spack/var/spack/repos/builtin/packages
Wouter Deconinck 416615f30b
spdlog: new version 1.11.0 depends_on fmt@9: when +fmt_external (#34731)
This adds a new version of spdlog,
https://github.com/gabime/spdlog/releases/tag/v1.11.0

While the release notes are ambiguous, I think that this PR,
https://github.com/gabime/spdlog/issues/2485, indicates that
spdlog from that point on uses features of fmt@9:.
2023-01-10 13:20:32 +01:00
..
3dtk
3proxy
7zip
abacus
abduco
abi-compliance-checker
abi-dumper
abinit
abseil-cpp
abyss
accfft
acct
accumulo
ace
acfl acfl: add post-installation check by running examples (#34172) 2022-12-01 09:47:59 -07:00
ack
acl
acpica-tools
acpid
activeharmony
activemq
acts acts: new version 22.0.0 (#34826) 2023-01-07 13:56:37 +01:00
acts-dd4hep
actsvg
addrwatch
adept-utils
adf
adiak
adios
adios2 [adios2] Older versions of ifx (oneapi) fail compilation (#34819) 2023-01-10 11:39:42 +01:00
adlbx
admixtools
adms
adol-c
advancecomp
adwaita-icon-theme
aegean
aeskeyfind
aespipe
agile
agrep
aida
akantu
alan
albany
albert
alembic
alglib
allpaths-lg
alluxio
alpaka
alpgen
alquimia
alsa-lib
aluminum
amber
amd-aocl
amdblis
amdfftw
amdlibflame
amdlibm
amdscalapack
amg
amg2013
amgx
aml
amp
ampl
ampliconnoise
ampt
amr-wind Add maintainer to Exawind stack and Trilinos (#34174) 2022-11-28 17:23:17 -08:00
amrex amrex: add v23.01 and v22.12 (#34764) 2023-01-02 18:07:41 +01:00
amrfinder
amrvis
anaconda2
anaconda3 anaconda3: add 2022.10 (#34762) 2023-01-02 18:21:23 +01:00
andi
angsd
anicalculator
ant
antimony
antlr
ants
any2fasta
aocc AOCC: add v4.0.0 (#33833) 2022-12-29 10:30:35 +01:00
aocl-sparse
aoflagger
aom
aomp
apachetop
apcomp
ape
aperture-photometry
apex
apfel
apktool
apple-gl
apple-glu
apple-libunwind
apple-libuuid
applewmproto
appres
apptainer singularity, apptainer: --without-conmon into @property config_options (#34474) 2022-12-29 09:24:41 +01:00
apr
apr-util
aragorn
arbor Typo in arbor/package.py: incorrect version (#34820) 2023-01-05 13:55:31 +01:00
arborx
arc
archer
argobots
argon2
argp-standalone
args
argtable
aria2
arm-forge arm-forge: add 22.1.2 (#34569) 2022-12-21 20:09:42 +01:00
armadillo
armpl-gcc armpl-gcc: add post-installation check by running examples (#34086) 2022-11-28 13:55:51 +01:00
arpack-ng arpack-ng: add variant for ISO C binding support (#34529) 2022-12-15 10:56:13 -07:00
arrayfire
arrow arrow: dependency fixes (#33666) 2022-12-12 14:26:02 +01:00
asagi
ascent
asciidoc
asciidoc-py3
asdcplib
asdf-cxx
asio
aspa
aspcud
aspect
aspell
aspell6-de
aspell6-en
aspell6-es
aspera-cli
assimp
astra
astral
astyle
at-spi2-atk
at-spi2-core
atf
athena
atk
atlas
atmi ROCm 5.3.0 updates (#33320) 2022-12-12 13:46:20 -06:00
atom-dft
atompaw
atop
attr
audacious
audacity
audit-userspace
augustus
authd
authselect
autoconf
autoconf-archive
autodiff
autodock-gpu
autodock-vina
autofact
autogen
automaded
automake Automake requires Thread::Queue, but it is only provided with in perl+threads. (#34076) 2022-12-16 16:11:11 -08:00
avizo
aws-ofi-nccl
aws-ofi-rccl
aws-parallelcluster aws-parallelcluster: Add v2.11.9 (#34270) 2022-12-02 15:57:18 -07:00
