being
able to find the old installation directories.
--------------------
``module_roots``
--------------------
Controls where Spack installs generated module files. You can customize
the location for each type of module. e.g.:
.. code-block:: yaml
module_roots:
tcl: $spack/share/spack/modules
lmod: $spack/share/spack/lmod
See :ref:`modules` for details.
--------------------
``build_stage``
--------------------
Spack is designed to run out of a user home directory, and on many
systems the home directory is a (slow) network file system. On most systems,
building in a temporary file system is faster. Usually, there is also more
space available in the temporary location than in the home directory. If the
username is not already in the path, Spack will append the value of ``$user`` to
the selected ``build_stage`` path.
.. warning:: We highly recommend specifying ``build_stage`` paths that
distinguish between staging and other activities to ensure
``spack clean`` does not inadvertently remove unrelated files.
Spack prepends ``spack-stage-`` to temporary staging directory names to
reduce this risk. Using a combination of ``spack`` and or ``stage`` in
each specified path, as shown in the default settings and documented
examples, will add another layer of protection.
By default, Spack's ``build_stage`` is configured like this:
.. code-block:: yaml
build_stage:
- $tempdir/$user/spack-stage
- ~/.spack/stage
This can be an ordered list of paths that Spack should search when trying to
find a temporary directory for the build stage. The list is searched in
order, and Spack will use the first directory to which it has write access.
Specifying `~/.spack/stage` first will ensure each user builds in their home
directory. The historic Spack stage path `$spack/var/spack/stage` will build
directly inside the Spack instance. See :ref:`config-file-variables` for more
on ``$tempdir`` and ``$spack``.
When Spack builds a package, it creates a temporary directory within the
``build_stage``. After the package is successfully installed, Spack deletes
the temporary directory it used to build. Unsuccessful builds are not
deleted, but you can manually purge them with :ref:`spack clean --stage
<cmd-spack-clean>`.
.. note::
The build will fail if there is no writable directory in the ``build_stage``
list, where any user- and site-specific setting will be searched first.
--------------------
``source_cache``
--------------------
Location to cache downloaded tarballs and repositories. By default these
are stored in ``$spack/var/spack/cache``. These are stored indefinitely
by default. Can be purged with :ref:`spack clean --downloads
<cmd-spack-clean>`.
--------------------
``misc_cache``
--------------------
Temporary directory to store long-lived cache files, such as indices of
packages available in repositories. Defaults to ``~/.spack/cache``. Can
be purged with :ref:`spack clean --misc-cache <cmd-spack-clean>`.
--------------------
``verify_ssl``
--------------------
When set to ``true`` (default) Spack will verify certificates of remote
hosts when making ``ssl`` connections. Set to ``false`` to disable, and
tools like ``curl`` will use their ``--insecure`` options. Disabling
this can expose you to attacks. Use at your own risk.
--------------------
``checksum``
--------------------
When set to ``true``, Spack verifies downloaded source code using a
checksum, and will refuse to build packages that it cannot verify. Set
to ``false`` to disable these checks. Disabling this can expose you to
attacks. Use at your own risk.
--------------------
``locks``
--------------------
When set to ``true``, concurrent instances of Spack will use locks to
avoid modifying the install tree, database file, etc. If false, Spack
will disable all locking, but you must **not** run concurrent instances
of Spack. For file systems that don't support locking, you should set
this to ``false`` and run one Spack at a time, but otherwise we recommend
enabling locks.
--------------------
``dirty``
--------------------
By default, Spack unsets variables in your environment that can change
the way packages build. This includes ``LD_LIBRARY_PATH``, ``CPATH``,
``LIBRARY_PATH``, ``DYLD_LIBRARY_PATH``, and others.
By default, builds are ``clean``, but on some machines, compilers and
other tools may need custom ``LD_LIBRARY_PATH`` settings to run. You can
set ``dirty`` to ``true`` to skip the cleaning step and make all builds
"dirty" by default. Be aware that this will reduce the reproducibility
of builds.
.. _build-jobs:
--------------
``build_jobs``
--------------
Unless overridden in a package or on the command line, Spack builds all
packages in parallel. The default parallelism is equal to the number of
cores on your machine, up to 16. Parallelism cannot exceed the number of
cores available on the host. For a build system that uses Makefiles, this
means running:
- ``make -j<build_jobs>``, when ``build_jobs`` is less than the number of
cores on the machine
- ``make -j<ncores>``, when ``build_jobs`` is greater or equal to the
number of cores on the machine
If you work on a shared login node or have a strict ulimit, it may be
necessary to set the default to a lower value. By setting ``build_jobs``
to 4, for example, commands like ``spack install`` will run ``make -j4``
instead of hogging every core.
To build all software in serial, set ``build_jobs`` to 1.
--------------------
``ccache``
--------------------
When set to ``true`` Spack will use ccache to cache compiles. This is
useful specifically in two cases: (1) when using ``spack setup``, and (2)
when building the same package with many different variants. The default is
``false``.
When enabled, Spack will look inside your ``PATH`` for a ``ccache``
executable and stop if it is not found. Some systems come with
``ccache``, but it can also be installed using ``spack install
ccache``. ``ccache`` comes with reasonable defaults for cache size
and location. (See the *Configuration settings* section of ``man
ccache`` to learn more about the default settings and how to change
them). Please note that we currently disable ccache's ``hash_dir``
feature to avoid an issue with the stage directory (see
https://github.com/LLNL/spack/pull/3761#issuecomment-294352232).