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abinit
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abyss
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accfft
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ack
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activeharmony
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adept-utils
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adios
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ADIOS 1.13.1 & SZ 1.4.12.3 (#7808)
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2018-04-18 10:52:13 -05:00 |
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adios2
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Add Package: nlohmann_json (#7690)
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2018-04-07 11:00:00 -05:00 |
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adlbx
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adol-c
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adol-c: add boost optional dependency (#7905)
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2018-04-26 08:42:03 -05:00 |
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aegean
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Aegean: new package (#8113)
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2018-05-14 11:10:19 -05:00 |
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albert
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alglib
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allinea-forge
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allinea-reports
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allpaths-lg
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alquimia
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alsa-lib
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amg
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amg2013
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amp
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ampliconnoise
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amrex
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andi
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angsd
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ant
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antlr
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ants
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Add ANTs package (#7717)
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2018-04-11 14:22:23 -05:00 |
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ape
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apex
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applewmproto
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appres
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apr
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apr-util
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aragorn
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ARAGORN: Create new package (#7875)
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2018-04-23 16:51:42 -05:00 |
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archer
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argp-standalone
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argtable
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arlecore
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armadillo
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arpack-ng
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ascent
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asciidoc
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aspa
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aspcud
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aspell
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add patch to get aspell to build on OSX (#7919)
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2018-04-26 15:19:52 -05:00 |
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aspell6-de
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aspell6-en
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aspell6-es
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assimp
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astra
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astral
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astyle
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atk
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atlas
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atom-dft
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atompaw
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atop
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augustus
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autoconf
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autodock-vina
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autogen
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automaded
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automake
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Added the latest versions of a few packages (#7910)
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2018-04-26 14:46:45 +02:00 |
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bamtools
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bamutil
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barrnap
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bash
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bash-completion
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bats
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bazel
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bbcp
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bbmap
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bc
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bcftools
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Bump samtools, hstlib and bcftools to version 1.8. (#8020)
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2018-05-04 16:27:54 -05:00 |
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bcl2fastq2
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bcl2fastq2: package update (#7794)
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2018-04-18 10:11:44 -05:00 |
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bdftopcf
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bdw-gc
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bear
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beast1
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beast2
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bedops
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bedops: Create new package (#7956)
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2018-05-02 08:14:00 -05:00 |
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bedtools2
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beforelight
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benchmark
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Updates to Google Benchmark package: (#8056)
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2018-05-08 13:04:19 -05:00 |
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berkeley-db
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bertini
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bib2xhtml
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bigreqsproto
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binutils
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bioawk
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biopieces
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bismark
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bismark: Create new package (#7795)
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2018-04-17 14:45:10 -05:00 |
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bison
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bitmap
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blast-plus
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blat
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blaze
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bliss
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blitz
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bmake
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bml
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bohrium
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bookleaf-cpp
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Added BookLeaf_Cpp and Typhon packages. (#7969)
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2018-05-02 10:45:30 -05:00 |
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boost
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boost: added the +numpy variant which enables building libboost_numpy (#8104)
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2018-05-13 21:54:12 -05:00 |
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boostmplcartesianproduct
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bowtie
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bowtie2
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boxlib
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bpp-core
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bpp-phyl
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bpp-seq
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bpp-suite
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bracken
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braker
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branson
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breakdancer
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breseq
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brigand
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bsseeker2
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bucky
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bumpversion
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Add package for "bumpversion" (#8078)
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2018-05-12 18:37:10 -05:00 |
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busco
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Use GitLab's API endpoint for fetching a git snapshot. (#7881)
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2018-04-26 16:40:11 -05:00 |
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butter
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bwa
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byobu
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bzip2
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c-blosc
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c-lime
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Added C-Lime Package (#7707)
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2018-04-10 12:05:05 -05:00 |
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caffe
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cairo
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caliper
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callpath
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candle-benchmarks
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cantera
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canu
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cap3
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cares
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cask
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casper
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catalyst
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catch
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Catch2: make install (#7668)
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2018-04-07 10:36:10 +02:00 |
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cbench
