Massimiliano Culpo 2cd800306d fftw: simplify the recipe and make use of specific targets (#12889) ... * fftw: grouped precisions in a single variant * fftw: simd options are now based on target features and not on variants * fftw: simplified computing the selected precisions		2019-10-03 22:32:42 -05:00
..
abinit
abyss	flake8: make entire repository pass spack flake8 -a	2019-09-07 23:59:10 -07:00
accfft
ack
activeharmony
acts-core
adept-utils
adios	ZFP: CMake Package (#12999)	2019-10-01 23:28:36 -07:00
adios2	ZFP: CMake Package (#12999)	2019-10-01 23:28:36 -07:00
adlbx
adol-c
aegean
aida
alan
albany
albert
alglib
allinea-reports
allpaths-lg
alquimia
alsa-lib
aluminum
amber
amg
amg2013
aml
amp
ampliconnoise
amrex
amrvis
andi
angsd
ant
antlr
ants	ants: missing zlib dependency and fix working directory in install. (#13010)	2019-10-02 11:58:25 -05:00
aoflagger
aom
ape
aperture-photometry
apex
apple-libunwind
applewmproto
appres
apr
apr-util
aragorn
arborx
archer
argobots
argp-standalone
argtable
aria2
arlecore
arm-forge
armadillo
arpack-ng
arrow
asagi
ascent
asciidoc
asciidoctor
aspa
aspcud
aspect
aspell
aspell6-de
aspell6-en
aspell6-es
aspera-cli
assimp
astra
astral
astyle
at-spi2-atk
at-spi2-core
athena	flake8: make entire repository pass spack flake8 -a	2019-09-07 23:59:10 -07:00
atk
atlas	flake8: make entire repository pass spack flake8 -a	2019-09-07 23:59:10 -07:00
atom-dft
atompaw
atop
attr
augustus	Fixes for augustus package	2019-09-13 19:07:35 -07:00
autoconf
autodock-vina
autofact
autogen
automaded
automake
awscli
axel
axl
bamdst
bamtools
bamutil
barrnap
bash
bash-completion
bats
bazel
bbcp
bbmap	update bbmap (#12721)	2019-09-09 12:55:06 -05:00
bc
bcftools
bcl2fastq2
bdftopcf
bdw-gc
bear
beast1
beast2
beast-tracer
bedops
bedtools2
beforelight
benchmark
berkeley-db
bertini
bib2xhtml
bigreqsproto
binutils	binutils: fix undefined symbol libintl_dgettext (#12770)	2019-09-09 11:05:04 -05:00
bioawk
biobloom
biopieces
bismark
bison
bitmap
blasr	flake8: make entire repository pass spack flake8 -a	2019-09-07 23:59:10 -07:00
blasr-libcpp
blast2go
blast-legacy
blast-plus	Update target comparison semantic for a few packages (#12947)	2019-09-26 10:25:12 +02:00
blat
blaze
blis	Fix installation permissions on BLIS and libflame libs (#12919)	2019-09-23 18:54:47 -05:00
bliss
blitz
bmake
bmi
bml
bohrium
bolt	bolt: add a new version, 1.0rc2 (#12966)	2019-09-28 13:27:33 -05:00
bookleaf-cpp
boost	boost: Use gcc toolset for bootstrap with Fujitsu compiler. (#12876)	2019-10-03 22:20:55 -05:00
boostmplcartesianproduct
bowtie	bowtie: fix for aarch64, and bugfix about c++11-narrowing. (#12953)	2019-09-28 13:44:02 -05:00
bowtie2	targets: adjust packages to use new specific targets semantics	2019-09-20 00:51:37 -07:00
boxlib	flake8: make entire repository pass spack flake8 -a	2019-09-07 23:59:10 -07:00
bpp-core
bpp-phyl
bpp-seq
bpp-suite
bracken
braker	Add diamond dependency	2019-09-13 19:08:57 -07:00
branson
breakdancer	breakdancer: missing ncurses dependency. (#13011)	2019-10-02 11:57:05 -05:00
breseq	breseq: fix dependency and limit compiler version. (#13013)	2019-10-02 11:56:37 -05:00
bridger
brigand
brotli
bsseeker2
bucky
bumpversion
busco
butter
butterflypack	butterflypack package: add version 1.0.3 (#12927)	2019-09-25 19:16:47 -07:00
bwa
bwtool
byobu
bzip2
c-blosc
c-blosc2	flake8: make entire repository pass spack flake8 -a	2019-09-07 23:59:10 -07:00
c-lime
cabana
caffe
cairo
cairomm
caliper
callpath
camellia
camx
candle-benchmarks
cantera
canu
cap3
capstone
cardioid	flake8: make entire repository pass spack flake8 -a	2019-09-07 23:59:10 -07:00
cares
casacore
cask
casper
catalyst	Update target comparison semantic for a few packages (#12947)	2019-09-26 10:25:12 +02:00
catch
cbench
cblas
cbtf
cbtf-argonavis
cbtf-argonavis-gui
cbtf-krell	targets: adjust packages to use new specific targets semantics	2019-09-20 00:51:37 -07:00
cbtf-lanl
ccache
ccfits
ccs-qcd	ccs-qcd: disable parallel builds (#12775)	2019-09-10 14:19:09 +02:00
cctools	Update cctools to v7.0.18 (#13037)	2019-10-03 18:57:20 -05:00
cdbfasta
cdd
cddlib
cdecimal
cdhit	cdhit: add zlib dependency. (#13015)	2019-10-02 12:55:05 -05:00
cdo
ceed
cereal
ceres-solver
cfitsio
cgal
cgdb
cgm	flake8: make entire repository pass spack flake8 -a	2019-09-07 23:59:10 -07:00
cgns	CGNS: Add setting of RPATH on Darwin (#9984)	2019-09-08 17:14:56 -05:00
channelflow
chapel	Update chapel to current (1.19 -> 1.20) (#12991)	2019-10-01 11:47:57 -05:00
charliecloud	charliecloud package: add version 0.11 and test dependency (#12861)	2019-09-20 18:01:40 -07:00
charmpp
chatterbug
check
chill
chlorop
chombo	flake8: make entire repository pass spack flake8 -a	2019-09-07 23:59:10 -07:00
chrpath
cinch
circos
cistem
citcoms
cityhash
clamav
clamr
clapack
claw	CLAW Compiler: added version 2.0.1 (#12878)	2019-09-19 18:27:22 +02:00
cleaveland4
cleverleaf
clfft
clhep
clingo
cln
cloc
cloog
cloverleaf
cloverleaf3d
clp
clustalo
clustalw
cmake	cmake: add v3.15.{2,3} (#12847)	2019-09-17 13:13:39 -06:00
cmocka
cmor
cnmem
cnpy	cnpy: add zlib dependency. (#13016)	2019-10-02 12:54:31 -05:00
cntk
cntk1bitsgd
cnvnator
codar-cheetah
codes
coevp
cohmm
coinhsl
colm
colordiff
comd
commons-lang
commons-lang3
commons-logging
compiz
compositeproto
conduit
connect-proxy
constype
converge
coreutils
corset
cosmomc
cosp2
cotter
cowsay
cp2k	libint + cp2k: 2-stage build with 'tune' and 'fortran' variants (#12475)	2019-10-02 21:31:19 +02:00
cppad
cppcheck
cppgsl
cpprestsdk
cppunit
cppzmq
cpu-features
cpuinfo
cquery
cram
cromwell
cromwell-womtool
cryptopp
cryptsetup	cryptsetup package: dont vendor libuuid in util-linux (#12839)	2019-09-17 11:22:10 -07:00
cscope
csdp
ctffind
cub
cube
cubelib
cubew
cuda	cuda: New version 10.1.243 (#12777)	2019-09-10 10:52:55 -07:00
cuda-memtest
cudnn	targets: adjust packages to use new specific targets semantics	2019-09-20 00:51:37 -07:00
cufflinks
cups
curl
cvs
czmq	czmq package: add autoreconf stage (#12846)	2019-09-20 18:14:41 -07:00
dakota
daligner
damageproto
damaris
damselfly
darshan-runtime
darshan-util
dash
datamash
dataspaces	Dataspaces: Fix Fetch URL, Savanna Spec (#13001)	2019-10-01 14:52:44 -07:00
dateutils
davix
dbcsr
dbus
dcmtk
dd4hep
dealii	Removed references to '(-march|-mtune|-mcpu)=native' (#12948)	2019-09-26 10:02:08 +02:00
dealii-parameter-gui
deconseq-standalone
dejagnu
delly2
denovogear	denovogear: Add missing zlib depenbdency and fix open handling error. (#13017)	2019-10-02 12:54:50 -05:00
dftfe
dia
dialign-tx	targets: adjust packages to use new specific targets semantics	2019-09-20 00:51:37 -07:00
diamond	diamond: added version 0.9.25 (#12805)	2019-09-13 07:37:52 +02:00
diffsplice	targets: adjust packages to use new specific targets semantics	2019-09-20 00:51:37 -07:00
diffutils	diffutils: add missing libiconv dependency (#12866)	2019-09-18 15:36:41 -05:00
dimemas
direnv	direnv: add info for version 2.20.0 (#13007)	2019-10-01 22:34:14 -05:00
discovar
discovardenovo
dislin
diy
dlpack
dmd
dmlc-core
dmtcp
dmxproto
docbook-xml
docbook-xsl
dos2unix
dotnet-core-sdk
double-conversion
doxygen
draco
dri2proto
dri3proto
ds
dsdp
dsrc
dtcmp
dyninst
dysco
ea-utils
easybuild	Add EasyBuild 4.0.0 (#13024)	2019-10-03 16:48:42 +02:00
ebms
eccodes
ecflow
eclipse-gcj-parser
ecp-io-sdk	Update ECP Data & Vis SDK packages (#13027)	2019-10-03 10:05:02 -04:00
ecp-proxy-apps
ecp-viz-sdk	Update ECP Data & Vis SDK packages (#13027)	2019-10-03 10:05:02 -04:00
ed
editline
editres
