50 lines
2.3 KiB
Python
50 lines
2.3 KiB
Python
##############################################################################
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# Copyright (c) 2013-2018, Lawrence Livermore National Security, LLC.
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# Produced at the Lawrence Livermore National Laboratory.
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#
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# This file is part of Spack.
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# Created by Todd Gamblin, tgamblin@llnl.gov, All rights reserved.
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# LLNL-CODE-647188
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#
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# For details, see https://github.com/spack/spack
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# Please also see the NOTICE and LICENSE files for our notice and the LGPL.
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#
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# This program is free software; you can redistribute it and/or modify
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# it under the terms of the GNU Lesser General Public License (as
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# published by the Free Software Foundation) version 2.1, February 1999.
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#
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# This program is distributed in the hope that it will be useful, but
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# WITHOUT ANY WARRANTY; without even the IMPLIED WARRANTY OF
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# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the terms and
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# conditions of the GNU Lesser General Public License for more details.
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#
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# You should have received a copy of the GNU Lesser General Public
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# License along with this program; if not, write to the Free Software
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# Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
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##############################################################################
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from spack import *
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class PyBiomFormat(PythonPackage):
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"""The BIOM file format (canonically pronounced biome) is designed to be
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a general-use format for representing biological sample by observation
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contingency tables."""
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homepage = "https://pypi.python.org/pypi/biom-format/2.1.6"
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url = "https://pypi.io/packages/source/b/biom-format/biom-format-2.1.6.tar.gz"
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version('2.1.6', '1dd4925b74c56e8ee864d5e1973068de')
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variant('h5py', default=True, description='For use with BIOM 2.0+ files')
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depends_on('py-setuptools', type=('build', 'run'))
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depends_on('py-cython', type='build')
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depends_on('py-h5py', type=('build', 'run'), when='+h5py')
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depends_on('py-click', type=('build', 'run'))
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depends_on('py-numpy@1.3.0:', type=('build', 'run'))
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depends_on('py-future@0.16.0:', type=('build', 'run'))
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depends_on('py-scipy@0.13.0:', type=('build', 'run'))
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depends_on('py-pandas@0.19.2:', type=('build', 'run'))
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depends_on('py-six@1.10.0:', type=('build', 'run'))
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depends_on('py-pyqi', type=('build', 'run'))
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