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cblas
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cbtf
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Simple updates to the Krell Institute OpenSpeedShop and CBTF components build package files. (#7812)
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2018-04-18 14:05:53 -05:00 |
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cbtf-argonavis
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Simple updates to the Krell Institute OpenSpeedShop and CBTF components build package files. (#7812)
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2018-04-18 14:05:53 -05:00 |
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cbtf-argonavis-gui
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Simple updates to the Krell Institute OpenSpeedShop and CBTF components build package files. (#7812)
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2018-04-18 14:05:53 -05:00 |
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cbtf-krell
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Simple updates to the Krell Institute OpenSpeedShop and CBTF components build package files. (#7812)
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2018-04-18 14:05:53 -05:00 |
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cbtf-lanl
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ccache
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cctools
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cdbfasta
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cdd
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cddlib
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cdhit
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cdo
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ceed
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cereal
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cfitsio
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cgal
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cgm
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cgns
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charliecloud
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charliecloud: fix copyright (#8115)
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2018-05-14 11:09:57 -05:00 |
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charm
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check
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chlorop
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chombo
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cistem
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cityhash
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clamr
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cleaveland4
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cleverleaf
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clfft
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clhep
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clingo
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cloc
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cloog
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cloverleaf
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cloverleaf3d
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clustalo
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clustalw
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cmake
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cmake: update version (#7802)
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2018-04-17 17:26:03 -05:00 |
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cmocka
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cmor
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cnmem
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cnpy
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cntk
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cntk1bitsgd
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codar-cheetah
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coevp
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cohmm
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coinhsl
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colm
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New colm, ragel packages (#7867)
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2018-04-23 10:50:58 -05:00 |
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colordiff
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comd
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compiz
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compositeproto
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conduit
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constype
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converge
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coreutils
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corset
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cosmomc
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cosp2
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cp2k
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cppad
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cppcheck
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add variant htmlreport to package cppcheck (#7824)
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2018-04-21 10:26:37 -05:00 |
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cpprestsdk
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cppunit
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cppzmq
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cpu-features
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cpuinfo
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Add a new package: cpuinfo. (#7895)
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2018-04-25 10:04:45 -05:00 |
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cram
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cryptopp
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cscope
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csdp
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ctffind
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cub
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cube
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cuda
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cuda-memtest
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cudnn
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cufflinks
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cups
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curl
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self has no attribute named satisfies. (#7826)
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2018-04-19 12:43:12 -05:00 |
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cvs
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czmq
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dakota
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daligner
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damageproto
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damselfly
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darshan-runtime
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Darshan 3.1.6 (#7686)
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2018-04-06 16:49:07 -05:00 |
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darshan-util
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Darshan 3.1.6 (#7686)
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2018-04-06 16:49:07 -05:00 |
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dash
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datamash
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dataspaces
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dbus
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dealii
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dealii: another fix for quick tests only in 9.0 and thus hash (#8114)
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2018-05-14 11:07:19 -05:00 |
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deconseq-standalone
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dejagnu
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delly2
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denovogear
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dia
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dialign-tx
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diamond
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DIAMOND: Add version 0.9.20 (#7847)
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2018-04-21 09:57:06 -05:00 |
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diffsplice
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direnv
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discovar
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discovardenovo
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dislin
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shoremap: new package (#7343)
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2018-05-12 08:22:45 +02:00 |
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dlpack
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dmlc-core
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dmxproto
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docbook-xml
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docbook-xsl
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dos2unix
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double-conversion
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doxygen
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dri2proto
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dri3proto
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dsdp
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dsrc
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new package "DSRC" (bioinformatics) (#7680)
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2018-04-08 08:21:02 -05:00 |
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dtcmp
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dyninst
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ea-utils
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easybuild
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ebms
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eccodes
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ecp-proxy-apps
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ed
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editres
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eigen
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elemental
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elfutils
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elk
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elpa
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emacs
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emboss
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encodings
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environment-modules
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eospac
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Patch eospac package to allow compilation with %clang. (#7928)
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2018-04-29 18:40:27 -06:00 |
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es
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esmf
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espresso
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essl
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ethminer
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etsf-io
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everytrace