aws-sdk-cpp aws-sdk-cpp: add v1.10.32 (#34592) 2022-12-19 11:48:31 +01:00
awscli
axel
axl
axom
babelflow
babeltrace
babl Add gimp & dependent packages (#34558) 2022-12-17 03:52:56 -07:00
bacio Change regex in bacio patch to avoid python re bug (#34668) 2022-12-29 08:50:27 +01:00
backupninja
bam-readcount
bamaddrg
bamdst
bamtools
bamutil
banner
bannergrab
barrnap
bart
barvinok
bash bash: add v5.2, readline patches (#34301) 2022-12-08 13:46:21 -07:00
bash-completion
bashtop
bat
batchedblas
batctl
bats
baurmc
bazel
bbcp
bbmap
bc
bcache bcache: Fix check for libintl to work correctly (#34383) 2022-12-08 17:37:10 -07:00
bcftools bcftools: add version 1.15.1 (#34752) 2023-01-02 18:31:08 +01:00
bcl2fastq2
bdftopcf
bdii
bdsim
bdw-gc
beagle
beakerlib
bear
beast1
beast2
beast-tracer
bedops
bedtools2
beforelight
benchmark
berkeley-db
berkeleygw berkeleygw: add back python dependencies and tweak testsuite (#34125) 2022-12-05 23:37:19 +01:00
bertini
bgpdump
bib2xhtml
bigdft-atlab
bigdft-chess
bigdft-core
bigdft-futile
bigdft-libabinit
bigdft-psolver
bigdft-spred
bigdft-suite
bigreqsproto
bind9
binutils Add texinfo dependency for binutils through version 2.38. (#34173) 2022-12-08 03:08:37 +01:00
bioawk
biobambam2
biobloom
biopieces
bird
bismark
bison
bitgroomingz
bitlbee
bitmap
bitsery
blackhat
blaspp
blast2go
blast-legacy
blast-plus
blat
blaze
blis
bliss
blitz
blktrace
bloaty
blogbench
blt
bmake
bmi
bml
bohrium
boinc-client
bolt
bonniepp
bookleaf-cpp
boost boost: apply 'intel-oneapi-linux-jam.patch' to all versions since 1.76 (#34670) 2022-12-29 10:56:45 +01:00
boostmplcartesianproduct
botan
bowtie
bowtie2
boxlib
bpp-core
bpp-phyl
bpp-phyl-omics
bpp-popgen
bpp-seq
bpp-seq-omics
bpp-suite
bracken
braker
branson
breakdancer
bref3
breseq
bricks
bridger
brigand
brltty
brotli
brpc
brunsli
brynet
bsseeker2
btop btop++: add new package (#34399) 2022-12-09 12:59:46 +01:00
bubblewrap
bucky
buddy
bueno
bufr bufr: add v11.6, 11.7, 11.7.1 (#34509) 2022-12-14 06:24:26 -07:00
bumpversion
busco
busybox
butter
butterflypack
bwa
bwtool
byacc
byobu
byte-unixbench
byteman
bzip2
c
c3d
c-ares
c-blosc
c-blosc2
c-lime
ca-certificates-mozilla
cabana cabana: version ranges (#34794) 2023-01-05 19:21:57 +01:00
cachefilesd
caffe
cairo
cairomm
caliper caliper: add version 2.9.0 (#34538) 2022-12-15 03:52:53 +01:00
callflow
callpath
camellia
camp
camx
canal
candle-benchmarks
cans
cantera
canu
cap3
capnproto
capstone
cardioid
care
casacore
cask
casper
cassandra
catalyst
catch2
cbc
cbench
cbflib
cblas
cbtf
cbtf-argonavis
cbtf-argonavis-gui
cbtf-krell
cbtf-lanl
cc65
ccache
ccfits
ccls
ccs-qcd
cctools
cdbfasta
cdd
cddlib
cdecimal
cdhit
cdo new release cdo-2.1.1 (#34548) 2022-12-16 11:16:32 -08:00
ceed
celeritas
cepgen
cereal
ceres-solver
cernlib cernlib: depends_on libxaw libxt (#34448) 2022-12-29 09:25:07 +01:00
cfitsio cfitsio: add v4.2.0 (#34316) 2022-12-06 09:18:51 -07:00
cgal
cgdb
cgdcbxd
cget
cgl
cgm
cgns
chaco
chai
chameleon
changa
channelflow
chaparral
chapel
chaplin
charliecloud
charmpp
chatterbug
check
chgcentre