eem
eigen
elasticsearch
elemental
elfutils
elk
elmer-fem
elpa	Removed references to '(-march|-mtune|-mcpu)=native' (#12948)	2019-09-26 10:02:08 +02:00
elsd
elsdc
elsi
emacs
ember
emboss
enchant
energyplus
entrezdirect
environment-modules	environment-modules: add version 4.3.1 (#12893)	2019-09-21 21:32:27 -05:00
eospac	eospac: laws.lanl.gov -> laws-green.lanl.gov (#12970)	2019-09-27 17:28:38 -07:00
eqr
er
erfa
ermod
erne
es
esmf
essl
ethminer
etsf-io
everytrace
everytrace-example
evieext
exabayes
examinimd
exampm
exasp2
exchanger
exiv2
exmcutils
exodusii
exonerate
expat
expect
express
extrae
exuberant-ctags
eztrace
f18
f90cache
fabtests
falcon
fann
faodel
fast-global-file-status
fasta	targets: adjust packages to use new specific targets semantics	2019-09-20 00:51:37 -07:00
fastjar
fastmath
fastme
fastp
fastphase
fastq-screen
fastqc
fastqvalidator	fastqvalidator: add zlib dependency and Removes erroneous deletes in Chromosome (#13030)	2019-10-03 22:19:58 -05:00
fasttree
fastx-toolkit
fenics
fermi
fermikit
fermisciencetools
ferret
ffmpeg
fftw	fftw: simplify the recipe and make use of specific targets (#12889)	2019-10-03 22:32:42 -05:00
fgsl	fgsl: new version + fix for recent spack commit (#12790)	2019-09-11 20:15:50 -05:00
figtree
fimpute
findutils
fio	libaio: fixed a condition that checks whether we are running on OS X (#12976)	2019-10-01 15:35:50 -05:00
fish
fixesproto
flac
flang	targets: adjust packages to use new specific targets semantics	2019-09-20 00:51:37 -07:00
flann
flash
flatbuffers
flatcc
flecsale
flecsi	Correcting branch used for FleCSPH (#12865)	2019-09-18 14:00:47 -06:00
flecsph	Correcting branch used for FleCSPH (#12865)	2019-09-18 14:00:47 -06:00
flex
flibcpp	New package: flibcpp (Fortran bindings to C++ standard library) (#12926)	2019-09-25 19:25:24 -07:00
flint
flit
fltk
flux-core
flux-sched
fluxbox
fmt
foam-extend
folly
font-util	flake8: make entire repository pass spack flake8 -a	2019-09-07 23:59:10 -07:00
fontcacheproto
fontconfig
fontsproto
fonttosfnt
fp16
fpc
fpocket
fqtrim
fr-hit
freebayes
freeglut
freetype
freexl
fribidi	fribidi@1.0.5: new package (#12386)	2019-09-08 17:10:39 -05:00
fseq
fsl
fslsfonts
fstobdf
fstrack
ftgl
funhpc
fyba
fzf
g4abla
g4emlow
g4ensdfstate
g4ndl
g4neutronxs
g4photonevaporation
g4pii
g4radioactivedecay
g4realsurface
g4saiddata
g4tendl
gams
gapbs
gapcloser
gapfiller	flake8: make entire repository pass spack flake8 -a	2019-09-07 23:59:10 -07:00
gasnet	Update legion gasnet config (#12523)	2019-09-12 13:46:37 -06:00
gatk
gaudi
gaussian
gawk
gblocks
gcc	GCC package: don't set CC etc. based on bin dir if it doesn't exist (#13000)	2019-10-01 14:29:01 -07:00
gccmakedep
gccxml
gconf
gcta
gdal	GDAL: Add support for MKL driver (#12837)	2019-09-18 13:47:31 -05:00
gdb
gdbm
gdk-pixbuf
gdl	flake8: make entire repository pass spack flake8 -a	2019-09-07 23:59:10 -07:00
geant4
geant4-data
gearshifft
gemmlowp
genemark-et	Update genemark-et package	2019-09-13 19:05:02 -07:00
genomefinisher
genometools
geopm
geos
gettext
gflags
ghost
ghostscript
ghostscript-fonts
giflib
ginkgo
git
git-fat-git
git-imerge
git-lfs
gl2ps
glew
glfmultiples
glib
glibmm
glimmer
glm
global
globalarrays	flake8: make entire repository pass spack flake8 -a	2019-09-07 23:59:10 -07:00
globus-toolkit
glog
gloo
glpk
glproto
glvis
gmake
gmap-gsnap
gmime
gmodel
gmp
gmsh
gmt
gmtsar
gnat
gnome-common
gnu-prolog
gnupg
gnuplot
gnutls
go	Remove support for generating dotkit files (#11986)	2019-10-02 22:15:01 -07:00
go-bootstrap
go-md2man	go-md2man: disable module-mode (#12985)	2019-10-01 19:17:10 -05:00
gobject-introspection
googletest	googletest: fix darwin install name (#12871)	2019-09-18 22:46:16 -05:00
gotcha
gource
gperf
gperftools
gpgme
gplates
grackle
gradle
grandr
graph500
graphicsmagick
graphlib
graphmap	graphmap: add zlib dependency. (#13031)	2019-10-03 22:20:13 -05:00
graphviz
grass
grib-api
grnboost
groff
gromacs	flake8: make entire repository pass spack flake8 -a	2019-09-07 23:59:10 -07:00
gsl
gslib
gtkmm
gtkorvo-atl
gtkorvo-cercs-env
gtkorvo-dill
gtkorvo-enet
gtkplus
gtksourceview	Fix pkgconfig dependencies (#12714)	2019-09-09 12:54:46 -05:00
gts
guidance
guile
gurobi
h5hut
h5part
h5utils
h5z-zfp
hacckernels
hadoop
halc
hapcut2	hapcut2: add zlib dependency. (#13032)	2019-10-03 22:19:43 -05:00
hapdip
haploview
harfbuzz
harminv
hc
hdf
hdf5
hdf5-blosc
heaptrack	heaptrack: added new package at version 1.1.0 (#12844)	2019-09-24 15:54:23 +02:00
help2man
henson
hepmc
heppdt
hic-pro
highfive
highwayhash
hiop
hisat2
hisea	targets: adjust packages to use new specific targets semantics	2019-09-20 00:51:37 -07:00
hmmer
homer
hoomd-blue
hotspot
hpccg
hpctoolkit	Update target comparison semantic for a few packages (#12947)	2019-09-26 10:25:12 +02:00
hpcviewer
hpgmg	Removed references to '(-march|-mtune|-mcpu)=native' (#12948)	2019-09-26 10:02:08 +02:00
hpl
hpx
hpx5
hsakmt
hstr
htop
htslib
httpie
hub
hugo
hunspell
hwloc
hybpiper
hydra
hydrogen
hyphy
hypre	hypre: add version 2.18.0 (#12992)	2019-10-01 10:48:40 -05:00
i3
ibm-java	targets: adjust packages to use new specific targets semantics	2019-09-20 00:51:37 -07:00
ibmisc
iceauth
icedtea
icet
ico
icu4c
id3lib
idba	flake8: make entire repository pass spack flake8 -a	2019-09-07 23:59:10 -07:00
iegenlib
igraph
igvtools
ilmbase
image-magick
imake
imp
impute2
infernal
inputproto
intel	targets: adjust packages to use new specific targets semantics	2019-09-20 00:51:37 -07:00
intel-daal
intel-gpu-tools
intel-ipp
intel-mkl
intel-mkl-dnn
intel-mpi
intel-parallel-studio	targets: adjust packages to use new specific targets semantics	2019-09-20 00:51:37 -07:00
intel-pin
intel-tbb	intel-tbb: fix typo.	2019-09-20 17:53:23 -07:00
intel-xed	targets: adjust packages to use new specific targets semantics	2019-09-20 00:51:37 -07:00
interproscan	interproscan package: add version 4.8, patch for version 5 (#12897)	2019-09-25 19:04:57 -07:00
intltool
ioapi
ior
iozone
iperf2
iperf3
ipopt
isaac
isaac-server	targets: adjust packages to use new specific targets semantics	2019-09-20 00:51:37 -07:00
isl
iso-codes
itstool
itsx
jackcess
jags
jansson
jasper
jbigkit
jchronoss
jdk	targets: adjust packages to use new specific targets semantics	2019-09-20 00:51:37 -07:00
jellyfish
jemalloc
jmol
jq
json-c
json-cwx
json-fortran
json-glib
jsoncpp	jsoncpp: new versions, support cxxstd variant. (#12780)	2019-09-11 12:32:49 +02:00
jube
judy
julia	targets: adjust packages to use new specific targets semantics	2019-09-20 00:51:37 -07:00
k8
kahip
kaiju
kaks-calculator
kaldi	Kaldi package: add version 7637de7 and egs (#12911)	2019-10-01 10:24:03 -07:00
kallisto
karma
kbproto
kdiff3
kealib
kentutils
kibana
kim-api
kitty
kmergenie
kokkos	flake8: make entire repository pass spack flake8 -a	2019-09-07 23:59:10 -07:00
kokkos-kernels	kokkos-kernels: initial commit (#12934)	2019-09-25 09:00:01 -06:00
kraken
krb5
krims	Removed references to '(-march|-mtune|-mcpu)=native' (#12948)	2019-09-26 10:02:08 +02:00
kripke
kvasir-mpl
kvtree
ladot
laghos
lame
lammps
last
lastz
laszip
latte
launchmon
lazyten	Removed references to '(-march|-mtune|-mcpu)=native' (#12948)	2019-09-26 10:02:08 +02:00
lbann	flake8: make entire repository pass spack flake8 -a	2019-09-07 23:59:10 -07:00
lbxproxy
lbzip2
lcals
lcms
ldc
ldc-bootstrap
legion	Update legion gasnet config (#12523)	2019-09-12 13:46:37 -06:00
lemon
leveldb
lftp
libaec
libaio	libaio: fixed a condition that checks whether we are running on OS X (#12976)	2019-10-01 15:35:50 -05:00
