31 lines
1.2 KiB
Python
31 lines
1.2 KiB
Python
# Copyright 2013-2022 Lawrence Livermore National Security, LLC and other
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# Spack Project Developers. See the top-level COPYRIGHT file for details.
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#
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# SPDX-License-Identifier: (Apache-2.0 OR MIT)
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from spack.package import *
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class PyGtdbtk(PythonPackage):
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"""GTDB-Tk is a software toolkit for assigning objective taxonomic
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classifications to bacterial and archaeal genomes based on the Genome
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Database Taxonomy (GTDB)."""
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homepage = "https://github.com/Ecogenomics/GTDBTk"
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pypi = "gtdbtk/gtdbtk-2.1.0.tar.gz"
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version("2.1.0", sha256="980885141f13502afdf05e720871427e3de4fe27f4f3f97e74af6fed87eb50a7")
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depends_on("python@3.6:", type=("build", "run"))
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depends_on("py-setuptools", type=("build"))
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depends_on("py-dendropy@4.1.0:", type=("build", "run"))
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depends_on("py-numpy@1.9.0:", type=("build", "run"))
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depends_on("py-tqdm@4.35.0:", type=("build", "run"))
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depends_on("prodigal@2.6.2:", type=("build", "run"))
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depends_on("hmmer@3.1b2:", type=("build", "run"))
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depends_on("pplacer@1.1:", type=("build", "run"))
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depends_on("fastani@1.32:", type=("build", "run"))
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depends_on("fasttree@2.1.9:", type=("build", "run"))
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depends_on("mash@2.2:", type=("build", "run"))
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