| .. |
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abinit
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abyss
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accfft
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ack
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activeharmony
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adept-utils
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adios
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adios2
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adlbx
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adol-c
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aegean
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aida
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New package: AIDA (#9094)
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2018-09-03 21:02:06 -05:00 |
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albany
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albert
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alglib
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install_tree, copy_tree can install into existing directory structures (#8289)
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2018-08-15 09:30:09 -07:00 |
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allinea-forge
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allinea-reports
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allpaths-lg
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alquimia
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alsa-lib
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amg
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AMG: update version (#9228)
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2018-09-12 14:11:05 -06:00 |
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amg2013
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Update broken codesign.llnl.gov urls (#8880)
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2018-08-03 10:25:10 -05:00 |
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amp
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ampliconnoise
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amrex
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xsdk: add slepc and amrex [and handle clang conflict wrt amrex] (#8932)
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2018-08-13 22:17:17 -07:00 |
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amrvis
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Updating amrvis to allow building with profiling support. (#9204)
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2018-09-14 17:16:35 -07:00 |
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andi
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angsd
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ant
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antlr
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ants
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ape
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aperture-photometry
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aperture-photometry: new package (#9119)
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2018-09-03 20:52:11 -05:00 |
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apex
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apple-libunwind
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apple-libunwind: new package, provides unwind
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2018-08-06 22:01:50 -07:00 |
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applewmproto
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appres
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apr
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apr-util
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aragorn
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archer
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argobots
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argobots: new package starting at 1.0b1 (#9238)
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2018-09-14 15:48:40 -07:00 |
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argp-standalone
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argtable
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arlecore
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install_tree, copy_tree can install into existing directory structures (#8289)
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2018-08-15 09:30:09 -07:00 |
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armadillo
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arpack-ng
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arpack: add version 3.6.2 (#8881)
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2018-08-03 09:53:44 -05:00 |
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arrow
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ascent
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asciidoc
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aspa
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aspcud
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aspect
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aspect: new version (#9146)
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2018-09-03 20:35:45 -05:00 |
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aspell
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aspell6-de
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Download GNU packages from mirrors (#8992)
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2018-08-15 23:27:21 -07:00 |
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aspell6-en
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Download GNU packages from mirrors (#8992)
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2018-08-15 23:27:21 -07:00 |
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aspell6-es
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Download GNU packages from mirrors (#8992)
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2018-08-15 23:27:21 -07:00 |
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aspera-cli
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assimp
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assimp: fix compile issues with intel compilers on knl/linux [a depen… (#9191)
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2018-09-08 16:18:37 -05:00 |
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astra
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astral
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astyle
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at-spi2-atk
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Packages/atk (#9002)
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2018-08-16 18:11:52 -05:00 |
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at-spi2-core
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Packages/atk (#9002)
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2018-08-16 18:11:52 -05:00 |
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atk
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atk package: hotfix #9099 (#9102)
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2018-08-28 16:35:30 -04:00 |
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atlas
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atom-dft
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install_tree, copy_tree can install into existing directory structures (#8289)
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2018-08-15 09:30:09 -07:00 |
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atompaw
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atop
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augustus
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autoconf
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Download GNU packages from mirrors (#8992)
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2018-08-15 23:27:21 -07:00 |
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autodock-vina
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install_tree, copy_tree can install into existing directory structures (#8289)
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2018-08-15 09:30:09 -07:00 |
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autogen
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Download GNU packages from mirrors (#8992)
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2018-08-15 23:27:21 -07:00 |
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automaded
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automake
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Download GNU packages from mirrors (#8992)
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2018-08-15 23:27:21 -07:00 |
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axel
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axl
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ECP VELOC Package update (#8910)
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2018-08-08 21:40:38 -04:00 |
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bamdst
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Bamdst: a new package. (#9113)
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2018-09-04 14:35:33 -05:00 |
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bamtools
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bamutil
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barrnap
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bash
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Download GNU packages from mirrors (#8992)
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2018-08-15 23:27:21 -07:00 |
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bash-completion
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bats
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bazel
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bbcp
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bbmap
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bc
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Download GNU packages from mirrors (#8992)
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2018-08-15 23:27:21 -07:00 |
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bcftools
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bcl2fastq2
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install_tree, copy_tree can install into existing directory structures (#8289)
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2018-08-15 09:30:09 -07:00 |
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bdftopcf
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bdw-gc
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bear
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beast1
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beast2
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bedops
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bedtools2
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beforelight
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benchmark
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berkeley-db
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bertini
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bib2xhtml
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bigreqsproto
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binutils
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binutils: add variant 'nls' for native language support (#9124)
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2018-08-29 20:32:41 -07:00 |
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bioawk
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install_tree, copy_tree can install into existing directory structures (#8289)
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2018-08-15 09:30:09 -07:00 |
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biopieces
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install_tree, copy_tree can install into existing directory structures (#8289)
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2018-08-15 09:30:09 -07:00 |
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bismark
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bison
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bison: add new version (#9085)
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2018-08-23 17:00:26 -05:00 |
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bitmap
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blasr
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blasr-libcpp
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blast-plus
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blat
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blaze
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blis
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Add blis package (#8925)
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2018-08-16 11:26:43 -05:00 |
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bliss
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blitz
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bmake
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bml
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bohrium
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Update bohrium version (#9020)
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2018-08-18 09:22:16 -05:00 |
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bolt
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bolt: new package starting at 1.0b1 (#9253)
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2018-09-14 15:49:36 -07:00 |
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bookleaf-cpp
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boost
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boost: add 1.68.0 (#8931)
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2018-08-09 17:08:20 -05:00 |
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boostmplcartesianproduct
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bowtie
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bowtie2
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boxlib
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bpp-core
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bpp-phyl
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bpp-seq
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bpp-suite
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bracken
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braker
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braker: add new version 2.1.0 (#8946)
|
2018-08-26 19:44:53 -05:00 |
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branson
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breakdancer
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breakdancer: fix several issues (#9251)
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2018-09-14 20:11:34 -07:00 |
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breseq
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brigand
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bsseeker2
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bucky
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bumpversion
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busco
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butter
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bwa
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bwtool
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byobu