libapplewm
libarchive
libassuan
libatomic-ops
libbeagle
libbeato
libbsd
libbson
libcanberra
libcap
libceed	Removed references to '(-march|-mtune|-mcpu)=native' (#12948)	2019-09-26 10:02:08 +02:00
libcerf	libcerf:add CFLAGS for fujitsu compiler (#12990)	2019-10-01 08:54:01 -05:00
libcheck
libcint
libcircle
libconfig
libcroco
libctl
libdivsufsort
libdmx
libdrm
libdwarf
libeatmydata
libedit
libelf
libemos
libepoxy
libev
libevent
libevpath
libfabric	flake8: make entire repository pass spack flake8 -a	2019-09-07 23:59:10 -07:00
libffi
libffs
libfive	Fix pkgconfig dependencies (#12714)	2019-09-09 12:54:46 -05:00
libflame	libflame: fix macOS build (#12950)	2019-09-25 18:37:33 -05:00
libfontenc
libfs
libgcrypt
libgd
libgeotiff
libgit2
libglvnd
libgpg-error
libgpuarray
libgridxc
libgtextutils
libharu
libhio
libiberty
libibumad	New package: libibumad (#12886)	2019-09-27 17:02:34 -07:00
libice
libiconv
libidn2
libint	libint + cp2k: 2-stage build with 'tune' and 'fortran' variants (#12475)	2019-10-02 21:31:19 +02:00
libjpeg
libjpeg-turbo
libkml	libkml: fix darwin install name (#12872)	2019-09-18 22:44:57 -05:00
libksba
liblas
liblbxutil	liblbxutil: Add zlib dependency. (#13033)	2019-10-03 22:19:22 -05:00
liblockfile
libmad
libmatheval
libmaxminddb
libmesh
libmng
libmo-unpack
libmongoc
libmonitor
libnbc
libnl
libnova
libnrm
libnsl
libogg
liboldx
libpcap
libpciaccess
libpeas
libpfm4
libpipeline
libplist
libpmemobj-cpp
libpng
libpsl
libpthread-stubs
libquo
librom
librsvg	Fix pkgconfig dependencies (#12714)	2019-09-09 12:54:46 -05:00
libseccomp
libsecret
libsharp	targets: adjust packages to use new specific targets semantics	2019-09-20 00:51:37 -07:00
libshm
libsigcpp
libsigsegv
libsm
libsodium
libspatialindex
libspatialite	libspatialite package: add version 3.0.1 and missing dependencies (#12843)	2019-09-25 18:48:48 -07:00
libsplash
libssh
libssh2
libsvm
libszip
libtasn1
libtermkey
libtiff
libtirpc
libtomlc99
libtool
libunistring	libunistring: add missing dependency on libiconv (#12863)	2019-09-18 13:37:19 -05:00
libunwind
libusb
libusbmuxd
libuuid
libuv
libvdwxc
libvorbis
libvterm
libwebp
libwebsockets
libwindowswm
libx11
libxau
libxaw
libxaw3d
libxc
libxcb
libxcomposite
libxcursor
libxdamage
libxdmcp
libxevie
libxext
libxfixes
libxfont
libxfont2
libxfontcache
libxft
libxi
libxinerama
libxkbcommon
libxkbfile
libxkbui
libxml2
libxmu
libxp
libxpm
libxpresent
libxprintapputil
libxprintutil
libxrandr
libxrender
libxres
libxscrnsaver
libxshmfence
libxslt
libxsmm
libxstream
libxt
libxtrap
libxtst
libxv
libxvmc
libxxf86dga
libxxf86misc
libxxf86vm
libyaml
libyogrt
libzip
liggghts	flake8: make entire repository pass spack flake8 -a	2019-09-07 23:59:10 -07:00
lighttpd
likwid
linkphase3
linux-headers
listres
llvm	llvm, mesa: update target comparison semantics (#12914)	2019-09-25 16:41:02 -07:00
llvm-openmp
llvm-openmp-ompt
lm-sensors
lmdb
lmod
lndir
log4cplus
log4cxx
loki
lordec
lrslib
lrzip
lsf
lsof
ltrace
lua
lua-bitlib
lua-jit
lua-lpeg
lua-luafilesystem
lua-luaposix
lua-mpack
luit
lulesh	flake8: make entire repository pass spack flake8 -a	2019-09-07 23:59:10 -07:00
lumpy-sv
lvm2	libaio: fixed a condition that checks whether we are running on OS X (#12976)	2019-10-01 15:35:50 -05:00
lwgrp
lwm2
lz4
lzma
lzo
m4
macsio
mad-numdiff
mafft
magics
magma
makedepend
maker	New package: maker and dependencies (#12904)	2019-09-27 14:59:58 -07:00
mallocmc
man-db
manta	updated manta checksum (#13038)	2019-10-03 18:23:47 -05:00
mapnik	New package: mapnik (#12708)	2019-10-02 13:50:57 -07:00
mapserver
maq
margo
mariadb	libaio: fixed a condition that checks whether we are running on OS X (#12976)	2019-10-01 15:35:50 -05:00
mariadb-c-client
masa
masurca	targets: adjust packages to use new specific targets semantics	2019-09-20 00:51:37 -07:00
mathematica
matio
matlab	flake8: make entire repository pass spack flake8 -a	2019-09-07 23:59:10 -07:00
maven
maverick	flake8: make entire repository pass spack flake8 -a	2019-09-07 23:59:10 -07:00
mawk
mbedtls
mc
mcl
mdtest
med
meep
mefit
megadock
megahit	targets: adjust packages to use new specific targets semantics	2019-09-20 00:51:37 -07:00
memaxes
meme
memkind
memsurfer
meraculous
mercurial	add new mercurial versions (#12997)	2019-10-01 12:08:28 -05:00
mercury
mesa	llvm, mesa: update target comparison semantics (#12914)	2019-09-25 16:41:02 -07:00
mesa-glu
meshkit
meson
mesquite
metabat	metabat: Add zlib and ncurses dependency. (#13034)	2019-10-03 22:18:55 -05:00
metaphysicl
metis
mfem	flake8: make entire repository pass spack flake8 -a	2019-09-07 23:59:10 -07:00
mgis
microbiomeutil
migrate
mii
minced
mindthegap
miniaero
miniamr
miniasm
miniconda2
miniconda3
minife
minighost
minigmg
minimap2	targets: adjust packages to use new specific targets semantics	2019-09-20 00:51:37 -07:00
minimd
miniqmc
minisign
minismac2d
minitri
minivite
minixyce
minizip	Add minizip package (#12835)	2019-09-18 12:53:01 -05:00
minuit
mira
mirdeep2
mitofates
mitos
mixcr
mkfontdir
mkfontscale
mlhka
mmg
moab
modern-wheel
mofem-cephas	flake8: make entire repository pass spack flake8 -a	2019-09-07 23:59:10 -07:00
mofem-fracture-module	flake8: make entire repository pass spack flake8 -a	2019-09-07 23:59:10 -07:00
mofem-minimal-surface-equation	flake8: make entire repository pass spack flake8 -a	2019-09-07 23:59:10 -07:00
mofem-users-modules	flake8: make entire repository pass spack flake8 -a	2019-09-07 23:59:10 -07:00
molcas
mongo-cxx-driver
mono
montage
mosh
mothur
motif
motioncor2
mount-point-attributes
mozjs
mpark-variant
mpc
mpdecimal
mpe2
mpest
mpfr
mpibash
mpiblast
mpich
mpifileutils	flake8: make entire repository pass spack flake8 -a	2019-09-07 23:59:10 -07:00
mpilander
mpileaks
mpip
mpir
mpix-launch-swift
mrbayes
mrnet
mrtrix3
mscgen
msgpack-c
mshadow
msmc
multitail
multitime
multiverso
mummer
mumps
munge
muparser
muscle
muse	muse: add zlib dependency. (#13040)	2019-10-03 22:18:27 -05:00
musl
muster
mutationpp
mvapich2
mxml
mxnet
mysql
nag
nalu
nalu-wind	flake8: make entire repository pass spack flake8 -a	2019-09-07 23:59:10 -07:00
namd
nano	Update nano (#12980)	2019-09-30 16:27:29 -05:00
nanoflann	Removed references to '(-march|-mtune|-mcpu)=native' (#12948)	2019-09-26 10:02:08 +02:00
nanopb
nasm
nauty
ncbi-magicblast
ncbi-rmblastn
ncbi-toolkit
nccl
nccmp
ncdu
ncftp
ncl
nco
ncurses	ncurses: improve build time (#12621)	2019-09-07 22:27:07 -05:00
ncview
ndiff
nek5000
nekbone
nekcem
nektar
nektools
neovim	Revert "update neovim (#12965)" (#12978)	2019-09-30 13:18:27 -05:00
nest
netcdf
netcdf-cxx
netcdf-cxx4
netcdf-fortran
netgauge
netgen
netlib-lapack
netlib-scalapack
netlib-xblas
nettle
neuron
nextflow	flake8: make entire repository pass spack flake8 -a	2019-09-07 23:59:10 -07:00
nfft
nghttp2
nginx
ngmlr	ngmlr: add zlib dependency. (#13041)	2019-10-03 22:18:12 -05:00
nim
ninja
ninja-fortran
nix
nlohmann-json	flake8: make entire repository pass spack flake8 -a	2019-09-07 23:59:10 -07:00
nlopt
nmap
nnvm
node-js
notmuch
npb
npm
npth
nrm
nseg
nspr
ntpoly
numactl
numdiff
nut
nvptx-tools
nwchem
nyancat
ocaml
occa
oce
oclint
oclock
octave
octave-optim
octave-splines
octave-struct
octopus
of-catalyst
of-precice
omega-h
ompss
ompt-openmp
oniguruma
ont-albacore
opa-psm2
opam
opari2
openbabel
openblas	openblas: fixed a query to target family (#12910)	2019-09-25 22:15:23 +02:00
opencoarrays
opencv
openexr
openfast
openfdtd
openfoam	add adios2 dependency and configuration for newest OpenFOAM (#12993)	2019-10-01 10:48:14 -05:00