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Everytrace: update (#7995)
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2018-05-03 17:00:21 -05:00 |
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everytrace-example
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evieext
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exabayes
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examinimd
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exampm
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exasp2
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exmcutils
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exodusii
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exonerate
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expat
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expect
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express
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extrae
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exuberant-ctags
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f90cache
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fabtests
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fabtests: new package (#7837)
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2018-04-25 10:29:29 -05:00 |
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falcon
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farmhash
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fastjar
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fastmath
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fastme
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fastphase
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fastq-screen
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fastqc
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fastqvalidator
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fasttree
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fastx-toolkit
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fenics
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fermi
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fermi: Create new package. (#7702)
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2018-04-10 08:52:21 -05:00 |
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fermikit
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fermikit: new package (#7775)
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2018-04-16 15:54:05 -05:00 |
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ferret
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ffmpeg
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fftw
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fimpute
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findutils
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fio
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fish
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fixesproto
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flac
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flang
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flann
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flash
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flecsale
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flecsi
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flex
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flint
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flit
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fltk
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flux
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flux: changed default value for doc variant to False (#7749)
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2018-04-13 15:58:58 +02:00 |
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fluxbox
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fmt
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foam-extend
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folly
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font-adobe-75dpi
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font-adobe-100dpi
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font-adobe-utopia-75dpi
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font-adobe-utopia-100dpi
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font-adobe-utopia-type1
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font-alias
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font-arabic-misc
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font-bh-75dpi
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font-bh-100dpi
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font-bh-lucidatypewriter-75dpi
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font-bh-lucidatypewriter-100dpi
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font-bh-ttf
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font-bh-type1
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font-bitstream-75dpi
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font-bitstream-100dpi
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font-bitstream-speedo
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font-bitstream-type1
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font-cronyx-cyrillic
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font-cursor-misc
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font-daewoo-misc
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font-dec-misc
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font-ibm-type1
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font-isas-misc
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font-jis-misc
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font-micro-misc
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font-misc-cyrillic
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font-misc-ethiopic
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font-misc-meltho
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font-misc-misc
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font-mutt-misc
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font-schumacher-misc
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font-screen-cyrillic
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font-sony-misc
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font-sun-misc
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font-util
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font-winitzki-cyrillic
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font-xfree86-type1
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fontcacheproto
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fontconfig
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fontsproto
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fonttosfnt
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fp16
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Add a new package: fp16. (#7896)
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2018-04-25 07:30:07 -05:00 |
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fpc
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fr-hit
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freebayes
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freeglut
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freeglut: new package (#7820)
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2018-04-18 19:49:42 -05:00 |
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freetype
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freetype: adding subdir to cpath for deps (#7818)
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2018-04-19 09:00:49 -05:00 |
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fseq
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fsl
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fslsfonts
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fstobdf
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funhpc
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gapbs
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gapcloser
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gapfiller
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gasnet
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gatk
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Bump gatk version to 4.0.4.0. (#7985)
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2018-05-03 10:08:48 -05:00 |
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gaussian
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|
|
|
gawk
|
|
|
|
gblocks
|
|
|
|
gcc
|
macOS-specific patch no longer applies to GCC 8 (#8029)
|
2018-05-06 09:28:33 -05:00 |
|
gccmakedep
|
|
|
|
gccxml
|
|
|
|
gconf
|
|
|
|
gcta
|
|
|
|
gdal
|
gdal: update (#8008)
|
2018-05-03 22:55:31 -05:00 |
|
gdb
|
Add gdb@8.1; add optional lzma dependency for debug information support (#8068)
|
2018-05-08 21:08:39 -05:00 |
|
gdbm
|
Package 'gdbm': do not set CC. (#7912)
|
2018-04-26 08:44:17 -05:00 |
|
gdk-pixbuf
|
|
|
|
geant4
|
|
|
|
gearshifft
|
|
|
|
gemmlowp
|
|
|
|
genemark-et
|
|
|
|
genomefinisher
|
genomefinisher: Create new package (#7989)
|
2018-05-03 13:11:00 -05:00 |
|
genometools
|
Aegean: new package (#8113)
|
2018-05-14 11:10:19 -05:00 |
|
geopm
|
Package/geopm (#7560)
|
2018-04-17 07:51:56 -05:00 |
|
geos
|
|
|
|
gettext
|
|
|
|
gflags
|
|
|
|
ghost
|
|
|
|
ghostscript
|
|
|
|
ghostscript-fonts
|
|
|
|
giflib
|
|
|
|
git
|
Added the latest versions of a few packages (#7910)
|
2018-04-26 14:46:45 +02:00 |
|
git-imerge
|
|
|
|
git-lfs
|
|
|
|
gl2ps
|
|
|
|
glew
|
glew: adding gl dependency (#7817)
|
2018-04-18 17:58:45 -05:00 |
|
glfmultiples
|
|
|
|
glib
|
|
|
|
glimmer
|
|
|
|
glm
|
|
|
|
global
|
|
|
|
globalarrays
|
|
|
|
globus-toolkit
|
|
|
|
glog
|
|
|
|
gloo
|
Add a new package: gloo. (#7894)
|
2018-04-25 10:05:16 -05:00 |
|
glpk
|
|
|
|
glproto
|
|
|
|
glvis
|
glvis@3.3: new package (#7166)
|
2018-04-17 07:48:48 -05:00 |
|
gmake
|
|
|
|
gmap-gsnap
|
|
|
|
gmime
|
|
|
|
gmp
|
gmp: update (#7999)
|
2018-05-03 16:53:19 -05:00 |
|
gmsh
|
gmsh: add netgen and tetgen (#8060)
|
2018-05-11 14:22:12 +02:00 |
|
gnat
|
|
|
|
gnu-prolog
|
|
|
|
gnupg
|
|
|
|
gnuplot
|
gnuplot: add 5.2.2 (#7831)
|
2018-04-21 10:24:36 -05:00 |
|
gnutls
|
|
|
|
go
|
go: Update to 1.10.2 (#7982)
|
2018-05-03 12:14:52 +02:00 |
|
go-bootstrap
|
go: Update to 1.10.1 (#7708)
|
2018-04-10 14:41:52 -05:00 |
|
gobject-introspection
|
|
|
|
googletest
|
googletest: add variant to enable/disable threads (#8052)
|
2018-05-08 12:42:57 -05:00 |
|
gotcha
|
|
|
|
gource
|
|
|
|
gperf
|
|
|
|
gperftools
|
|
|
|
grackle
|
Add grackle 3.1 (#7805)
|
2018-04-18 07:23:09 -05:00 |
|
gradle
|
|
|
|
grandr
|
|
|
|
graph500
|
|
|
|
graphlib
|
|
|
|
graphmap
|
|
|
|
graphviz
|
|
|
|
grib-api
|
|
|
|
groff
|
|
|
|
gromacs
|
|
|
|
gsl
|
|
|
|
gslib
|
|
|
|
gtkorvo-atl
|
|
|
|
gtkorvo-cercs-env
|
|
|
|
gtkorvo-dill
|
|
|
|
gtkorvo-enet
|
|
|
|
gtkplus
|
|
|
|
gts
|
|
|
|
guidance
|
|
|
|
guile
|
|
|
|
gurobi
|
|
|
|
h5hut
|
|
|
|
h5part
|
|
|
|
h5utils
|
|
|
|
h5z-zfp
|
|
|
|
hacckernels
|
Use GitLab's API endpoint for fetching a git snapshot. (#7881)
|
2018-04-26 16:40:11 -05:00 |
|
hadoop
|
Added the latest versions of a few packages (#7910)
|
2018-04-26 14:46:45 +02:00 |
|
hapcut2
|
|
|
|
hapdip
|
hapdip: Create new package and its dependency k8. (#7685)
|
2018-04-06 15:40:58 -05:00 |
|
haploview
|
|
|
|
harfbuzz
|
|
|
|
harminv
|
|
|
|
hdf
|
|
|
|
hdf5
|
|
|
|
hdf5-blosc
|
|
|
|
help2man
|
|
|
|
hepmc
|
|
|
|
heppdt
|
|
|
|
hic-pro
|
Hic-Pro: fix a typo and replace hard-coded version. (#8022)
|
2018-05-04 10:56:04 -05:00 |
|
highfive
|
|
|
|
highwayhash
|
|
|
|
hiop
|
|
|
|
hisat2
|
|
|
|
hisea
|
hisea: new package (#8112)
|
2018-05-14 09:46:54 -05:00 |
|
hmmer
|
|
|
|
hoomd-blue
|
|
|
|
hpccg
|
|
|
|
hpctoolkit
|
|
|
|
hpctoolkit-externals
|
|
|
|
hpgmg
|
|
|
|
hpl
|
|
|
|
hpx
|
|
|
|
hpx5
|
|
|
|
hsakmt