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bzip2
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Change bzip2 download URL (#8976)
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2018-08-14 10:46:15 -06:00 |
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c-blosc
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c-lime
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caffe
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cairo
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cairomm
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caliper
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caliper: update to use unwind virtual package
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2018-08-06 22:01:50 -07:00 |
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callpath
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camellia
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candle-benchmarks
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cantera
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canu
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cap3
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cares
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cask
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casper
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install_tree, copy_tree can install into existing directory structures (#8289)
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2018-08-15 09:30:09 -07:00 |
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catalyst
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catch
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cbench
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cblas
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CBLAS: Don't hardcode BLAS library name (#9017)
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2018-08-18 11:19:24 -05:00 |
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cbtf
|
Update openspeedshop and cbtf version numbers (#9150)
|
2018-09-03 20:35:25 -05:00 |
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cbtf-argonavis
|
Update openspeedshop and cbtf version numbers (#9150)
|
2018-09-03 20:35:25 -05:00 |
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cbtf-argonavis-gui
|
qtgraph and cbtf-argonavis create proper library paths in modules (#8797)
|
2018-08-17 15:58:08 -07:00 |
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cbtf-krell
|
Update openspeedshop and cbtf version numbers (#9150)
|
2018-09-03 20:35:25 -05:00 |
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cbtf-lanl
|
Update openspeedshop and cbtf version numbers (#9150)
|
2018-09-03 20:35:25 -05:00 |
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ccache
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cctools
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cdbfasta
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cdd
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cddlib
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cdhit
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cdo
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add cdo releases 1.9.4 and 1.9.5 (#9079)
|
2018-08-23 10:27:35 -05:00 |
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ceed
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cereal
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ceres-solver
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cfitsio
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cgal
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cgm
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cgns
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channelflow
|
New package: channelflow (#9111)
|
2018-08-29 10:54:34 +02:00 |
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charliecloud
|
add Charliecloud 0.9.1 (#8902)
|
2018-08-06 17:43:00 -05:00 |
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charmpp
|
Charmpp: rename charm to charmpp according to ++ conventions (#9216)
|
2018-09-14 17:01:07 -07:00 |
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chatterbug
|
chatterbug: new spack package (#8994)
|
2018-08-18 16:18:50 -07:00 |
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check
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chlorop
|
install_tree, copy_tree can install into existing directory structures (#8289)
|
2018-08-15 09:30:09 -07:00 |
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chombo
|
install_tree, copy_tree can install into existing directory structures (#8289)
|
2018-08-15 09:30:09 -07:00 |
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cistem
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cityhash
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clamr
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clapack
|
Fix missing makefile variable in clapack package (#9016)
|
2018-08-18 11:19:40 -05:00 |
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cleaveland4
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cleverleaf
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clfft
|
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clhep
|
Add new CLHEP releases and move to sha256 hashes (#9089)
|
2018-08-24 09:49:38 -05:00 |
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clingo
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cloc
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cloog
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cloverleaf
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cloverleaf3d
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clustalo
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clustalw
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cmake
|
cmake: add version 3.12.2 (#9248)
|
2018-09-14 09:36:39 -07:00 |
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cmocka
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cmor
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cnmem
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cnpy
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cntk
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cntk1bitsgd
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codar-cheetah
|
install_tree, copy_tree can install into existing directory structures (#8289)
|
2018-08-15 09:30:09 -07:00 |
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codes
|
New package: CODES simulation framework (#9133)
|
2018-09-03 20:43:50 -05:00 |
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coevp
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cohmm
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coinhsl
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colm
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colordiff
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comd
|
ecp-proxy-apps: update dependencies for release 1.0 and 1.1 (#9217)
|
2018-09-11 15:10:49 -06:00 |
|
commons-lang
|
Add MDB driver support to GDAL (#8614)
|
2018-08-29 12:35:56 -05:00 |
|
commons-lang3
|
Add MDB driver support to GDAL (#8614)
|
2018-08-29 12:35:56 -05:00 |
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commons-logging
|
Add MDB driver support to GDAL (#8614)
|
2018-08-29 12:35:56 -05:00 |
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compiz
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compositeproto
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conduit
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constype
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converge
|
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coreutils
|
Download GNU packages from mirrors (#8992)
|
2018-08-15 23:27:21 -07:00 |
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corset
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cosmomc
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cosp2
|
install_tree, copy_tree can install into existing directory structures (#8289)
|
2018-08-15 09:30:09 -07:00 |
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cp2k
|
install_tree, copy_tree can install into existing directory structures (#8289)
|
2018-08-15 09:30:09 -07:00 |
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cppad
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|
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cppcheck
|
install_tree, copy_tree can install into existing directory structures (#8289)
|
2018-08-15 09:30:09 -07:00 |
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cppgsl
|
new package: GSL - C++ Guideline Support Library (#9091)
|
2018-08-24 17:45:18 -04:00 |
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cpprestsdk
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cppunit
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cppzmq
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cpu-features
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cpuinfo
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cram
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cryptopp
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cscope
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csdp
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ctffind
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cub
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cube
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cubelib
|
scorep: make optional packages variants (#9011)
|
2018-08-18 11:25:05 -05:00 |
|
cubew
|
scorep: make optional packages variants (#9011)
|
2018-08-18 11:25:05 -05:00 |
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cuda
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cuda-memtest
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|
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cudnn
|
install_tree, copy_tree can install into existing directory structures (#8289)
|
2018-08-15 09:30:09 -07:00 |
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cufflinks
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|
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cups
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curl
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|
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cvs
|
Download GNU packages from mirrors (#8992)
|
2018-08-15 23:27:21 -07:00 |
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czmq
|
flux: update flux-core package and add a flux-sched package (#8818)
|
2018-08-02 16:20:55 -04:00 |
|
dakota
|
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daligner
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damageproto
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damselfly
|
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darshan-runtime
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darshan-util
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dash
|
|
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datamash
|
Download GNU packages from mirrors (#8992)
|
2018-08-15 23:27:21 -07:00 |
|
dataspaces
|
|
|
|
davix
|
|
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|
dbus
|
Add version 1.12.8 to dbus (#8949)
|
2018-08-11 09:21:20 -05:00 |
|
dealii
|
xsdk: add dealii (#7529)
|
2018-09-06 19:22:17 -05:00 |
|
dealii-parameter-gui
|
|
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deconseq-standalone
|
|
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dejagnu
|
Download GNU packages from mirrors (#8992)
|
2018-08-15 23:27:21 -07:00 |
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delly2
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denovogear
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dia
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dialign-tx
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diamond
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diffsplice
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direnv
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discovar
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discovardenovo
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dislin
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dlpack
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dmd
|
Pack dlang's stdlib into dmd. (#9131)
|
2018-09-04 14:49:28 -05:00 |
|
dmlc-core
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dmtcp
|
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dmxproto
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docbook-xml
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docbook-xsl
|
|
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dos2unix
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|
|
|
double-conversion
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doxygen
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dri2proto
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dri3proto
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|
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dsdp
|
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dsrc
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dtcmp
|
|
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dyninst
|
dyninst: add dependency on libiberty (#8806)
|
2018-08-27 14:34:05 -07:00 |
|
ea-utils
|
|
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|
easybuild
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ebms
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eccodes
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|
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|
eclipse-gcj-parser
|
|
|
|
ecp-proxy-apps
|
ecp-proxy-apps: update dependencies for release 1.0 and 1.1 (#9217)
|
2018-09-11 15:10:49 -06:00 |
|
ed
|
Download GNU packages from mirrors (#8992)
|
2018-08-15 23:27:21 -07:00 |
|
editres
|
|
|
|
eigen
|
add eigen@3.3.5 (#9212)
|
2018-09-14 17:14:46 -07:00 |
|
elasticsearch
|
Added Kibana package, added Elasticsearch to 6.4.0 (#9239)
|
2018-09-14 10:50:20 -07:00 |
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elemental
|
|
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|
elfutils
|
elfutils: update version and add variants (#8891)
|
2018-08-07 14:04:05 -05:00 |
|
elk
|
|
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|
elpa
|
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emacs
|
Download GNU packages from mirrors (#8992)
|
2018-08-15 23:27:21 -07:00 |
|
emboss
|
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encodings
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environment-modules
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eospac
|
|
|
|
er
|
ECP VELOC Package update (#8910)
|
2018-08-08 21:40:38 -04:00 |
|
es
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esmf
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essl
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ethminer
|
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etsf-io
|
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everytrace
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everytrace-example
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evieext
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exabayes
|
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examinimd
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exampm
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exasp2
|
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exmcutils
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exodusii
|
|
|
|
exonerate
|
|
|
|
expat
|
|
|
|
expect
|
|
|
|
express
|
|
|
|
extrae
|
|
|
|
exuberant-ctags
|
|
|
|
f90cache
|
|
|
|
fabtests
|
|
|
|
falcon
|
|
|
|
farmhash
|
install_tree, copy_tree can install into existing directory structures (#8289)
|
2018-08-15 09:30:09 -07:00 |
|
fast-gbs
|
|
|
|
fast-global-file-status
|