openfoam-org
openfst
opengl
openglu
openimageio
openjdk	targets: adjust packages to use new specific targets semantics	2019-09-20 00:51:37 -07:00
openjpeg
openkim-models
openldap	new package: openldap (#12748)	2019-10-02 11:58:46 -05:00
openmc
openmpi
openmx	openmx: new package (#12768)	2019-09-10 12:59:13 -05:00
opennurbs
openpa
openpmd-api
openscenegraph
openslide
openspeedshop	targets: adjust packages to use new specific targets semantics	2019-09-20 00:51:37 -07:00
openspeedshop-utils	targets: adjust packages to use new specific targets semantics	2019-09-20 00:51:37 -07:00
openssh
openssl	targets: adjust packages to use new specific targets semantics	2019-09-20 00:51:37 -07:00
openstf
opium
optional-lite
optipng
opus
orca
orfm
orthofiller
orthofinder
orthomcl
osmctools
osu-micro-benchmarks
otf
otf2	otf2: add configure args to specify compiler commands. (#12711)	2019-09-30 08:18:09 -05:00
p4est	fix bug in p4est (don't use MPI spec if not compiling with MPI) (#12784)	2019-09-10 19:39:42 -05:00
p7zip
pacbio-daligner
pacbio-damasker
pacbio-dazz-db
pacbio-dextractor
packmol
pacvim
pagit
pagmo
pal
paml
panda
pandaseq
pandoc
pango
pangomm
papi
papyrus
paradiseo
parallel
parallel-netcdf
paraver
paraview	Add cuda to paraview build. (#12996)	2019-10-02 12:00:03 -05:00
parmetis
parmgridgen
parquet
parsimonator	parsimonator: simplified recipe by removing SIMD variants (#12949)	2019-09-26 09:33:18 +02:00
parsplice
partitionfinder
pasta
patch
patchelf
pathfinder
pax-utils
pbbam
pbmpi
pbsuite
pcma
pcre
pcre2
pdf2svg
pdftk
pdsh
pdt
pegtl
pennant
percept
perl
perl-acme-damn	New package: maker and dependencies (#12904)	2019-09-27 14:59:58 -07:00
perl-algorithm-diff
perl-alien-build	New package: maker and dependencies (#12904)	2019-09-27 14:59:58 -07:00
perl-alien-libxml2	New package: maker and dependencies (#12904)	2019-09-27 14:59:58 -07:00
perl-app-cmd
perl-array-utils
perl-b-hooks-endofscope
perl-bio-perl	New package: maker and dependencies (#12904)	2019-09-27 14:59:58 -07:00
perl-bit-vector
perl-cairo
perl-capture-tiny
perl-carp-clan
perl-cgi
perl-class-data-inheritable
perl-class-inspector
perl-class-load
perl-class-load-xs
perl-clone
perl-clone-choose
perl-compress-raw-bzip2
perl-compress-raw-zlib
perl-config-general
perl-contextual-return
perl-cpan-meta-check
perl-data-dumper
perl-data-optlist
perl-data-stag
perl-dbd-mysql
perl-dbd-pg	New package: maker and dependencies (#12904)	2019-09-27 14:59:58 -07:00
perl-dbd-sqlite
perl-dbfile
perl-dbi
perl-devel-cycle
perl-devel-globaldestruction
perl-devel-overloadinfo
perl-devel-stacktrace
perl-devel-symdump	New package: maker and dependencies (#12904)	2019-09-27 14:59:58 -07:00
perl-digest-md5
perl-dist-checkconflicts
perl-encode-locale
perl-error	New package: maker and dependencies (#12904)	2019-09-27 14:59:58 -07:00
perl-eval-closure
perl-exception-class
perl-exporter-tiny
perl-extutils-config
perl-extutils-depends
perl-extutils-helpers
perl-extutils-installpaths
perl-extutils-makemaker
perl-extutils-pkgconfig
perl-ffi-checklib	New package: maker and dependencies (#12904)	2019-09-27 14:59:58 -07:00
perl-file-chdir	New package: maker and dependencies (#12904)	2019-09-27 14:59:58 -07:00
perl-file-copy-recursive
perl-file-homedir
perl-file-listing
perl-file-pushd
perl-file-sharedir-install
perl-file-slurp-tiny
perl-file-slurper
perl-file-which
perl-font-ttf
perl-forks	New package: maker and dependencies (#12904)	2019-09-27 14:59:58 -07:00
perl-gd
perl-gd-graph
perl-gd-text
perl-gdgraph-histogram
perl-graph
perl-graph-readwrite
perl-hash-merge
perl-html-parser
perl-html-tagset
perl-http-cookies
perl-http-daemon	Add missing dependencies to perl-http-daemon (#12898)	2019-09-24 12:44:28 +02:00
perl-http-date
perl-http-message
perl-http-negotiate
perl-inline
perl-inline-c
perl-intervaltree
perl-io-all	New package: maker and dependencies (#12904)	2019-09-27 14:59:58 -07:00
perl-io-compress
perl-io-html
perl-io-prompt	New package: maker and dependencies (#12904)	2019-09-27 14:59:58 -07:00
perl-io-sessiondata
perl-io-socket-ssl
perl-io-string
perl-io-stringy	New package: maker and dependencies (#12904)	2019-09-27 14:59:58 -07:00
perl-io-tty	New package: maker and dependencies (#12904)	2019-09-27 14:59:58 -07:00
perl-ipc-run	New package: maker and dependencies (#12904)	2019-09-27 14:59:58 -07:00
perl-json
perl-libwww-perl	Added depencies to perl-libwww-perl (#12899)	2019-09-24 12:45:02 +02:00
perl-libxml-perl	New package: maker and dependencies (#12904)	2019-09-27 14:59:58 -07:00
perl-list-moreutils	Added missing dependencies for perl-list-moreutils (#12900)	2019-09-24 12:45:39 +02:00
perl-list-moreutils-xs	New package: maker and dependencies (#12904)	2019-09-27 14:59:58 -07:00
perl-log-log4perl
perl-logger-simple
perl-lwp
perl-lwp-mediatypes
perl-lwp-protocol-https
perl-mailtools	New package: maker and dependencies (#12904)	2019-09-27 14:59:58 -07:00
perl-math-bezier
perl-math-cdf
perl-math-cephes
perl-math-matrixreal
perl-math-round
perl-math-vecstat
perl-module-build
perl-module-build-tiny
perl-module-implementation
perl-module-runtime
perl-module-runtime-conflicts
perl-moose
perl-mozilla-ca
perl-mro-compat
perl-namespace-clean
perl-net-http
perl-net-scp-expect
perl-net-ssleay
perl-number-format
perl-object-insideout
perl-package-deprecationmanager
perl-package-stash
perl-package-stash-xs
perl-padwalker
perl-parallel-forkmanager
perl-params-util
perl-params-validate
perl-parse-recdescent
perl-path-tiny	New package: maker and dependencies (#12904)	2019-09-27 14:59:58 -07:00
perl-pdf-api2
perl-pegex
perl-perl4-corelibs
perl-perl6-slurp
perl-perl-unsafe-signals	New package: maker and dependencies (#12904)	2019-09-27 14:59:58 -07:00
perl-perlio-gzip
perl-perlio-utf8-strict
perl-readonly
perl-regexp-common
perl-scalar-list-utils
perl-scalar-util-numeric
perl-set-intspan
perl-set-scalar	New package: maker and dependencies (#12904)	2019-09-27 14:59:58 -07:00
perl-soap-lite
perl-star-fusion	The perl-uri-escape package duplicates perl-uri (#12971)	2019-09-29 09:27:42 -05:00
perl-statistics-basic
perl-statistics-descriptive
perl-statistics-pca
perl-sub-exporter
perl-sub-exporter-progressive
perl-sub-identify
perl-sub-install
perl-sub-name
perl-sub-uplevel
perl-svg
perl-swissknife
perl-sys-sigaction	New package: maker and dependencies (#12904)	2019-09-27 14:59:58 -07:00
perl-task-weaken
perl-term-readkey	New package: maker and dependencies (#12904)	2019-09-27 14:59:58 -07:00
perl-test-cleannamespaces
perl-test-deep
perl-test-differences
perl-test-exception
perl-test-fatal
perl-test-memory-cycle
perl-test-most	flake8: make entire repository pass spack flake8 -a	2019-09-07 23:59:10 -07:00
perl-test-needs
perl-test-requires
perl-test-requiresinternet
perl-test-warn
perl-test-warnings
perl-text-csv
perl-text-diff
perl-text-format
perl-text-simpletable
perl-text-soundex
perl-text-unidecode
perl-time-hires
perl-time-piece
perl-timedate	New package: maker and dependencies (#12904)	2019-09-27 14:59:58 -07:00
perl-try-tiny
perl-uri	The perl-uri-escape package duplicates perl-uri (#12971)	2019-09-29 09:27:42 -05:00
perl-version
perl-want
perl-www-robotrules
perl-xml-dom	New package: maker and dependencies (#12904)	2019-09-27 14:59:58 -07:00
perl-xml-dom-xpath	New package: maker and dependencies (#12904)	2019-09-27 14:59:58 -07:00
perl-xml-filter-buffertext	New package: maker and dependencies (#12904)	2019-09-27 14:59:58 -07:00
