a8ccb8e116
- [x] add `concretize.lp`, `spack.yaml`, etc. to licensed files
- [x] update all licensed files to say 2013-2021 using
`spack license update-copyright-year`
- [x] appease mypy with some additions to package.py that needed
for oneapi.py
30 lines
1.0 KiB
Python
30 lines
1.0 KiB
Python
# Copyright 2013-2021 Lawrence Livermore National Security, LLC and other
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# Spack Project Developers. See the top-level COPYRIGHT file for details.
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#
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# SPDX-License-Identifier: (Apache-2.0 OR MIT)
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from spack import *
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class Wgsim(Package):
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"""Wgsim is a small tool for simulating sequence reads from a reference
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genome.
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It is able to simulate diploid genomes with SNPs and insertion/deletion
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(INDEL) polymorphisms, and simulate reads with uniform substitution
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sequencing errors. It does not generate INDEL sequencing errors, but this
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can be partly compensated by simulating INDEL polymorphisms."""
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homepage = "https://github.com/lh3/wgsim"
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git = "https://github.com/lh3/wgsim.git"
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version('2011.10.17', commit='a12da3375ff3b51a5594d4b6fa35591173ecc229')
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depends_on('zlib')
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def install(self, spec, prefix):
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cc = Executable(spack_cc)
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cc('-g', '-O2', '-Wall', '-o', 'wgsim', 'wgsim.c', '-lz', '-lm')
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install_tree(self.stage.source_path, prefix.bin)
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