add fgfs variant to stat and develop version (#8919)
|
2018-08-09 10:56:08 -05:00 |
|
fasta
|
Add package for fasta (#8953)
|
2018-08-11 11:38:31 -05:00 |
|
fastjar
|
|
|
|
fastmath
|
|
|
|
fastme
|
|
|
|
fastphase
|
|
|
|
fastq-screen
|
|
|
|
fastqc
|
install_tree, copy_tree can install into existing directory structures (#8289)
|
2018-08-15 09:30:09 -07:00 |
|
fastqvalidator
|
|
|
|
fasttree
|
|
|
|
fastx-toolkit
|
|
|
|
fenics
|
|
|
|
fermi
|
|
|
|
fermikit
|
|
|
|
fermisciencetools
|
install_tree, copy_tree can install into existing directory structures (#8289)
|
2018-08-15 09:30:09 -07:00 |
|
ferret
|
|
|
|
ffmpeg
|
|
|
|
fftw
|
|
|
|
fimpute
|
|
|
|
findutils
|
Download GNU packages from mirrors (#8992)
|
2018-08-15 23:27:21 -07:00 |
|
fio
|
|
|
|
fish
|
|
|
|
fixesproto
|
|
|
|
flac
|
|
|
|
flang
|
Package/flang: Updated to use own version of llvm (#8766)
|
2018-08-03 20:35:09 -04:00 |
|
flann
|
patch flann // gcc // cmake@3.11+ (#9214)
|
2018-09-14 17:01:58 -07:00 |
|
flash
|
|
|
|
flatbuffers
|
|
|
|
flecsale
|
|
|
|
flecsi
|
flecsi: fix build (#9129)
|
2018-08-29 09:23:02 -06:00 |
|
flex
|
|
|
|
flint
|
|
|
|
flit
|
|
|
|
fltk
|
|
|
|
flux-core
|
flux: update flux-core package and add a flux-sched package (#8818)
|
2018-08-02 16:20:55 -04:00 |
|
flux-sched
|
flux: update flux-core package and add a flux-sched package (#8818)
|
2018-08-02 16:20:55 -04:00 |
|
fluxbox
|
Replace pkg-config dependencies with virtual (#8783)
|
2018-08-02 13:29:04 -04:00 |
|
fmt
|
|
|
|
foam-extend
|
install_tree: symlink handling and add 'ignore' option (#9019)
|
2018-08-17 22:08:38 -04:00 |
|
folly
|
|
|
|
font-adobe-75dpi
|
|
|
|
font-adobe-100dpi
|
|
|
|
font-adobe-utopia-75dpi
|
|
|
|
font-adobe-utopia-100dpi
|
|
|
|
font-adobe-utopia-type1
|
|
|
|
font-alias
|
|
|
|
font-arabic-misc
|
|
|
|
font-bh-75dpi
|
|
|
|
font-bh-100dpi
|
|
|
|
font-bh-lucidatypewriter-75dpi
|
|
|
|
font-bh-lucidatypewriter-100dpi
|
|
|
|
font-bh-ttf
|
|
|
|
font-bh-type1
|
|
|
|
font-bitstream-75dpi
|
|
|
|
font-bitstream-100dpi
|
|
|
|
font-bitstream-speedo
|
|
|
|
font-bitstream-type1
|
|
|
|
font-cronyx-cyrillic
|
|
|
|
font-cursor-misc
|
|
|
|
font-daewoo-misc
|
|
|
|
font-dec-misc
|
|
|
|
font-ibm-type1
|
|
|
|
font-isas-misc
|
|
|
|
font-jis-misc
|
|
|
|
font-micro-misc
|
|
|
|
font-misc-cyrillic
|
|
|
|
font-misc-ethiopic
|
|
|
|
font-misc-meltho
|
|
|
|
font-misc-misc
|
|
|
|
font-mutt-misc
|
|
|
|
font-schumacher-misc
|
|
|
|
font-screen-cyrillic
|
|
|
|
font-sony-misc
|
|
|
|
font-sun-misc
|
|
|
|
font-util
|
|
|
|
font-winitzki-cyrillic
|
|
|
|
font-xfree86-type1
|
|
|
|
fontcacheproto
|
|
|
|
fontconfig
|
|
|
|
fontsproto
|
|
|
|
fonttosfnt
|
|
|
|
fp16
|
|
|
|
fpc
|
|
|
|
fr-hit
|
|
|
|
freebayes
|
|
|
|
freeglut
|
|
|
|
freetype
|
|
|
|
fseq
|
|
|
|
fsl
|
install_tree, copy_tree can install into existing directory structures (#8289)
|
2018-08-15 09:30:09 -07:00 |
|
fslsfonts
|
|
|
|
fstobdf
|
|
|
|
ftgl
|
|
|
|
funhpc
|
|
|
|
fyba
|
|
|
|
gapbs
|
|
|
|
gapcloser
|
|
|
|
gapfiller
|
|
|
|
gasnet
|
gasnet:version bump (#9127)
|
2018-08-29 06:48:52 +02:00 |
|
gatk
|
gatk: new version (#9202)
|
2018-09-14 13:55:52 -07:00 |
|
gaussian
|
install_tree, copy_tree can install into existing directory structures (#8289)
|
2018-08-15 09:30:09 -07:00 |
|
gawk
|
Download GNU packages from mirrors (#8992)
|
2018-08-15 23:27:21 -07:00 |
|
gblocks
|
|
|
|
gcc
|
Download GNU packages from mirrors (#8992)
|
2018-08-15 23:27:21 -07:00 |
|
gccmakedep
|
|
|
|
gccxml
|
|
|
|
gconf
|
|
|
|
gcta
|
|
|
|
gdal
|
GDAL: add version 2.3.1 (#9156)
|
2018-09-01 07:32:24 -05:00 |
|
gdb
|
gdb: add version 8.2 (#9246)
|
2018-09-14 13:56:15 -07:00 |
|
gdbm
|
Download GNU packages from mirrors (#8992)
|
2018-08-15 23:27:21 -07:00 |
|
gdk-pixbuf
|
|
|
|
gdl
|
|
|
|
geant4
|
|
|
|
gearshifft
|
|
|
|
gemmlowp
|
|
|
|
genemark-et
|
|
|
|
genomefinisher
|
install_tree, copy_tree can install into existing directory structures (#8289)
|
2018-08-15 09:30:09 -07:00 |
|
genometools
|
|
|
|
geopm
|
|
|
|
geos
|
|
|
|
gettext
|
Download GNU packages from mirrors (#8992)
|
2018-08-15 23:27:21 -07:00 |
|
gflags
|
|
|
|
ghost
|
|
|
|
ghostscript
|
|
|
|
ghostscript-fonts
|
|
|
|
giflib
|
|
|
|
git
|
install_tree, copy_tree can install into existing directory structures (#8289)
|
2018-08-15 09:30:09 -07:00 |
|
git-imerge
|
|
|
|
git-lfs
|
|
|
|
gl2ps
|
|
|
|
glew
|
|
|
|
glfmultiples
|
|
|
|
glib
|
glib: Add 2.56.2 (#9071)
|
2018-08-22 14:21:54 -05:00 |
|
glibmm
|
|
|
|
glimmer
|
|
|
|
glm
|
|
|
|
global
|
|
|
|
globalarrays
|
|
|
|
globus-toolkit
|
|
|
|
glog
|
|
|
|
gloo
|
|
|
|
glpk
|
Download GNU packages from mirrors (#8992)
|
2018-08-15 23:27:21 -07:00 |
|
glproto
|
|
|
|
glvis
|
Add libs attribute to mesa and mesa-glu packages (#8904)
|
2018-08-07 10:18:05 +02:00 |
|
gmake
|
Download GNU packages from mirrors (#8992)
|
2018-08-15 23:27:21 -07:00 |
|
gmap-gsnap
|
|
|
|
gmime
|
|
|
|
gmodel
|
gmodel: new package starting at 2.1.0 (#9170)
|
2018-09-06 10:48:08 +02:00 |
|
gmp
|
Download GNU packages from mirrors (#8992)
|
2018-08-15 23:27:21 -07:00 |
|
gmsh
|
gmsh: add git master and 4.0.0 versions (#9172)
|
2018-09-06 10:42:40 +02:00 |
|
gnat
|
|
|
|
gnu-prolog
|
|
|
|
gnupg
|
|
|
|
gnuplot
|
|
|
|
gnutls
|
|
|
|
go
|
go: Update to 1.11 (#9101)
|
2018-08-29 07:00:40 +02:00 |
|
go-bootstrap
|
install_tree, copy_tree can install into existing directory structures (#8289)
|
2018-08-15 09:30:09 -07:00 |
|
gobject-introspection
|
|
|
|
googletest
|
|
|
|
gotcha
|
|
|
|
gource
|
|
|
|
gperf
|
Download GNU packages from mirrors (#8992)
|
2018-08-15 23:27:21 -07:00 |
|
gperftools
|
gperftools@2.7: new version; homepage, URL, hash updates (#9010)
|
2018-08-16 19:38:02 -05:00 |
|
gplates
|
|
|
|
grackle
|
install_tree, copy_tree can install into existing directory structures (#8289)
|
2018-08-15 09:30:09 -07:00 |
|
gradle
|
install_tree, copy_tree can install into existing directory structures (#8289)
|
2018-08-15 09:30:09 -07:00 |
|
grandr
|
|
|
|
graph500
|
|
|
|
graphicsmagick
|
|
|
|
graphlib
|
|
|
|
graphmap
|
|
|
|
graphviz
|
Replace pkg-config dependencies with virtual (#8783)
|
2018-08-02 13:29:04 -04:00 |
|
grass
|
grass improvement: specify proj data directory (#8984)
|
2018-08-15 09:54:08 -05:00 |
|
grib-api
|
|
|
|
grnboost
|
New package: GRNBoost (#8763)
|
2018-08-02 13:46:36 -04:00 |
|
groff
|
Download GNU packages from mirrors (#8992)
|
2018-08-15 23:27:21 -07:00 |
|
gromacs
|
Add version 5.1.5 for gromacs. (#8948)
|
2018-08-11 09:21:32 -05:00 |
|
gsl
|
Download GNU packages from mirrors (#8992)
|
2018-08-15 23:27:21 -07:00 |
|
gslib
|
|
|
|
gtkmm
|
|
|
|
gtkorvo-atl
|
|
|
|
gtkorvo-cercs-env
|
|
|
|
gtkorvo-dill
|
|
|
|
gtkorvo-enet
|
|
|
|
gtkplus
|
|
|
|
gts
|
|
|
|
guidance
|
|
|
|
guile
|
Download GNU packages from mirrors (#8992)
|
2018-08-15 23:27:21 -07:00 |
|
gurobi
|
install_tree, copy_tree can install into existing directory structures (#8289)
|
2018-08-15 09:30:09 -07:00 |
|
h5hut
|
|
|
|
h5part
|
|
|
|
h5utils
|
|
|
|
h5z-zfp
|
|
|
|
hacckernels
|
|
|
|
hadoop
|
|
|
|
halc
|
|
|
|
hapcut2
|
|
|
|
hapdip
|
|
|
|
haploview
|
|
|
|
harfbuzz
|
|
|
|
harminv
|
|
|
|
hdf
|
|
|
|
hdf5
|
hdf5@1.10.3: new version (#9121)
|
2018-08-29 10:58:24 +02:00 |
|
hdf5-blosc
|
install_tree, copy_tree can install into existing directory structures (#8289)
|
2018-08-15 09:30:09 -07:00 |
|
help2man
|
Download GNU packages from mirrors (#8992)
|
2018-08-15 23:27:21 -07:00 |
|
hepmc
|
|
|
|
heppdt
|
|
|
|
hic-pro
|
|
|
|
highfive
|
|
|
|
highwayhash
|
|
|
|
hiop
|
|
|
|
hisat2
|
|
|
|
hisea
|
|
|
|
hmmer
|
|
|
|
hoomd-blue
|
|
|
|
hpccg
|
|
|
|
hpctoolkit
|
|
|
|
hpctoolkit-externals
|
|
|
|
hpgmg
|
|
|
|
hpl
|
|
|
|
hpx
|
|
|
|
hpx5
|
|
|
|
hsakmt
|
|
|
|
hstr
|
|
|
|
htop
|
htop: add version 2.2.0 (#9086)
|
2018-08-23 18:50:01 -05:00 |
|
htslib
|
Add samtools 1.9 (#8961)
|
2018-08-12 18:54:50 -05:00 |
|
httpie
|
|
|
|
hub
|
|
|
|
hunspell
|
|
|
|
hwloc
|
Hwloc add update 2.0.2 (#9244)
|
2018-09-14 10:48:38 -07:00 |
|
hybpiper
|
|
|
|
hydra
|
|
|
|
hydrogen
|
|
|
|
hypre
|
hypre: patch +shared@2.13.0: on darwin (#9220)
|
2018-09-14 17:14:30 -07:00 |
|
i3
|
Replace pkg-config dependencies with virtual (#8783)
|
2018-08-02 13:29:04 -04:00 |
|
ibmisc
|
|
|
|
iceauth
|
|
|
|
icedtea
|
Java updates: new versions, classpath, and JAVA_HOME (#8613)
|
2018-08-28 14:35:13 -04:00 |
|
icet
|
|
|
|
ico
|
|
|
|
icu4c
|
|
|
|
id3lib
|
|
|
|
idba
|
|
|
|
igraph
|
|
|
|
igv
|
|
|
|
igvtools
|
install_tree, copy_tree can install into existing directory structures (#8289)
|
2018-08-15 09:30:09 -07:00 |
|
ilmbase
|
|
|
|
image-magick
|
|
|
|
imake
|
|
|
|
imp
|
|
|
|
impute2
|
|
|
|
infernal
|
|
|
|
inputproto
|
|
|
|
intel
|
Intel prefixes (#7469)
|
2018-08-29 21:09:34 -07:00 |
|
intel-daal
|
Intel prefixes (#7469)
|
2018-08-29 21:09:34 -07:00 |
|
intel-gpu-tools
|
|
|
|
intel-ipp
|
Intel prefixes (#7469)
|
2018-08-29 21:09:34 -07:00 |
|
intel-mkl
|
Intel prefixes (#7469)
|
2018-08-29 21:09:34 -07:00 |
|
intel-mkl-dnn
|
|
|
|
intel-mpi
|
Intel prefixes (#7469)
|
2018-08-29 21:09:34 -07:00 |
|
intel-parallel-studio
|
Intel prefixes (#7469)
|
2018-08-29 21:09:34 -07:00 |
|
intel-tbb
|
update Intel packages (2018.u5 for TBB and 2018.u3 for the others) (#8928)
|
2018-08-20 07:56:53 -05:00 |
|
intel-xed
|
|
|
|
intltool
|
|
|
|
ior
|
|
|
|
iozone
|
|
|
|
iperf2
|
|
|
|
iperf3
|
|
|
|
ipopt
|
ipopt: add debug variant (#9223)
|
2018-09-14 15:53:25 -07:00 |
|
isaac
|
|
|
|
isaac-server
|
|
|
|
isl
|
|
|
|
itstool
|
|
|
|
itsx
|
|
|
|
jackcess
|
Add MDB driver support to GDAL (#8614)
|
2018-08-29 12:35:56 -05:00 |
|
jags
|
|
|
|
jansson
|
|
|
|
jasper
|
|
|
|
jbigkit
|
|
|
|
jchronoss
|
|
|
|
jdk
|
jdk: added 10.0.2_13 (#9203)
|
2018-09-14 17:17:32 -07:00 |
|
jellyfish
|
|
|
|
jemalloc
|
|
|
|
jmol
|
install_tree, copy_tree can install into existing directory structures (#8289)
|
2018-08-15 09:30:09 -07:00 |
|
jq
|
|
|
|
json-c
|
|
|
|
json-cwx
|
|
|
|
json-glib
|
|
|
|
jsoncpp
|
|
|
|
judy
|
|
|
|
julia
|
|
|
|
k8
|
|
|
|
kahip
|
|
|
|
kaiju
|
|
|
|
kaks-calculator
|
|
|
|
kaldi
|
install_tree, copy_tree can install into existing directory structures (#8289)
|
2018-08-15 09:30:09 -07:00 |
|
kallisto
|
|
|
|
kbproto
|
|
|
|
kdiff3
|
|
|
|
kealib
|
|
|
|
kentutils
|
|
|
|
kibana
|
Added Kibana package, added Elasticsearch to 6.4.0 (#9239)
|
2018-09-14 10:50:20 -07:00 |
|
kim-api
|
kim-api: initial commit (#8873)
|
2018-08-04 16:47:35 -05:00 |
|
kmergenie
|
|
|
|
kokkos
|
|
|
|
kraken
|
|
|
|
krb5
|
|
|
|
krims
|
|
|
|
kripke
|
Update broken codesign.llnl.gov urls (#8880)
|
2018-08-03 10:25:10 -05:00 |
|
kvasir-mpl
|
|
|
|
kvtree
|
ECP VELOC Package update (#8910)
|
2018-08-08 21:40:38 -04:00 |
|
laghos
|
Update homepage for laghos (#8864)
|
2018-08-02 13:03:52 -04:00 |
|
lammps
|
lammps: add v20180822 (#9081)
|
2018-08-23 12:17:27 -05:00 |
|
last
|
|
|
|
latte
|
|
|
|
launchmon
|
|
|
|
lazyten
|
|
|
|
lbann
|
|
|
|
lbxproxy
|
|
|
|
lcals
|
Update broken codesign.llnl.gov urls (#8880)
|
2018-08-03 10:25:10 -05:00 |
|
lcms
|
|
|
|
ldc
|
|
|
|
ldc-bootstrap
|
|
|
|
legion
|
|
|
|
leveldb
|
leveldb: Fix header installation (#9069)
|
2018-08-22 09:46:11 -05:00 |
|
lftp
|
|
|
|
libaec
|
|
|
|
libaio
|
|
|
|
libapplewm
|
|
|
|
libarchive
|
|
|
|
libassuan
|
|
|
|
libatomic-ops
|
|
|
|
libbeagle
|
|
|
|
libbeato
|
|
|
|
libbsd
|
|
|
|
libbson
|
|
|
|
libcanberra
|
|
|
|
libcap
|
|
|
|
libceed
|
|
|
|
libcerf
|
|
|
|
libcheck
|
|
|
|
libcint
|
libcint: New version 3.0.12 (#9003)
|
2018-08-16 15:59:26 -05:00 |
|
libcircle
|
|
|
|
libconfig
|
|
|
|
libcroco
|
|
|
|
libctl
|
|
|
|
libdivsufsort
|
|
|
|
libdmx
|
|
|
|
libdrm
|
|
|
|
libdwarf
|
libdwarf: remove use of hide_files()
|
2018-08-02 19:00:52 -07:00 |
|
libedit
|
|
|
|
libelf
|
|
|
|
libemos
|
|
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|
libepoxy
|
|
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|
libev
|
|
|
|
libevent
|
|
|
|
libevpath
|
|
|
|
libfabric
|
libfabric: Add develop version option. (#9074)
|
2018-08-22 14:21:30 -05:00 |
|
libffi
|
Build Python 3.7 with external libffi. (#9245)
|
2018-09-14 17:07:13 -07:00 |
|
libffs
|
|
|
|
libfontenc
|
|
|
|
libfs
|
|
|
|
libgcrypt
|
|
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|
libgd
|
|
|
|
libgeotiff
|
|
|
|
libgit2
|
|
|
|
libgpg-error
|
|
|
|
libgpuarray
|
|
|
|
libgridxc
|
install_tree, copy_tree can install into existing directory structures (#8289)
|
2018-08-15 09:30:09 -07:00 |
|
libgtextutils
|
|
|
|
libharu
|
|
|
|
libhio
|
|
|
|
libiberty
|
Download GNU packages from mirrors (#8992)
|
2018-08-15 23:27:21 -07:00 |
|
libice
|
|
|
|
libiconv
|
Download GNU packages from mirrors (#8992)
|
2018-08-15 23:27:21 -07:00 |
|
libint
|
|
|
|
libjpeg
|
|
|
|
libjpeg-turbo
|
|
|
|
libksba
|
|
|
|
liblbxutil
|
|
|
|
liblockfile
|
|
|
|
libmatheval
|
Download GNU packages from mirrors (#8992)
|
2018-08-15 23:27:21 -07:00 |
|
libmaxminddb
|
|
|
|
libmesh
|
libMesh: New variant and updated recent versions. (#9186)
|
2018-09-07 21:13:34 -07:00 |
|
libmng
|
|
|
|
libmongoc
|
libmongoc: Fix build (#9012)
|
2018-08-17 08:22:30 -05:00 |
|
libmonitor
|
libmonitor: update version and add variant to configure (#8834)
|
2018-08-03 14:00:12 -04:00 |
|
libnbc
|
|
|
|
libnl
|
|
|
|
libnova
|
|
|
|
libogg
|
|
|
|
liboldx
|
|
|
|
libpcap
|
|
|
|
libpciaccess
|
|
|
|
libpfm4
|
|
|
|
libpipeline
|
|
|
|
libpng
|
libpng package: add version (#9142)
|
2018-08-31 10:26:13 -07:00 |
|
libpsl
|
|
|
|
libpthread-stubs
|
|
|
|
libquo
|
libquo: Packaging updates. (#9076)
|
2018-08-22 23:17:15 -05:00 |
|
librom
|
|
|
|
libshm
|
|
|
|
libsigcpp
|
|
|
|
libsigsegv
|
Download GNU packages from mirrors (#8992)
|
2018-08-15 23:27:21 -07:00 |
|
libsm
|
|
|
|
libsodium
|
|
|
|
libspatialindex
|
|
|
|
libsplash
|
|
|
|
libssh
|
|
|
|
libssh2
|
|
|
|
libsvm
|
|
|
|
libszip
|
|
|
|
libtermkey
|
|
|
|
libtiff
|
|
|
|
libtool
|
Download GNU packages from mirrors (#8992)
|
2018-08-15 23:27:21 -07:00 |
|
libunistring
|
Download GNU packages from mirrors (#8992)
|
2018-08-15 23:27:21 -07:00 |
|
libunwind
|
libunwind: add version 1.3-rc1 and variant xz (#8989)
|
2018-08-17 08:22:04 -05:00 |
|
libuuid
|
|
|
|
libuv
|
|
|
|
libvorbis
|
|
|
|
libvterm
|
|
|
|
libwebsockets
|
|
|
|
libwindowswm
|
|
|
|
libx11
|
|
|
|
libxau
|
|
|
|
libxaw
|
|
|
|
libxaw3d
|
|
|
|
libxc
|
|
|
|
libxcb
|
|
|
|
libxcomposite
|
|
|
|
libxcursor
|
|
|
|
libxdamage
|
|
|
|
libxdmcp
|
|
|
|
libxevie
|
|
|
|
libxext
|
|
|
|
libxfixes
|
|
|
|
libxfont
|
|
|
|
libxfont2
|
|
|
|
libxfontcache
|
|
|
|
libxft
|
|
|
|
libxi
|
|
|
|
libxinerama
|
|
|
|
libxkbcommon
|
|
|
|
libxkbfile
|
|
|
|
libxkbui
|
|
|
|
libxml2
|
|
|
|
libxmu
|
|
|
|
libxp
|
|
|
|
libxpm
|
|
|
|
libxpresent
|
|
|
|
libxprintapputil
|
|
|
|
libxprintutil
|
|
|
|
libxrandr
|
|
|
|
libxrender
|
|
|
|
libxres
|
|
|
|
libxscrnsaver
|
|
|
|
libxshmfence
|
|
|
|
libxslt
|
|
|
|
libxsmm
|
|
|
|
libxstream
|
|
|
|
libxt
|
|
|
|
libxtrap
|
|
|
|
libxtst
|
|
|
|
libxv
|
|
|
|
libxvmc
|
|
|
|
libxxf86dga
|
|
|
|
libxxf86misc
|
|
|
|
libxxf86vm
|
|
|
|
libyogrt
|
|
|
|
libzip
|
|
|
|
likwid
|
LIKWID: Switch to perf_event backend to allow user installations but with limited features (#8886)
|
2018-08-06 09:21:30 -05:00 |
|
linkphase3
|
|
|
|
linux-headers
|
|
|
|
listres
|
|
|
|
llvm
|
install_tree, copy_tree can install into existing directory structures (#8289)
|
2018-08-15 09:30:09 -07:00 |
|
llvm-openmp-ompt
|
|
|
|
lmdb
|
|
|
|
lmod
|
|
|
|
lndir
|
|
|
|
log4cplus
|
|
|
|
log4cxx
|
|
|
|
loki
|
|
|
|
lordec
|
|
|
|
lrslib
|
|
|
|
lrzip
|
|
|
|
lsof
|
|
|
|
ltrace
|
|
|
|
lua
|
Add unzip runtime dependency to lua package (#8831)
|
2018-08-05 13:26:22 -05:00 |
|
lua-bitlib
|
|
|
|
lua-jit
|
|
|
|
lua-lpeg
|
|
|
|
lua-luafilesystem
|
|
|
|
lua-luaposix
|
|
|
|
lua-mpack
|
|
|
|
luit
|
|
|
|
lulesh
|
Update broken codesign.llnl.gov urls (#8880)
|
2018-08-03 10:25:10 -05:00 |
|
lumpy-sv
|
|
|
|
lwgrp
|
|
|
|
lwm2
|
|
|
|
lz4
|
|
|
|
lzma
|
|
|
|
lzo
|
|
|
|
m4
|