perl-xml-libxml	New package: maker and dependencies (#12904)	2019-09-27 14:59:58 -07:00
perl-xml-namespacesupport	New package: maker and dependencies (#12904)	2019-09-27 14:59:58 -07:00
perl-xml-parser	Add missing dependency to perl-xml-parser (#12903)	2019-09-24 12:51:55 +02:00
perl-xml-parser-lite
perl-xml-quote	New package: maker and dependencies (#12904)	2019-09-27 14:59:58 -07:00
perl-xml-regexp	New package: maker and dependencies (#12904)	2019-09-27 14:59:58 -07:00
perl-xml-sax	New package: maker and dependencies (#12904)	2019-09-27 14:59:58 -07:00
perl-xml-sax-base	New package: maker and dependencies (#12904)	2019-09-27 14:59:58 -07:00
perl-xml-sax-writer	New package: maker and dependencies (#12904)	2019-09-27 14:59:58 -07:00
perl-xml-simple
perl-xml-twig	New package: maker and dependencies (#12904)	2019-09-27 14:59:58 -07:00
perl-xml-writer	New package: maker and dependencies (#12904)	2019-09-27 14:59:58 -07:00
perl-xml-xpathengine	New package: maker and dependencies (#12904)	2019-09-27 14:59:58 -07:00
perl-yaml
perl-yaml-libyaml
petsc	petsc, slepc: add new versions - 3.12.0 (#12979)	2019-09-30 13:18:11 -05:00
pexsi
pfft
pflotran
pfunit
pgdspider
pgi
pgmath
phantompeakqualtools
phast
phasta
phist
phrap-crossmatch-swat
phred
phylip
phyluce
picard	picard: add 2.20.8	2019-10-01 18:19:37 -07:00
picsar	flake8: make entire repository pass spack flake8 -a	2019-09-07 23:59:10 -07:00
picsarlite	flake8: make entire repository pass spack flake8 -a	2019-09-07 23:59:10 -07:00
pidx
pigz
pilon
pindel
piranha
pism
pixman
pixz
pkg-config
pkgconf
pktools
planck-likelihood	targets: adjust packages to use new specific targets semantics	2019-09-20 00:51:37 -07:00
plasma
platypus
plink
plplot
plumed
pmdk
pmgr-collective
pmix
pmlib
pnfft
pngquant
pngwriter
pnmpi
poamsa
pocl
polymake
poppler
poppler-data
popt	create package popt (#12783)	2019-09-10 21:33:33 -05:00
porta
portage	portage: fix RelWithDebInfo build (#12944)	2019-09-25 11:29:43 -06:00
portcullis	targets: adjust packages to use new specific targets semantics	2019-09-20 00:51:37 -07:00
postgresql
powerapi
ppl
pplacer
prank
precice	preCICE: added versions 1.6.0 and 1.6.1 (#12809)	2019-09-13 16:04:50 +02:00
presentproto
preseq
price
primer3
prinseq-lite
printproto
prng
probconsrna
prodigal
proj
protobuf
protobuf-c
proxymngr
prrte
pruners-ninja
ps-lite
psi4
pslib
psm
psmc
pstreams
pugixml
pumi	flake8: make entire repository pass spack flake8 -a	2019-09-07 23:59:10 -07:00
pv
pvm
pxz
py-3to2
py-4suite-xml
py-abipy
py-absl-py
py-adios	py-adios package: restrict python dependency to <=3.6.x (#12932)	2019-09-27 17:19:36 -07:00
py-advancedhtmlparser
py-aenum
py-affine
py-alabaster
py-alembic
py-altgraph	Update buildcache creation and installation to allow mach-o binary relocation using py-machotools on linux or macos. (#12858)	2019-09-18 07:24:45 -05:00
py-antlr4-python3-runtime
py-apache-libcloud
py-apipkg
py-appdirs
py-appnope
py-apscheduler
py-argcomplete
py-argparse
py-asdf	Add py-asdf package (#12817)	2019-09-16 13:07:48 -05:00
py-ase
py-asn1crypto
py-astor
py-astroid
py-astropy	Add py-astropy 2.0.14 (#12816)	2019-09-16 13:09:30 -05:00
py-astunparse
py-async-generator
py-atomicwrites
py-atropos	py-atropos: new package (#12745)	2019-09-10 12:18:31 -05:00
py-attrs
py-autopep8
py-avro
py-avro-json-serializer
py-babel
py-backcall
py-backports-abc
py-backports-functools-lru-cache
py-backports-shutil-get-terminal-size
py-backports-ssl-match-hostname
py-backports-tempfile
py-backports-weakref
py-basemap
py-bcbio-gff
py-beautifulsoup4	Add py-beautifulsoup4 4.8.0 (#12815)	2019-09-16 13:08:36 -05:00
py-bintrees	Add py-bintrees package (#12818)	2019-09-16 13:07:21 -05:00
py-binwalk
py-biom-format
py-biomine
py-biopython
py-bitarray
py-bitstring
py-black
py-bleach	py-bleach package: add version 3.1.0 (#12814)	2019-09-13 19:15:54 -07:00
py-blessed
py-blessings
py-blinker
py-bokeh	Update py-bokeh: new version & dependencies" (#12724)	2019-09-09 11:59:27 -05:00
py-boltons
py-boto3
py-botocore
py-bottleneck
py-breakseq2
py-breathe
py-brian
py-brian2
py-bsddb3
py-bx-python
py-bz2file	new package: py-bz2file (#12761)	2019-09-08 10:38:37 -05:00
py-cachetools
py-cairocffi
py-cartopy
py-cclib
py-cdat-lite
py-cdo
py-certifi
py-cf-units
py-cffi
py-cftime
py-chardet
py-checkm-genome
py-cheetah
py-click
py-click-plugins
py-cligj
py-clipboard
py-cloudpickle
py-cogent
py-colorama
py-colorlog
py-colormath
py-colorpy
py-configobj	Package/py configobj (#12639)	2019-09-08 17:08:59 -05:00
py-configparser
py-counter
py-cov-core
py-coverage
py-cpuinfo
py-crispresso
py-crossmap
py-cryptography
py-csvkit
py-current
py-cutadapt	py-cutadapt: Updated version checksum (#12741)	2019-09-08 10:46:08 -05:00
py-cvxopt	flake8: make entire repository pass spack flake8 -a	2019-09-07 23:59:10 -07:00
py-cycler
py-cython	py-cython package: fix --test (#12813)	2019-09-13 19:15:06 -07:00
py-dask
py-dbf
py-decorator
py-deeptools
py-deeptoolsintervals
py-dendropy
py-descartes
py-dill
py-discover
py-dlcpar
py-dnaio	py-dnaio: new package need by py-cutadapt (#12743)	2019-09-08 10:37:49 -05:00
py-docopt
py-docutils
py-doxypy
py-doxypypy
py-dryscrape
py-dxchange
py-dxfile
py-earthengine-api
py-easybuild-easyblocks	Add EasyBuild 4.0.0 (#13024)	2019-10-03 16:48:42 +02:00
py-easybuild-easyconfigs	Add EasyBuild 4.0.0 (#13024)	2019-10-03 16:48:42 +02:00
py-easybuild-framework	Add EasyBuild 4.0.0 (#13024)	2019-10-03 16:48:42 +02:00
py-ecdsa
py-edffile
py-editdistance
py-elasticsearch
py-elephant
py-emcee	py-emcee package: add version 2.2.1 (#12812)	2019-09-13 19:13:45 -07:00
py-empy
py-entrypoints
py-enum34
py-epydoc
py-espresso
py-espressopp
py-et-xmlfile
py-eventlet
py-execnet
py-exodus
py-fallocate
py-fastaindex
py-fastcache
py-fasteners
py-faststructure
py-filelock
py-filemagic
py-fiona
py-fiscalyear
py-flake8
py-flake8-polyfill
py-flask
py-flask-compress
py-flask-socketio
py-flexx
py-flye	Add py-flye 2.6 (#13025)	2019-10-03 10:32:00 -05:00
py-fn
py-fortranformat
py-fparser
py-freezegun
py-fsspec	New package: py-fsspec (#12725)	2019-09-09 11:58:49 -05:00
py-funcsigs
py-functools32
py-future
py-futures
py-fypp
py-gast	New package: py-gast (#12874)	2019-09-20 17:59:50 -07:00
py-gdbgui
py-gdc-client
py-gee-asset-manager
py-geeadd
py-geeup
py-genders
py-genshi
py-geoalchemy2
py-geopandas
py-gevent
py-git2
py-git-review
py-gnuplot
py-goatools
py-google-api-core
py-google-api-python-client
py-google-auth
py-google-auth-httplib2
py-google-cloud-core
py-google-cloud-storage
py-google-resumable-media
py-googleapis-common-protos
py-gpaw	py-gpaw: Fixed broken fftw linking in newer versions of py-gpaw (#12795)	2019-09-12 09:36:45 -05:00
py-graphviz
py-greenlet
py-grequests
py-griddataformats
py-guidata
py-guiqwt
py-h5glance
py-h5py
py-hdfs
py-hepdata-validator
py-hpccm
py-html2text
py-html5lib	Relax Python version constraints on py-html5lib (#12811)	2019-09-16 12:56:21 -05:00
py-htseq
py-httpbin
py-httplib2
py-humanize
py-hypothesis
py-idna
py-igraph
py-illumina-utils
py-imageio	py-imageio package: add versions 2.4.1 and 2.5.0 (#12884)	2019-09-25 18:44:57 -07:00
py-imagesize
py-iminuit
py-importlib
py-importlib-metadata
py-iniparse	new package: py-iniparse (#12638)	2019-09-08 17:09:24 -05:00
py-invoke
py-ipaddress
py-ipdb
py-ipykernel	fix ipykernel dependency, newer versions are python3-only (#13019)	2019-10-03 22:17:16 -05:00
py-ipython
py-ipython-genutils
py-ipywidgets
py-isort
py-itsdangerous
py-jdcal
py-jedi
py-jinja2