|
|
|
|
hstr
|
|
|
|
htop
|
|
|
|
htslib
|
Bump samtools, hstlib and bcftools to version 1.8. (#8020)
|
2018-05-04 16:27:54 -05:00 |
|
httpie
|
|
|
|
hub
|
|
|
|
hunspell
|
|
|
|
hwloc
|
hwloc: add v 2.0.1 (#7724)
|
2018-04-10 20:20:09 -05:00 |
|
hybpiper
|
|
|
|
hydra
|
|
|
|
hypre
|
petsc and slepc: add 3.9.0; hypre: add 2.14 (needed by petsc) (#7877)
|
2018-04-24 07:10:46 -05:00 |
|
i3
|
|
|
|
ibmisc
|
|
|
|
iceauth
|
|
|
|
icedtea
|
|
|
|
icet
|
Use GitLab's API endpoint for fetching a git snapshot. (#7881)
|
2018-04-26 16:40:11 -05:00 |
|
ico
|
|
|
|
icu4c
|
|
|
|
id3lib
|
|
|
|
idba
|
|
|
|
igraph
|
|
|
|
igv
|
|
|
|
igvtools
|
|
|
|
ilmbase
|
|
|
|
image-magick
|
|
|
|
imake
|
|
|
|
imp
|
A new pacakge: IMP. (#7859)
|
2018-04-21 13:08:44 -05:00 |
|
impute2
|
|
|
|
infernal
|
|
|
|
inputproto
|
|
|
|
intel
|
|
|
|
intel-daal
|
|
|
|
intel-gpu-tools
|
|
|
|
intel-ipp
|
|
|
|
intel-mkl
|
|
|
|
intel-mkl-dnn
|
|
|
|
intel-mpi
|
|
|
|
intel-parallel-studio
|
|
|
|
intel-tbb
|
|
|
|
intel-xed
|
|
|
|
intltool
|
intltool requires patching for newer perl versions (#8061)
|
2018-05-08 17:53:50 -05:00 |
|
ior
|
|
|
|
iozone
|
|
|
|
ipopt
|
|
|
|
isaac
|
|
|
|
isaac-server
|
|
|
|
isl
|
|
|
|
itstool
|
|
|
|
itsx
|
|
|
|
jags
|
|
|
|
jansson
|
|
|
|
jasper
|
|
|
|
jbigkit
|
|
|
|
jchronoss
|
|
|
|
jdk
|
Added the latest versions of a few packages (#7910)
|
2018-04-26 14:46:45 +02:00 |
|
jellyfish
|
jellyfish: fixing url for v2 package retrieval (#7849)
|
2018-04-21 09:56:38 -05:00 |
|
jemalloc
|
|
|
|
jmol
|
|
|
|
jq
|
|
|
|
json-c
|
|
|
|
json-cwx
|
|
|
|
json-glib
|
|
|
|
jsoncpp
|
|
|
|
judy
|
|
|
|
julia
|
|
|
|
k8
|
hapdip: Create new package and its dependency k8. (#7685)
|
2018-04-06 15:40:58 -05:00 |
|
kahip
|
|
|
|
kaiju
|
A new pacakge: Kaiju. (#8111)
|
2018-05-14 11:07:00 -05:00 |
|
kaks-calculator
|
|
|
|
kaldi
|
|
|
|
kallisto
|
|
|
|
kbproto
|
|
|
|
kdiff3
|
|
|
|
kealib
|
|
|
|
kentutils
|
|
|
|
kmergenie
|
|
|
|
kokkos
|
Added OpenMP Variant for Kokkos (#7902)
|
2018-04-25 10:50:58 -05:00 |
|
kraken
|
|
|
|
krb5
|
Add package wireshark and dependencies (#8024)
|
2018-05-06 09:32:06 -05:00 |
|
krims
|
|
|
|
kripke
|
|
|
|
kvasir-mpl
|
|
|
|
laghos
|
|
|
|
lammps
|
lammps: add v20180316 (#7725)
|
2018-04-10 20:21:35 -05:00 |
|
last
|
|
|
|
latte
|
lammps: add v20180316 (#7725)
|
2018-04-10 20:21:35 -05:00 |
|
launchmon
|
|
|
|
lazyten
|
|
|
|
lbann
|
opencv updates for lbann (#6502)
|
2018-05-08 17:55:12 -07:00 |
|
lbxproxy
|
|
|
|
lcals
|
|
|
|
lcms
|
|
|
|
ldc
|
|
|
|
ldc-bootstrap
|
|
|
|
legion
|
|
|
|
leveldb
|
|
|
|
lftp
|
|
|
|
libaec
|
Use GitLab's API endpoint for fetching a git snapshot. (#7881)
|
2018-04-26 16:40:11 -05:00 |
|
libaio
|
|
|
|
libapplewm
|
|
|
|
libarchive
|
|
|
|
libassuan
|
|
|
|
libatomic-ops
|
|
|
|
libbeagle
|
|
|
|
libbsd
|
|
|
|
libbson
|
|
|
|
libcanberra
|
|
|
|
libcap
|
|
|
|
libceed
|
|
|
|
libcerf
|
|
|
|
libcheck
|
|
|
|
libcint
|
Add libcint version 3.0.12 (#7972)
|
2018-05-02 10:44:58 -05:00 |
|
libcircle
|
|
|
|
libconfig
|
|
|
|
libcroco
|
|
|
|
libctl
|
|
|
|
libdivsufsort
|
|
|
|
libdmx
|
|
|
|
libdrm
|
|
|
|
libdwarf
|
|
|
|
libedit
|
|
|
|
libelf
|
|
|
|
libemos
|
|
|
|
libepoxy
|
|
|
|
libev
|
|
|
|
libevent
|
|
|
|
libevpath
|
|
|
|
libfabric
|
Libfabric: updating fabrics & adding deps (#7838)
|
2018-04-25 10:35:36 -05:00 |
|
libffi
|
|
|
|
libffs
|
|
|
|
libfontenc
|
|
|
|
libfs
|
|
|
|
libgcrypt
|
|
|
|
libgd
|
|
|
|
libgit2
|
|
|
|
libgpg-error
|
|
|
|
libgpuarray
|
|
|
|
libgridxc
|
|
|
|
libgtextutils
|
|
|
|
libharu
|
|
|
|
libhio
|
|
|
|
libice
|
|
|
|
libiconv
|
|
|
|
libint
|
|
|
|
libjpeg
|
|
|
|
libjpeg-turbo
|
Add cmake for newer version of libjpeg-turbo (#8102)
|
2018-05-13 22:01:36 -05:00 |
|
libksba
|
|
|
|
liblbxutil
|
|
|
|
liblockfile
|
|
|
|
libmatheval
|
|
|
|
libmaxminddb
|
Add package wireshark and dependencies (#8024)
|
2018-05-06 09:32:06 -05:00 |
|
libmesh
|
|
|
|
libmng
|
|
|
|
libmongoc
|
|
|
|
libmonitor
|
|
|
|
libnbc
|
|
|
|
libnl
|
libnl: new package (#7833)
|
2018-04-25 10:33:01 -05:00 |
|
libogg
|
|
|
|
liboldx
|
|
|
|
libpcap
|
|
|
|
libpciaccess
|
|
|
|
libpfm4
|
|
|
|
libpipeline
|
|
|
|
libpng
|
|
|
|
libpsl
|
|
|
|
libpthread-stubs
|
|
|
|
libquo
|
|
|
|
librom
|
|
|
|
libshm
|
A new library: libshm. (#8028)
|
2018-05-05 17:16:48 -05:00 |
|
libsigsegv
|
|
|
|
libsm
|
|
|
|
libsodium
|
|
|
|
libspatialindex
|
|
|
|
libsplash
|
|
|
|
libssh
|
add variants and conflicts for curl (#7804)
|
2018-04-19 07:23:16 -05:00 |
|
libssh2
|
|
|
|
libsvm
|
|
|
|
libszip
|
|
|
|
libtermkey
|
|
|
|
libtiff
|
|
|
|
libtool
|
|
|
|
libunistring
|
|
|
|
libunwind
|
|
|
|
libuuid
|
|
|
|
libuv
|
|
|
|
libvorbis
|
|
|
|
libvterm
|
|
|
|
libwebsockets
|
|
|
|
libwindowswm
|
|
|
|
libx11
|
glvis@3.3: new package (#7166)
|
2018-04-17 07:48:48 -05:00 |
|
libxau
|
|
|
|
libxaw
|
|
|
|
libxaw3d
|
|
|
|
libxc
|
|
|
|
libxcb
|
Add latest versions of libxcb and xcb-proto (#7650)
|
2018-04-10 11:47:02 -05:00 |
|
libxcomposite
|
|
|
|
libxcursor
|
|
|
|
libxdamage
|
|
|
|
libxdmcp
|
|
|
|
libxevie
|
|
|
|
libxext
|
|
|
|
libxfixes
|
|
|
|
libxfont
|
|
|
|
libxfont2
|
|
|
|
libxfontcache
|
|
|
|
libxft
|
|
|
|
libxi
|
|
|
|
libxinerama
|
|
|
|
libxkbcommon
|
|
|
|
libxkbfile
|
|
|
|
libxkbui
|
|
|
|
libxml2
|
libxml2: adding subdir to cpath for deps (#7819)
|
2018-04-19 09:01:11 -05:00 |
|
libxmu
|
|
|
|
libxp
|
|
|
|
libxpm
|
|
|
|
libxpresent
|
|
|
|
libxprintapputil
|
|
|
|
libxprintutil
|
|
|
|
libxrandr
|
|
|
|
libxrender
|
|
|
|
libxres
|
|
|
|
libxscrnsaver
|
|
|
|
libxshmfence
|
|
|
|
libxslt
|
|
|
|
libxsmm
|
|
|
|
libxstream
|
|
|
|
libxt
|
shoremap: new package (#7343)
|
2018-05-12 08:22:45 +02:00 |
|
libxtrap
|
|
|
|
libxtst
|
|
|
|
libxv
|
|
|
|
libxvmc
|
|
|
|
libxxf86dga
|
|
|
|
libxxf86misc
|
|
|
|
libxxf86vm
|
|
|
|
libyogrt
|
|
|
|
libzip
|
|
|
|
likwid
|
|
|
|
linkphase3
|
|
|
|
linux-headers
|
|
|
|
listres
|
|
|
|
llvm
|
llvm: replace @when with internal check in @run_before (#8092)
|
2018-05-11 12:32:26 -07:00 |
|
llvm-openmp-ompt
|
|
|
|
lmdb
|
|
|
|
lmod
|
Added the latest versions of a few packages (#7910)
|
2018-04-26 14:46:45 +02:00 |
|
lndir
|
|
|
|
log4cplus
|
|
|
|
log4cxx
|
|
|
|
loki
|
A new package: loki. (#7908)
|
2018-04-26 08:37:03 -05:00 |
|
lrslib
|
|
|
|
lrzip
|
|
|
|
lsof
|
|
|
|
ltrace
|
|
|
|
lua
|
|
|
|
lua-bitlib
|
|
|
|
lua-jit
|
|
|
|
lua-lpeg
|
|
|
|
lua-luafilesystem
|
|
|
|
lua-luaposix
|
|
|
|
lua-mpack
|
|
|
|
luit
|
|
|
|
lulesh
|
|
|
|
lumpy-sv
|
|
|
|
lwgrp
|
|
|
|
lwm2
|
|
|
|
lz4
|
|
|
|
lzma
|
|
|
|
lzo
|
|
|
|
m4
|
|
|
|
macsio
|
|
|
|
mad-numdiff
|
|
|
|
mafft
|
|
|
|
magics
|
|
|
|
magma
|
|
|
|
makedepend
|
|
|
|
mallocmc
|
|
|
|
man-db
|
|
|
|
manta
|
manta: Create new package (#8043)
|
2018-05-07 17:22:43 -05:00 |
|
maq
|
|
|
|
mariadb
|
|
|
|
masa
|
|
|
|
masurca
|
masurca: new version (#8094)
|
2018-05-11 14:43:21 -05:00 |
|
matio
|
|
|
|
matlab
|
|
|
|
maven
|
|
|
|
maverick
|
|
|
|
mawk
|
|
|
|
mbedtls
|
|
|
|
mc
|
|
|
|
mcl
|
|
|
|
mdtest
|
|
|
|
meep
|
|
|
|
mefit
|
|
|
|
memaxes
|
|
|
|
meme
|
|
|
|
meraculous
|
|
|
|
mercurial
|
|
|
|
mesa
|
|
|
|
mesa-glu
|
glu: new virtual package; openglu: new package (#7162)
|
2018-04-12 07:16:16 -07:00 |
|
meshkit
|
|
|
|
meson
|
|
|
|
mesquite
|
|
|
|
metabat
|
metabat: Create new package (#7991)
|
2018-05-06 10:56:03 -05:00 |
|
metaphysicl
|
|
|
|
metasv
|
|
|
|
metis
|
|
|
|
mfem
|
mfem: fix concretization (#7923)
|
2018-04-28 07:16:43 -05:00 |
|
microbiomeutil
|
|
|
|
minced
|
|
|
|
mindthegap
|
|
|
|
miniaero
|
|
|
|
miniamr
|
|
|
|
miniasm
|
miniasm: new package (#7772)
|
2018-04-16 16:06:09 -05:00 |
|
miniconda2
|
|
|
|
miniconda3
|
|
|
|
minife
|
|
|
|
minighost
|
|
|
|
minigmg
|
|
|
|
minimap2
|
|
|
|
minimd
|
|
|
|
miniqmc
|
|
|
|
minisign
|
|
|
|
minismac2d
|
|
|
|
minitri
|
|
|
|
minixyce
|
|
|
|
mira
|
|
|
|
mirdeep
|
|
|
|
mitofates
|
|
|
|
mitos
|
|
|
|
mkfontdir
|
|
|
|
mkfontscale
|
|
|
|
mlhka
|
|
|
|
moab
|
|
|
|
modern-wheel
|
|
|
|
molcas
|
|
|
|
mono
|
Add a new version 5.4.1.7 for mono. (#7866)
|
2018-04-23 07:31:29 -05:00 |
|
mosh
|
|
|
|
mothur
|
|
|
|
motif
|
|
|
|
motioncor2
|
|
|
|
mozjs
|
|
|
|
mpark-variant
|
|
|
|
mpc
|
|
|
|
mpe2
|
|
|
|
mpest
|
|
|
|
mpfr
|
|
|
|
mpibash
|
|
|
|
mpiblast
|
|
|
|
mpich
|
|
|
|
mpifileutils
|
mpifileutils: roll back to dtcmp v1.0.3, add option to build master branch (#7949)
|
2018-04-30 18:46:17 -05:00 |
|
mpileaks
|
|
|
|
mpip
|
|
|
|
mpir
|
|
|
|
mpix-launch-swift
|
|
|
|
mrbayes
|
|
|
|
mrnet
|
|
|
|
mrtrix3
|
|
|
|
mscgen
|
|
|
|
msgpack-c
|
|
|
|
mshadow
|
|
|
|
multitail
|
|
|
|
multiverso
|
|
|
|
mummer
|
|
|
|
mumps
|
|
|
|
munge
|
|
|
|
muparser
|
|
|
|
muscle
|
|
|
|
muse
|
|
|
|
muster
|
|
|
|
mvapich2
|
mvapich2: add 2.3rc2 (#7976)
|
2018-05-02 14:23:32 -05:00 |
|
mxml
|
|
|
|
mxnet
|
|
|
|
nag
|
|
|
|
nalu
|
|
|
|
namd
|
|
|
|
nano
|
|
|
|
nanoflann
|
|
|
|
nanopb
|
A new package: nanopb. (#7981)
|
2018-05-03 10:12:37 -05:00 |
|
nasm
|
|
|
|
nauty
|
|
|
|
ncbi-rmblastn
|
|
|
|
nccl
|
|
|
|
nccmp
|
|
|
|
ncdu
|
|
|
|
ncftp
|
|
|
|
ncl
|
|
|
|
nco
|
|
|
|
ncurses
|
|
|
|
ncview
|
|
|
|
ndiff
|
|
|
|
nek5000
|
|
|
|
nekbone
|
|
|
|
nekcem
|
|
|
|
neovim
|
|
|
|
netcdf
|
netcdf: added version 4.6.1 (#8098)
|
2018-05-12 17:24:59 +02:00 |
|
netcdf-cxx
|
|
|
|
netcdf-cxx4
|
|
|
|
netcdf-fortran
|
|
|
|
netgauge
|
|
|
|
netgen
|
gmsh: add netgen and tetgen (#8060)
|
2018-05-11 14:22:12 +02:00 |
|
netlib-lapack
|
|
|
|
netlib-scalapack
|
|
|
|
netlib-xblas
|
|
|
|
nettle
|
|
|
|
neuron
|
|
|
|
nextflow
|
|
|
|
nfft
|
nfft: added version 3.4.1 Moved package to github (#8099)
|
2018-05-12 17:25:28 +02:00 |
|
nghttp2
|
|
|
|
nginx
|
|
|
|
ngmlr
|
|
|
|
ninja
|
|
|
|
ninja-fortran
|
|
|
|
nlohmann-json
|
Add Package: nlohmann_json (#7690)
|
2018-04-07 11:00:00 -05:00 |
|
nlopt
|
|
|
|
nmap
|
|
|
|
nnvm
|
|
|
|
node-js
|
|
|
|
notmuch
|
|
|
|
npb
|
|
|
|
npm
|
|
|
|
npth
|
|
|
|
nspr
|
|
|
|
numactl
|
|
|
|
numdiff
|
|
|
|
nut
|
|
|
|
nwchem
|
|
|
|
ocaml
|
|
|
|
occa
|
|
|
|
oce
|
|
|
|
oclint
|
|
|
|
oclock
|
|
|
|
octave
|
|
|
|
octave-optim
|
|
|
|
octave-splines
|
|
|
|
octave-struct
|
|
|
|
octopus
|
octopus: add 7.3 (#7666)
|
2018-04-04 16:35:03 +02:00 |
|
of-adios-write
|
|
|
|
omega-h
|
omega-h: new package (#7861)
|
2018-04-22 17:26:52 -05:00 |
|
ompss
|
|
|
|
ompt-openmp
|
|
|
|
oniguruma
|
|
|
|
ont-albacore
|
|
|
|
opa-psm2
|
|
|
|
opam
|
|
|
|
opari2
|
|
|
|
openbabel
|
|
|
|
openblas
|
|
|
|
opencoarrays
|
|
|
|
opencv
|
opencv updates for lbann (#6502)
|
2018-05-08 17:55:12 -07:00 |
|
openexr
|
|
|
|
openfast
|
|
|
|
openfoam-com
|
|
|
|
openfoam-org
|
|
|
|
openfst
|
|
|
|
opengl
|
glvis@3.3: new package (#7166)
|
2018-04-17 07:48:48 -05:00 |
|
openglu
|
glvis@3.3: new package (#7166)
|
2018-04-17 07:48:48 -05:00 |
|
openjpeg
|
|
|
|
openmc
|
openmc is not a proxy (#7968)
|
2018-05-02 06:48:16 -06:00 |
|
openmpi
|
openmpi: new version (#8055)
|
2018-05-08 12:35:44 -05:00 |
|
opennurbs
|
|
|
|
openpmd-api
|
openPMD-api (#7765)
|
2018-04-19 09:04:07 -05:00 |
|
openscenegraph
|
|
|
|
openslide
|
A new package: openslide. (#7906)
|
2018-04-26 07:17:15 +02:00 |
|
openspeedshop
|
Simple updates to the Krell Institute OpenSpeedShop and CBTF components build package files. (#7812)
|
2018-04-18 14:05:53 -05:00 |
|
openssh
|
|
|
|
openssl
|
|
|
|
opium
|
|
|
|
opus
|
|
|
|
orfm
|
|
|
|
orthofinder
|
|
|
|
orthomcl
|
|
|
|
osu-micro-benchmarks
|
|
|
|
otf
|
|
|
|
otf2
|
|
|
|
p4est
|
|
|
|
p7zip
|
|
|
|
pacbio-daligner
|
|
|
|
pacbio-damasker
|
|
|
|
pacbio-dazz-db
|
|
|
|
pacbio-dextractor
|
|
|
|
pagit
|
|
|
|
pagmo
|
|
|
|
paml
|
|
|
|
panda
|
|
|
|
pandaseq
|
|
|
|
pango
|
|
|
|
papi
|
|
|
|
papyrus
|
a new package: papyrus. (#8023)
|
2018-05-04 18:51:37 -05:00 |
|
paradiseo
|
|
|
|
parallel
|
|
|
|
parallel-netcdf
|
|
|
|
paraver
|
|
|
|
paraview
|
|
|
|
parmetis
|
|
|
|
parmgridgen
|
|
|
|
parsimonator
|
|
|
|
parsplice
|
Use GitLab's API endpoint for fetching a git snapshot. (#7881)
|
2018-04-26 16:40:11 -05:00 |
|
partitionfinder
|
|
|
|
patch
|
|
|
|
patchelf
|
|
|
|
pathfinder
|
|
|
|
pax-utils
|
|
|
|
pbmpi
|
|
|
|
pcma
|
|
|
|