Download GNU packages from mirrors (#8992)
|
2018-08-15 23:27:21 -07:00 |
|
macsio
|
|
|
|
mad-numdiff
|
|
|
|
mafft
|
|
|
|
magics
|
|
|
|
magma
|
|
|
|
makedepend
|
|
|
|
mallocmc
|
|
|
|
man-db
|
|
|
|
manta
|
|
|
|
maq
|
|
|
|
mariadb
|
|
|
|
masa
|
|
|
|
masurca
|
install_tree, copy_tree can install into existing directory structures (#8289)
|
2018-08-15 09:30:09 -07:00 |
|
matio
|
|
|
|
matlab
|
|
|
|
maven
|
install_tree, copy_tree can install into existing directory structures (#8289)
|
2018-08-15 09:30:09 -07:00 |
|
maverick
|
|
|
|
mawk
|
|
|
|
mbedtls
|
|
|
|
mc
|
Replace pkg-config dependencies with virtual (#8783)
|
2018-08-02 13:29:04 -04:00 |
|
mcl
|
|
|
|
mdtest
|
|
|
|
med
|
|
|
|
meep
|
|
|
|
mefit
|
install_tree, copy_tree can install into existing directory structures (#8289)
|
2018-08-15 09:30:09 -07:00 |
|
megahit
|
|
|
|
memaxes
|
|
|
|
meme
|
|
|
|
memkind
|
|
|
|
meraculous
|
|
|
|
mercurial
|
|
|
|
mesa
|
Add libs attribute to mesa and mesa-glu packages (#8904)
|
2018-08-07 10:18:05 +02:00 |
|
mesa-glu
|
Add libs attribute to mesa and mesa-glu packages (#8904)
|
2018-08-07 10:18:05 +02:00 |
|
meshkit
|
|
|
|
meson
|
|
|
|
mesquite
|
|
|
|
metabat
|
|
|
|
metaphysicl
|
|
|
|
metasv
|
metasv: add required dependencies (#9254)
|
2018-09-14 15:49:11 -07:00 |
|
metis
|
|
|
|
mfem
|
install_tree, copy_tree can install into existing directory structures (#8289)
|
2018-08-15 09:30:09 -07:00 |
|
microbiomeutil
|
|
|
|
minced
|
|
|
|
mindthegap
|
|
|
|
miniaero
|
|
|
|
miniamr
|
miniamr: added v1.4.1 (#9225)
|
2018-09-14 16:56:59 -07:00 |
|
miniasm
|
|
|
|
miniconda2
|
|
|
|
miniconda3
|
|
|
|
minife
|
|
|
|
minighost
|
|
|
|
minigmg
|
|
|
|
minimap2
|
|
|
|
minimd
|
|
|
|
miniqmc
|
miniQMC: add newer releases and ecp-proxy-app tag (#9233)
|
2018-09-14 15:54:21 -07:00 |
|
minisign
|
|
|
|
minismac2d
|
|
|
|
minitri
|
|
|
|
minixyce
|
|
|
|
minuit
|
|
|
|
mira
|
|
|
|
mirdeep2
|
|
|
|
mitofates
|
|
|
|
mitos
|
|
|
|
mkfontdir
|
|
|
|
mkfontscale
|
|
|
|
mlhka
|
|
|
|
moab
|
|
|
|
modern-wheel
|
|
|
|
mofem-cephas
|
|
|
|
mofem-fracture-module
|
|
|
|
mofem-minimal-surface-equation
|
|
|
|
mofem-users-modules
|
|
|
|
molcas
|
|
|
|
mono
|
|
|
|
mosh
|
|
|
|
mothur
|
|
|
|
motif
|
|
|
|
motioncor2
|
motioncor2 - added version 1.1.0 and removed old, unlisted versions (#9229)
|
2018-09-14 13:57:22 -07:00 |
|
mount-point-attributes
|
add fgfs variant to stat and develop version (#8919)
|
2018-08-09 10:56:08 -05:00 |
|
mozjs
|
|
|
|
mpark-variant
|
|
|
|
mpc
|
Download GNU packages from mirrors (#8992)
|
2018-08-15 23:27:21 -07:00 |
|
mpe2
|
|
|
|
mpest
|
|
|
|
mpfr
|
Download GNU packages from mirrors (#8992)
|
2018-08-15 23:27:21 -07:00 |
|
mpibash
|
|
|
|
mpiblast
|
|
|
|
mpich
|
|
|
|
mpifileutils
|
mpifileutils: add v0.8 (#9152)
|
2018-09-03 20:34:07 -05:00 |
|
mpilander
|
|
|
|
mpileaks
|
|
|
|
mpip
|
|
|
|
mpir
|
|
|
|
mpix-launch-swift
|
install_tree, copy_tree can install into existing directory structures (#8289)
|
2018-08-15 09:30:09 -07:00 |
|
mrbayes
|
|
|
|
mrnet
|
|
|
|
mrtrix3
|
install_tree, copy_tree can install into existing directory structures (#8289)
|
2018-08-15 09:30:09 -07:00 |
|
mscgen
|
|
|
|
msgpack-c
|
msgpack-c, snappy: explicitly depend on googletest (#9167)
|
2018-09-03 20:25:17 -05:00 |
|
mshadow
|
|
|
|
multitail
|
|
|
|
multiverso
|
|
|
|
mummer
|
|
|
|
mumps
|
Change MUMPS to allow it to build with clang+xlf compiler combination (#8388)
|
2018-08-02 14:23:37 -04:00 |
|
munge
|
|
|
|
muparser
|
|
|
|
muscle
|
|
|
|
muse
|
|
|
|
muster
|
|
|
|
mvapich2
|
mvapich2: Use rdma-core for mrail and nemesis*ib* fabrics (#9072)
|
2018-08-23 07:32:46 -05:00 |
|
mxml
|
|
|
|
mxnet
|
mxnet: added 1.3.0 (#9236)
|
2018-09-14 11:01:30 -07:00 |
|
nag
|
|
|
|
nalu
|
|
|
|
nalu-wind
|
|
|
|
namd
|
Charmpp: rename charm to charmpp according to ++ conventions (#9216)
|
2018-09-14 17:01:07 -07:00 |
|
nano
|
|
|
|
nanoflann
|
|
|
|
nanopb
|
|
|
|
nasm
|
|
|
|
nauty
|
|
|
|
ncbi-magicblast
|
|
|
|
ncbi-rmblastn
|
|
|
|
ncbi-toolkit
|
|
|
|
nccl
|
|
|
|
nccmp
|
|
|
|
ncdu
|
|
|
|
ncftp
|
|
|
|
ncl
|
install_tree, copy_tree can install into existing directory structures (#8289)
|
2018-08-15 09:30:09 -07:00 |
|
nco
|
|
|
|
ncurses
|
Download GNU packages from mirrors (#8992)
|
2018-08-15 23:27:21 -07:00 |
|
ncview
|
|
|
|
ndiff
|
|
|
|
nek5000
|
|
|
|
nekbone
|
fix for issue #8845 (#8988)
|
2018-08-16 13:22:44 -06:00 |
|
nekcem
|
|
|
|
nektar
|
|
|
|
neovim
|
package neovim: add info for version 0.3.1 (#8866)
|
2018-08-02 13:04:59 -04:00 |
|
nest
|
New package: NEST Simulator (#9092)
|
2018-08-29 13:30:29 -04:00 |
|
netcdf
|
|
|
|
netcdf-cxx
|
|
|
|
netcdf-cxx4
|
|
|
|
netcdf-fortran
|
|
|
|
netgauge
|
|
|
|
netgen
|
|
|
|
netlib-lapack
|
|
|
|
netlib-scalapack
|
|
|
|
netlib-xblas
|
|
|
|
nettle
|
Download GNU packages from mirrors (#8992)
|
2018-08-15 23:27:21 -07:00 |
|
neuron
|
Replace pkg-config dependencies with virtual (#8783)
|
2018-08-02 13:29:04 -04:00 |
|
nextflow
|
|
|
|
nfft
|
|
|
|
nghttp2
|
|
|
|
nginx
|
|
|
|
ngmlr
|
|
|
|
ninja
|
|
|
|
ninja-fortran
|
|
|
|
nlohmann-json
|
|
|
|
nlopt
|
nlopt: Only support release>=2.5.0, since earlier release tarballs were actually AutoTools, not CMake. (#9110)
|
2018-09-03 20:56:48 -05:00 |
|
nmap
|
|
|
|
nnvm
|
|
|
|
node-js
|
|
|
|
notmuch
|
|
|
|
npb
|
|
|
|
npm
|
|
|
|
npth
|
|
|
|
nspr
|
|
|
|
numactl
|
|
|
|
numdiff
|
|
|
|
nut
|
|
|
|
nwchem
|
NWChem 6.8.1 (#9140)
|
2018-09-03 20:36:49 -05:00 |
|
ocaml
|
|
|
|
occa
|
install_tree, copy_tree can install into existing directory structures (#8289)
|
2018-08-15 09:30:09 -07:00 |
|
oce
|
|
|
|
oclint
|
|
|
|
oclock
|
|
|
|
octave
|
Java updates: new versions, classpath, and JAVA_HOME (#8613)
|
2018-08-28 14:35:13 -04:00 |
|
octave-optim
|
|
|
|
octave-splines
|
|
|
|
octave-struct
|
|
|
|
octopus
|
|
|
|
of-adios-write
|
|
|
|
of-precice
|
|
|
|
omega-h
|
omega-h: add versions and variants (#9169)
|
2018-09-05 11:01:45 -07:00 |
|
ompss
|
|
|
|
ompt-openmp
|
|
|
|
oniguruma
|
|
|
|
ont-albacore
|
|
|
|
opa-psm2
|
|
|
|
opam
|
|
|
|
opari2
|
|
|
|
openbabel
|
|
|
|
openblas
|
openblas: add @0.3.1, patch CMake export bug in @0.3.1:0.3.2 (#9123)
|
2018-09-03 20:49:45 -05:00 |
|
opencoarrays
|
OpenCoarrays: update v2.2.0 (#9215)
|
2018-09-14 16:59:19 -07:00 |
|
opencv
|
add opencv@3.4.3 (#9213)
|
2018-09-14 17:05:05 -07:00 |
|
openexr
|
|
|
|
openfast
|
|
|
|
openfoam-com
|
patch for OF.com@18.06 to correctly find KAHIP (#8982)
|
2018-08-26 19:44:06 -05:00 |
|
openfoam-org
|
install_tree: symlink handling and add 'ignore' option (#9019)
|
2018-08-17 22:08:38 -04:00 |
|
openfst
|
|
|
|
opengl
|
Add libs attribute to mesa and mesa-glu packages (#8904)
|
2018-08-07 10:18:05 +02:00 |
|
openglu
|
Add libs attribute to mesa and mesa-glu packages (#8904)
|
2018-08-07 10:18:05 +02:00 |
|
openjpeg
|
|
|
|
openmc
|
|
|
|
openmpi
|
Java updates: new versions, classpath, and JAVA_HOME (#8613)
|
2018-08-28 14:35:13 -04:00 |
|
opennurbs
|
|
|
|
openpmd-api
|
openPMD-api: ^py-numpy@1.15+ (#9178)
|
2018-09-06 10:41:45 +02:00 |
|
openscenegraph
|
|
|
|
openslide
|
|
|
|
openspeedshop
|
Update openspeedshop and cbtf version numbers (#9150)
|
2018-09-03 20:35:25 -05:00 |
|
openspeedshop-utils
|
Update openspeedshop and cbtf version numbers (#9150)
|
2018-09-03 20:35:25 -05:00 |
|
openssh
|
|
|
|
openssl
|
Build Python 3.7 with external libffi. (#9245)
|
2018-09-14 17:07:13 -07:00 |
|
opium
|
|
|
|
optional-lite
|
Adds a package for optional-lite header-only library (#9117)
|
2018-08-29 18:14:59 +02:00 |
|
opus
|
|
|
|
orfm
|
|
|
|
orthofinder
|
|
|
|
orthomcl
|
|
|
|
osu-micro-benchmarks
|
|
|
|
otf
|
|
|
|
otf2
|
|
|
|
p4est
|
|
|
|
p7zip
|
|
|
|
pacbio-daligner
|
|
|
|
pacbio-damasker
|
|
|
|
pacbio-dazz-db
|
|
|
|
pacbio-dextractor
|
|
|
|
pagit
|
|
|
|
pagmo
|
|
|
|
paml
|
|
|
|
panda
|
|
|
|
pandaseq
|
Replace pkg-config dependencies with virtual (#8783)
|
2018-08-02 13:29:04 -04:00 |
|
pango
|
|
|
|
pangomm
|
|
|
|
papi
|
|
|
|
papyrus
|
|
|
|
paradiseo
|
|
|
|
parallel
|
Download GNU packages from mirrors (#8992)
|
2018-08-15 23:27:21 -07:00 |
|
parallel-netcdf
|
|
|
|
paraver
|
|
|
|
paraview
|
|
|
|
parmetis
|
|
|
|
parmgridgen
|
|
|
|
parquet
|
|
|
|
parsimonator
|
|
|
|
parsplice
|
|
|
|
partitionfinder
|
|
|
|
patch
|
Download GNU packages from mirrors (#8992)
|
2018-08-15 23:27:21 -07:00 |
|
patchelf
|
|
|
|
pathfinder
|
|
|
|
pax-utils
|
|
|
|
pbbam
|
|
|
|
pbmpi
|
|
|
|
pcma
|
|
|
|
pcre
|
|
|
|
pcre2
|
|
|
|
pdf2svg
|
|
|
|
pdftk
|
|
|
|
pdsh
|
|
|
|
pdt
|
|
|
|
pegtl
|
|
|
|
pennant
|
|
|
|
percept
|
|
|
|
perl
|
|
|
|
perl-algorithm-diff
|
|
|
|
perl-app-cmd
|
|
|
|
perl-array-utils
|
|
|
|
perl-b-hooks-endofscope
|
|
|
|
perl-bio-perl
|
|
|
|
perl-bit-vector
|
|
|
|
perl-cairo
|
|
|
|
perl-capture-tiny
|
|
|
|
perl-carp-clan
|
|
|
|
perl-class-data-inheritable
|
|
|
|
perl-class-inspector
|
|
|
|
perl-class-load
|
|
|
|
perl-class-load-xs
|
|
|
|
perl-compress-raw-bzip2
|
|
|
|
perl-compress-raw-zlib
|
|
|
|
perl-contextual-return
|
|
|
|
perl-cpan-meta-check
|
|
|
|
perl-data-optlist
|
|
|
|
perl-data-stag
|
|
|
|
perl-dbd-mysql
|
|
|
|
perl-dbfile
|
|
|
|
perl-dbi
|
|
|
|
perl-devel-cycle
|
|
|
|
perl-devel-globaldestruction
|
|
|
|
perl-devel-overloadinfo
|
|
|
|
perl-devel-stacktrace
|
|
|
|
perl-digest-md5
|
|
|
|
perl-dist-checkconflicts
|
|
|
|
perl-encode-locale
|
|
|
|
perl-eval-closure
|
|
|
|
perl-exception-class
|
|
|
|
perl-exporter-tiny
|
|
|
|
perl-extutils-depends
|
|
|
|
perl-extutils-makemaker
|
|
|
|
perl-extutils-pkgconfig
|
Replace pkg-config dependencies with virtual (#8783)
|
2018-08-02 13:29:04 -04:00 |
|
perl-file-copy-recursive
|
|
|
|
perl-file-listing
|
|
|
|
perl-file-pushd
|
|
|
|
perl-file-sharedir-install
|
|
|
|
perl-file-slurp-tiny
|
|
|
|
perl-file-slurper
|
|
|
|
perl-file-which
|
|
|
|
perl-font-ttf
|
|
|
|
perl-gd
|
|
|
|
perl-gd-graph
|
|
|
|
perl-gd-text
|
|
|
|
perl-gdgraph-histogram
|
perl-gdgraph-histogram: new package (#9250)
|
2018-09-14 15:50:18 -07:00 |
|
perl-graph
|
|
|
|
perl-graph-readwrite
|
|
|
|
perl-html-parser
|
|
|
|
perl-html-tagset
|
|
|
|
perl-http-cookies
|
|
|
|
perl-http-daemon
|
|
|
|
perl-http-date
|
|
|
|
perl-http-message
|
|
|
|
perl-http-negotiate
|
|
|
|
perl-inline
|
|
|
|
perl-inline-c
|
|
|
|
perl-intervaltree
|
|
|
|
perl-io-compress
|
|
|
|
perl-io-html
|
|
|
|
perl-io-sessiondata
|
|
|
|
perl-io-socket-ssl
|
|
|
|
perl-io-string
|
|
|
|
perl-json
|
|
|
|
perl-libwww-perl
|
|
|
|
perl-list-moreutils
|
|
|
|
perl-log-log4perl
|
|
|
|
perl-lwp
|
|
|
|
perl-lwp-mediatypes
|
|
|
|
perl-lwp-protocol-https
|
|
|
|
perl-math-cdf
|
|
|
|
perl-math-cephes
|
|
|
|
perl-math-matrixreal
|
|
|
|
perl-module-build
|
|
|
|
perl-module-implementation
|
|
|
|
perl-module-runtime
|
|
|
|
perl-module-runtime-conflicts
|
|
|
|
perl-moose
|
|
|
|
perl-mozilla-ca
|
|
|
|
perl-mro-compat
|
|
|
|
perl-namespace-clean
|
|
|
|
perl-net-http
|
|
|
|
perl-net-scp-expect
|
|
|
|
perl-net-ssleay
|
|
|
|
perl-package-deprecationmanager
|
|
|
|
perl-package-stash
|
|
|
|
perl-package-stash-xs
|
|
|
|
perl-padwalker
|
|
|
|
perl-parallel-forkmanager
|
|
|
|
perl-params-util
|
|
|
|
perl-parse-recdescent
|
|
|
|
perl-pdf-api2
|
|
|
|
perl-pegex
|
|
|
|
perl-perl6-slurp
|
perl6-slurp: new package (#8672)
|
2018-08-09 10:35:54 -05:00 |
|
perl-perlio-gzip
|
|
|
|
perl-perlio-utf8-strict
|
|
|
|
perl-soap-lite
|
|
|
|
perl-star-fusion
|
perl-star-fusion package: update latest version (#9104)
|
2018-08-28 13:22:18 -04:00 |
|
perl-statistics-descriptive
|
|
|
|
perl-statistics-pca
|
|
|
|
perl-sub-exporter
|
|
|
|
perl-sub-exporter-progressive
|
|
|
|
perl-sub-identify
|
|
|
|
perl-sub-install
|
|
|
|
perl-sub-name
|
|
|
|
perl-sub-uplevel
|
|
|
|
perl-svg
|
|
|
|
perl-swissknife
|
|
|
|
perl-task-weaken
|
|
|
|
perl-term-readkey
|
|
|
|
perl-test-cleannamespaces
|
|
|
|
perl-test-deep
|
|
|
|
perl-test-differences
|
|
|
|
perl-test-exception
|
|
|
|
perl-test-fatal
|
|
|
|
perl-test-memory-cycle
|
|
|
|
perl-test-most
|
|
|
|
perl-test-needs
|
|
|
|
perl-test-requires
|
|
|
|
perl-test-requiresinternet
|
|
|
|
perl-test-warn
|
|
|
|
perl-test-warnings
|
|
|
|
perl-text-csv
|
|
|
|
perl-text-diff
|
|
|
|
perl-text-simpletable
|
|
|
|
perl-text-soundex
|
|
|
|
perl-text-unidecode
|
|
|
|
perl-time-hires
|
|
|
|
perl-time-piece
|
|
|
|
perl-try-tiny
|
|
|
|
perl-uri
|
|
|
|
perl-uri-escape
|
|
|
|
perl-version
|
|
|
|
perl-want
|
|
|
|
perl-www-robotrules
|
|
|
|
perl-xml-libxml
|
|
|
|
perl-xml-parser
|
|
|
|
perl-xml-parser-lite
|
|
|
|
perl-xml-simple
|
|
|
|
perl-yaml-libyaml
|
|
|
|
petsc
|
petsc: fix compilation with intel (#9198)
|
2018-09-12 11:18:41 -07:00 |
|
pexsi
|
install_tree, copy_tree can install into existing directory structures (#8289)
|
2018-08-15 09:30:09 -07:00 |
|
pfft
|
|
|
|
pflotran
|
|
|
|
pfunit
|
|
|
|
pgdspider
|
|
|
|
pgi
|
|
|
|
pgmath
|
Package/flang: Updated to use own version of llvm (#8766)
|
2018-08-03 20:35:09 -04:00 |
|
phantompeakqualtools
|
|
|
|
phast
|
|
|
|
phasta
|
|
|
|
phist
|
Phist 1.6.1 (#8933)
|
2018-08-10 12:53:18 -05:00 |
|
phylip
|
|
|
|
picard
|
install_tree, copy_tree can install into existing directory structures (#8289)
|
2018-08-15 09:30:09 -07:00 |
|
pidx
|
|
|
|
pigz
|
|
|
|
pilon
|
install_tree, copy_tree can install into existing directory structures (#8289)
|
2018-08-15 09:30:09 -07:00 |
|
pindel
|
install_tree, copy_tree can install into existing directory structures (#8289)
|
2018-08-15 09:30:09 -07:00 |
|
piranha
|
|
|
|
pism
|
|
|
|
pixman
|
|
|
|
pkg-config
|
|
|
|
pkgconf
|
|
|
|
planck-likelihood
|
|
|
|
plasma
|
|
|
|
platypus
|
|
|
|
plink
|
|
|
|
plplot
|
|
|
|
plumed
|
plumed: updating plumed to latest version (#9227)
|
2018-09-14 17:13:22 -07:00 |
|
pmgr-collective
|
|
|
|
pmix
|
|
|
|
pnfft
|
|
|
|
pngwriter
|
|
|
|
pnmpi
|
|
|
|
poamsa
|
|
|
|
pocl
|
Update the pocl package (#9090)
|
2018-08-24 12:26:17 -05:00 |
|
polymake
|
|
|
|
poppler
|
|
|
|
poppler-data
|
|
|
|
porta
|
|
|
|
portage
|
|
|
|
portcullis
|
portcullis: new package starting at 1.1.2 (#9218)
|
2018-09-14 15:55:58 -07:00 |
|
postgresql
|
|
|
|
ppl
|
|
|
|
prank
|
|
|
|
precice
|
|
|
|
presentproto
|
|
|
|
preseq
|
|
|
|
price
|
|
|
|
primer3
|
|
|
|
prinseq-lite
|
|
|
|
printproto
|
|
|
|
prng
|
|
|
|
probconsrna
|
|
|
|
prodigal
|
|
|
|
proj
|
|
|
|
protobuf
|
|
|
|
proxymngr
|
|
|
|
pruners-ninja
|
|
|
|
ps-lite
|
|
|
|
psi4
|
|
|
|
pslib
|
|
|
|
psm
|
|
|
|
psmc
|
|
|
|
pstreams
|
|
|
|
pugixml
|
|
|
|
pumi
|
|
|
|
pv
|
|
|
|
pvm
|
|
|
|
pxz
|
|
|
|
py-3to2
|
|
|
|
py-4suite-xml
|
|
|
|
py-abipy
|
|
|
|
py-adios
|
|
|
|
py-affine
|
|
|
|
py-alabaster
|
|
|
|
py-apache-libcloud
|
|
|
|
py-apipkg
|
|
|
|
py-appdirs
|
|
|
|
py-appnope
|
|
|
|
py-apscheduler
|
|
|
|
py-argcomplete
|
|
|
|
py-argparse
|
|
|
|
py-ase
|
|
|
|
py-asn1crypto
|
|
|
|
py-astroid
|
|
|
|
py-astropy
|
|
|
|
py-atomicwrites
|
Update to latest version of pytest and dependencies (#9087)
|
2018-08-25 14:12:46 -05:00 |
|
py-attrs
|
|
|
|
py-autopep8
|
|
|
|
py-avro
|
|
|
|
py-avro-json-serializer
|
|
|
|
py-babel
|
|
|
|
py-backcall
|
|
|
|
py-backports-abc
|
|
|
|
py-backports-functools-lru-cache
|
|
|
|
py-backports-shutil-get-terminal-size
|
|
|
|
py-backports-ssl-match-hostname
|
|
|
|
py-basemap
|
|
|
|
py-bcbio-gff
|
|
|
|
py-beautifulsoup4
|
|
|
|
py-binwalk
|
|
|
|
py-biom-format
|
Package py-biom-format fixes (#8727)
|
2018-08-02 13:51:51 -04:00 |
|
py-biopython
|
|
|
|
py-bitarray
|
|
|
|
py-bitstring
|
|
|
|
py-bleach
|
|
|
|
py-blessings
|
|
|
|
py-bokeh
|
|
|
|
py-boltons
|
|
|
|
py-bottleneck
|
|
|
|
py-breakseq2
|
|
|
|
py-brian
|
|
|
|
py-brian2
|
|
|
|
py-bsddb3
|
|
|
|
py-bx-python
|
|
|
|
py-cartopy
|
|
|
|
py-cclib
|
|
|
|
py-cdat-lite
|
|
|
|
py-cdo
|
|
|
|
py-certifi
|
|
|
|
py-cffi
|
|
|
|
py-chardet
|
|
|
|
py-checkm-genome
|
|
|
|
py-cheetah
|
|
|
|
py-click
|
|
|
|
py-cligj
|
|
|
|
py-cloudpickle
|
|
|
|
py-cnvkit
|
|
|
|
py-cogent
|
Feature/py pycogent New-Version (#9095)
