32 lines
1.1 KiB
Python
32 lines
1.1 KiB
Python
# Copyright 2013-2023 Lawrence Livermore National Security, LLC and other
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# Spack Project Developers. See the top-level COPYRIGHT file for details.
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#
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# SPDX-License-Identifier: (Apache-2.0 OR MIT)
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from spack.package import *
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class Last(MakefilePackage):
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"""LAST finds similar regions between sequences, and aligns them. It is
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designed for comparing large datasets to each other (e.g. vertebrate
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genomes and/or large numbers of DNA reads)."""
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homepage = "http://last.cbrc.jp/"
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url = "http://last.cbrc.jp/last-869.zip"
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git = "https://gitlab.com/mcfrith/last.git"
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maintainers("snehring")
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version("1282", commit="4368be912f4759e52b549940276f1adf087f489a")
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version("869", sha256="6371a6282bc1bb02a5e5013cc463625f2ce3e7746ff2ea0bdf9fe6b15605a67c")
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def edit(self, spec, prefix):
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files = ["mat-doc.sh", "mat-inc.sh", "seed-doc.sh", "seed-inc.sh"]
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if spec.satisfies("@1282:"):
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files.append("gc-inc.sh")
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with working_dir("build"):
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for f in files:
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set_executable(f)
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def install(self, spec, prefix):
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make("install", "prefix=%s" % prefix)
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