pcre
|
|
|
|
pcre2
|
|
|
|
pdf2svg
|
new package: py-weblogo (#7886)
|
2018-04-24 19:31:37 -07:00 |
|
pdsh
|
|
|
|
pdt
|
|
|
|
pegtl
|
|
|
|
pennant
|
|
|
|
percept
|
|
|
|
perl
|
perl: add 5.26.2 (#7984)
|
2018-05-07 13:40:32 -05:00 |
|
perl-algorithm-diff
|
|
|
|
perl-app-cmd
|
|
|
|
perl-array-utils
|
|
|
|
perl-b-hooks-endofscope
|
|
|
|
perl-bio-perl
|
|
|
|
perl-bit-vector
|
|
|
|
perl-cairo
|
|
|
|
perl-capture-tiny
|
|
|
|
perl-carp-clan
|
|
|
|
perl-class-data-inheritable
|
|
|
|
perl-class-inspector
|
|
|
|
perl-class-load
|
|
|
|
perl-class-load-xs
|
|
|
|
perl-contextual-return
|
perl-contextual-return: Create new package (#7741)
|
2018-04-12 15:56:07 -05:00 |
|
perl-cpan-meta-check
|
|
|
|
perl-data-optlist
|
|
|
|
perl-data-stag
|
|
|
|
perl-dbd-mysql
|
|
|
|
perl-dbfile
|
|
|
|
perl-dbi
|
|
|
|
perl-devel-cycle
|
|
|
|
perl-devel-globaldestruction
|
|
|
|
perl-devel-overloadinfo
|
perl-devel-overloadinfo: Add version 0.005 (#7754)
|
2018-04-13 16:58:50 -05:00 |
|
perl-devel-stacktrace
|
|
|
|
perl-digest-md5
|
|
|
|
perl-dist-checkconflicts
|
|
|
|
perl-encode-locale
|
|
|
|
perl-eval-closure
|
|
|
|
perl-exception-class
|
|
|
|
perl-exporter-tiny
|
|
|
|
perl-extutils-depends
|
|
|
|
perl-extutils-makemaker
|
|
|
|
perl-extutils-pkgconfig
|
perl-extutils-pkgconfig: Add pkg-config dependency (#8045)
|
2018-05-09 13:10:36 -05:00 |
|
perl-file-copy-recursive
|
Perl file copy recursive 0.40 (#7718)
|
2018-04-10 11:48:02 -05:00 |
|
perl-file-listing
|
|
|
|
perl-file-pushd
|
|
|
|
perl-file-sharedir-install
|
|
|
|
perl-file-slurp-tiny
|
|
|
|
perl-file-slurper
|
|
|
|
perl-file-which
|
|
|
|
perl-font-ttf
|
|
|
|
perl-gd
|
|
|
|
perl-gd-graph
|
|
|
|
perl-gd-text
|
|
|
|
perl-graph
|
|
|
|
perl-graph-readwrite
|
|
|
|
perl-html-parser
|
|
|
|
perl-html-tagset
|
|
|
|
perl-http-cookies
|
|
|
|
perl-http-daemon
|
|
|
|
perl-http-date
|
|
|
|
perl-http-message
|
|
|
|
perl-http-negotiate
|
|
|
|
perl-inline
|
|
|
|
perl-inline-c
|
|
|
|
perl-intervaltree
|
|
|
|
perl-io-html
|
|
|
|
perl-io-sessiondata
|
|
|
|
perl-io-socket-ssl
|
|
|
|
perl-io-string
|
|
|
|
perl-json
|
|
|
|
perl-libwww-perl
|
py-mg-rast-tools: Create new package and its dependencies. (#7816)
|
2018-04-21 10:28:44 -05:00 |
|
perl-list-moreutils
|
|
|
|
perl-log-log4perl
|
|
|
|
perl-lwp
|
|
|
|
perl-lwp-mediatypes
|
|
|
|
perl-lwp-protocol-https
|
|
|
|
perl-math-cdf
|
|
|
|
perl-math-matrixreal
|
perl-math-matrixreal: Create new package (#7737)
|
2018-04-12 12:53:53 -05:00 |
|
perl-module-build
|
|
|
|
perl-module-implementation
|
|
|
|
perl-module-runtime
|
|
|
|
perl-module-runtime-conflicts
|
|
|
|
perl-moose
|
perl-moose: Add versions 2.2007,2.2009,2.2010 (#7758)
|
2018-04-13 19:08:13 -05:00 |
|
perl-mozilla-ca
|
|
|
|
perl-mro-compat
|
|
|
|
perl-namespace-clean
|
|
|
|
perl-net-http
|
|
|
|
perl-net-scp-expect
|
|
|
|
perl-net-ssleay
|
|
|
|
perl-package-deprecationmanager
|
|
|
|
perl-package-stash
|
|
|
|
perl-package-stash-xs
|
|
|
|
perl-padwalker
|
|
|
|
perl-parallel-forkmanager
|
|
|
|
perl-params-util
|
|
|
|
perl-parse-recdescent
|
|
|
|
perl-pdf-api2
|
|
|
|
perl-pegex
|
|
|
|
perl-perlio-gzip
|
|
|
|
perl-perlio-utf8-strict
|
perl-perlio-utf8-strict: Create new package (#7738)
|
2018-04-12 14:02:37 -05:00 |
|
perl-soap-lite
|
|
|
|
perl-star-fusion
|
|
|
|
perl-statistics-descriptive
|
|
|
|
perl-statistics-pca
|
perl-statistics-pca: Create new package (#7796)
|
2018-04-17 13:30:12 -05:00 |
|
perl-sub-exporter
|
|
|
|
perl-sub-exporter-progressive
|
|
|
|
perl-sub-identify
|
|
|
|
perl-sub-install
|
|
|
|
perl-sub-name
|
|
|
|
perl-sub-uplevel
|
|
|
|
perl-svg
|
|
|
|
perl-swissknife
|
|
|
|
perl-task-weaken
|
|
|
|
perl-term-readkey
|
|
|
|
perl-test-cleannamespaces
|
|
|
|
perl-test-deep
|
|
|
|
perl-test-differences
|
|
|
|
perl-test-exception
|
|
|
|
perl-test-fatal
|
|
|
|
perl-test-memory-cycle
|
|
|
|
perl-test-most
|
|
|
|
perl-test-needs
|
|
|
|
perl-test-requires
|
|
|
|
perl-test-requiresinternet
|
|
|
|
perl-test-warn
|
|
|
|
perl-test-warnings
|
|
|
|
perl-text-csv
|
|
|
|
perl-text-diff
|
|
|
|
perl-text-simpletable
|
perl-text-simpletable: Create new package (#7739)
|
2018-04-12 13:29:51 -05:00 |
|
perl-text-unidecode
|
|
|
|
perl-time-hires
|
|
|
|
perl-time-piece
|
|
|
|
perl-try-tiny
|
|
|
|
perl-uri
|
|
|
|
perl-uri-escape
|
|
|
|
perl-version
|
|
|
|
perl-want
|
perl-want: Create new package (#7734)
|
2018-04-12 12:24:28 -05:00 |
|
perl-www-robotrules
|
|
|
|
perl-xml-libxml
|
|
|
|
perl-xml-parser
|
|
|
|
perl-xml-parser-lite
|
|
|
|
perl-xml-simple
|
|
|
|
perl-yaml-libyaml
|
|
|
|
petsc
|
petsc: specify number of processors used for test case (#8015)
|
2018-05-10 10:49:18 -07:00 |
|
pexsi
|
|
|
|
pfft
|
|
|
|
pflotran
|
|
|
|
pfunit
|
pfunit: update (#7994)
|
2018-05-03 17:02:20 -05:00 |
|
pgdspider
|
|
|
|
pgi
|
Bump pgi to 18.4. (#7980)
|
2018-05-03 10:12:17 -05:00 |
|
phantompeakqualtools
|
|
|
|
phasta
|
|
|
|
phist
|
|
|
|
phylip
|
|
|
|
picard
|
Added the latest versions of a few packages (#7910)
|
2018-04-26 14:46:45 +02:00 |
|
pidx
|
|
|
|
pigz
|
|
|
|
pilon
|
|
|
|
pindel
|
|
|
|
piranha
|
|
|
|
pism
|
pism: new package (#8010)
|
2018-05-03 22:54:00 -05:00 |
|
pixman
|
Add patch (#8034)
|
2018-05-07 09:51:27 -05:00 |
|
pkg-config
|
|
|
|
pkgconf
|
pkgconf: use alpine linux mirror to avoid ssl error (#8039)
|
2018-05-07 10:46:58 -06:00 |
|
planck-likelihood
|
|
|
|
plasma
|
|
|
|
plink
|
plink: new source version 1.9-beta5 (#8076)
|
2018-05-12 18:38:22 -05:00 |
|
plumed
|
|
|
|
pmgr-collective
|
|
|
|
pmix
|
pmix: add 1.2.5 and 2.0.3 bug fix releases (#8097)
|
2018-05-11 21:58:29 -05:00 |
|
pnfft
|
|
|
|
pngwriter
|
|
|
|
pnmpi
|
|
|
|
poamsa
|
|
|
|
pocl
|
|
|
|
polymake
|
|
|
|
poppler
|
new package: py-weblogo (#7886)
|
2018-04-24 19:31:37 -07:00 |
|
porta
|
|
|
|
portage
|
|
|
|
postgresql
|
|
|
|
ppl
|
|
|
|
prank
|
prank: Add version 170427 (#7755)
|
2018-04-13 16:58:39 -05:00 |
|
presentproto
|
|
|
|
preseq
|
|
|
|
price
|
|
|
|
primer3
|
|
|
|
prinseq-lite
|
prinseq-lite: Create new package (#7873)
|
2018-04-23 16:11:27 -05:00 |
|
printproto
|
|
|
|
probconsrna
|
|
|
|
prodigal
|
|
|
|
proj
|
|
|
|
protobuf
|
Add 3.5.2; Add optional cpp implementation enable for py-protobuf (#8069)
|
2018-05-09 20:52:39 -05:00 |
|
proxymngr
|
|
|
|
pruners-ninja
|
|
|
|
ps-lite
|
|
|
|
psi4
|
|
|
|
psm
|
psm: new package (#7834)
|
2018-04-25 10:34:31 -05:00 |
|
psmc
|
psmc: new package (#7773)
|
2018-04-17 13:30:30 -05:00 |
|
pstreams
|
|
|
|
pugixml
|
|
|
|
pumi
|
|
|
|
pvm
|
|
|
|
py-3to2
|
|
|
|
py-4suite-xml
|
|
|
|
py-abipy
|
|
|
|
py-adios
|
|
|
|
py-affine
|
|
|
|
py-alabaster
|
|
|
|
py-apache-libcloud
|
|
|
|
py-apipkg
|
|
|
|
py-appdirs
|
|
|
|
py-appnope
|
|
|
|
py-apscheduler
|
|
|
|
py-argcomplete
|
|
|
|
py-argparse
|
|
|
|
py-ase
|
|
|
|
py-asn1crypto
|
|
|
|
py-astroid
|
|
|
|
py-astropy
|
|
|
|
py-attrs
|
|
|
|
py-autopep8
|
|
|
|
py-babel
|
|
|
|
py-backports-abc
|
|
|
|
py-backports-functools-lru-cache
|
|
|
|
py-backports-shutil-get-terminal-size
|
|
|
|
py-backports-ssl-match-hostname
|
|
|
|
py-basemap
|
|
|
|
py-bcbio-gff
|
|
|
|
py-beautifulsoup4
|
|
|
|
py-binwalk
|
|
|
|
py-biom-format
|
|
|
|
py-biopython
|
|
|
|
py-bitarray
|
|
|
|
py-bitstring
|
|
|
|
py-bleach
|
|
|
|
py-blessings
|
|
|
|
py-bokeh
|
|
|
|
py-boltons
|
|
|
|
py-bottleneck
|
|
|
|
py-breakseq2
|
|
|
|
py-brian
|
|
|
|
py-brian2
|
|
|
|
py-bsddb3
|
py-bsddb3: update (#8006)
|
2018-05-03 19:20:14 -05:00 |
|
py-bx-python
|
|
|
|
py-cclib
|
|
|
|
py-cdat-lite
|
|
|
|
py-cdo
|
|
|
|
py-certifi
|
|
|
|
py-cffi
|
|
|
|
py-chardet
|
|
|
|
py-checkm-genome
|
|
|
|
py-click
|
|
|
|
py-cligj
|
|
|
|
py-cnvkit
|
Py cnvkit: updating dependencies (#8057)
|
2018-05-08 17:54:15 -05:00 |
|
py-cogent
|
|
|
|
py-colorama
|
|
|
|
py-colormath
|
|
|
|
py-configparser
|
|
|
|
py-counter
|
|
|
|
py-coverage
|
|
|
|
py-cpuinfo
|
|
|
|
py-crispresso
|
py-crispresso: Create new package (#7990)
|
2018-05-03 13:09:59 -05:00 |
|
py-crossmap
|
|
|
|
py-cryptography
|
|
|
|
py-csvkit
|
|
|
|
py-current
|
|
|
|
py-cutadapt
|
|
|
|
py-cvxopt
|
|
|
|
py-cycler
|
|
|
|
py-cython
|
py-cython: update (#8005)
|
2018-05-03 16:46:15 -05:00 |
|
py-dask
|
|
|
|
py-dateutil
|
|
|
|
py-dbf
|
|
|
|
py-decorator
|
|
|
|
py-deeptools
|
|
|
|
py-dendropy
|
|
|
|
py-dev
|
|
|
|
py-dill
|
|
|
|
py-discover
|
add package py-discover (#7671)
|
2018-04-05 09:18:07 -05:00 |
|
py-dlcpar
|
py-dlcpar: Add package description (#8032)
|
2018-05-07 06:44:16 -05:00 |
|
py-docutils
|
|
|
|
py-doxypy
|
|
|
|
py-doxypypy
|
|
|
|
py-dryscrape
|
|
|
|
py-dxchange
|
|
|
|
py-dxfile
|
|
|
|
py-easybuild-easyblocks
|
|
|
|
py-easybuild-easyconfigs
|
|
|
|
py-easybuild-framework
|
|
|
|
py-edffile
|
|
|
|
py-editdistance
|
Fix www.example.com homepages (#7744)
|
2018-04-13 07:08:10 +02:00 |
|
py-elasticsearch
|
|
|
|
py-elephant
|
|
|
|
py-emcee
|
|
|
|
py-entrypoints
|
|
|
|
py-enum34
|
|
|
|
py-epydoc
|
|
|
|
py-espresso
|
|
|
|
py-espressopp
|
|
|
|
py-et-xmlfile
|
|
|
|
py-eventlet
|
add package py-eventlet (#7722)
|
2018-04-10 20:22:45 -05:00 |
|
py-execnet
|
|
|
|
py-fastaindex
|
|
|
|
py-fasteners
|
|
|
|
py-faststructure
|
|
|
|
py-fiscalyear
|
|
|
|
py-flake8
|
|
|
|
py-flask
|
add py-flask@0.12.2 (#7710)
|
2018-04-10 12:03:17 -05:00 |
|
py-flask-compress
|
add package py-flask-compress (#7713)
|
2018-04-10 11:58:35 -05:00 |
|
py-flask-socketio
|
add package py-flask-socketio (#7714)
|
2018-04-10 11:57:06 -05:00 |
|
py-flexx
|
|
|
|
py-fparser
|
|
|
|
py-funcsigs
|
|
|
|
py-functools32
|
|
|
|
py-future
|
|
|
|
py-futures
|
|
|
|
py-gdbgui
|
add package py-gdbgui (#7715)
|
2018-04-11 21:30:23 -05:00 |
|
py-genders
|
|
|
|
py-genshi
|
|
|
|
py-gevent
|
add package py-gevent (#7712)
|
2018-04-10 20:24:11 -05:00 |
|
py-git2
|
|
|
|
py-git-review
|
|
|
|
py-gnuplot
|
|
|
|
py-goatools
|
|
|
|
py-gpaw
|
|
|
|
py-greenlet
|
add package py-greenlet (#7720)
|
2018-04-10 20:22:28 -05:00 |
|
py-griddataformats
|
|
|
|
py-guidata
|
|
|
|
py-guiqwt
|
|
|
|
py-h5py
|
|
|
|
py-html2text
|
|
|
|
py-html5lib
|
|
|
|
py-htseq
|
|
|
|
py-httpbin
|
|
|
|
py-hypothesis
|
|
|
|
py-idna
|
|
|
|
py-igraph
|
|
|
|
py-illumina-utils
|
py-illumina-utils: Create new package (#7745)
|
2018-04-12 22:45:21 -05:00 |
|
py-imagesize
|
|
|
|
py-iminuit
|
|
|
|
py-importlib
|
|
|
|
py-ipaddress
|
|
|
|
py-ipdb
|
|
|
|
py-ipykernel
|
|
|
|
py-ipython
|
|
|
|
py-ipython-genutils
|
|
|
|
py-ipywidgets
|
|
|
|
py-isort
|
|
|
|
py-itsdangerous
|
|
|
|
py-jdcal
|
|
|
|
py-jedi
|
|
|
|
py-jinja2
|
|
|
|
py-joblib
|
|
|
|
py-jpype
|
|
|
|
py-jsonschema
|
|
|
|
py-junit-xml
|
|
|
|
py-jupyter-client
|
|
|
|
py-jupyter-console
|
|
|
|
py-jupyter-core
|
|
|
|
py-jupyter-notebook
|
|
|
|
py-keras
|
|
|
|
py-kiwisolver
|
fix dependencies for matplotlib@2.2.2 (#7735)
|
2018-04-12 12:53:30 -05:00 |
|
py-latexcodec
|
|
|
|
py-lazy
|
|
|
|
py-lazy-object-proxy
|
|
|
|
py-lazyarray
|
|
|
|
py-libconf
|
|
|
|
py-libensemble
|
|
|
|
py-line-profiler
|
|
|
|
py-linecache2
|
|
|
|
py-lit
|
|
|
|
py-llvmlite
|
Update py-llvmlite to reflect llvm@6 requirement for versions >0.23.0 (#8109)
|
2018-05-14 11:26:01 -05:00 |
|
py-lmfit
|
|
|
|
py-localcider
|
|
|
|
py-lockfile
|
|
|
|
py-logilab-common
|
|
|
|
py-lrudict
|
|
|
|
py-lxml
|
|
|
|
py-lzstring
|
|
|
|
py-macholib
|
|
|
|
py-machotools
|
|
|
|
py-macs2
|
|
|
|
py-maestrowf
|
|
|
|
py-mako
|
|
|
|
py-mappy
|
|
|
|
py-markdown
|
|
|
|
py-markupsafe
|
|
|
|
py-matplotlib
|
fix dependencies for matplotlib@2.2.2 (#7735)
|
2018-04-12 12:53:30 -05:00 |
|
py-mccabe
|
|
|
|
py-mdanalysis
|
|
|
|
py-meep
|
|
|
|
py-memory-profiler
|
|
|
|
py-methylcode
|
|
|
|
py-mg-rast-tools
|
py-mg-rast-tools: Create new package and its dependencies. (#7816)
|
2018-04-21 10:28:44 -05:00 |
|
py-misopy
|
|
|
|
py-mistune
|
|
|
|
py-mock
|
|
|
|
py-moltemplate
|
|
|
|
py-mongo
|
|
|
|
py-monotonic
|
|
|
|
py-monty
|
|
|
|
py-more-itertools
|
py-more-itertools: new package (#8004)
|
2018-05-04 16:27:14 -05:00 |
|
py-mpi4py
|
|
|
|
py-mpmath
|
|
|
|
py-multiprocess
|
|
|
|
py-multiqc
|
|
|
|
py-mx
|
|
|
|
py-mxnet
|
|
|
|
py-myhdl
|
|
|
|
py-mysqldb1
|
|
|
|