|
2018-09-04 14:34:18 -05:00 |
|
py-colorama
|
|
|
|
py-colormath
|
py-colormath: new version, requires newer networkx (#9237)
|
2018-09-14 10:35:45 -07:00 |
|
py-configparser
|
|
|
|
py-counter
|
|
|
|
py-coverage
|
|
|
|
py-cpuinfo
|
|
|
|
py-crispresso
|
|
|
|
py-crossmap
|
py-crossmap: needs py-setuptools (#8898)
|
2018-08-06 17:43:14 -05:00 |
|
py-cryptography
|
|
|
|
py-csvkit
|
|
|
|
py-current
|
|
|
|
py-cutadapt
|
|
|
|
py-cvxopt
|
|
|
|
py-cycler
|
|
|
|
py-cython
|
|
|
|
py-dask
|
|
|
|
py-dateutil
|
|
|
|
py-dbf
|
|
|
|
py-decorator
|
py-decorator: new version (#9240)
|
2018-09-14 15:51:43 -07:00 |
|
py-deeptools
|
|
|
|
py-dendropy
|
|
|
|
py-dill
|
|
|
|
py-discover
|
|
|
|
py-dlcpar
|
|
|
|
py-docopt
|
|
|
|
py-docutils
|
|
|
|
py-doxypy
|
|
|
|
py-doxypypy
|
|
|
|
py-dryscrape
|
|
|
|
py-dxchange
|
|
|
|
py-dxfile
|
|
|
|
py-easybuild-easyblocks
|
|
|
|
py-easybuild-easyconfigs
|
|
|
|
py-easybuild-framework
|
|
|
|
py-edffile
|
|
|
|
py-editdistance
|
|
|
|
py-elasticsearch
|
|
|
|
py-elephant
|
|
|
|
py-emcee
|
|
|
|
py-entrypoints
|
|
|
|
py-enum34
|
|
|
|
py-epydoc
|
|
|
|
py-espresso
|
py-espresso: apply patch to v4.0.0 only (#9196)
|
2018-09-13 10:00:21 +00:00 |
|
py-espressopp
|
|
|
|
py-et-xmlfile
|
|
|
|
py-eventlet
|
|
|
|
py-execnet
|
|
|
|
py-fastaindex
|
|
|
|
py-fasteners
|
|
|
|
py-faststructure
|
|
|
|
py-filelock
|
py-filelock: new package (#9136)
|
2018-08-31 11:21:55 -07:00 |
|
py-fiscalyear
|
|
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py-flake8
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py-flake8-polyfill
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py-flask
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py-flask-compress
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py-flask-socketio
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py-flexx
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py-fn
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py-fparser
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py-funcsigs
|
Update to latest version of pytest and dependencies (#9087)
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2018-08-25 14:12:46 -05:00 |
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py-functools32
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py-future
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py-futures
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py-gdbgui
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py-genders
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py-genshi
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py-gevent
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py-git2
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py-git-review
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py-gnuplot
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py-goatools
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py-gpaw
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py-greenlet
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py-griddataformats
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py-guidata
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py-guiqwt
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py-h5py
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py-h5py: add version 2.8.0 (#9231)
|
2018-09-14 15:56:44 -07:00 |
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py-html2text
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py-html5lib
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py-htseq
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py-httpbin
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py-hypothesis
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py-idna
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py-igraph
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py-illumina-utils
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py-imageio
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py-imagesize
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py-iminuit
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py-importlib
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py-ipaddress
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py-ipdb
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py-ipykernel
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py-ipython
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py-ipython-genutils
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py-ipywidgets
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py-isort
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py-itsdangerous
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py-jdcal
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py-jedi
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py-jinja2
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py-joblib
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py-jpype
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py-jsonschema
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py-junit-xml
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py-jupyter-client
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py-jupyter-console
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py-jupyter-core
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py-jupyter-notebook
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py-keras
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py-kiwisolver
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py-lark-parser
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py-latexcodec
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py-lazy
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py-lazy-object-proxy
|
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py-lazy-property
|
Adding lazy property python module (#47) (#8867)
|
2018-08-02 11:44:16 -05:00 |
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py-lazyarray
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py-libconf
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py-libensemble
|
Update py-libensemble package to v0.3.0 (#9210)
|
2018-09-14 17:15:31 -07:00 |
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py-line-profiler
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py-linecache2
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py-lit
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py-llvmlite
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py-lmfit
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py-localcider
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py-locket
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py-lockfile
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py-logilab-common
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py-lrudict
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py-lxml
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py-lzstring
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py-macholib
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py-machotools
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|
py-macs2
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py-maestrowf
|
py-maestrowf: Addition of new releases. (#9135)
|
2018-09-04 14:33:55 -05:00 |
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py-mako
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py-mappy
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py-markdown
|
py-markdown: fix url and hashes (#9235)
|
2018-09-14 15:51:20 -07:00 |
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py-markupsafe
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py-matplotlib
|
py-matplotlib: incorporate 8532 w/ version range (#9151)
|
2018-09-03 20:34:41 -05:00 |
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py-mccabe
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py-mdanalysis
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py-meep
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py-memory-profiler
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py-methylcode
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py-mg-rast-tools
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py-misopy
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py-mistune
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py-mock
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py-moltemplate
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py-mongo
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py-monotonic
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py-monty
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py-more-itertools
|
Update to latest version of pytest and dependencies (#9087)
|
2018-08-25 14:12:46 -05:00 |
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py-mpi4py
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py-mpmath
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py-multiprocess
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py-multiqc
|
py-multiqc: needs newer py-spectra (#9226)
|
2018-09-14 15:52:29 -07:00 |
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py-mx
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py-mxnet
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py-myhdl
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py-mysqldb1
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py-natsort
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py-nbconvert
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py-nbformat
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py-neo
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py-nestle
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py-netcdf4
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py-netifaces
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py-networkx
|
py-networkx: new version (#9241)
|
2018-09-14 15:52:02 -07:00 |
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py-nose
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py-nosexcover
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py-numba
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py-numexpr
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py-numexpr3
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py-numpy
|
Update to latest version of pytest and dependencies (#9087)
|
2018-08-25 14:12:46 -05:00 |
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py-numpydoc
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py-olefile
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py-ont-fast5-api
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py-openpmd-validator
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py-openpyxl
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py-openslide-python
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py-opentuner
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py-ordereddict
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py-oset
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py-owslib
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py-packaging
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py-palettable
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py-pandas
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py-paramiko
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py-partd
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py-pathlib2
|
Update to latest version of pytest and dependencies (#9087)
|
2018-08-25 14:12:46 -05:00 |
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py-pathos
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py-pathspec
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py-patsy
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py-pbr
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py-pep8-naming
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py-perf
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py-performance
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py-periodictable
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py-petsc4py
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py-pexpect
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py-phonopy
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py-pickleshare
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py-picrust
|
Feature/py picrust (#9184)
|
2018-09-14 17:24:17 -07:00 |
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py-pil
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py-pillow
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py-pip
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py-pipits
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py-pkgconfig
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py-plotly
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py-pluggy
|
Update to latest version of pytest and dependencies (#9087)
|
2018-08-25 14:12:46 -05:00 |
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py-ply
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py-pmw
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py-poster
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py-pox
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py-ppft
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py-prettytable
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py-proj
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py-projectq
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py-prompt-toolkit
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py-protobuf
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py-psutil
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py-psyclone
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py-ptyprocess
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py-pudb
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py-py
|
Update to latest version of pytest and dependencies (#9087)
|
2018-08-25 14:12:46 -05:00 |
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py-py2bit
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py-py2cairo
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py-py2neo
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py-py4j
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py-pyani
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py-pyasn1
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py-pybedtools
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py-pybigwig
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py-pybind11
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py-pybtex
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py-pybtex-docutils
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py-pychecker
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py-pycodestyle
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py-pycparser
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py-pycrypto
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py-pycurl
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py-pydatalog
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py-pydispatcher
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py-pydot
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py-pyelftools
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py-pyepsg
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py-pyfaidx
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py-pyfasta
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py-pyfftw
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py-pyflakes
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py-pygdbmi
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py-pygments
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py-pygobject
