eea786f4e8
- remove the old LGPL license headers from all files in Spack - add SPDX headers to all files - core and most packages are (Apache-2.0 OR MIT) - a very small number of remaining packages are LGPL-2.1-only
27 lines
1.1 KiB
Python
27 lines
1.1 KiB
Python
# Copyright 2013-2018 Lawrence Livermore National Security, LLC and other
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# Spack Project Developers. See the top-level COPYRIGHT file for details.
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#
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# SPDX-License-Identifier: (Apache-2.0 OR MIT)
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from spack import *
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class RGosemsim(RPackage):
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"""The semantic comparisons of Gene Ontology (GO) annotations provide
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quantitative ways to compute similarities between genes and gene
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groups, and have became important basis for many bioinformatics
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analysis approaches. GOSemSim is an R package for semantic similarity
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computation among GO terms, sets of GO terms, gene products and gene
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clusters. GOSemSim implemented five methods proposed by Resnik,
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Schlicker, Jiang, Lin and Wang respectively."""
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homepage = "https://www.bioconductor.org/packages/GOSemSim/"
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git = "https://git.bioconductor.org/packages/GOSemSim.git"
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version('2.2.0', commit='247434790e6c8cf99e5643f569390362b8c87c52')
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depends_on('r@3.4.0:3.4.9', when='@2.2.0')
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depends_on('r-annotationdbi', type=('build', 'run'))
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depends_on('r-go-db', type=('build', 'run'))
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depends_on('r-rcpp', type=('build', 'run'))
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