py-natsort
|
Package/geopm (#7560)
|
2018-04-17 07:51:56 -05:00 |
|
py-nbconvert
|
|
|
|
py-nbformat
|
|
|
|
py-neo
|
|
|
|
py-nestle
|
|
|
|
py-netcdf4
|
|
|
|
py-netifaces
|
|
|
|
py-networkx
|
|
|
|
py-nose
|
|
|
|
py-nosexcover
|
|
|
|
py-numba
|
|
|
|
py-numexpr
|
|
|
|
py-numexpr3
|
Add numexpr 3 (#8107)
|
2018-05-14 09:46:14 -05:00 |
|
py-numpy
|
py-numpy: update (#8003)
|
2018-05-03 22:53:41 -05:00 |
|
py-numpydoc
|
|
|
|
py-olefile
|
|
|
|
py-ont-fast5-api
|
|
|
|
py-openpmd-validator
|
|
|
|
py-openpyxl
|
|
|
|
py-openslide-python
|
A new package: py-openslide-python. (#7907)
|
2018-05-03 08:37:52 -05:00 |
|
py-ordereddict
|
|
|
|
py-oset
|
|
|
|
py-packaging
|
|
|
|
py-palettable
|
|
|
|
py-pandas
|
|
|
|
py-paramiko
|
|
|
|
py-pathlib2
|
|
|
|
py-pathos
|
|
|
|
py-pathspec
|
|
|
|
py-patsy
|
|
|
|
py-pbr
|
|
|
|
py-perf
|
|
|
|
py-performance
|
|
|
|
py-periodictable
|
|
|
|
py-petsc4py
|
|
|
|
py-pexpect
|
|
|
|
py-phonopy
|
|
|
|
py-pickleshare
|
|
|
|
py-pil
|
|
|
|
py-pillow
|
|
|
|
py-pip
|
|
|
|
py-pipits
|
|
|
|
py-pkgconfig
|
|
|
|
py-plotly
|
|
|
|
py-ply
|
|
|
|
py-pmw
|
|
|
|
py-poster
|
py-mg-rast-tools: Create new package and its dependencies. (#7816)
|
2018-04-21 10:28:44 -05:00 |
|
py-pox
|
|
|
|
py-ppft
|
|
|
|
py-prettytable
|
|
|
|
py-proj
|
|
|
|
py-prompt-toolkit
|
|
|
|
py-protobuf
|
Add 3.5.2; Add optional cpp implementation enable for py-protobuf (#8069)
|
2018-05-09 20:52:39 -05:00 |
|
py-psutil
|
|
|
|
py-psyclone
|
|
|
|
py-ptyprocess
|
|
|
|
py-pudb
|
|
|
|
py-py
|
|
|
|
py-py2bit
|
|
|
|
py-py2cairo
|
|
|
|
py-py2neo
|
|
|
|
py-py4j
|
|
|
|
py-pyani
|
|
|
|
py-pyasn1
|
|
|
|
py-pybedtools
|
|
|
|
py-pybigwig
|
|
|
|
py-pybind11
|
pybind11: v2.2.3 (#8051)
|
2018-05-08 12:43:38 -05:00 |
|
py-pybtex
|
|
|
|
py-pybtex-docutils
|
|
|
|
py-pychecker
|
|
|
|
py-pycodestyle
|
|
|
|
py-pycparser
|
|
|
|
py-pycrypto
|
|
|
|
py-pycurl
|
|
|
|
py-pydatalog
|
|
|
|
py-pydispatcher
|
|
|
|
py-pydot
|
|
|
|
py-pyelftools
|
|
|
|
py-pyfaidx
|
py-pyfaidx: adding new package (#7684)
|
2018-04-06 20:07:35 -05:00 |
|
py-pyfasta
|
|
|
|
py-pyfftw
|
|
|
|
py-pyflakes
|
|
|
|
py-pygdbmi
|
add package py-pygdbmi (#7711)
|
2018-04-10 14:35:26 -05:00 |
|
py-pygments
|
|
|
|
py-pygobject
|
|
|
|
py-pygpu
|
|
|
|
py-pygtk
|
|
|
|
py-pylint
|
|
|
|
py-pymatgen
|
|
|
|
py-pyminifier
|
|
|
|
py-pymol
|
py-pymol: new package (#7823)
|
2018-04-21 10:28:09 -05:00 |
|
py-pympler
|
|
|
|
py-pynn
|
|
|
|
py-pypar
|
|
|
|
py-pyparsing
|
|
|
|
py-pypeflow
|
|
|
|
py-pyprof2html
|
|
|
|
py-pyqt
|
|
|
|
py-pyrad
|
|
|
|
py-pysam
|
Bump pysam to 0.14.1. (#7988)
|
2018-05-04 22:11:26 -05:00 |
|
py-pyscaf
|
|
|
|
py-pyserial
|
|
|
|
py-pyside
|
py-pyside: update (#8002)
|
2018-05-03 16:50:55 -05:00 |
|
py-pysocks
|
|
|
|
py-pysqlite
|
py-pysqlite: Create new package (#8042)
|
2018-05-07 13:42:24 -05:00 |
|
py-pytables
|
|
|
|
py-pytest
|
|
|
|
py-pytest-cov
|
|
|
|
py-pytest-flake8
|
|
|
|
py-pytest-httpbin
|
|
|
|
py-pytest-mock
|
|
|
|
py-pytest-runner
|
|
|
|
py-pytest-xdist
|
|
|
|
py-python-daemon
|
|
|
|
py-python-engineio
|
add package py-python-engineio (#7723)
|
2018-04-10 20:21:57 -05:00 |
|
py-python-gitlab
|
|
|
|
py-python-levenshtein
|
|
|
|
py-python-socketio
|
add package py-python-socketio (#7721)
|
2018-04-11 14:21:37 -05:00 |
|
py-pythonqwt
|
|
|
|
py-pytz
|
|
|
|
py-pyutilib
|
|
|
|
py-pyvcf
|
|
|
|
py-pywavelets
|
|
|
|
py-pyyaml
|
|
|
|
py-qtawesome
|
|
|
|
py-qtconsole
|
|
|
|
py-qtpy
|
|
|
|
py-quantities
|
|
|
|
py-quast
|
|
|
|
py-radical-utils
|
|
|
|
py-ranger
|
|
|
|
py-rasterio
|
|
|
|
py-readme-renderer
|
|
|
|
py-regex
|
|
|
|
py-reportlab
|
|
|
|
py-requests
|
|
|
|
py-requests-toolbelt
|
py-mg-rast-tools: Create new package and its dependencies. (#7816)
|
2018-04-21 10:28:44 -05:00 |
|
py-restview
|
|
|
|
py-rope
|
|
|
|
py-rpy2
|
|
|
|
py-rsa
|
|
|
|
py-rseqc
|
|
|
|
py-rtree
|
|
|
|
py-saga-python
|
|
|
|
py-scandir
|
|
|
|
py-scientificpython
|
|
|
|
py-scikit-image
|
|
|
|
py-scikit-learn
|
|
|
|
py-scipy
|
py-numpy: update (#8003)
|
2018-05-03 22:53:41 -05:00 |
|
py-seaborn
|
|
|
|
py-setuptools
|
|
|
|
py-setuptools-git
|
|
|
|
py-setuptools-scm
|
|
|
|
py-sfepy
|
|
|
|
py-sh
|
|
|
|
py-shiboken
|
|
|
|
py-simplegeneric
|
|
|
|
py-simplejson
|
|
|
|
py-singledispatch
|
|
|
|
py-sip
|
|
|
|
py-six
|
|
|
|
py-slepc4py
|
|
|
|
py-slurm-pipeline
|
add version 2.0.9 to py-slurm-pipeline (#7771)
|
2018-04-16 10:13:06 -05:00 |
|
py-sncosmo
|
|
|
|
py-snowballstemmer
|
|
|
|
py-snuggs
|
|
|
|
py-spectra
|
|
|
|
py-spefile
|
|
|
|
py-spglib
|
|
|
|
py-sphinx
|
sphinx: Updated to v1.7.4 (#7977)
|
2018-05-02 14:23:02 -05:00 |
|
py-sphinx-bootstrap-theme
|
|
|
|
py-sphinx-rtd-theme
|
|
|
|
py-sphinxcontrib-bibtex
|
|
|
|
py-sphinxcontrib-programoutput
|
|
|
|
py-sphinxcontrib-websupport
|
|
|
|
py-spyder
|
|
|
|
py-spykeutils
|
|
|
|
py-sqlalchemy
|
|
|
|
py-statsmodels
|
|
|
|
py-stevedore
|
|
|
|
py-storm
|
|
|
|
py-subprocess32
|
|
|
|
py-symengine
|
|
|
|
py-symfit
|
|
|
|
py-sympy
|
|
|
|
py-tabulate
|
|
|
|
py-tappy
|
|
|
|
py-terminado
|
|
|
|
py-testinfra
|
py-testinfra: Create new package (#7883)
|
2018-04-25 10:29:45 -05:00 |
|
py-tetoolkit
|
|
|
|
py-theano
|
|
|
|
py-tifffile
|
|
|
|
py-toml
|
|
|
|
py-tomopy
|
|
|
|
py-tornado
|
|
|
|
py-tqdm
|
|
|
|
py-traceback2
|
|
|
|
py-traitlets
|
|
|
|
py-tuiview
|
|
|
|
py-twisted
|
|
|
|
py-typing
|
|
|
|
py-tzlocal
|
|
|
|
py-udunits
|
py-udunits: New package (#7998)
|
2018-05-05 17:33:44 -05:00 |
|
py-umi-tools
|
|
|
|
py-unittest2
|
|
|
|
py-unittest2py3k
|
|
|
|
py-urllib3
|
|
|
|
py-urwid
|
|
|
|
py-vcversioner
|
|
|
|
py-virtualenv
|
|
|
|
py-virtualenv-clone
|
|
|
|
py-virtualenvwrapper
|
|
|
|
py-vmd-python
|
|
|
|
py-vsc-base
|
|
|
|
py-vsc-install
|
|
|
|
py-wcsaxes
|
|
|
|
py-wcwidth
|
|
|
|
py-webkit-server
|
|
|
|
py-weblogo
|
new package: py-weblogo (#7886)
|
2018-04-24 19:31:37 -07:00 |
|
py-werkzeug
|
|
|
|
py-wheel
|
|
|
|
py-widgetsnbextension
|
|
|
|
py-wrapt
|
|
|
|
py-xarray
|
|
|
|
py-xattr
|
|
|
|
py-xlrd
|
|
|
|
py-xlsxwriter
|
|
|
|
py-xmlrunner
|
|
|
|
py-xopen
|
|
|
|
py-xpyb
|
|
|
|
py-xvfbwrapper
|
|
|
|
py-yamlreader
|
py-yamlreader: new package (#7997)
|
2018-05-03 16:58:40 -05:00 |
|
py-yapf
|
|
|
|
py-yt
|
|
|
|
py-zmq
|
|
|
|
python
|
make symlinking python3->python optional (#7960)
|
2018-05-02 12:26:30 -07:00 |
|
qbank
|
|
|
|
qbox
|
|
|
|
qhull
|
|
|
|
qmcpack
|
|
|
|
qmd-progress
|
|
|
|
qrupdate
|
|
|
|
qt
|
|
|
|
qt-creator
|
|
|
|
qtgraph
|
|
|
|
qthreads
|
|
|
|
quinoa
|
|
|
|
qwt
|
|
|
|
r
|
add versions 3.4.3. and 3.5.0 (#7929)
|
2018-04-26 21:12:17 -05:00 |
|
r-a4
|
|
|
|
r-a4base
|
|
|
|
r-a4classif
|
|
|
|
r-a4core
|
|
|
|
r-a4preproc
|
|
|
|
r-a4reporting
|
|
|
|
r-abadata
|
|
|
|
r-abaenrichment
|
|
|
|
r-abind
|
|
|
|
r-absseq
|
|
|
|
r-acde
|
|
|
|
r-acepack
|
|
|
|
r-acgh
|
|
|
|
r-acme
|
|
|
|
r-ada
|
|
|
|
r-adabag
|
|
|
|
r-ade4
|
|
|
|
r-adegenet
|
|
|
|
r-adsplit
|
|
|
|
r-affxparser
|
|
|
|
r-affy
|
|
|
|
r-affycomp
|
|
|
|
r-affycompatible
|
|
|
|
r-affycontam
|
|
|
|
r-affycoretools
|
|
|
|
r-affydata
|
|
|
|
r-affyexpress
|
|
|
|
r-affyilm
|
|
|
|
r-affyio
|
|
|
|
r-affypdnn
|
|
|
|
r-affyplm
|
|
|
|
r-affyqcreport
|
|
|
|
r-affyrnadegradation
|
|
|
|
r-agdex
|
|
|
|
r-agilp
|
|
|
|
r-agimicrorna
|
|
|
|
r-aims
|
|
|
|
r-aldex2
|
|
|
|
r-allelicimbalance
|
|
|
|
r-alpine
|
|
|
|
r-als
|
|
|
|
r-alsace
|
|
|
|
r-altcdfenvs
|
|
|
|
r-ampliqueso
|
|
|
|
r-analysispageserver
|
|
|
|
r-anaquin
|
|
|
|
r-aneufinder
|
|
|
|
r-aneufinderdata
|
|
|
|
r-annaffy
|
|
|
|
r-annotate
|
|
|
|
r-annotationdbi
|
|
|
|
r-annotationfilter
|
|
|
|
r-annotationforge
|
|
|
|
r-annotationhub
|
|
|
|
r-ape
|
|
|
|
r-assertthat
|
|
|
|
r-backports
|
|
|
|
r-bamsignals
|
|
|
|
r-base64
|
|
|
|
r-base64enc
|
|
|
|
r-bbmisc
|
Additional r packages (#7892)
|
2018-04-25 20:59:46 -05:00 |
|
r-beanplot
|
|
|
|
r-bh
|
|
|
|
r-bindr
|
|
|
|
r-bindrcpp
|
|
|
|
r-biobase
|
r-biobase: package update (#7785)
|
2018-04-17 10:04:24 -05:00 |
|
r-biocgenerics
|
r-biocgenerics: package update (#7778)
|
2018-04-17 07:43:26 -05:00 |
|
r-biocinstaller
|
|
|
|
r-biocparallel
|
|
|
|
r-biocstyle
|
|
|
|
r-biom-utils
|
py-mg-rast-tools: Create new package and its dependencies. (#7816)
|
2018-04-21 10:28:44 -05:00 |
|
r-biomart
|
r-biomart: package update (#7787)
|
2018-04-17 12:55:36 -05:00 |
|
r-biomformat
|
|
|
|
r-biostrings
|
|
|
|
r-biovizbase
|
|
|
|
r-bit
|
|
|
|
r-bit64
|
|
|
|
r-bitops
|
|
|
|
r-blob
|
|
|
|
r-bookdown
|
|
|
|
r-boot
|
|
|
|
r-brew
|
|
|
|
r-broom
|
|
|
|
r-bsgenome
|
r-bsgenome: package update (#7792)
|
2018-04-17 12:54:04 -05:00 |
|
r-bumphunter
|
|
|
|
r-c50
|
|
|
|
r-callr
|
|
|
|
r-car
|
|
|
|
r-caret
|
|
|
|
r-category
|
|
|
|
r-catools
|
|
|
|
r-cdcfluview
|
r-cdcfluview: new package (#8089)
|
2018-05-12 18:28:18 -05:00 |
|
r-cellranger
|
|
|
|
r-checkmate
|
|
|
|
r-checkpoint
|
|
|
|
r-chemometrics
|
|
|
|
r-chron
|
|
|
|
r-circlize
|
|
|
|
r-class
|
|
|
|
r-classint
|
|
|
|
r-cli
|
|
|
|
r-clipr
|
|
|
|
r-cluster
|
New package r-tmixclust (#7658)
|
2018-04-12 14:51:51 -05:00 |
|
r-clusterprofiler
|
|
|
|
r-cner
|
Fix www.example.com homepages (#7744)
|
2018-04-13 07:08:10 +02:00 |
|
r-coda
|
|
|
|
r-codetools
|
|
|
|
r-coin
|
|
|
|
r-colorspace
|
|
|
|
r-complexheatmap
|
|
|
|
r-corpcor
|
|
|
|
r-corrplot
|
|
|
|
r-covr
|
|
|
|
r-cowplot
|
|
|
|
r-crayon
|
|
|
|
r-crosstalk
|
|
|
|
r-cubature
|
|
|
|
r-cubist
|
|
|
|
r-curl
|
|
|
|
r-data-table
|
r-data-table: package update (#7768)
|
2018-04-16 10:14:20 -05:00 |
|
r-dbi
|
|
|
|
r-dbplyr
|
|
|
|
r-delayedarray
|
r-delayedarray: package update (#7788)
|
2018-04-17 12:55:20 -05:00 |
|
r-deldir
|
|
|
|
r-dendextend
|
|
|
|
r-deoptim
|
|
|
|
r-deoptimr
|
|
|
|
r-deseq
|
|
|
|
r-deseq2
|
r-deseq2: package update (#7770)
|
2018-04-16 10:13:45 -05:00 |
|
r-desolve
|
|
|
|
r-devtools
|
|
|
|
r-diagrammer
|
|
|
|
r-dicekriging
|
Additional r packages (#7892)
|
2018-04-25 20:59:46 -05:00 |
|
r-dichromat
|
|
|
|
r-diffusionmap
|
|
|
|
r-digest
|
|
|
|
r-diptest
|
|
|
|
r-dirichletmultinomial
|
|
|
|
r-dnacopy
|
|
|
|
r-do-db
|
|
|
|
r-domc
|
|
|
|
r-doparallel
|
|
|
|
r-dorng
|
|
|
|
r-dose
|
|
|
|
r-downloader
|
|
|
|
r-dplyr
|
|
|
|
r-dt
|
|
|
|
r-dtw
|
|
|
|
r-dygraphs
|
|
|
|
r-e1071
|
|
|
|
r-edger
|
|
|
|
r-ellipse
|
|
|
|
r-ensembldb
|
|
|
|
r-ergm
|
|
|
|
r-evaluate
|
|
|
|
r-expm
|
|
|
|
r-factoextra
|
|
|
|
r-factominer
|
|
|
|
r-fastmatch
|
|
|
|
r-ff
|
|
|
|
r-fftwtools
|
|
|
|
r-fgsea
|
|
|
|
r-filehash
|
|
|
|
r-flashclust
|
|
|
|
r-flexclust
|
|
|
|
r-flexmix
|
|
|
|
r-fnn
|
|
|
|
r-forcats
|
|
|
|
r-foreach
|
|
|
|
r-forecast
|
|
|
|
r-foreign
|
|
|
|
r-formatr
|
|
|
|
r-formula
|
|
|
|
r-fpc
|
|
|
|
r-fracdiff
|
|
|
|
r-futile-logger
|
|
|
|
r-futile-options
|
|
|
|
r-gbm
|
|
|
|
r-gcrma
|
|
|
|
r-gdata
|
|
|
|
r-gdsfmt
|
|
|
|
r-geiger
|
|
|
|
r-genefilter
|
|
|
|
r-geneplotter
|
|
|
|
r-genie3
|
r-genie3: new package (#8044)
|
2018-05-07 17:23:45 -05:00 |
|
r-genomeinfodb
|
r-genomeinfodb: package update (#7781)
|
2018-04-17 07:43:11 -05:00 |
|
r-genomeinfodbdata
|
Fix www.example.com homepages (#7744)
|
2018-04-13 07:08:10 +02:00 |
|
r-genomicalignments
|
r-genomicalignments: package update (#7791)
|
2018-04-17 12:54:36 -05:00 |
|
r-genomicfeatures
|
|
|
|
r-genomicranges
|
r-genomicranges: package update (#7782)
|
2018-04-17 09:33:24 -05:00 |
|
r-geomorph
|
|
|
|
r-geoquery
|
|
|
|
r-geosphere
|
|
|
|
r-getopt
|
|
|
|
r-getoptlong
|
|
|
|
r-ggally
|
|
|
|
r-ggbio
|
|
|
|
r-ggdendro
|
|
|
|
r-ggjoy
|
|
|
|
r-ggmap
|
|
|
|
r-ggplot2
|
|
|
|
r-ggpubr
|
|
|
|
r-ggrepel
|
|
|
|
r-ggridges
|
|
|
|
r-ggsci
|
|
|
|
r-ggvis
|
|
|
|
r-gistr
|
|
|
|
r-git2r
|
|
|
|
r-glmnet
|
|
|
|
r-globaloptions
|
|
|
|
r-glue
|
|
|
|
r-gmodels
|
|
|
|
r-gmp
|
|
|
|
r-go-db
|
|
|
|
r-googlevis
|
|
|
|
r-gosemsim
|
|
|
|
r-gostats
|
|
|
|
r-gplots
|
|
|
|
r-graph
|
|
|
|
r-gridbase
|
|
|
|
r-gridextra
|
|
|
|
r-gseabase
|
|
|
|
r-gss
|
|
|
|
r-gsubfn
|
|
|
|
r-gtable
|
|
|
|
r-gtools
|
|
|
|
r-gtrellis
|
|
|
|
r-gviz
|
|
|
|
r-haven
|
|
|
|
r-hexbin
|
|
|
|
r-highr
|
|
|
|
r-hmisc
|
r-hmisc: package update (#7766)
|
