spack/var/spack/repos/builtin/packages/allpaths-lg/package.py
Todd Gamblin a8ccb8e116 copyrights: update all files with license headers for 2021
- [x] add `concretize.lp`, `spack.yaml`, etc. to licensed files
- [x] update all licensed files to say 2013-2021 using
      `spack license update-copyright-year`
- [x] appease mypy with some additions to package.py that needed
      for oneapi.py
2021-01-02 12:12:00 -08:00

28 lines
939 B
Python

# Copyright 2013-2021 Lawrence Livermore National Security, LLC and other
# Spack Project Developers. See the top-level COPYRIGHT file for details.
#
# SPDX-License-Identifier: (Apache-2.0 OR MIT)
from spack import *
class AllpathsLg(AutotoolsPackage):
"""ALLPATHS-LG is our original short read assembler and it works on both
small and large (mammalian size) genomes."""
homepage = "http://www.broadinstitute.org/software/allpaths-lg/blog/"
url = "ftp://ftp.broadinstitute.org/pub/crd/ALLPATHS/Release-LG/latest_source_code/allpathslg-52488.tar.gz"
version('52488', sha256='035b49cb21b871a6b111976757d7aee9c2513dd51af04678f33375e620998542')
# compiles with gcc 4.7.0 to 4.9.4)
conflicts('%gcc@:4.6.4,5.1.0:')
conflicts('%cce')
conflicts('%apple-clang')
conflicts('%clang')
conflicts('%intel')
conflicts('%nag')
conflicts('%pgi')
conflicts('%xl')
conflicts('%xl_r')