eea786f4e8
- remove the old LGPL license headers from all files in Spack - add SPDX headers to all files - core and most packages are (Apache-2.0 OR MIT) - a very small number of remaining packages are LGPL-2.1-only
25 lines
959 B
Python
25 lines
959 B
Python
# Copyright 2013-2018 Lawrence Livermore National Security, LLC and other
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# Spack Project Developers. See the top-level COPYRIGHT file for details.
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#
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# SPDX-License-Identifier: (Apache-2.0 OR MIT)
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from spack import *
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class PyCheckmGenome(PythonPackage):
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"""Assess the quality of microbial genomes recovered from isolates, single
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cells, and metagenomes"""
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homepage = "https://ecogenomics.github.io/CheckM"
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url = "https://pypi.io/packages/source/c/checkm-genome/checkm-genome-1.0.11.tar.gz"
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version('1.0.11', '3058546ec324e2420cf72f0d2576114b')
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depends_on('hmmer@3.1b1:')
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depends_on('prodigal@2.6.1:')
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depends_on('py-numpy@1.8.0:', type=('build', 'run'))
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depends_on('py-scipy@0.9.0:', type=('build', 'run'))
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depends_on('py-matplotlib@1.3.1:', type=('build', 'run'))
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depends_on('py-pysam@0.8.3:', type=('build', 'run'))
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depends_on('py-dendropy@4.0.0:', type=('build', 'run'))
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