py-jmespath
py-joblib
py-jplephem	Add py-jplephem package (#12819)	2019-09-16 13:06:33 -05:00
py-jprops
py-jpype
py-jsonpatch
py-jsonpointer
py-jsonschema
py-junit-xml
py-jupyter-client
py-jupyter-console
py-jupyter-core
py-jupyter-notebook	update py-jupyter-notebook to use the real releases (#13020)	2019-10-02 11:39:55 -05:00
py-jupyterhub
py-keras
py-keras-applications
py-keras-preprocessing
py-kitchen
py-kiwisolver
py-kmodes
py-lark-parser
py-latexcodec
py-lazy
py-lazy-object-proxy
py-lazy-property
py-lazyarray
py-libconf
py-libensemble
py-ligo-segments	Add py-ligo-segments package (#12820)	2019-09-16 13:06:09 -05:00
py-line-profiler
py-linecache2
py-lit
py-llvmlite
py-lmfit
py-localcider
py-locket
py-lockfile
py-logilab-common
py-lrudict
py-lscsoft-glue	Add py-lscsoft-glue package (#12821)	2019-09-16 13:06:59 -05:00
py-luigi
py-lxml
py-lzstring
py-m2r
py-macholib	Update buildcache creation and installation to allow mach-o binary relocation using py-machotools on linux or macos. (#12858)	2019-09-18 07:24:45 -05:00
py-machotools
py-macs2
py-maestrowf
py-mako
py-markdown
py-markupsafe
py-matplotlib
py-mccabe
py-mdanalysis	flake8: make entire repository pass spack flake8 -a	2019-09-07 23:59:10 -07:00
py-mechanize
py-meep
py-memory-profiler
py-merlin
py-metasv
py-methylcode
py-mg-rast-tools
py-misopy
py-mistune
py-mlxtend
py-mo-pack
py-mock
py-modred
py-moltemplate
py-mongo
py-monotonic
py-monty
py-more-itertools
py-mpi4py
py-mpld3	Add py-mpld3 package (#12822)	2019-09-16 13:08:17 -05:00
py-mpmath
py-multi-key-dict
py-multiprocess
py-multiqc
py-munch
py-mx
py-mxnet
py-myhdl
py-mysql-connector
py-mysqlclient
py-mysqldb1
py-natsort
py-nbconvert
py-nbformat
py-nc-time-axis
py-neo
py-nestle
py-netcdf4
py-netifaces
py-networkx
py-nose
py-nose2
py-nosexcover
py-numba
py-numexpr
py-numexpr3
py-numpy
py-numpydoc
py-oauth2client
py-oauthlib
py-olefile
py-onnx
py-ont-fast5-api
py-openpmd-validator
py-openpyxl
py-openslide-python
py-opentuner
py-opppy
py-ordereddict
py-oset
py-overpy
py-owslib
py-packaging
py-palettable
py-pandas
py-paramiko
py-partd
py-path-py
py-pathlib
py-pathlib2
py-pathos
py-pathspec
py-patsy
py-pauvre
py-pbr
py-pep8-naming
py-perf
py-performance
py-periodictable
py-petsc4py
py-pexpect
py-phonopy
py-pickleshare
py-picrust
py-pil
py-pillow
py-pint
py-pip
py-pipits
py-pispino
py-pkgconfig
py-planar
py-plotly
py-pluggy
py-ply
py-pmw
py-poster
py-pox
py-ppft
py-prettytable
py-progress
py-progressbar2
py-projectq
py-prometheus-client
py-prompt-toolkit
py-protobuf	py-protobuf package: fix import error for Python 2.x (#12873)	2019-09-20 17:52:11 -07:00
py-psutil
py-psyclone
py-psycopg2
py-ptyprocess
py-pudb
py-py
py-py2bit
py-py2cairo
py-py2neo
py-py4j
py-pyani
py-pyarrow
py-pyasn1
py-pyasn1-modules
py-pybedtools
py-pybigwig
py-pybind11
py-pybtex
py-pybtex-docutils
py-pycairo
py-pycares	flake8: make entire repository pass spack flake8 -a	2019-09-07 23:59:10 -07:00
py-pycbc	Add py-pycbc package (#12823)	2019-09-16 13:10:02 -05:00
py-pychecker
py-pycodestyle
py-pycparser
py-pycrypto
py-pycuda
py-pycurl
py-pydatalog
py-pydispatcher
py-pydot
py-pydot2
py-pydotplus
py-pydv
py-pyelftools
py-pyepsg
py-pyfaidx
py-pyfasta
py-pyfftw
py-pyflakes
py-pygdal	add a version (#12856)	2019-09-17 22:54:18 -05:00
py-pygdbmi
py-pyglet
py-pygments
py-pygobject
py-pygpu
py-pygresql
py-pygtk
py-pyjwt
py-pyke
py-pykml
py-pykwalify	New package: py-pykwalify (#12540)	2019-09-13 12:22:08 -07:00
py-pyliblzma
py-pylint
py-pymatgen
py-pyminifier
py-pymol
py-pymorph
py-pympler
py-pymysql
py-pynio
py-pynn
py-pyodbc
py-pyomo
py-pyopenssl	Add py-pyopenssl package (#12824)	2019-09-16 13:05:37 -05:00
py-pypar
py-pyparsing
py-pypeflow
py-pyperclip
py-pyprof2html
py-pyproj
py-pyqi
py-pyqt4	Fix PyQt installation (#12479)	2019-09-08 10:48:50 -05:00
py-pyqt5	Fix PyQt installation (#12479)	2019-09-08 10:48:50 -05:00
py-pyrad
py-pyrosar
py-pysam
py-pyscaf
py-pyserial
py-pyshp
py-pyside
py-pysmartdl
py-pysocks
py-pyspark
py-pysqlite
py-pytailf
py-pytest
py-pytest-cache
py-pytest-cov
py-pytest-flake8
py-pytest-httpbin
py-pytest-isort
py-pytest-mock
py-pytest-runner
py-pytest-xdist
py-pythia
py-python-daemon
py-python-dateutil
py-python-engineio
py-python-gitlab
py-python-htmlgen
py-python-jenkins
py-python-ldap	new package: py-python-ldap (#12599)	2019-10-01 20:59:53 -05:00
py-python-levenshtein
py-python-magic
py-python-mapnik	New package: py-python-mapnik (#12786)	2019-10-01 18:37:34 -07:00
py-python-socketio
py-python-utils
py-pythonqwt
py-pytools
py-pytz
py-pyudev	fix typo in version number (#12855)	2019-09-17 20:28:57 -05:00
py-pyugrid
py-pyutilib
py-pyvcf
py-pywavelets
py-pyyaml
py-qtawesome
py-qtconsole
py-qtpy
py-quantities
py-quast
py-queryablelist
py-radical-utils
py-ranger
py-rasterio
py-ratelim
py-readme-renderer
py-regex
py-reportlab
py-repoze-lru
py-requests
py-requests-futures
py-requests-oauthlib
py-requests-toolbelt
py-restview
py-retrying
py-rope
py-rpy2
py-rsa
py-rseqc
py-rtree
py-ruamel-yaml	New package: py-ruamel-yaml (#12543)	2019-09-12 15:46:39 -07:00
py-s3transfer
py-saga-python
py-scandir
py-scientificpython
py-scikit-image
py-scikit-learn
py-scikit-optimize	flake8: make entire repository pass spack flake8 -a	2019-09-07 23:59:10 -07:00
py-scipy
py-scoop
py-scp
py-seaborn
py-selenium
py-semantic-version	Add py-semantic-version package (#12825)	2019-09-16 13:05:12 -05:00
py-send2trash
py-setuptools
py-setuptools-git
py-setuptools-scm
py-sfepy
py-sgp4
py-sh
py-shapely
py-shiboken
py-simplegeneric
py-simplejson
py-simplekml
py-singledispatch
py-sip	Fix PyQt installation (#12479)	2019-09-08 10:48:50 -05:00
py-six
py-slepc4py
py-slurm-pipeline
py-sncosmo
py-snowballstemmer
py-snuggs
py-sortedcontainers	Add py-sortedcontainers package (#12826)	2019-09-16 13:04:50 -05:00
py-soupsieve	Add py-soupsieve package (#12827)	2019-09-16 12:56:53 -05:00
py-spatialist
py-spectra
py-spefile
py-spglib
py-sphinx
py-sphinx-bootstrap-theme
py-sphinx-rtd-theme
py-sphinxautomodapi
py-sphinxcontrib-bibtex
py-sphinxcontrib-programoutput
py-sphinxcontrib-websupport
py-spyder
py-spykeutils
py-sqlalchemy
py-statsmodels
py-stevedore
py-storm
py-stratify
py-subprocess32
py-symengine
py-symfit
py-sympy
py-systemd-python
py-tables
py-tabulate
py-tappy
py-tblib
py-termcolor
py-terminado
py-testinfra
py-tetoolkit
py-texttable
py-theano
py-tifffile
py-toml
py-tomopy
py-toolz
py-torch
py-torchvision
py-tornado
py-tqdm
py-traceback2
py-traitlets
py-treehash
py-tuiview
py-twisted
py-typesentry
py-typing
py-typing-extensions
py-tzlocal
py-udunits
py-umi-tools
py-unicycler
py-unittest2
py-unittest2py3k
py-uritemplate
py-urllib3
py-urwid
py-usgs
py-vcversioner
py-virtualenv
py-virtualenv-clone
py-virtualenvwrapper
py-vsc-base
py-vsc-install
py-wand
py-warlock
py-wcsaxes
py-wcwidth
py-weave	Add py-weave package (#12828)	2019-09-16 12:57:18 -05:00
py-webencodings
py-webkit-server
py-weblogo
py-werkzeug
py-whatshap
py-wheel
py-widgetsnbextension
py-wrapt
py-wxpython
py-xarray
py-xattr
py-xdot
py-xenv
py-xlrd
py-xlsxwriter
py-xmlrunner
py-xopen	py-xopen: update release 0.8.2 checksum (#12742)	2019-09-08 10:38:19 -05:00
py-xpyb
py-xvfbwrapper
py-yamlreader
py-yapf
py-yt
py-ytopt	flake8: make entire repository pass spack flake8 -a	2019-09-07 23:59:10 -07:00
py-zipp
py-zmq
py-zope-event
py-zope-interface
pythia6	flake8: make entire repository pass spack flake8 -a	2019-09-07 23:59:10 -07:00
python
qbank
qbox
qca
qhull
qjson
