spack/var/spack/repos/spack_repo/builtin/packages/fastp/package.py
Harmen Stoppels b932c14008
builtin: use api v2.0 and update dir structure (#49275)
* Bump the package API of the `builtin` repo to `v2.0`
* Move `var/spack/repos/builtin` -> `var/spack/repos/spack_repo/builtin`
* Move test repos `var/spack/repos/{builtin.mock,tutorial,...}` -> `var/spack/test_repos/`
* Update package dir names to v2 format (`-` -> `_` etc)
* Change absolute imports `from spack.pkg.builtin.my_pkg ...` to relative imports `from ..my_pkg.package ...`

Users who have a repo on top of builtin should change imports from

```python
from spack.pkg.builtin.my_pkg import MyPkg
```

to

```python
from spack_repo.builtin.packages.my_pkg.package import MyPkg
```

and can configure their editors with

```
PYTHONPATH=$spack/lib/spack:$spack/var/spack/repos
```

[skip-verify-checksums]
2025-05-06 12:05:44 +02:00

29 lines
1003 B
Python

# Copyright Spack Project Developers. See COPYRIGHT file for details.
#
# SPDX-License-Identifier: (Apache-2.0 OR MIT)
from spack.package import *
class Fastp(MakefilePackage):
"""A tool designed to provide fast
all-in-one preprocessing for FastQ files."""
homepage = "https://github.com/OpenGene/fastp"
url = "https://github.com/OpenGene/fastp/archive/v0.20.0.tar.gz"
license("MIT")
version("0.23.4", sha256="4fad6db156e769d46071add8a778a13a5cb5186bc1e1a5f9b1ffd499d84d72b5")
version("0.23.3", sha256="a37ee4b5dcf836a5a19baec645657b71d9dcd69ee843998f41f921e9b67350e3")
version("0.20.0", sha256="8d751d2746db11ff233032fc49e3bcc8b53758dd4596fdcf4b4099a4d702ac22")
depends_on("cxx", type="build") # generated
depends_on("libisal", type=("build", "link"), when="@0.23:")
depends_on("libdeflate", type=("build", "link"), when="@0.23:")
def install(self, spec, prefix):
mkdirp(prefix.bin)
make("install", "PREFIX={0}".format(prefix))