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py-pygpu
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py-pygtk
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py-pylint
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py-pymatgen
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py-pyminifier
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py-pymol
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py-pympler
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py-pymysql
|
py-pymysql: new package (#9122)
|
2018-09-03 20:50:39 -05:00 |
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py-pynn
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py-pypar
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py-pyparsing
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py-pypeflow
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py-pyprof2html
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py-pyqi
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py-pyqt
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py-pyrad
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py-pysam
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py-pyscaf
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py-pyserial
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py-pyshp
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py-pyside
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py-pysocks
|
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py-pysqlite
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py-pytables
|
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py-pytest
|
Update to latest version of pytest and dependencies (#9087)
|
2018-08-25 14:12:46 -05:00 |
|
py-pytest-cov
|
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py-pytest-flake8
|
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py-pytest-httpbin
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py-pytest-mock
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py-pytest-runner
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py-pytest-xdist
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py-python-daemon
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py-python-engineio
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py-python-gitlab
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py-python-levenshtein
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py-python-socketio
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py-pythonqwt
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py-pytorch
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py-pytz
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py-pyutilib
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py-pyvcf
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py-pywavelets
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py-pyyaml
|
added version for kull support (#9141)
|
2018-09-03 20:36:15 -05:00 |
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py-qtawesome
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py-qtconsole
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py-qtpy
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py-quantities
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py-quast
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py-radical-utils
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py-ranger
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py-rasterio
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py-readme-renderer
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py-regex
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py-reportlab
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py-requests
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py-requests-toolbelt
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py-restview
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py-rope
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py-rpy2
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py-rsa
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py-rseqc
|
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py-rtree
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|
py-saga-python
|
|
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|
py-scandir
|
Update to latest version of pytest and dependencies (#9087)
|
2018-08-25 14:12:46 -05:00 |
|
py-scientificpython
|
|
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|
py-scikit-image
|
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|
py-scikit-learn
|
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|
py-scipy
|
Update to latest version of pytest and dependencies (#9087)
|
2018-08-25 14:12:46 -05:00 |
|
py-seaborn
|
|
|
|
py-setuptools
|
Update to latest version of pytest and dependencies (#9087)
|
2018-08-25 14:12:46 -05:00 |
|
py-setuptools-git
|
|
|
|
py-setuptools-scm
|
Update to latest version of pytest and dependencies (#9087)
|
2018-08-25 14:12:46 -05:00 |
|
py-sfepy
|
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py-sh
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py-shapely
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py-shiboken
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py-simplegeneric
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py-simplejson
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py-singledispatch
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py-sip
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py-six
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py-slepc4py
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py-slurm-pipeline
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py-sncosmo
|
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py-snowballstemmer
|
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py-snuggs
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py-spectra
|
py-spectra: new version (#9224)
|
2018-09-14 16:59:50 -07:00 |
|
py-spefile
|
|
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|
py-spglib
|
|
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py-sphinx
|
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py-sphinx-bootstrap-theme
|
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py-sphinx-rtd-theme
|
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py-sphinxcontrib-bibtex
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py-sphinxcontrib-programoutput
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py-sphinxcontrib-websupport
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py-spyder
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py-spykeutils
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py-sqlalchemy
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py-statsmodels
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py-stevedore
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py-storm
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py-subprocess32
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py-symengine
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py-symfit
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py-sympy
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py-tabulate
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py-tappy
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py-terminado
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py-testinfra
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py-tetoolkit
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py-theano
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py-tifffile
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py-toml
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py-tomopy
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py-toolz
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py-tornado
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py-tqdm
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py-traceback2
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py-traitlets
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py-tuiview
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py-twisted
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py-typing
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py-tzlocal
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py-udunits
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py-umi-tools
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py-unittest2
|
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py-unittest2py3k
|
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py-urllib3
|
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py-urwid
|
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py-vcversioner
|
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py-virtualenv
|
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py-virtualenv-clone
|
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py-virtualenvwrapper
|
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py-vmd-python
|
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py-vsc-base
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py-vsc-install
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py-wcsaxes
|
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py-wcwidth
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py-webkit-server
|
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py-weblogo
|
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py-werkzeug
|
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py-wheel
|
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py-widgetsnbextension
|
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py-wrapt
|
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py-xarray
|
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py-xattr
|
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py-xlrd
|
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py-xlsxwriter
|
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py-xmlrunner
|
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py-xopen
|
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py-xpyb
|
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py-xvfbwrapper
|
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py-yamlreader
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py-yapf
|
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py-yt
|
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py-zmq
|
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py-zope-event
|
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py-zope-interface
|
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|
python
|
Build Python 3.7 with external libffi. (#9245)
|
2018-09-14 17:07:13 -07:00 |
|
qbank
|
|
|
|
qbox
|
install_tree, copy_tree can install into existing directory structures (#8289)
|
2018-08-15 09:30:09 -07:00 |
|
qhull
|
|
|
|
qmcpack
|
QMCPACK Spack Package Update (Summer 2018) (#9008)
|
2018-08-18 11:26:17 -05:00 |
|
qmd-progress
|
|
|
|
qorts
|
install_tree, copy_tree can install into existing directory structures (#8289)
|
2018-08-15 09:30:09 -07:00 |
|
qrupdate
|
|
|
|
qt
|
|
|
|
qt-creator
|
|
|
|
qtgraph
|
qtgraph and cbtf-argonavis create proper library paths in modules (#8797)
|
2018-08-17 15:58:08 -07:00 |
|
qthreads
|
|
|
|
quantum-espresso
|
|
|
|
quinoa
|
Charmpp: rename charm to charmpp according to ++ conventions (#9216)
|
2018-09-14 17:01:07 -07:00 |
|
qwt
|
|
|
|
r
|
install_tree, copy_tree can install into existing directory structures (#8289)
|
2018-08-15 09:30:09 -07:00 |
|
r-a4
|
|
|
|
r-a4base
|
|
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|
r-a4classif
|
|
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|
r-a4core
|
|
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|
r-a4preproc
|
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r-a4reporting
|
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r-abadata
|
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r-abaenrichment
|
|
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|
r-abind
|
|
|
|
r-absseq
|
|
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|
r-acde
|
|
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|
r-acepack
|
|
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|
r-acgh
|
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|
r-acme
|
|
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|
r-ada
|
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|
r-adabag
|
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|
r-ade4
|
|
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|
r-adegenet
|
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|
r-adsplit
|
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|
r-aer
|
|
|
|
r-affxparser
|
|
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|
r-affy
|
|
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|
r-affycomp
|
|
|
|
r-affycompatible
|
|
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|
r-affycontam
|
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|
r-affycoretools
|
|
|
|
r-affydata
|
|
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|
r-affyexpress
|
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|
r-affyilm
|
|
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|
r-affyio
|
|
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|
r-affypdnn
|
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|
r-affyplm
|
|
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|
r-affyqcreport
|
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r-affyrnadegradation
|
|
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|
r-agdex
|
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|
r-agilp
|
|
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r-agimicrorna
|
|
|
|
r-aims
|
|
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|
r-aldex2
|
|
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r-allelicimbalance
|
|
|
|
r-alpine
|
|
|
|
r-als
|
|
|
|
r-alsace
|
|
|
|
r-altcdfenvs
|
|
|
|
r-amap
|
r-amap: new package (#8935)
|
2018-08-10 15:21:22 -05:00 |
|
r-ampliqueso
|
|
|
|
r-analysispageserver
|
|
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|
r-anaquin
|
|
|
|
r-aneufinder
|
|
|
|
r-aneufinderdata
|
|
|
|
r-annaffy
|
|
|
|
r-annotate
|
r-annotate: new version (#9061)
|
2018-08-22 09:45:11 -05:00 |
|
r-annotationdbi
|
r-annotationdbi : new version (#9040)
|
2018-08-21 14:15:17 -05:00 |
|
r-annotationfilter
|
|
|
|
r-annotationforge
|
|
|
|
r-annotationhub
|
|
|
|
r-ape
|
|
|
|
r-argparse
|
r-argparse: new package (#8944)
|
2018-08-13 22:21:30 -05:00 |
|
r-assertthat
|
|
|
|
r-backports
|
|
|
|
r-bamsignals
|
|
|
|
r-base64
|
|
|
|
r-base64enc
|
|
|
|
r-bbmisc
|
|
|
|
r-beanplot
|
|
|
|
r-bh
|
|
|
|
r-biasedurn
|
r-biasedurn: new package (#8937)
|
2018-08-10 16:08:31 -05:00 |
|
r-bindr
|
|
|
|
r-bindrcpp
|
r-bindrcpp: add new version (#8950)
|
2018-08-11 09:21:05 -05:00 |
|
r-biobase
|
r-biobase: new version (#9038)
|
2018-08-21 14:15:42 -05:00 |
|
r-biocgenerics
|
r-biocgenerics: new version (#9039)
|
2018-08-21 14:15:30 -05:00 |
|
r-biocinstaller
|
|
|
|
r-biocparallel
|
r-biocparallel: new version (#9046)
|
2018-08-21 14:13:27 -05:00 |
|
r-biocstyle
|
|
|
|
r-biom-utils
|
|
|
|
r-biomart
|
r-biomart: new version; (#9058)
|
2018-09-03 21:03:47 -05:00 |
|
r-biomformat
|
|
|
|
r-biostrings
|
r-biostrings: new version (#9048)
|
2018-08-22 12:21:43 +02:00 |
|
r-biovizbase
|
|
|
|
r-bit
|
|
|
|
r-bit64
|
|
|
|
r-bitops
|
|
|
|
r-blob
|
|
|
|
r-bookdown
|
|
|
|
r-boot
|
|
|
|
r-brew
|
|
|
|
r-broom
|
|
|
|
r-bsgenome
|
|
|
|
r-bumphunter
|
|
|
|
r-c50
|
|
|
|
r-callr
|
|
|
|
r-car
|
|
|
|
r-caret
|
|
|
|
r-category
|
|
|
|
r-catools
|
|
|
|
r-cdcfluview
|
|
|
|
r-cellranger
|
|
|
|
