44 lines
1.9 KiB
Python
44 lines
1.9 KiB
Python
##############################################################################
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# Copyright (c) 2013-2017, Lawrence Livermore National Security, LLC.
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# Produced at the Lawrence Livermore National Laboratory.
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#
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# This file is part of Spack.
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# Created by Todd Gamblin, tgamblin@llnl.gov, All rights reserved.
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# LLNL-CODE-647188
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#
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# For details, see https://github.com/spack/spack
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# Please also see the NOTICE and LICENSE files for our notice and the LGPL.
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#
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# This program is free software; you can redistribute it and/or modify
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# it under the terms of the GNU Lesser General Public License (as
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# published by the Free Software Foundation) version 2.1, February 1999.
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#
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# This program is distributed in the hope that it will be useful, but
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# WITHOUT ANY WARRANTY; without even the IMPLIED WARRANTY OF
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# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the terms and
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# conditions of the GNU Lesser General Public License for more details.
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#
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# You should have received a copy of the GNU Lesser General Public
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# License along with this program; if not, write to the Free Software
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# Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
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##############################################################################
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from spack import *
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class Denovogear(CMakePackage):
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"""DeNovoGear is a software package to detect de novo mutations using
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next-generation sequencing data. It supports the analysis of many
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differential experimental designs and uses advanced statistical models
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to reduce the false positve rate."""
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homepage = "https://github.com/denovogear/denovogear"
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url = "https://github.com/denovogear/denovogear/archive/v1.1.1.tar.gz"
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version('1.1.1', 'da30e46851c3a774653e57f98fe62e5f')
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version('1.1.0', '7d441d56462efb7ff5d3a6f6bddfd8b9')
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depends_on('cmake@3.1:', type=('build'))
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depends_on('boost@1.47:1.60', type=('build'))
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depends_on('htslib@1.2:', type=('build'))
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depends_on('eigen', type=('build'))
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