qmcpack	flake8: make entire repository pass spack flake8 -a	2019-09-07 23:59:10 -07:00
qmd-progress
qorts
qrupdate
qt	qt4: fix 'arch' string due to microarchitecture change (#12957)	2019-09-26 21:15:17 +02:00
qt-creator
qtgraph
qthreads
qtkeychain
quantum-espresso	flake8: make entire repository pass spack flake8 -a	2019-09-07 23:59:10 -07:00
quinoa
qwt
qwtpolar
r
r3d
r-a4
r-a4base
r-a4classif
r-a4core
r-a4preproc
r-a4reporting
r-abadata
r-abaenrichment
r-abind
r-absseq
r-acde
r-acepack
r-acgh
r-acme
r-ada
r-adabag
r-ade4
r-adegenet
r-adsplit
r-aer
r-affxparser
r-affy
r-affycomp
r-affycompatible
r-affycontam
r-affycoretools
r-affydata
r-affyexpress
r-affyilm
r-affyio
r-affypdnn
r-affyplm
r-affyqcreport
r-affyrnadegradation
r-agdex
r-agilp
r-agimicrorna
r-aims
r-aldex2
r-allelicimbalance
r-alpine
r-als
r-alsace
r-altcdfenvs
r-amap
r-ampliqueso
r-analysispageserver
r-anaquin
r-aneufinder
r-aneufinderdata
r-animation
r-annaffy
r-annotate
r-annotationdbi
r-annotationfilter
r-annotationforge
r-annotationhub
r-ape
r-argparse
r-askpass
r-assertthat
r-backports
r-bamsignals
r-base64
r-base64enc
r-bayesm
r-bbmisc
r-beanplot
r-bfast
r-bfastspatial
r-bglr
r-bh
r-biasedurn
r-bibtex
r-bindr
r-bindrcpp
r-biobase
r-biocgenerics
r-biocinstaller
r-biocparallel
r-biocstyle
r-biom-utils
r-biomart
r-biomformat
r-biostrings
r-biovizbase
r-bit
r-bit64
r-bitops
r-blob
r-blockmodeling
r-bookdown
r-boot
r-brew
r-broom
r-bsgenome
r-bumphunter
r-c50
r-cairo
r-callr
r-car
r-cardata
r-caret
r-caroline
r-category
r-catools
r-cdcfluview
r-cellranger
r-checkmate
r-checkpoint
r-chemometrics
r-chron
r-circlize
r-class
r-classint
r-cli
r-clipr
r-clisymbols
r-cluster
r-clustergeneration
r-clusterprofiler
r-cner
r-coda
r-codetools
r-coin
r-colorspace
r-combinat
r-commonmark
r-complexheatmap
r-compositions
r-construct
r-convevol
r-corhmm
r-corpcor
r-corrplot
r-covr
r-cowplot
r-crayon
r-crosstalk
r-crul
r-ctc
r-cubature
r-cubist
r-curl
r-data-table
r-dbi
r-dbplyr
r-debugme
r-delayedarray
r-deldir
r-dendextend
r-deoptim
r-deoptimr
r-desc
r-deseq
r-deseq2
r-desolve
r-devtools
r-diagrammer
r-dicekriging
r-dichromat
r-diffusionmap
r-digest
r-diptest
r-dirichletmultinomial
r-dismo
r-diversitree
r-dnacopy
r-do-db
r-domc
r-doparallel
r-dorng
r-dose
r-dosnow
r-downloader
r-dplyr
r-dqrng
r-dt
r-dtw
r-dygraphs
r-dynamictreecut
r-e1071
r-edger
r-ellipse
r-ellipsis
r-emmli
r-energy
r-ensembldb
r-ergm
r-evaluate
r-expint
r-expm
r-factoextra
r-factominer
r-fansi
r-fastcluster
r-fastmatch
r-ff
r-fftwtools
r-fgsea
r-filehash
r-findpython
r-fit-models
r-fitdistrplus
r-flashclust
r-flexclust
r-flexmix
r-fnn
r-forcats
r-foreach
r-forecast
r-foreign
r-formatr
r-formula
r-fpc
r-fracdiff
r-fs
r-futile-logger
r-futile-options
r-future
r-future-apply
r-gamlss
r-gamlss-data
r-gamlss-dist
r-gbm
r-gbrd
r-gcrma
r-gdalutils
r-gdata
r-gdsfmt
r-geiger	flake8: make entire repository pass spack flake8 -a	2019-09-07 23:59:10 -07:00
r-genefilter
r-genelendatabase
r-geneplotter
r-generics
r-genie3
r-genomeinfodb
r-genomeinfodbdata
r-genomicalignments
r-genomicfeatures
r-genomicranges
r-gensa
r-geomorph
r-geonames
r-geoquery
r-geor
r-geosphere
r-getopt
r-getoptlong
r-ggally
r-ggbio
r-ggdendro
r-ggjoy
r-ggmap
r-ggplot2
r-ggpubr
r-ggrepel
r-ggridges
r-ggsci
r-ggsignif
r-ggvis
r-gh
r-gistr
r-git2r
r-glimma
r-glmnet
r-globaloptions
r-globals
r-glue
r-gmodels
r-gmp
r-go-db
r-googlevis
r-goplot
r-gosemsim
r-goseq
r-gostats
r-gower
r-gplots
r-graph
r-grbase
r-gridbase
r-gridextra
r-gsa
r-gseabase
r-gss
r-gsubfn
r-gtable
r-gtools
r-gtrellis
r-gviz
r-gwmodel
r-haven
r-hdf5r
r-hexbin
r-highr
r-hmisc
r-hms
r-hoardr
r-htmltable
r-htmltools
r-htmlwidgets
r-httpcode
r-httpuv
r-httr
r-hwriter
r-hypergraph
r-ica
r-igraph
r-illuminaio
r-impute
r-influencer
r-ini
r-inline
r-interactivedisplaybase
r-intervals
r-inum
r-ipred
r-iranges
r-irdisplay
r-irkernel
r-irlba
r-isdparser
r-iso
r-iterators
r-janitor
r-jaspar2018
r-jomo
r-jpeg
r-jsonlite
r-kegg-db
r-kegggraph
r-keggrest
r-kernlab
r-kernsmooth
r-kknn
r-knitr
r-ks
r-labeling
r-lambda-r
r-laplacesdemon
r-lars
r-later
r-lattice
r-latticeextra
r-lava
r-lazyeval
r-leaflet
r-leaps
r-learnbayes
r-leiden
r-lhs
r-libcoin
r-limma
r-listenv
r-lme4
r-lmtest
r-locfit
r-log4r
r-loo
r-lpsolve
r-lsei
r-lubridate
r-magic
r-magick
r-magrittr
r-makecdfenv
r-maldiquant
r-manipulatewidget
r-mapproj
r-maps
r-maptools
r-markdown
r-mass
r-matr
r-matrix
r-matrixmodels
r-matrixstats
r-mclust
r-mcmcglmm
r-mco
r-mda
r-memoise
r-mergemaid
r-metap
r-mgcv
r-mgraster
r-mice
r-mime
r-minfi
r-miniui
r-minqa
r-misc3d
r-mitml
r-mitools
r-mixtools
r-mlbench
r-mlinterfaces
r-mlr
r-mlrmbo
r-mmwrweek
r-mnormt
r-modelmetrics
r-modelr
r-modeltools
r-mpm
r-msnbase
r-multcomp
r-multicool
r-multitaper
r-multtest
r-munsell
r-mvtnorm
r-mzid
r-mzr
r-nanotime
r-ncbit
r-ncdf4
r-network
r-networkd3
r-nleqslv
r-nlme
r-nloptr
r-nmf
r-nmof
r-nnet
r-nnls
r-nor1mix
r-nortest
r-np
r-npsurv
r-numderiv
r-oligoclasses
r-openssl
r-openxlsx
r-optparse
r-ordinal
r-org-hs-eg-db
r-organismdbi
r-packrat
r-pacman
r-paleotree
r-pamr
r-pan
r-parallelmap
r-paramhelpers
r-party
r-partykit
r-pathview
r-pbapply
r-pbdzmq
r-pbkrtest
r-pcamethods
r-pcapp
r-permute
r-pfam-db
r-phangorn
r-phantompeakqualtools
r-phyloseq
r-phylostratr
r-phytools
r-picante
r-pillar
r-pkgbuild
r-pkgconfig
r-pkgload
r-pkgmaker
r-plogr
r-plot3d
r-plotly
r-plotrix
r-pls
r-plyr
r-pmcmr
r-png
r-polynom
r-popgenome
r-popvar
r-powerlaw
r-prabclus
r-praise
r-preprocesscore
r-prettyunits
r-processx
r-prodlim
r-progress
r-promises
r-protgenerics
r-proto
r-proxy
r-pryr
r-ps
r-psych
r-ptw
r-purrr
r-qtl
r-quadprog
r-quantmod
r-quantreg
r-quantro
r-qvalue
r-r6
r-r-methodss3
r-r-oo
r-r-utils
r-randomfields
r-randomfieldsutils
r-randomforest
r-randomglm
r-ranger
r-rann
r-rappdirs
r-raster
r-rbgl
r-rbokeh
r-rcmdcheck
r-rcolorbrewer
r-rcpp
r-rcppannoy
r-rcpparmadillo
r-rcppblaze
r-rcppcctz
r-rcppcnpy
r-rcppeigen
r-rcppparallel
r-rcppprogress
r-rcurl
r-rda
r-rdpack
r-readr
r-readxl
r-recipes
r-registry
r-rematch
r-remotes
r-reordercluster
r-reportingtools
r-repr
r-reprex
r-reshape
r-reshape2
r-reticulate
r-rex
r-rgdal
r-rgenoud
r-rgeos
r-rgexf
r-rgl
r-rgooglemaps
r-rgraphviz
r-rhdf5
r-rhmmer
r-rhtslib
r-rinside
r-rio
r-rjags
r-rjava
r-rjson
r-rjsonio
r-rlang
r-rmarkdown
r-rminer
r-rmpfr
r-rmpi
r-rmutil
r-rmysql
r-rngtools
r-rnoaa
r-robust
r-robustbase
r-rocr
r-rodbc
r-rook
r-rots
r-roxygen2
r-rpart
r-rpart-plot
r-rpostgresql
r-rprojroot
r-rrblup
r-rrcov
r-rrpp
r-rsamtools
r-rsnns
r-rsolnp
r-rspectra
r-rsqlite
r-rstan
r-rstantools
r-rstudioapi
r-rsvd
r-rtracklayer
r-rtsne
r-runit
r-rvcheck
r-rvest
r-rzmq
r-s4vectors
r-samr
r-sandwich
r-scales
r-scatterplot3d
r-sctransform
r-sdmtools
r-segmented
r-selectr
r-seqinr
r-seqlogo
r-sessioninfo
r-seurat
r-sf
r-sfsmisc
r-shape
r-shiny
r-shinydashboard
r-shinyfiles
r-shortread
r-siggenes
r-simpleaffy
r-sitmo
r-sm
r-smoof
r-sn
r-snakecase
r-snow
r-snowfall
r-snprelate
r-som
r-somaticsignatures
r-sourcetools
r-sp
r-spacetime
r-sparsem
r-spatial
r-spatialreg
r-spdata
r-spdep
r-speedglm
r-spem
r-splancs
r-splitstackshape
r-sqldf
r-squarem
r-squash
r-sseq
r-stanheaders
r-statmod
r-statnet-common
r-stringi
r-stringr
r-strucchange
r-subplex
r-summarizedexperiment
r-survey
r-survival
r-sva
r-sys
r-tarifx
r-taxizedb
r-tclust
r-tensora
r-testit
r-testthat
r-tfbstools
r-tfmpvalue
r-th-data
r-threejs
r-tibble
r-tidycensus
r-tidyr
r-tidyselect
r-tidyverse
r-tiff
r-tigris
r-timedate
r-tinytex
r-tmixclust
r-topgo
r-triebeard