r-cghflasso
|
|
|
|
r-checkmate
|
|
|
|
r-checkpoint
|
|
|
|
r-chemometrics
|
Tanim (#9158)
|
2018-09-07 16:00:52 -05:00 |
|
r-chron
|
|
|
|
r-circlize
|
|
|
|
r-class
|
|
|
|
r-classint
|
|
|
|
r-cli
|
|
|
|
r-clipr
|
|
|
|
r-cluster
|
|
|
|
r-clusterprofiler
|
|
|
|
r-cner
|
|
|
|
r-coda
|
|
|
|
r-codetools
|
|
|
|
r-coin
|
|
|
|
r-colorspace
|
|
|
|
r-complexheatmap
|
|
|
|
r-corpcor
|
|
|
|
r-corrplot
|
|
|
|
r-covr
|
|
|
|
r-cowplot
|
|
|
|
r-crayon
|
|
|
|
r-crosstalk
|
|
|
|
r-ctc
|
r-ctc: new package (#8936)
|
2018-08-12 19:46:14 -05:00 |
|
r-cubature
|
|
|
|
r-cubist
|
|
|
|
r-curl
|
|
|
|
r-data-table
|
|
|
|
r-dbi
|
|
|
|
r-dbplyr
|
|
|
|
r-delayedarray
|
r-delayedarray: new version (#9053)
|
2018-08-22 09:39:52 -05:00 |
|
r-deldir
|
|
|
|
r-dendextend
|
|
|
|
r-deoptim
|
|
|
|
r-deoptimr
|
|
|
|
r-deseq
|
|
|
|
r-deseq2
|
r-deseq2: new version (#9062)
|
2018-09-03 21:03:08 -05:00 |
|
r-desolve
|
|
|
|
r-devtools
|
|
|
|
r-diagrammer
|
|
|
|
r-dicekriging
|
|
|
|
r-dichromat
|
|
|
|
r-diffusionmap
|
|
|
|
r-digest
|
|
|
|
r-diptest
|
|
|
|
r-dirichletmultinomial
|
|
|
|
r-dismo
|
|
|
|
r-dnacopy
|
|
|
|
r-do-db
|
|
|
|
r-domc
|
|
|
|
r-doparallel
|
|
|
|
r-dorng
|
|
|
|
r-dose
|
|
|
|
r-downloader
|
|
|
|
r-dplyr
|
|
|
|
r-dt
|
|
|
|
r-dtw
|
|
|
|
r-dygraphs
|
|
|
|
r-e1071
|
|
|
|
r-edger
|
r-edger: new version (#8951)
|
2018-08-13 22:18:34 -05:00 |
|
r-ellipse
|
|
|
|
r-ensembldb
|
|
|
|
r-ergm
|
|
|
|
r-evaluate
|
|
|
|
r-expm
|
|
|
|
r-factoextra
|
|
|
|
r-factominer
|
|
|
|
r-fastcluster
|
r-fastcluster: new package (#8934)
|
2018-08-10 15:01:12 -05:00 |
|
r-fastmatch
|
|
|
|
r-ff
|
|
|
|
r-fftwtools
|
|
|
|
r-fgsea
|
|
|
|
r-filehash
|
|
|
|
r-findpython
|
r-findpython: new package (#8943)
|
2018-08-11 09:23:34 -05:00 |
|
r-fit-models
|
|
|
|
r-flashclust
|
|
|
|
r-flexclust
|
|
|
|
r-flexmix
|
|
|
|
r-fnn
|
Tanim (#9158)
|
2018-09-07 16:00:52 -05:00 |
|
r-forcats
|
|
|
|
r-foreach
|
|
|
|
r-forecast
|
|
|
|
r-foreign
|
|
|
|
r-formatr
|
|
|
|
r-formula
|
|
|
|
r-fpc
|
|
|
|
r-fracdiff
|
|
|
|
r-futile-logger
|
|
|
|
r-futile-options
|
|
|
|
r-gbm
|
|
|
|
r-gcrma
|
|
|
|
r-gdata
|
|
|
|
r-gdsfmt
|
|
|
|
r-geiger
|
|
|
|
r-genefilter
|
r-genefilter: new version (#9063)
|
2018-08-22 09:45:56 -05:00 |
|
r-genelendatabase
|
r-genelendatabase: new package (#8938)
|
2018-08-13 22:21:03 -05:00 |
|
r-geneplotter
|
r-geneplotter: new version (#9060)
|
2018-08-22 09:44:48 -05:00 |
|
r-genie3
|
|
|
|
r-genomeinfodb
|
r-genomeinfodb: new version (#9051)
|
2018-08-22 09:38:28 -05:00 |
|
r-genomeinfodbdata
|
r-genomeinfodbdata: new version (#9050)
|
2018-08-22 09:37:56 -05:00 |
|
r-genomicalignments
|
r-genomicalignments: new version (#9055)
|
2018-09-03 21:04:22 -05:00 |
|
r-genomicfeatures
|
r-genomicfeatures: new version (#9057)
|
2018-08-22 09:41:38 -05:00 |
|
r-genomicranges
|
r-genomicranges: new version (#9052)
|
2018-08-22 09:39:23 -05:00 |
|
r-geomorph
|
|
|
|
r-geoquery
|
|
|
|
r-geosphere
|
|
|
|
r-getopt
|
|
|
|
r-getoptlong
|
|
|
|
r-ggally
|
|
|
|
r-ggbio
|
|
|
|
r-ggdendro
|
|
|
|
r-ggjoy
|
|
|
|
r-ggmap
|
|
|
|
r-ggplot2
|
|
|
|
r-ggpubr
|
|
|
|
r-ggrepel
|
|
|
|
r-ggridges
|
|
|
|
r-ggsci
|
|
|
|
r-ggvis
|
|
|
|
r-gistr
|
|
|
|
r-git2r
|
|
|
|
r-glimma
|
r-glimma: new package (#8940)
|
2018-08-13 22:20:41 -05:00 |
|
r-glmnet
|
|
|
|
r-globaloptions
|
|
|
|
r-glue
|
|
|
|
r-gmodels
|
|
|
|
r-gmp
|
|
|
|
r-go-db
|
|
|
|
r-googlevis
|
|
|
|
r-goplot
|
r-goplot: new package (#8942)
|
2018-08-11 09:26:16 -05:00 |
|
r-gosemsim
|
|
|
|
r-goseq
|
r-goseq: new package (#8939)
|
2018-08-26 19:45:23 -05:00 |
|
r-gostats
|
|
|
|
r-gplots
|
|
|
|
r-graph
|
|
|
|
r-gridbase
|
|
|
|
r-gridextra
|
|
|
|
r-gseabase
|
|
|
|
r-gss
|
|
|
|
r-gsubfn
|
|
|
|
r-gtable
|
|
|
|
r-gtools
|
|
|
|
r-gtrellis
|
|
|
|
r-gviz
|
|
|
|
r-haven
|
|
|
|
r-hexbin
|
|
|
|
r-highr
|
|
|
|
r-hmisc
|
|
|
|
r-hms
|
|
|
|
r-htmltable
|
|
|
|
r-htmltools
|
|
|
|
r-htmlwidgets
|
|
|
|
r-httpuv
|
|
|
|
r-httr
|
|
|
|
r-hwriter
|
|
|
|
r-hypergraph
|
|
|
|
r-ica
|
|
|
|
r-igraph
|
|
|
|
r-illuminaio
|
|
|
|
r-impute
|
|
|
|
r-influencer
|
|
|
|
r-inline
|
|
|
|
r-interactivedisplaybase
|
|
|
|
r-ipred
|
|
|
|
r-iranges
|
r-iranges: new version (#9041)
|
2018-08-21 15:02:52 -05:00 |
|
r-irdisplay
|
|
|
|
r-irkernel
|
|
|
|
r-irlba
|
|
|
|
r-iso
|
|
|
|
r-iterators
|
|
|
|
r-janitor
|
|
|
|
r-jaspar2018
|
|
|
|
r-jomo
|
|
|
|
r-jpeg
|
|
|
|
r-jsonlite
|
|
|
|
r-kegg-db
|
|
|
|
r-kegggraph
|
|
|
|
r-keggrest
|
|
|
|
r-kernlab
|
|
|
|
r-kernsmooth
|
|
|
|
r-kknn
|
|
|
|
r-knitr
|
|
|
|
r-ks
|
Tanim (#9158)
|
2018-09-07 16:00:52 -05:00 |
|
r-labeling
|
|
|
|
r-lambda-r
|
|
|
|
r-laplacesdemon
|
|
|
|
r-lars
|
Tanim (#9158)
|
2018-09-07 16:00:52 -05:00 |
|
r-lattice
|
|
|
|
r-latticeextra
|
|
|
|
r-lava
|
|
|
|
r-lazyeval
|
|
|
|
r-leaflet
|
|
|
|
r-leaps
|
|
|
|
r-learnbayes
|
|
|
|
r-lhs
|
|
|
|
r-limma
|
r-limma: new version (#8952)
|
2018-08-13 22:18:12 -05:00 |
|
r-lme4
|
|
|
|
r-lmtest
|
|
|
|
r-locfit
|
|
|
|
r-log4r
|
|
|
|
r-lpsolve
|
|
|
|
r-lsei
|
|
|
|
r-lubridate
|
|
|
|
r-magic
|
|
|
|
r-magrittr
|
|
|
|
r-makecdfenv
|
|
|
|
r-maldiquant
|
|
|
|
r-mapproj
|
|
|
|
r-maps
|
|
|
|
r-maptools
|
|
|
|
r-markdown
|
|
|
|
r-mass
|
|
|
|
r-matr
|
|
|
|
r-matrix
|
|
|
|
r-matrixmodels
|
|
|
|
r-matrixstats
|
|
|
|
r-mclust
|
|
|
|
r-mcmcglmm
|
|
|
|
r-mco
|
|
|
|
r-mda
|
|
|
|
r-memoise
|
|
|
|
r-mergemaid
|
|
|
|
r-methodss3
|
|
|
|
r-mgcv
|
|
|
|
r-mgraster
|
|
|
|
r-mice
|
|
|
|
r-mime
|
|
|
|
r-minfi
|
|
|
|
r-minqa
|
|
|
|
r-misc3d
|
|
|
|
r-mitml
|
|
|
|
r-mixtools
|
|
|
|
r-mlbench
|
|
|
|
r-mlinterfaces
|
|
|
|
r-mlr
|
|
|
|
r-mlrmbo
|
|
|
|
r-mmwrweek
|
|
|
|
r-mnormt
|
|
|
|
r-modelmetrics
|
|
|
|
r-modelr
|
|
|
|
r-modeltools
|
|
|
|
r-mpm
|
|
|
|
r-msnbase
|
|
|
|
r-multcomp
|
|
|
|
r-multicool
|
Tanim (#9158)
|
2018-09-07 16:00:52 -05:00 |
|
r-multtest
|
|
|
|
r-munsell
|
|
|
|
r-mvtnorm
|
|
|
|
r-mzid
|
|
|
|
r-mzr
|
|
|
|
r-nanotime
|
|
|
|
r-ncbit
|
|
|
|
r-ncdf4
|
|
|
|
r-network
|
|
|
|
r-networkd3
|
|
|
|
r-nlme
|
|
|
|
r-nloptr
|
r-nloptr: Explicit depends_on(nlopt). Previously there was a hidden d… (#9176)
|
2018-09-14 08:11:16 -05:00 |
|
r-nmf
|
|
|
|
r-nnet
|
|
|
|
r-nnls
|
|
|
|
r-nor1mix
|
|
|
|
r-np
|
|
|
|
r-numderiv
|
|
|
|
r-oligoclasses
|
|
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|
r-oo
|
|
|
|
r-openssl
|
|
|
|
r-org-hs-eg-db
|
|
|
|
r-organismdbi
|
|
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|
r-packrat
|
|
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|
r-pacman
|
|
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|
r-pamr
|
|
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|
r-pan
|
|
|
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r-parallelmap
|
|
|
|
r-paramhelpers
|
|
|
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r-party
|
|
|
|
r-partykit
|
|
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|
r-pathview
|
|
|
|
r-pbapply
|
|
|
|
r-pbdzmq
|
|
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|
r-pbkrtest
|
|
|
|
r-pcamethods
|
|
|
|
r-pcapp
|
Tanim (#9158)
|
2018-09-07 16:00:52 -05:00 |
|
r-permute
|
|
|
|
r-pfam-db
|
|
|
|
r-phangorn
|
|
|
|
r-phantompeakqualtools
|
|
|
|
r-phyloseq
|
|
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|
r-picante
|
|
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|
r-pkgconfig
|
|
|
|
r-pkgmaker
|
|
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r-plogr
|
|
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r-plot3d
|
|
|
|
r-plotly
|
|
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|
r-plotrix
|
|
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r-pls
|
|
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|
r-plyr
|
|
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r-pmcmr
|
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r-png
|
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r-powerlaw
|
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r-prabclus
|
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r-praise
|
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r-preprocesscore
|
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r-prettyunits
|
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r-proc
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r-prodlim
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r-progress
|
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r-protgenerics
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r-proto
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r-proxy
|
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r-pryr
|
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r-psych
|
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r-ptw
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r-purrr
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r-quadprog
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r-quantmod
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r-quantreg
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r-quantro
|
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r-qvalue
|
r-qvalue: new version (#9059)
|
2018-08-22 09:44:21 -05:00 |
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r-r6
|
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r-randomforest
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r-ranger
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r-rappdirs
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r-raster
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r-rbgl
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r-rbokeh
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r-rcolorbrewer
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r-rcpp
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r-rcpparmadillo
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r-rcppblaze
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r-rcppcctz
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r-rcppcnpy
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r-rcppeigen
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r-rcppprogress
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r-rcurl
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r-rda
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r-readr
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r-readxl
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r-registry
|
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r-rematch
|
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r-reordercluster
|
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r-reportingtools
|
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r-repr
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r-reprex
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r-reshape
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r-reshape2
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r-rex
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r-rgdal
|
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r-rgenoud
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r-rgeos
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r-rgl
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r-rgooglemaps
|
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r-rgraphviz
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r-rhdf5
|
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r-rhtslib
|
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r-rinside
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r-rjags
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r-rjava
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r-rjson
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r-rjsonio
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r-rlang
|
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r-rmarkdown
|
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r-rminer
|
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r-rmpfr
|
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r-rmpi
|
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r-rmysql
|
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r-rngtools
|
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r-robustbase
|
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r-rocr
|
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r-rodbc
|
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r-rots
|
r-rots: new package (#8941)
|
2018-08-14 07:14:06 -05:00 |
|
r-roxygen2
|
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r-rpart
|
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r-rpart-plot
|
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r-rpostgresql
|
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r-rprojroot
|
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r-rsamtools
|
r-rsamtools: new version (#9049)
|
2018-08-22 09:37:03 -05:00 |
|
r-rsnns
|
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r-rsolnp
|
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r-rsqlite
|
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r-rstan
|
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r-rstudioapi
|
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r-rtracklayer
|
r-rtracklayer: new version (#9056)
|
2018-08-22 09:43:25 -05:00 |
|
r-rtsne
|
|
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r-rvcheck
|
|
|
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r-rvest
|
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|
r-rzmq
|
|
|
|
r-s4vectors
|
r-s4vectors: new version (#9043)
|
2018-08-21 14:14:05 -05:00 |
|
r-samr
|
|
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|
r-sandwich
|
|
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r-scales
|
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r-scatterplot3d
|
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r-sdmtools
|
|
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r-segmented
|
|
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r-selectr
|
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r-seqinr
|
|
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r-seqlogo
|
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r-seurat
|
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r-sf
|
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r-sfsmisc
|
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r-shape
|
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r-shiny
|
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|
r-shinydashboard
|
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|
|
r-shortread
|
|
|
|
r-siggenes
|
|
|
|
r-simpleaffy
|
|
|
|
r-sm
|
r-sm: new package (#8945)
|
2018-08-11 09:22:21 -05:00 |
|
r-smoof
|
|
|
|
r-sn
|
|
|
|
r-snow
|
|
|
|
r-snowfall
|
|
|
|
r-snprelate
|
|
|
|
r-som
|
Tanim (#9158)
|
2018-09-07 16:00:52 -05:00 |
|
r-somaticsignatures
|
|
|
|
r-sourcetools
|
|
|
|
r-sp
|
|
|
|
r-sparsem
|
|
|
|
r-spatial
|
|
|
|
r-spdep
|
|
|
|
r-speedglm
|
|
|
|
r-spem
|
|
|
|
r-splitstackshape
|
|
|
|
r-sqldf
|
|
|
|
r-squash
|
|
|
|
r-stanheaders
|
|
|
|
r-statmod
|
|
|
|
r-statnet-common
|
|
|
|
r-stringi
|
|
|
|
r-stringr
|
|
|
|
r-strucchange
|
|
|
|
r-subplex
|
|
|
|
r-summarizedexperiment
|
r-summarizedexperiment: new version (#9054)
|
2018-09-04 14:34:45 -05:00 |
|
r-survey
|
|
|
|
r-survival
|
|
|
|
r-sva
|
|
|
|
r-tarifx
|
|
|
|
r-tclust
|
|
|
|
r-tensora
|
|
|
|
r-testit
|
|
|
|
r-testthat
|
|
|
|
r-tfbstools
|
|
|
|
r-tfmpvalue
|
|
|
|
r-th-data
|
|
|
|
r-threejs
|
|
|
|
r-tibble
|
|
|
|
r-tidycensus
|
|
|
|
r-tidyr
|
|
|
|
r-tidyselect
|
|
|
|
r-tidyverse
|
|
|
|
r-tiff
|
|
|
|
r-tigris
|
|
|
|
r-timedate
|
|
|
|
r-tmixclust
|
|
|
|
r-topgo
|
|
|
|
r-trimcluster
|
|
|
|
r-truncnorm
|
|
|
|
r-trust
|
|
|
|
r-tseries
|
|
|
|
r-tsne
|
|
|
|
r-ttr
|
|
|
|
r-udunits2
|
|
|
|
r-units
|
|
|
|
r-utf8
|
|
|
|
r-utils
|
|
|
|
r-uuid
|
|
|
|
