26 lines
880 B
Python
26 lines
880 B
Python
# Copyright 2013-2023 Lawrence Livermore National Security, LLC and other
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# Spack Project Developers. See the top-level COPYRIGHT file for details.
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#
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# SPDX-License-Identifier: (Apache-2.0 OR MIT)
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from spack.package import *
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class Fqtrim(MakefilePackage):
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"""fqtrim is a versatile stand-alone utility that can be used to trim
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adapters, poly-A tails, terminal unknown bases (Ns) and low quality 3'
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regions in reads from high-throughput next-generation sequencing
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machines."""
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homepage = "https://ccb.jhu.edu/software/fqtrim/"
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url = "https://ccb.jhu.edu/software/fqtrim/dl/fqtrim-0.9.7.tar.gz"
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version("0.9.7", sha256="4951538f69dde14a23fc4841ff020434d26eb9622c4e06b43c068c702aa3d0d6")
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def build(self, spec, prefix):
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make("release")
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def install(self, spec, prefix):
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mkdirp(prefix.bin)
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install("fqtrim", prefix.bin)
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