2018-04-16 10:16:00 -05:00 |
|
r-hms
|
|
|
|
r-htmltable
|
r-htmltable: package update (#7767)
|
2018-04-17 07:26:37 -05:00 |
|
r-htmltools
|
|
|
|
r-htmlwidgets
|
|
|
|
r-httpuv
|
|
|
|
r-httr
|
|
|
|
r-hwriter
|
|
|
|
r-hypergraph
|
|
|
|
r-ica
|
|
|
|
r-igraph
|
|
|
|
r-illuminaio
|
|
|
|
r-impute
|
|
|
|
r-influencer
|
|
|
|
r-inline
|
|
|
|
r-interactivedisplaybase
|
|
|
|
r-ipred
|
|
|
|
r-iranges
|
Package/r-iranges (#7780)
|
2018-04-17 09:36:12 -05:00 |
|
r-irdisplay
|
|
|
|
r-irkernel
|
|
|
|
r-irlba
|
|
|
|
r-iso
|
|
|
|
r-iterators
|
|
|
|
r-janitor
|
|
|
|
r-jaspar2018
|
|
|
|
r-jpeg
|
|
|
|
r-jsonlite
|
|
|
|
r-kegg-db
|
|
|
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r-kegggraph
|
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r-keggrest
|
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r-kernlab
|
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r-kernsmooth
|
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r-kknn
|
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r-knitr
|
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r-labeling
|
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r-lambda-r
|
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r-laplacesdemon
|
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r-lars
|
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r-lattice
|
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r-latticeextra
|
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r-lava
|
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r-lazyeval
|
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r-leaflet
|
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r-leaps
|
|
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r-learnbayes
|
|
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|
r-lhs
|
Additional r packages (#7892)
|
2018-04-25 20:59:46 -05:00 |
|
r-limma
|
r-limma: package update (#7763)
|
2018-04-16 11:49:40 -05:00 |
|
r-lme4
|
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|
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r-lmtest
|
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r-locfit
|
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r-log4r
|
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r-lpsolve
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r-lsei
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r-lubridate
|
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r-magic
|
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r-magrittr
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r-makecdfenv
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r-maldiquant
|
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r-mapproj
|
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r-maps
|
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r-maptools
|
|
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r-markdown
|
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r-mass
|
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r-matr
|
py-mg-rast-tools: Create new package and its dependencies. (#7816)
|
2018-04-21 10:28:44 -05:00 |
|
r-matrix
|
r-matrix: package update (#7769)
|
2018-04-16 10:14:00 -05:00 |
|
r-matrixmodels
|
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r-matrixstats
|
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r-mclust
|
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r-mcmcglmm
|
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r-mco
|
Additional r packages (#7892)
|
2018-04-25 20:59:46 -05:00 |
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r-mda
|
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r-memoise
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r-mergemaid
|
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r-methodss3
|
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r-mgcv
|
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r-mgraster
|
py-mg-rast-tools: Create new package and its dependencies. (#7816)
|
2018-04-21 10:28:44 -05:00 |
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r-mime
|
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r-minfi
|
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r-minqa
|
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r-misc3d
|
Additional r packages (#7892)
|
2018-04-25 20:59:46 -05:00 |
|
r-mixtools
|
|
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r-mlbench
|
|
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r-mlinterfaces
|
|
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r-mlr
|
Additional r packages (#7892)
|
2018-04-25 20:59:46 -05:00 |
|
r-mlrmbo
|
Additional r packages (#7892)
|
2018-04-25 20:59:46 -05:00 |
|
r-mmwrweek
|
r-mmwrweek: new pacakge (#8086)
|
2018-05-10 17:32:58 -05:00 |
|
r-mnormt
|
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r-modelmetrics
|
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r-modelr
|
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r-modeltools
|
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r-mpm
|
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r-msnbase
|
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r-multcomp
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r-multtest
|
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r-munsell
|
|
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r-mvtnorm
|
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r-mzid
|
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r-mzr
|
|
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r-nanotime
|
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r-ncbit
|
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r-ncdf4
|
|
|
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r-network
|
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r-networkd3
|
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r-nlme
|
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r-nloptr
|
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r-nmf
|
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r-nnet
|
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|
r-nnls
|
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r-nor1mix
|
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r-np
|
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r-numderiv
|
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r-oligoclasses
|
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r-oo
|
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r-openssl
|
|
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|
r-org-hs-eg-db
|
Fix www.example.com homepages (#7744)
|
2018-04-13 07:08:10 +02:00 |
|
r-organismdbi
|
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r-packrat
|
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r-pacman
|
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r-pamr
|
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r-parallelmap
|
Additional r packages (#7892)
|
2018-04-25 20:59:46 -05:00 |
|
r-paramhelpers
|
Additional r packages (#7892)
|
2018-04-25 20:59:46 -05:00 |
|
r-party
|
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r-partykit
|
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r-pathview
|
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r-pbapply
|
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r-pbdzmq
|
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r-pbkrtest
|
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r-pcamethods
|
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r-pcapp
|
|
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r-permute
|
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r-pfam-db
|
|
|
|
r-phangorn
|
Fix www.example.com homepages (#7744)
|
2018-04-13 07:08:10 +02:00 |
|
r-phantompeakqualtools
|
|
|
|
r-phyloseq
|
|
|
|
r-picante
|
r-picante: Create new package (#8117)
|
2018-05-14 13:00:03 -05:00 |
|
r-pkgconfig
|
|
|
|
r-pkgmaker
|
|
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|
r-plogr
|
|
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r-plot3d
|
Additional r packages (#7892)
|
2018-04-25 20:59:46 -05:00 |
|
r-plotly
|
|
|
|
r-plotrix
|
|
|
|
r-pls
|
|
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r-plyr
|
|
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r-pmcmr
|
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r-png
|
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r-powerlaw
|
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r-prabclus
|
|
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r-praise
|
|
|
|
r-preprocesscore
|
|
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r-prettyunits
|
|
|
|
r-prodlim
|
|
|
|
r-progress
|
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|
r-protgenerics
|
|
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|
r-proto
|
|
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|
r-proxy
|
|
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|
r-pryr
|
|
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|
r-psych
|
|
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|
r-ptw
|
|
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r-purrr
|
|
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|
r-quadprog
|
|
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r-quantmod
|
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r-quantreg
|
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r-quantro
|
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r-qvalue
|
|
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r-r6
|
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r-randomforest
|
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|
r-ranger
|
|
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|
r-rappdirs
|
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|
r-raster
|
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|
r-rbgl
|
|
|
|
r-rbokeh
|
|
|
|
r-rcolorbrewer
|
|
|
|
r-rcpp
|
Bump r-rcpp versions. (#8016)
|
2018-05-03 22:54:45 -05:00 |
|
r-rcpparmadillo
|
|
|
|
r-rcppblaze
|
|
|
|
r-rcppcctz
|
|
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|
r-rcppeigen
|
|
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|
r-rcppprogress
|
|
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|
r-rcurl
|
|
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|
r-rda
|
|
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|
r-readr
|
|
|
|
r-readxl
|
|
|
|
r-registry
|
|
|
|
r-rematch
|
|
|
|
r-reordercluster
|
|
|
|
r-reportingtools
|
|
|
|
r-repr
|
|
|
|
r-reprex
|
|
|
|
r-reshape
|
|
|
|
r-reshape2
|
|
|
|
r-rex
|
|
|
|
r-rgdal
|
|
|
|
r-rgenoud
|
Additional r packages (#7892)
|
2018-04-25 20:59:46 -05:00 |
|
r-rgeos
|
|
|
|
r-rgl
|
|
|
|
r-rgooglemaps
|
|
|
|
r-rgraphviz
|
|
|
|
r-rhdf5
|
|
|
|
r-rhtslib
|
|
|
|
r-rinside
|
Additional r packages (#7892)
|
2018-04-25 20:59:46 -05:00 |
|
r-rjags
|
|
|
|
r-rjava
|
|
|
|
r-rjson
|
|
|
|
r-rjsonio
|
|
|
|
r-rlang
|
|
|
|
r-rmarkdown
|
|
|
|
r-rminer
|
|
|
|
r-rmpfr
|
|
|
|
r-rmpi
|
|
|
|
r-rmysql
|
|
|
|
r-rngtools
|
|
|
|
r-robustbase
|
|
|
|
r-rocr
|
|
|
|
r-rodbc
|
|
|
|
r-roxygen2
|
|
|
|
r-rpart
|
|
|
|
r-rpart-plot
|
|
|
|
r-rpostgresql
|
|
|
|
r-rprojroot
|
|
|
|
r-rsamtools
|
|
|
|
r-rsnns
|
|
|
|
r-rsolnp
|
New package r-spem (#7657)
|
2018-04-12 12:55:10 -05:00 |
|
r-rsqlite
|
|
|
|
r-rstan
|
|
|
|
r-rstudioapi
|
|
|
|
r-rtracklayer
|
|
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|
r-rtsne
|
|
|
|
r-rvcheck
|
|
|
|
r-rvest
|
|
|
|
r-rzmq
|
|
|
|
r-s4vectors
|
r-s4vectors: package update (#7779)
|
2018-04-17 10:04:37 -05:00 |
|
r-samr
|
|
|
|
r-sandwich
|
|
|
|
r-scales
|
|
|
|
r-scatterplot3d
|
|
|
|
r-sdmtools
|
|
|
|
r-segmented
|
|
|
|
r-selectr
|
|
|
|
r-seqinr
|
|
|
|
r-seqlogo
|
|
|
|
r-seurat
|
|
|
|
r-sf
|
|
|
|
r-sfsmisc
|
|
|
|
r-shape
|
|
|
|
r-shiny
|
|
|
|
r-shortread
|
|
|
|
r-siggenes
|
|
|
|
r-simpleaffy
|
|
|
|
r-smoof
|
Additional r packages (#7892)
|
2018-04-25 20:59:46 -05:00 |
|
r-sn
|
|
|
|
r-snow
|
|
|
|
r-snowfall
|
|
|
|
r-snprelate
|
|
|
|
r-som
|
|
|
|
r-somaticsignatures