r-variantannotation
|
|
|
|
r-varselrf
|
|
|
|
r-vcd
|
|
|
|
r-vegan
|
|
|
|
r-vgam
|
|
|
|
r-vipor
|
|
|
|
r-viridis
|
|
|
|
r-viridislite
|
|
|
|
r-visnetwork
|
|
|
|
r-vsn
|
|
|
|
r-whisker
|
|
|
|
r-withr
|
|
|
|
r-xde
|
|
|
|
r-xgboost
|
|
|
|
r-xlconnect
|
|
|
|
r-xlconnectjars
|
|
|
|
r-xlsx
|
|
|
|
r-xlsxjars
|
|
|
|
r-xmapbridge
|
|
|
|
r-xml
|
|
|
|
r-xml2
|
|
|
|
r-xtable
|
|
|
|
r-xts
|
|
|
|
r-xvector
|
r-xvector: new version (#9045)
|
2018-08-21 14:13:39 -05:00 |
|
r-yaml
|
|
|
|
r-yapsa
|
|
|
|
r-yaqcaffy
|
|
|
|
r-yarn
|
|
|
|
r-zlibbioc
|
r-zlibbioc: new version (#9044)
|
2018-08-21 14:13:52 -05:00 |
|
r-zoo
|
|
|
|
racon
|
|
|
|
raft
|
|
|
|
ragel
|
|
|
|
raja
|
|
|
|
randfold
|
|
|
|
random123
|
|
|
|
randrproto
|
|
|
|
range-v3
|
range-v3 package (#9093)
|
2018-08-24 09:41:25 -05:00 |
|
rankstr
|
ECP VELOC Package update (#8910)
|
2018-08-08 21:40:38 -04:00 |
|
rapidjson
|
|
|
|
ravel
|
|
|
|
raxml
|
|
|
|
ray
|
|
|
|
rdma-core
|
rdma-core: Fix missing pkg-config dependency (#9195)
|
2018-09-14 17:21:05 -07:00 |
|
rdp-classifier
|
|
|
|
re2c
|
|
|
|
readfq
|
|
|
|
readline
|
Download GNU packages from mirrors (#8992)
|
2018-08-15 23:27:21 -07:00 |
|
recordproto
|
|
|
|
redset
|
ECP VELOC Package update (#8910)
|
2018-08-08 21:40:38 -04:00 |
|
redundans
|
|
|
|
relion
|
added relion version 3 (beta) (#8872)
|
2018-08-16 10:51:58 -05:00 |
|
rempi
|
|
|
|
rename
|
|
|
|
rendercheck
|
|
|
|
renderproto
|
|
|
|
repeatmasker
|
install_tree, copy_tree can install into existing directory structures (#8289)
|
2018-08-15 09:30:09 -07:00 |
|
resourceproto
|
|
|
|
revbayes
|
|
|
|
rgb
|
|
|
|
rhash
|
|
|
|
rlwrap
|
|
|
|
rmats
|
rmats: new package starting at 4.0.2 (#9243)
|
2018-09-14 14:54:26 -07:00 |
|
rmlab
|
|
|
|
rna-seqc
|
install_tree, copy_tree can install into existing directory structures (#8289)
|
2018-08-15 09:30:09 -07:00 |
|
rngstreams
|
|
|
|
rockstar
|
install_tree, copy_tree can install into existing directory structures (#8289)
|
2018-08-15 09:30:09 -07:00 |
|
root
|
|
|
|
rose
|
|
|
|
ross
|
ROSS package: fix build error and add v7.0.0 (#9128)
|
2018-08-29 13:13:50 -04:00 |
|
rr
|
|
|
|
rsbench
|
|
|
|
rsem
|
|
|
|
rstart
|
|
|
|
rsync
|
|
|
|
rtags
|
|
|
|
rtax
|
|
|
|
ruby
|
|
|
|
ruby-gnuplot
|
|
|
|
ruby-narray
|
|
|
|
ruby-ronn
|
|
|
|
ruby-rubyinline
|
|
|
|
ruby-svn2git
|
|
|
|
ruby-terminal-table
|
|
|
|
rust
|
|
|
|
rust-bindgen
|
|
|
|
sabre
|
|
|
|
sailfish
|
|
|
|
salmon
|
|
|
|
sambamba
|
|
|
|
samblaster
|
|
|
|
samrai
|
|
|
|
samtools
|
Add samtools 1.9 (#8961)
|
2018-08-12 18:54:50 -05:00 |
|
sandbox
|
|
|
|
sas
|
|
|
|
satsuma2
|
|
|
|
savanna
|
install_tree, copy_tree can install into existing directory structures (#8289)
|
2018-08-15 09:30:09 -07:00 |
|
saws
|
|
|
|
sbt
|
install_tree, copy_tree can install into existing directory structures (#8289)
|
2018-08-15 09:30:09 -07:00 |
|
scala
|
|
|
|
scalasca
|
|
|
|
scalpel
|
|
|
|
scan-for-matches
|
|
|
|
scons
|
|
|
|
scorec-core
|
|
|
|
scorep
|
scorep: make optional packages variants (#9011)
|
2018-08-18 11:25:05 -05:00 |
|
scotch
|
|
|
|
scr
|
install_tree, copy_tree can install into existing directory structures (#8289)
|
2018-08-15 09:30:09 -07:00 |
|
screen
|
Download GNU packages from mirrors (#8992)
|
2018-08-15 23:27:21 -07:00 |
|
scripts
|
|
|
|
scrnsaverproto
|
|
|
|
sctk
|
install_tree, copy_tree can install into existing directory structures (#8289)
|
2018-08-15 09:30:09 -07:00 |
|
sdl2
|
|
|
|
sdl2-image
|
|
|
|
sed
|
Download GNU packages from mirrors (#8992)
|
2018-08-15 23:27:21 -07:00 |
|
seqan
|
|
|
|
seqprep
|
|
|
|
seqtk
|
|
|
|
serf
|
|
|
|
sessreg
|
|
|
|
setxkbmap
|
|
|
|
sga
|
|
|
|
shapeit
|
|
|
|
shared-mime-info
|
|
|
|
shiny-server
|
|
|
|
shocklibs
|
|
|
|
shoremap
|
|
|
|
shortbred
|
|
|
|
shortstack
|
|
|
|
showfont
|
|
|
|
shuffile
|
ECP VELOC Package update (#8910)
|
2018-08-08 21:40:38 -04:00 |
|
sickle
|
|
|
|
siesta
|
|
|
|
signalp
|
|
|
|
signify
|
|
|
|
silo
|
Fix two dependencies with silo. (#9153)
|
2018-09-03 16:43:00 +02:00 |
|
simplemoc
|
simplemoc: version bump (#8884)
|
2018-08-03 14:31:06 -05:00 |
|
simul
|
|
|
|
simulationio
|
|
|
|
singularity
|
singularity: new version
|
2018-08-31 08:47:24 -07:00 |
|
skilion-onedrive
|
Onedrive: a new package. (#9130)
|
2018-09-04 14:35:49 -05:00 |
|
sleef
|
|
|
|
slepc
|
|
|
|
slurm
|
|
|
|
smalt
|
|
|
|
smproxy
|
|
|
|
snakemake
|
|
|
|
snap
|
|
|
|
snap-berkeley
|
|
|
|
snap-korf
|
|
|
|
snappy
|
msgpack-c, snappy: explicitly depend on googletest (#9167)
|
2018-09-03 20:25:17 -05:00 |
|
snbone
|
|
|
|
sniffles
|
|
|
|
snpeff
|
install_tree, copy_tree can install into existing directory structures (#8289)
|
2018-08-15 09:30:09 -07:00 |
|
snphylo
|
install_tree, copy_tree can install into existing directory structures (#8289)
|
2018-08-15 09:30:09 -07:00 |
|
snptest
|
|
|
|
soap2
|
|
|
|
soapdenovo2
|
|
|
|
soapdenovo-trans
|
|
|
|
soapindel
|
|
|
|
soapsnp
|
|
|
|
sofa-c
|
|
|
|
somatic-sniper
|
|
|
|
sortmerna
|
|
|
|
sosflow
|
|
|
|
sowing
|
|
|
|
sox
|
|
|
|
spades
|
|
|
|
span-lite
|
Adds a package for span-lite header-only library (#9118)
|
2018-08-29 11:01:35 +02:00 |
|
spark
|
Java updates: new versions, classpath, and JAVA_HOME (#8613)
|
2018-08-28 14:35:13 -04:00 |
|
sparsehash
|
|
|
|
sparta
|
|
|
|
spdlog
|
|
|
|
spectrum-mpi
|
|
|
|
speex
|
|
|
|
spglib
|
|
|
|
sph2pipe
|
|
|
|
spherepack
|
|
|
|
spindle
|
|
|
|
spot
|
|
|
|
sqlite
|
Build Python 3.7 with external libffi. (#9245)
|
2018-09-14 17:07:13 -07:00 |
|
sqlitebrowser
|
|
|
|
squid
|
|
|
|
sra-toolkit
|
|
|
|
sspace-longread
|
|
|
|
sspace-standard
|
|
|
|
sst-dumpi
|
|
|
|
sst-macro
|
|
|
|
stacks
|
|
|
|
staden-io-lib
|
|
|
|
star
|
added star 2.6.1a (#9103)
|
2018-08-29 07:34:04 +02:00 |
|
star-ccm-plus
|
|
|
|
startup-notification
|
|
|
|
stat
|
add fgfs variant to stat and develop version (#8919)
|
2018-08-09 10:56:08 -05:00 |
|
stc
|
|
|
|
steps
|
steps: new package starting at 3.3 (#9173)
|
2018-09-11 14:43:15 +02:00 |
|
stow
|
Download GNU packages from mirrors (#8992)
|
2018-08-15 23:27:21 -07:00 |
|
strace
|
|
|
|
stream
|
|
|
|
strelka
|
|
|
|
stress
|
|
|
|
string-view-lite
|
Add string-view-lite package for header only library (#9125)
|
2018-08-29 06:54:20 +02:00 |
|
stringtie
|
|
|
|
structure
|
|
|
|
sublime-text
|
install_tree, copy_tree can install into existing directory structures (#8289)
|
2018-08-15 09:30:09 -07:00 |
|
subread
|
|
|
|
subversion
|
|
|
|
suite-sparse
|
|
|
|
sumaclust
|
|
|
|
sundials
|
SUNDIALS: add new versions, update hashes, and apply clang fix (#9115)
|
2018-08-31 12:14:15 -07:00 |
|
superlu
|
|
|
|
superlu-dist
|
superlu_dist should be built with 'HAVE_PARMETIS=TRUE'. (#8917)
|
2018-08-08 20:50:48 -04:00 |
|
superlu-mt
|
|
|
|
supernova
|
install_tree, copy_tree can install into existing directory structures (#8289)
|
2018-08-15 09:30:09 -07:00 |
|
sw4lite
|
|
|
|
swap-assembler
|
|
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swarm
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swfft
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swiftsim
|
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swig
|
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symengine
|
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sympol
|
|
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|
sz
|
sz: fix checksum for 2.0.2.0 (#8868)
|
2018-08-02 11:43:59 -05:00 |
|
tabix
|
|
|
|
talloc
|
|
|
|
tantan
|
|
|
|
tar
|
Download GNU packages from mirrors (#8992)
|
2018-08-15 23:27:21 -07:00 |
|
targetp
|
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task
|
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|
taskd
|
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tasmanian
|
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tassel
|
|
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tau
|
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tcl
|
|
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|
tcl-itcl
|
|
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|
tcl-tcllib
|
|
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|
tcl-tclxml
|
|
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tclap
|
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tcoffee
|
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tcptrace
|
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tcsh
|
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tealeaf
|
|
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|
templight
|
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|
templight-tools
|
|
|
|
tetgen
|
|
|
|
tethex
|
|
|
|
texinfo
|
Download GNU packages from mirrors (#8992)
|
2018-08-15 23:27:21 -07:00 |
|
texlive
|
|
|
|
the-platinum-searcher
|
install_tree, copy_tree can install into existing directory structures (#8289)
|
2018-08-15 09:30:09 -07:00 |
|
the-silver-searcher
|
|
|
|
thrift
|
Java updates: new versions, classpath, and JAVA_HOME (#8613)
|
2018-08-28 14:35:13 -04:00 |
|
thrust
|
|
|
|
tig
|
|
|
|
tinyxml
|
install_tree, copy_tree can install into existing directory structures (#8289)
|
2018-08-15 09:30:09 -07:00 |
|
tinyxml2
|
|
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tioga
|
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tk
|
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tmalign
|
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tmhmm
|
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tmux
|
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tmuxinator
|
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tophat
|
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tppred
|
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transabyss
|
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transdecoder
|
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transposome
|
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transset
|
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trapproto
|
|
|
|
tree
|
|
|
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trf
|
|
|
|
triangle
|
|
|
|
trilinos
|
trilinos: disable xlf_tpetra.patch for trilinos@develop (#9193)
|
2018-09-08 23:51:16 -05:00 |
|
trimgalore
|
|
|
|
trimmomatic
|
install_tree, copy_tree can install into existing directory structures (#8289)
|
2018-08-15 09:30:09 -07:00 |
|
trinity
|
trinity: full dependencies (#9064)
|
2018-09-04 14:35:06 -05:00 |
|
trnascan-se
|
|
|
|
turbine
|
|
|
|
turbomole
|
|
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tut
|
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twm
|
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tycho2
|
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typhon
|
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typhonio
|
|
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|
uberftp
|
|
|
|
ucx
|
|
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|
udunits2
|
|
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|
ufo-core
|
|
|
|
ufo-filters
|
|
|
|
umpire
|
|
|
|
unblur
|
|
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|
uncrustify
|
|
|
|
unibilium
|
|
|
|
unison
|
|
|
|
units
|
Download GNU packages from mirrors (#8992)
|
2018-08-15 23:27:21 -07:00 |
|
unixodbc
|
|
|
|
unuran
|
|
|
|
unzip
|
|
|
|
usearch
|
|
|
|
util-linux
|
|
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|
util-macros
|
|
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|
uuid
|
|
|
|
valgrind
|
|
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|
vampirtrace
|
|
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|
vardictjava
|
|
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|
varscan
|
|
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vc
|
|
|
|
vcftools
|
|
|
|
vcsh
|
|
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|
vdt
|
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|
vecgeom
|
|
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|
veclibfort
|
|
|
|
vegas2
|
|
|
|
veloc
|
ECP VELOC Package update (#8910)
|
2018-08-08 21:40:38 -04:00 |
|
velvet
|
|
|
|
verilator
|
|
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verrou
|
|
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|
videoproto
|
|
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|
viennarna
|
|
|
|
viewres
|
|
|
|
vim
|
Vim: add version 8.1.0338 (#9155)
|
2018-09-01 08:12:14 -05:00 |
|
virtualgl
|
|
|
|
visit
|
|
|
|
vizglow
|
|
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vmatch
|
|
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|
voropp
|
|
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|
votca-csg
|
|
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|
votca-ctp
|
|
|
|
votca-tools
|
|
|
|
votca-xtp
|
|
|
|
vpfft
|
|
|
|
vpic
|
|
|
|
vsearch
|
|
|
|
vt
|
|
|
|
vtk
|
Specify Python executable in VTK package (#9000)
|
2018-08-17 14:51:49 -05:00 |
|
vtkh
|
|
|
|
vtkm
|
|
|
|
wannier90
|
install_tree, copy_tree can install into existing directory structures (#8289)
|
2018-08-15 09:30:09 -07:00 |
|
wcslib
|
|
|
|
wget
|
Download GNU packages from mirrors (#8992)
|
2018-08-15 23:27:21 -07:00 |
|
wgsim
|
|
|
|
windowswmproto
|
|
|
|
wireshark
|
Replace pkg-config dependencies with virtual (#8783)
|
2018-08-02 13:29:04 -04:00 |
|
workrave
|
install_tree, copy_tree can install into existing directory structures (#8289)
|
2018-08-15 09:30:09 -07:00 |
|
wt
|
|
|
|
wx
|
|
|
|
wxpropgrid
|
|
|
|
x11perf
|
|
|
|
xapian-core
|
|
|
|
xauth
|
|
|
|
xbacklight
|
|
|
|
xbiff
|
|
|
|
xbitmaps
|
|
|
|
xbraid
|
|
|
|
xcalc
|
|
|
|
xcb-demo
|
|
|
|
xcb-proto
|
|
|
|
xcb-util
|
|
|
|
xcb-util-cursor
|
|
|
|
xcb-util-errors
|
|
|
|
xcb-util-image
|
|
|
|
xcb-util-keysyms
|
|
|
|
xcb-util-renderutil
|
|
|
|
xcb-util-wm
|
|
|
|
xcb-util-xrm
|
|
|
|
xclip
|
|
|
|
xclipboard
|
|
|
|
xclock
|
|
|
|
xcmiscproto
|
|
|
|
xcmsdb
|
|
|
|
xcompmgr
|
|
|
|
xconsole
|
|
|
|
xcursor-themes
|
|
|
|
xcursorgen
|
|
|
|
xdbedizzy
|
|
|
|
xditview
|
|
|
|
xdm
|
|
|
|
xdpyinfo
|
|
|
|
xdriinfo
|
|
|
|
xedit
|
|
|
|
xerces-c
|
|
|
|
xev
|
|
|
|
xextproto
|
|
|
|
xeyes
|
|
|
|
xf86bigfontproto
|
|
|
|
xf86dga
|
|
|
|
xf86dgaproto
|
|
|
|
xf86driproto
|
|
|
|
xf86miscproto
|
|
|
|
xf86rushproto
|
|
|
|
xf86vidmodeproto
|
|
|
|
xfd
|
|
|
|
xfindproxy
|
|
|
|
xfontsel
|
|
|
|
xfs
|
|
|
|
xfsinfo
|
|
|
|
xfwp
|
|
|
|
xgamma
|
|
|
|
xgc
|
|
|
|
xhmm
|
|
|
|
xhost
|
|
|
|
xineramaproto
|
|
|
|
xinit
|
|
|
|
xinput
|
|
|
|
xios
|
|
|
|
xkbcomp
|
|
|
|
xkbdata
|
|
|
|
xkbevd
|
|
|
|
xkbprint
|
|
|
|
xkbutils
|
|
|
|
xkeyboard-config
|
|
|
|
xkill
|
|
|
|
xload
|
|
|
|
xlogo
|
|
|
|
xlsatoms
|
|
|
|
xlsclients
|
|
|
|
xlsfonts
|
|
|
|
xmag
|
|
|
|
xman
|
|
|
|
xmessage
|
|
|
|
xmh
|
|
|
|
xmlf90
|
|
|
|
xmlto
|
|
|
|
xmodmap
|
|
|
|
xmore
|
|
|
|
xorg-cf-files
|
|
|
|
xorg-docs
|
|
|
|
xorg-gtest
|
|
|
|
xorg-server
|
|
|
|
xorg-sgml-doctools
|
|
|
|
xphelloworld
|
|
|
|
xplor-nih
|
|
|
|
xplsprinters
|
|
|
|
xpr
|
|
|
|
xprehashprinterlist
|
|
|
|
xprop
|
|
|
|
xproto
|
|
|
|
xproxymanagementprotocol
|
|
|
|
xqilla
|
|
|
|
xrandr
|
|
|
|
xrdb
|
|
|
|
xrefresh
|
|
|
|
xrootd
|
|
|
|
xrx
|
|
|
|
xsbench
|
|
|
|
xscope
|
|
|
|
xsd
|
new package: XSD (#8784)
|
2018-08-02 16:28:19 -04:00 |
|
xsdk
|
xsdk: disable assimp in deal.II (#9190)
|
2018-09-08 16:07:37 -05:00 |
|
xsdktrilinos
|
|
|
|
xset
|
|
|
|
xsetmode
|
|
|
|
xsetpointer
|
|
|
|
xsetroot
|
|
|
|
xsimd
|
|
|
|
xsm
|
|
|
|
xstdcmap
|
|
|
|
xtensor
|
|
|
|
xtensor-python
|
|
|
|
xterm
|
|
|
|
xtl
|
|
|
|
xtrans
|
|
|
|
xtrap
|
|
|
|
xts
|
|
|
|
xvidtune
|
|
|
|
xvinfo
|
|
|
|
xwd
|
|
|
|
xwininfo
|
|
|
|
xwud
|
|
|
|
xxhash
|
|
|
|
xz
|
|
|
|
yajl
|
|
|
|
yambo
|
|
|
|
yaml-cpp
|
|
|
|
yasm
|
|
|
|
yorick
|
install_tree, copy_tree can install into existing directory structures (#8289)
|
2018-08-15 09:30:09 -07:00 |
|
z3
|
|
|
|
zeromq
|
|
|
|
zfp
|
|
|
|
zip
|
|
|
|
zlib
|
|
|
|
zoltan
|
zoltan: fix building with Intel compilers (#8985)
|
2018-08-15 10:40:58 -05:00 |
|
zsh
|
|
|
|
zstd
|
|
|
