42 lines
2.2 KiB
Python
42 lines
2.2 KiB
Python
# Copyright 2013-2021 Lawrence Livermore National Security, LLC and other
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# Spack Project Developers. See the top-level COPYRIGHT file for details.
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#
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# SPDX-License-Identifier: (Apache-2.0 OR MIT)
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from spack import *
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class RBeachmat(RPackage):
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"""Compiling Bioconductor to Handle Each Matrix Type
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Provides a consistent C++ class interface for reading from and writing
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data to a variety of commonly used matrix types. Ordinary matrices and
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several sparse/dense Matrix classes are directly supported, third-party
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S4 classes may be supported by external linkage, while all other
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matrices are handled by DelayedArray block processing."""
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homepage = "https://bioconductor.org/packages/beachmat"
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git = "https://git.bioconductor.org/packages/beachmat.git"
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version('2.6.4', commit='7d9dc6379017d723dda3e8dc9fd1f6de7fd33cdb')
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version('2.0.0', commit='2bdac6ce7b636fd16f78641a0bcc2181670107ab')
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version('1.4.0', commit='e3b7a21cae0080d077a0d40e35d1d148f088720a')
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version('1.2.1', commit='ebae81772045a314e568c2f7d73ea3b27e7bf7d8')
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version('1.0.2', commit='6bd57b91d6428ac916f46572d685d3cb01a757f7')
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depends_on('r@3.4:', type=('build', 'run'))
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depends_on('r@3.5:', when='@1.2.1:1.4.0', type=('build', 'run'))
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depends_on('r-delayedarray', type=('build', 'run'))
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depends_on('r-delayedarray@0.5.30:', when='@1.2.1', type=('build', 'run'))
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depends_on('r-delayedarray@0.7.38:', when='@1.4.0', type=('build', 'run'))
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depends_on('r-delayedarray@0.15.14:', when='@2.6.4', type=('build', 'run'))
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depends_on('r-biocgenerics', when='@1.4.0:', type=('build', 'run'))
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depends_on('r-matrix', when='@2.6.4:', type=('build', 'run'))
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depends_on('r-rhdf5lib', when='@1.0.2:1.4.0', type=('build', 'run'))
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depends_on('r-rhdf5lib@1.1.4:', when='@1.2.1', type=('build', 'run'))
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depends_on('r-hdf5array', when='@1.0.2:1.4.0', type=('build', 'run'))
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depends_on('r-hdf5array@1.7.3:', when='@1.2.1', type=('build', 'run'))
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depends_on('r-hdf5array@1.9.5:', when='@1.4.0', type=('build', 'run'))
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depends_on('r-rcpp@0.12.14:', when='@1.0.2:1.4.0', type=('build', 'run'))
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depends_on('r-rhdf5', when='@1.0.2:1.4.0', type=('build', 'run'))
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