|
|
|
|
r-sourcetools
|
|
|
|
r-sp
|
|
|
|
r-sparsem
|
|
|
|
r-spdep
|
|
|
|
r-speedglm
|
|
|
|
r-spem
|
New package r-spem (#7657)
|
2018-04-12 12:55:10 -05:00 |
|
r-sqldf
|
|
|
|
r-squash
|
r-squash: Create new package (#8118)
|
2018-05-14 12:59:49 -05:00 |
|
r-stanheaders
|
|
|
|
r-statmod
|
|
|
|
r-statnet-common
|
|
|
|
r-stringi
|
|
|
|
r-stringr
|
|
|
|
r-strucchange
|
|
|
|
r-subplex
|
|
|
|
r-summarizedexperiment
|
r-summarizedexperiment: package update (#7790)
|
2018-04-17 12:54:56 -05:00 |
|
r-survey
|
|
|
|
r-survival
|
|
|
|
r-sva
|
|
|
|
r-tarifx
|
|
|
|
r-tclust
|
|
|
|
r-tensora
|
|
|
|
r-testit
|
|
|
|
r-testthat
|
|
|
|
r-tfbstools
|
|
|
|
r-tfmpvalue
|
|
|
|
r-th-data
|
|
|
|
r-threejs
|
|
|
|
r-tibble
|
|
|
|
r-tidycensus
|
|
|
|
r-tidyr
|
|
|
|
r-tidyselect
|
|
|
|
r-tidyverse
|
|
|
|
r-tiff
|
|
|
|
r-tigris
|
|
|
|
r-timedate
|
|
|
|
r-tmixclust
|
New package r-tmixclust (#7658)
|
2018-04-12 14:51:51 -05:00 |
|
r-topgo
|
r-topgo: package update (#7793)
|
2018-04-17 12:53:37 -05:00 |
|
r-trimcluster
|
|
|
|
r-truncnorm
|
New package r-spem (#7657)
|
2018-04-12 12:55:10 -05:00 |
|
r-trust
|
|
|
|
r-tseries
|
|
|
|
r-tsne
|
|
|
|
r-ttr
|
|
|
|
r-udunits2
|
|
|
|
r-units
|
|
|
|
r-utils
|
|
|
|
r-uuid
|
|
|
|
r-variantannotation
|
|
|
|
r-varselrf
|
|
|
|
r-vcd
|
|
|
|
r-vegan
|
|
|
|
r-vgam
|
|
|
|
r-viridis
|
|
|
|
r-viridislite
|
|
|
|
r-visnetwork
|
|
|
|
r-vsn
|
|
|
|
r-whisker
|
|
|
|
r-withr
|
|
|
|
r-xde
|
|
|
|
r-xgboost
|
|
|
|
r-xlconnect
|
|
|
|
r-xlconnectjars
|
|
|
|
r-xlsx
|
|
|
|
r-xlsxjars
|
|
|
|
r-xmapbridge
|
|
|
|
r-xml
|
|
|
|
r-xml2
|
|
|
|
r-xtable
|
|
|
|
r-xts
|
|
|
|
r-xvector
|
|
|
|
r-yaml
|
|
|
|
r-yapsa
|
|
|
|
r-yaqcaffy
|
|
|
|
r-yarn
|
Fix www.example.com homepages (#7744)
|
2018-04-13 07:08:10 +02:00 |
|
r-zlibbioc
|
|
|
|
r-zoo
|
|
|
|
racon
|
new package: racon (bioinformatics) (#7726)
|
2018-04-22 07:54:48 -05:00 |
|
raft
|
|
|
|
ragel
|
New colm, ragel packages (#7867)
|
2018-04-23 10:50:58 -05:00 |
|
raja
|
|
|
|
randfold
|
|
|
|
random123
|
|
|
|
randrproto
|
|
|
|
rapidjson
|
|
|
|
ravel
|
|
|
|
raxml
|
|
|
|
ray
|
|
|
|
rdma-core
|
rdma-core: new package (#7835)
|
2018-04-25 10:33:30 -05:00 |
|
rdp-classifier
|
|
|
|
re2c
|
|
|
|
readfq
|
readfq: Create new package. (#7673)
|
2018-04-05 17:23:25 -05:00 |
|
readline
|
|
|
|
recordproto
|
|
|
|
redundans
|
|
|
|
relion
|
|
|
|
rempi
|
|
|
|
rename
|
|
|
|
rendercheck
|
|
|
|
renderproto
|
|
|
|
repeatmasker
|
|
|
|
resourceproto
|
|
|
|
revbayes
|
|
|
|
rgb
|
|
|
|
rhash
|
|
|
|
rlwrap
|
|
|
|
rmlab
|
|
|
|
rna-seqc
|
|
|
|
rockstar
|
|
|
|
root
|
|
|
|
rose
|
|
|
|
rr
|
|
|
|
rsbench
|
|
|
|
rsem
|
|
|
|
rstart
|
|
|
|
rsync
|
rsync: adding version 3.1.3 (#7669)
|
2018-04-04 18:13:50 -05:00 |
|
rtags
|
|
|
|
rtax
|
|
|
|
ruby
|
|
|
|
ruby-gnuplot
|
|
|
|
ruby-narray
|
|
|
|
ruby-ronn
|
Package/geopm (#7560)
|
2018-04-17 07:51:56 -05:00 |
|
ruby-rubyinline
|
|
|
|
ruby-svn2git
|
New Package: ruby-svn2git (#7979)
|
2018-05-03 10:12:57 -05:00 |
|
ruby-terminal-table
|
|
|
|
rust
|
|
|
|
rust-bindgen
|
|
|
|
sabre
|
|
|
|
sailfish
|
|
|
|
salmon
|
|
|
|
sambamba
|
|
|
|
samblaster
|
|
|
|
samrai
|
|
|
|
samtools
|
Bump samtools, hstlib and bcftools to version 1.8. (#8020)
|
2018-05-04 16:27:54 -05:00 |
|
sandbox
|
|
|
|
sas
|
|
|
|
satsuma2
|
|
|
|
savanna
|
|
|
|
saws
|
|
|
|
sbt
|
|
|
|
scala
|
Added the latest versions of a few packages (#7910)
|
2018-04-26 14:46:45 +02:00 |
|
scalasca
|
|
|
|
scalpel
|
|
|
|
scan-for-matches
|
|
|
|
scons
|
|
|
|
scorec-core
|
|
|
|
scorep
|
|
|
|
scotch
|
|
|
|
scr
|
|
|
|
screen
|
|
|
|
scripts
|
|
|
|
scrnsaverproto
|
|
|
|
sctk
|
|
|
|
sdl2
|
|
|
|
sdl2-image
|
|
|
|
sed
|
|
|
|
seqan
|
|
|
|
seqprep
|
|
|
|
seqtk
|
|
|
|
serf
|
Package 'serf': link to the spack provided zlib installation. (#7667)
|
2018-04-06 15:44:39 -05:00 |
|
sessreg
|
|
|
|
setxkbmap
|
|
|
|
sga
|
|
|
|
shapeit
|
|
|
|
shared-mime-info
|
added shared-mime-info version 1.9 (#8063)
|
2018-05-08 17:52:02 -05:00 |
|
shiny-server
|
|
|
|
shocklibs
|
py-mg-rast-tools: Create new package and its dependencies. (#7816)
|
2018-04-21 10:28:44 -05:00 |
|
shoremap
|
shoremap: new package (#7343)
|
2018-05-12 08:22:45 +02:00 |
|
shortbred
|
|
|
|
shortstack
|
|
|
|
showfont
|
|
|
|
sickle
|
|
|
|
siesta
|
|
|
|
signalp
|
|
|
|
signify
|
|
|
|
silo
|
|
|
|
simplemoc
|
|
|
|
simul
|
|
|
|
simulationio
|
|
|
|
singularity
|
|
|
|
slepc
|
petsc and slepc: add 3.9.0; hypre: add 2.14 (needed by petsc) (#7877)
|
2018-04-24 07:10:46 -05:00 |
|
slurm
|
|
|
|
smalt
|
|
|
|
smproxy
|
|
|
|
snakemake
|
|
|
|
snap
|
|
|
|
snap-berkeley
|
|
|
|
snap-korf
|
|
|
|
snappy
|
|
|
|
snbone
|
|
|
|
sniffles
|
|
|
|
snpeff
|
|
|
|
snphylo
|
|
|
|
snptest
|
|
|
|
soap2
|
|
|
|
soapdenovo2
|
|
|
|
soapdenovo-trans
|
soapdenovo-trans: Create new package. (#7649)
|
2018-04-03 17:46:25 -05:00 |
|
soapindel
|
|
|
|
soapsnp
|
|
|
|
sofa-c
|
|
|
|
somatic-sniper
|
|
|
|
sortmerna
|
|
|
|
sosflow
|
|
|
|
sowing
|
|
|
|
sox
|
|
|
|
spades
|
|
|
|
spark
|
Added the latest versions of a few packages (#7910)
|
2018-04-26 14:46:45 +02:00 |
|
sparsehash
|
|
|
|
sparta
|
|
|
|
spdlog
|
|
|
|
spectrum-mpi
|
Fix Spectrum MPI package spec file for PGI compilers (#7964)
|
2018-05-02 08:12:08 -05:00 |
|
speex
|
|
|
|
spglib
|
|
|
|
sph2pipe
|
|
|
|
spherepack
|
|
|
|
spindle
|
|
|
|
spot
|
|
|
|
sqlite
|
|
|
|
squid
|
|
|
|
sra-toolkit
|
|
|
|
sspace-longread
|
|
|
|
sspace-standard
|
|
|
|
sst-dumpi
|
|
|
|
sst-macro
|
|
|
|
stacks
|
|
|
|
staden-io-lib
|
|
|
|
star
|
|
|
|
star-ccm-plus
|
|
|
|
startup-notification
|
|
|
|
stat
|
added stat version 4.0.0 (#8062)
|
2018-05-08 17:52:38 -05:00 |
|
stc
|
|
|
|
stow
|
|
|
|
strace
|
|
|
|
stream
|
|
|
|
strelka
|
|
|
|
stress
|
|
|
|
stringtie
|
|
|
|
structure
|
|
|
|
sublime-text
|
|
|
|
subread
|
|
|
|
subversion
|
|
|
|
suite-sparse
|
Suite-sparse: provide patch to fix builts with clang@6.0.0. (#7811)
|
2018-04-19 08:59:55 -05:00 |
|
sumaclust
|
|
|
|
sundials
|
Add new Sundials versions (#8075)
|
2018-05-09 20:53:25 -05:00 |
|
superlu
|
|
|
|
superlu-dist
|
|
|
|
superlu-mt
|
|
|
|
supernova
|
supernova: new package (#7719)
|
2018-04-12 13:31:18 -05:00 |
|
sw4lite
|
|
|
|
swarm
|
|
|
|
swfft
|
Use GitLab's API endpoint for fetching a git snapshot. (#7881)
|
2018-04-26 16:40:11 -05:00 |
|
swiftsim
|
adds new version to swiftsim (#8093)
|
2018-05-11 10:32:30 -05:00 |
|
swig
|
|
|
|
symengine
|
|
|
|
sympol
|
|
|
|
sz
|
ADIOS 1.13.1 & SZ 1.4.12.3 (#7808)
|
2018-04-18 10:52:13 -05:00 |
|
tabix
|
|
|
|
talloc
|
|
|
|
tantan
|
|
|
|
tar
|
Added the latest versions of a few packages (#7910)
|
2018-04-26 14:46:45 +02:00 |
|
targetp
|
|
|
|
task
|
|
|
|
taskd
|
|
|
|
tasmanian
|
|
|
|
tassel
|
|
|
|
tau
|
|
|
|
tcl
|
tcl: Add version 8.6.8 (#7756)
|
2018-04-13 16:58:25 -05:00 |
|
tcl-tcllib
|
|
|
|
tcl-tclxml
|
|
|
|
tclap
|
|
|
|
tcoffee
|
|
|
|
tcptrace
|
|
|
|
tcsh
|
|
|
|
tealeaf
|
|
|
|
tetgen
|
|
|
|
tethex
|
|
|
|
texinfo
|
|
|
|
texlive
|
Create custom PATH that texlive requires in its module. (#8064)
|
2018-05-12 18:40:36 -05:00 |
|
the-platinum-searcher
|
|
|
|
the-silver-searcher
|
|
|
|
thrift
|
|
|
|
thrust
|
|
|
|
tig
|
|
|
|
tinyxml
|
Build shared libs for tinyxml. (#7914)
|
2018-04-30 10:03:24 -05:00 |
|
tinyxml2
|
|
|
|
tioga
|
|
|
|
tk
|
tk: Add version 8.6.8 (#7757)
|
2018-04-13 16:58:13 -05:00 |
|
tmalign
|
|
|
|
tmhmm
|
|
|
|
tmux
|
Added the latest versions of a few packages (#7910)
|
2018-04-26 14:46:45 +02:00 |
|
tmuxinator
|
|
|
|
tophat
|
|
|
|
tppred
|
|
|
|
transabyss
|
|
|
|
transdecoder
|
|
|
|
transposome
|
|
|
|
transset
|
|
|
|
trapproto
|
|
|
|
tree
|
|
|
|
trf
|
|
|
|
triangle
|
|
|
|
trilinos
|
trilinos: minor cleanup (#7987)
|
2018-05-07 06:45:49 -05:00 |
|
trimgalore
|
|
|
|
trimmomatic
|
|
|
|
trinity
|
Add Trinity package (#7828)
|
2018-04-26 09:11:58 -05:00 |
|
trnascan-se
|
|
|
|
turbine
|
|
|
|
turbomole
|
|
|
|
tut
|
|
|
|
twm
|
|
|
|
tycho2
|
|
|
|
typhon
|
Added BookLeaf_Cpp and Typhon packages. (#7969)
|
2018-05-02 10:45:30 -05:00 |
|
typhonio
|
|
|
|
uberftp
|
|
|
|
ucx
|
ucx: needs numactl and rdma-core (#7836)
|
2018-04-25 10:34:55 -05:00 |
|
udunits2
|
|
|
|
ufo-core
|
|
|
|
ufo-filters
|
|
|
|
unblur
|
|
|
|
uncrustify
|
|
|
|
unibilium
|
|
|
|
unison
|
|
|
|
units
|
|
|
|
unixodbc
|
|
|
|
unzip
|
|
|
|
usearch
|
|
|
|
util-linux
|
|
|
|
util-macros
|
|
|
|
uuid
|
|
|
|
valgrind
|
|
|
|
vampirtrace
|
|
|
|
vardictjava
|
|
|
|
varscan
|
|
|
|
vc
|
|
|
|
vcftools
|
|
|
|
vcsh
|
|
|
|
vdt
|
|
|
|
vecgeom
|
Use GitLab's API endpoint for fetching a git snapshot. (#7881)
|
2018-04-26 16:40:11 -05:00 |
|
veclibfort
|
|
|
|
vegas2
|
|
|
|
velvet
|
|
|
|
verilator
|
|
|
|
videoproto
|
|
|
|
viennarna
|
|
|
|
viewres
|
|
|
|
vim
|
|
|
|
virtualgl
|
|
|
|
visit
|
|
|
|
vizglow
|
|
|
|
vmatch
|
|
|
|
voropp
|
|
|
|
votca-csg
|
|
|
|
votca-ctp
|
votca-moo: removal (#7762)
|
2018-04-14 16:18:11 -06:00 |
|
votca-tools
|
|
|
|
votca-xtp
|
votca-moo: removal (#7762)
|
2018-04-14 16:18:11 -06:00 |
|
vpfft
|
|
|
|
vpic
|
|
|
|
vsearch
|
|
|
|
vt
|
vt: Create new package (#7947)
|
2018-04-30 12:11:06 -05:00 |
|
vtk
|
|
|
|
vtkh
|
|
|
|
vtkm
|
Use GitLab's API endpoint for fetching a git snapshot. (#7881)
|
2018-04-26 16:40:11 -05:00 |
|
wannier90
|
|
|
|
wcslib
|
|
|
|
wget
|
|
|
|
wgsim
|
wgsim: Create new package. (#7674)
|
2018-04-09 14:23:11 -05:00 |
|
windowswmproto
|
|
|
|
wireshark
|
wireshark: stop cmake from picking up /usr paths (#8053)
|
2018-05-10 06:58:43 -05:00 |
|
wt
|
|
|
|
wx
|
|
|
|
wxpropgrid
|
|
|
|
x11perf
|
|
|
|
xapian-core
|
|
|
|
xauth
|
|
|
|
xbacklight
|
|
|
|
xbiff
|
|
|
|
xbitmaps
|
|
|
|
xbraid
|
|
|
|
xcalc
|
|
|
|
xcb-demo
|
|
|
|
xcb-proto
|
Add latest versions of libxcb and xcb-proto (#7650)
|
2018-04-10 11:47:02 -05:00 |
|
xcb-util
|
|
|
|
xcb-util-cursor
|
|
|
|
xcb-util-errors
|
|
|
|
xcb-util-image
|
|
|
|
xcb-util-keysyms
|
|
|
|
xcb-util-renderutil
|
|
|
|
xcb-util-wm
|
|
|
|
xcb-util-xrm
|
|
|
|
xclip
|
|
|
|
xclipboard
|
|
|
|
xclock
|
|
|
|
xcmiscproto
|
|
|
|
xcmsdb
|
|
|
|
xcompmgr
|
|
|
|
xconsole
|
|
|
|
xcursor-themes
|
|
|
|
xcursorgen
|
|
|
|
xdbedizzy
|
|
|
|
xditview
|
|
|
|
xdm
|
|
|
|
xdpyinfo
|
|
|
|
xdriinfo
|
|
|
|
xedit
|
|
|
|
xerces-c
|
Fix build of xerces-c (#7611)
|
2018-04-06 15:46:47 -05:00 |
|
xev
|
|
|
|
xextproto
|
|
|
|
xeyes
|
|
|
|
xf86bigfontproto
|
|
|
|
xf86dga
|
|
|
|
xf86dgaproto
|
|
|
|
xf86driproto
|
|
|
|
xf86miscproto
|
|
|
|
xf86rushproto
|
|
|
|
xf86vidmodeproto
|
|
|
|
xfd
|
|
|
|
xfindproxy
|
|
|
|
xfontsel
|
|
|
|
xfs
|
|
|
|
xfsinfo
|
|
|
|
xfwp
|
|
|
|
xgamma
|
|
|
|
xgc
|
|
|
|
xhost
|
|
|
|
xineramaproto
|
|
|
|
xinit
|
|
|
|
xinput
|
|
|
|
xios
|
|
|
|
xkbcomp
|
|
|
|
xkbdata
|
|
|
|
xkbevd
|
|
|
|
xkbprint
|
|
|
|
xkbutils
|
|
|
|
xkeyboard-config
|
|
|
|
xkill
|
|
|
|
xload
|
|
|
|
xlogo
|
|
|
|
xlsatoms
|
|
|
|
xlsclients
|
|
|
|
xlsfonts
|
|
|
|
xmag
|
|
|
|
xman
|
|
|
|
xmessage
|
|
|
|
xmh
|
|
|
|
xmlf90
|
|
|
|
xmlto
|
|
|
|
xmodmap
|
|
|
|
xmore
|
|
|
|
xorg-cf-files
|
|
|
|
xorg-docs
|
|
|
|
xorg-gtest
|
|
|
|
xorg-server
|
|
|
|
xorg-sgml-doctools
|
|
|
|
xphelloworld
|
|
|
|
xplor-nih
|
|
|
|
xplsprinters
|
|
|
|
xpr
|
|
|
|
xprehashprinterlist
|
|
|
|
xprop
|
|
|
|
xproto
|
|
|
|
xproxymanagementprotocol
|
|
|
|
xqilla
|
|
|
|
xrandr
|
xrandr: needs randrproto (#7814)
|
2018-04-18 14:02:04 -05:00 |
|
xrdb
|
|
|
|
xrefresh
|
|
|
|
xrootd
|
Update with recent versions through 4.8.3 and add variants. (#7933)
|
2018-04-27 10:11:33 -05:00 |
|
xrx
|
|
|
|
xsbench
|
|
|
|
xscope
|
|
|
|
xsdk
|
|
|
|
xsdktrilinos
|
|
|
|
xset
|
|
|
|
xsetmode
|
|
|
|
xsetpointer
|
|
|
|
xsetroot
|
|
|
|
xsimd
|
|
|
|
xsm
|
|
|
|
xstdcmap
|
|
|
|
xtensor
|
|
|
|
xtensor-python
|
|
|
|
xterm
|
|
|
|
xtl
|
|
|
|
xtrans
|
|
|
|
xtrap
|
|
|
|
xts
|
|
|
|
xvidtune
|
|
|
|
xvinfo
|
|
|
|
xwd
|
|
|
|
xwininfo
|
|
|
|
xwud
|
|
|
|
xz
|
|
|
|
yajl
|
|
|
|
yambo
|
|
|
|
yaml-cpp
|
add version 0.6.2 to yaml-cpp (#7931)
|
2018-05-14 10:44:27 +02:00 |
|
yasm
|
|
|
|
yorick
|
|
|
|
z3
|
|
|
|
zeromq
|
|
|
|
zfp
|
|
|
|
zip
|
|
|
|
zlib
|
|
|
|
zoltan
|
|
|
|
zsh
|
|
|
|
zstd
|
|
|
