24 lines
1.0 KiB
Diff
24 lines
1.0 KiB
Diff
--- a/auxprogs/bam2wig/Makefile 2020-12-11 09:40:21.000000000 -0600
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+++ b/auxprogs/bam2wig/Makefile 2021-04-07 15:20:59.573957969 -0500
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@@ -19,18 +19,8 @@
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SOURCES = $(PROGRAM)
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OBJECTS = $(SOURCES:.c=.o)
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-ifneq ($(wildcard ${TOOLDIR}/htslib/htslib/.),) # if TOOLDIR exists and contains htslib
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- INCLUDES=-I$(TOOLDIR)/htslib -I$(TOOLDIR)/htslib/htslib
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- HTSLIBS=-L$(TOOLDIR)/htslib -Wl,-rpath,$(TOOLDIR)/htslib -lhts -lcurses -lm -lz -lpthread -lcurl -lssl -lcrypto -lbz2 -llzma
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- HTSERRHINT="Check if the installed HTSlib is of version 1.10 or higher - see README.txt"
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-else
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- INCLUDES=-I/usr/include/htslib
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- HTSLIBS=-lhts -lz -lpthread
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- ifdef DEF_TOOLDIR
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- HTSERRHINT="There is no htslib folder in directory $(TOOLDIR) \n"
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- endif
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- HTSERRHINT:=$(HTSERRHINT)"Check if HTSlib is installed and of version 1.10 or higher - see README.txt"
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-endif
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+INCLUDES=-I$(HTSLIBDIR)/include/htslib
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+HTSLIBS=-L$(HTSLIBDIR)/lib -Wl,-rpath,$(HTSLIBDIR)/lib -lhts -lncurses -lm -lz -lpthread -lcurl -lssl -lcrypto -lbz2 -llzma
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CFLAGS:=-Wall -O2 $(CFLAGS)
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CC?=gcc
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