r-trimcluster
r-truncnorm
r-trust
r-tseries
r-tsne
r-ttr
r-ucminf
r-udunits2
r-units
r-urca
r-urltools
r-usethis
r-utf8
r-uuid
r-uwot
r-variantannotation
r-varselrf
r-vcd
r-vctrs
r-vegan
r-vfs
r-vgam
r-vipor
r-viridis
r-viridislite
r-visnetwork
r-vsn
r-webshot
r-wgcna
r-whisker
r-withr
r-xde
r-xfun
r-xgboost
r-xlconnect
r-xlconnectjars
r-xlsx
r-xlsxjars
r-xmapbridge
r-xml
r-xml2
r-xnomial
r-xopen
r-xtable
r-xts
r-xvector
r-yaml
r-yapsa
r-yaqcaffy
r-yarn
r-zeallot
r-zip
r-zlibbioc
r-zoo
racon
raft
ragel
raja
randfold
random123
randrproto
range-v3
rankstr
rapidjson	targets: adjust packages to use new specific targets semantics	2019-09-20 00:51:37 -07:00
ravel
raxml	raxml: simplified recipe by removing SIMD variants (#12952)	2019-09-28 13:45:01 -05:00
ray
rclone
rdma-core
rdp-classifier
rdptools
re2c
readfq
readline
recon
recordproto
redis
redset
redundans
regcm	flake8: make entire repository pass spack flake8 -a	2019-09-07 23:59:10 -07:00
relax
relion
rempi
rename
rendercheck
renderproto
repeatmasker
repeatmodeler
repeatscout
resourceproto
revbayes
rgb
rhash
rlwrap
rmats
rmlab
rna-seqc
rngstreams
rocksdb	Removed references to '(-march|-mtune|-mcpu)=native' (#12948)	2019-09-26 10:02:08 +02:00
rockstar
rodinia
root	flake8: make entire repository pass spack flake8 -a	2019-09-07 23:59:10 -07:00
rose
ross	Update target comparison semantic for a few packages (#12947)	2019-09-26 10:25:12 +02:00
routino
rpcsvc-proto
rr
rsbench
rsem
rstart
rsync
rtags
rtax
ruby
ruby-gnuplot
ruby-narray
ruby-ronn
ruby-rubyinline
ruby-svn2git
ruby-terminal-table
rust
rust-bindgen
sabre
saga-gis
sailfish
salmon
sambamba
samblaster
samrai
samtools
sandbox
sas
satsuma2
savanna	Dataspaces: Fix Fetch URL, Savanna Spec (#13001)	2019-10-01 14:52:44 -07:00
saws
sbt
scala
scalasca
scallop
scalpel
scan-for-matches
scons
scorec-core
scorep
scotch
scr
screen
scripts
scrnsaverproto
sctk
sdl2	targets: adjust packages to use new specific targets semantics	2019-09-20 00:51:37 -07:00
sdl2-image
sdsl-lite
seacas
sed
sentieon-genomics
seqan
seqkit
seqprep
seqtk
serf
sessreg
setxkbmap
sga
shadow
shapeit
shared-mime-info
shiny-server
shocklibs
shoremap
shortbred
shortstack
showfont
shuffile
sickle
siesta
signalp
signify
silo
simgrid
simplemoc
simul
simulationio
singularity	Singularity 3.4.1 still needs the makefile patch (#13008)	2019-10-02 11:59:11 -05:00
singularity-legacy
sirius
skilion-onedrive
skopeo
sl
slate
sleef
slepc	petsc, slepc: add new versions - 3.12.0 (#12979)	2019-09-30 13:18:11 -05:00
slurm
smalt
smof
smproxy
snakemake
snap
snap-berkeley
snap-korf
snappy
snbone
sniffles
snpeff
snphylo
snptest
soap2
soapdenovo2
soapdenovo-trans
soapindel
soapsnp
sofa-c
somatic-sniper
sortmerna
sosflow
sowing
sox
spades
span-lite
spark
sparsehash
sparta
spdlog	spdlog: added version 1.4.1 (#12917)	2019-09-24 12:19:19 +02:00
spectrum-mpi
speex
spglib
sph2pipe
spherepack
spindle
spm
spot
sqlite	Add SQLite 3.29.0 (#12862)	2019-09-18 14:36:41 -05:00
sqlitebrowser
squashfs
squid
sra-toolkit
ssht
sspace-longread	flake8: make entire repository pass spack flake8 -a	2019-09-07 23:59:10 -07:00
sspace-standard
sst-core
sst-dumpi
sst-macro
stacks
staden-io-lib
star
star-ccm-plus
startup-notification
stat
stata
stc
steps
stow
strace	targets: adjust packages to use new specific targets semantics	2019-09-20 00:51:37 -07:00
stream
strelka
stress
string-view-lite
stringtie
structure
strumpack
sublime-text
subread	targets: adjust packages to use new specific targets semantics	2019-09-20 00:51:37 -07:00
subversion
suite-sparse
sumaclust
sundials
superlu
superlu-dist
superlu-mt
supernova
sw4lite
swap-assembler
swarm
swfft
swftools
swiftsim
swig
symengine
sympol
sz
tabix
talass
talloc
tantan
tar
targetp
task
taskd
tasmanian	added tasmanian version 7.0 to spack (#13003)	2019-10-02 18:35:49 -05:00
tassel
tau	Tau package: turn off unsupported variants by default on OSX (#12890)	2019-09-27 17:16:44 -07:00
tcl
tcl-itcl
tcl-tcllib
tcl-tclxml
tclap
tcoffee
tcptrace
tcsh
tealeaf	Removed references to '(-march|-mtune|-mcpu)=native' (#12948)	2019-09-26 10:02:08 +02:00
tecplot
templight	Update target comparison semantic for a few packages (#12947)	2019-09-26 10:25:12 +02:00
templight-tools
tetgen
tethex
texinfo
texlive
texstudio
textparser
tfel
the-platinum-searcher
the-silver-searcher
thornado-mini
thrift
thrust
tig
time
tinyxml
tinyxml2
tioga
tippecanoe
tix
tk
tldd
tmalign
tmhmm
tmux
tmuxinator
tophat
tppred
tracer
transabyss
transdecoder	The perl-uri-escape package duplicates perl-uri (#12971)	2019-09-29 09:27:42 -05:00
transposome
transset
trapproto
tree
treesub
trf
triangle
trilinos
trilinos-catalyst-ioss-adapter
trimal
trimgalore
trimmomatic
trinity	The perl-uri-escape package duplicates perl-uri (#12971)	2019-09-29 09:27:42 -05:00
trinotate
trnascan-se
turbine
turbomole
tut
twm
tycho2
typhon
typhonio
uberftp
ucx
udunits2
ufo-core
ufo-filters
umap
umoci
umpire
unblur
uncrustify
unibilium
unifyfs
unison
units
unittest-cpp
unixodbc
unuran	flake8: make entire repository pass spack flake8 -a	2019-09-07 23:59:10 -07:00
unzip
upcxx	Upcxx package: remove warning, add version 2019.9.0 (#12880)	2019-09-24 13:25:05 -07:00
uriparser	Add uriparser package (#12834)	2019-09-18 12:52:40 -05:00
usearch
util-linux	cryptsetup package: dont vendor libuuid in util-linux (#12839)	2019-09-17 11:22:10 -07:00
util-macros
uuid
uvw
valgrind
vampirtrace
vardictjava
varscan
vc
vcftools
vcsh
vdt	vdt: simplified recipe by removing SIMD variants (#12954)	2019-09-28 13:41:57 -05:00
vecgeom	flake8: make entire repository pass spack flake8 -a	2019-09-07 23:59:10 -07:00
veclibfort
vegas2
veloc
velvet	targets: adjust packages to use new specific targets semantics	2019-09-20 00:51:37 -07:00
verilator
verrou
vesta
videoproto
viennarna
viewres
vigra
vim
virtualgl
visit
vizglow
vmatch
voropp
votca-csg
votca-ctp
votca-tools
votca-xtp
vpfft
vpic
vsearch
vt
vtk
vtkh
vtkm
wannier90
warpx
wcslib	wcslib: fix darwin install name (#12868)	2019-09-18 22:44:38 -05:00
wget
wgsim
windowswmproto
wireshark
wordnet
workrave
wt
wtdbg2
wxpropgrid
wxwidgets
x11perf
xapian-core
xauth
xbacklight
xbiff
xbitmaps
xbraid
xcalc
xcb-demo
xcb-proto
xcb-util
xcb-util-cursor
xcb-util-errors
xcb-util-image
xcb-util-keysyms
xcb-util-renderutil
xcb-util-wm
xcb-util-xrm
xclip
xclipboard
xclock
xcmiscproto
xcmsdb
xcompmgr
xconsole
xcursor-themes
xcursorgen
xdbedizzy
xditview
xdm
xdmf3	xdmf3: new package (#12778)	2019-09-16 12:02:07 -04:00
xdpyinfo
xdriinfo
xedit
xerces-c
xeus
xev
xextproto
xeyes
xf86bigfontproto
xf86dga
xf86dgaproto
xf86driproto
xf86miscproto
xf86rushproto
xf86vidmodeproto
xfd
xfindproxy
xfontsel
xfs
xfsinfo
xfwp
xgamma
xgboost
xgc
xhmm
xhost
xineramaproto
xinit
xinput
xios	The perl-uri-escape package duplicates perl-uri (#12971)	2019-09-29 09:27:42 -05:00
xkbcomp
xkbdata
xkbevd
xkbprint
xkbutils
xkeyboard-config
xkill
xload
xlogo
xlsatoms
xlsclients
xlsfonts
xmag
xman
xmessage
xmh
xmlf90
xmlto
xmodmap
xmore
xorg-cf-files
xorg-docs
xorg-gtest
xorg-server
xorg-sgml-doctools
xphelloworld
xplor-nih
xplsprinters
xpr
xprehashprinterlist
xprop
xproto
xproxymanagementprotocol
xqilla
xrandr
xrdb
xrefresh
xrootd
xrx
xsbench
xscope
xsd
xsdk
xsdktrilinos
xset
xsetmode
xsetpointer
xsetroot
xsimd
xsm
xssp
xstdcmap
xtensor
xtensor-python
xterm
xtl
xtrans
xtrap
xts
xvidtune
xvinfo
xwd
xwininfo
xwud
xxhash
xz
yajl
yambo
yaml-cpp
yara
yasm
yorick
z3
zeromq
zfp	ZFP: CMake Package (#12999)	2019-10-01 23:28:36 -07:00
zip
zlib
zoltan
zsh
zstd