chlorop
chombo
chrony
chrpath
cinch
circos
cistem
citcoms
cityhash
cjson
ck
clamav
clamr
clapack
clara
claw
clblast
cleaveland4
cleverleaf
clfft
clhep
cli11 Add new package: micromamba (#34195) 2022-12-12 14:00:41 -06:00
clinfo
clingo clingo: add version 5.6.2 (#34317) 2022-12-05 10:39:30 -07:00
clingo-bootstrap
cln
cloc
cloog
cloverleaf
cloverleaf3d
clp
clustal-omega
clustalw
cmake cmake fails with icpc warning (#34774) 2023-01-05 18:13:26 +01:00
cmaq
cmark
cmdstan
cminpack
cmocka
cmockery
cmor
cni-plugins cni-plugins: New version 1.1.1 (#34809) 2023-01-06 15:45:25 +01:00
cnmem
cnpy
cntk
cntk1bitsgd
cnvnator
codar-cheetah
code-server
codec2
codes
coevp
cohmm
coin3d
coinhsl
coinutils
collectd
collier
colm
colordiff
comd
comgr ROCm 5.3.0 updates (#33320) 2022-12-12 13:46:20 -06:00
commons-lang
commons-lang3
commons-logging
compadre
compiz
compose
compositeproto
conda4aarch64
conduit add conduit 0.8.5 release and caliper variant (#34669) 2023-01-02 16:00:44 +01:00
conmon conmon: New version 2.1.5 (#34810) 2023-01-06 15:44:55 +01:00
connect-proxy
conserver
console-bridge
constype
consul
converge
cool
coral
corenlp
coreutils
corset
cosbench
cosign
cosma
cosmoflow-benchmark
cosmomc
cosp2
costa
cotter
cowsay
cp2k
cpio
cplex
cpmd CPMD: Remove now unused "import" 2022-12-27 13:06:08 -08:00
cpp-argparse
cpp-httplib
cpp-termcolor
cppad
cppcheck
cppcodec
cppcoro
cppgsl
cpprestsdk
cppunit
cppzmq
cpu-features
cpuinfo cpuinfo: new versions, shared libs (#34544) 2022-12-15 09:00:51 +01:00
cqrlib
cquery
cracklib
cradl
cram
cray-fftw
cray-libsci
cray-mpich cray-mpich: fix dependencies for externals from manifest (#34231) 2022-12-05 12:11:56 -08:00
cray-mvapich2
cray-pmi
creduce
crmc
cromwell
cromwell-womtool
cronie
crtm
crunch
cryptopp
cryptsetup
csa-c
cscope
csdp
ctffind
ctpl
ctre
cub
cuba
cube
cube-blade
cubelib
cubew
cubist
cuda Add CUDA 12.0 (#34664) 2023-01-10 11:51:23 +01:00
cuda-memtest
cudnn
cufflinks
cunit
cupla
cups
curl
cusz
cutensor
cutlang
cutlass
cvector
cvs
cxx
cxxopts
cxxtest
cyrus-sasl
czmq
dakota
daligner
dalton
damageproto
damaris
damask
damask-grid
damask-mesh
damselfly
darshan-runtime dashan-runtime,darshan-util,py-darshan: update package versions for darshan-3.4.2 (#34583) 2022-12-21 20:18:27 +01:00
darshan-util dashan-runtime,darshan-util,py-darshan: update package versions for darshan-3.4.2 (#34583) 2022-12-21 20:18:27 +01:00
dash
datamash
dataspaces
datatransferkit
date
dateutils
davix
dbcsr
dbow2
dbus
dbus-glib
dbxtool
dcap
dcm2niix py-bidskit: new package and dcm2niix: add 1.0.20220720 (#34162) 2022-11-28 11:05:49 -07:00
dcmtk
dd4hep dd4hep: depends_on root +x +opengl when +utilityapps (#34765) 2023-01-02 17:56:34 +01:00
ddd
ddt
dealii
dealii-parameter-gui
debbuild
debugedit
decentralized-internet
deconseq-standalone
dejagnu
delly2 delly2: add v1.1.6 (#34411) 2022-12-12 11:31:26 +01:00
delphes
delta
denovogear
dftbplus
dftd3-lib
dftd4
dftfe
dhpmm-f
dhtest
dia
dialign
dialign-tx
diamond
dicom3tools
diffmark
diffsplice
diffutils
digitrounding
dihydrogen
dimemas
ding-libs
dire
direnv direnv: add v2.32.2 (#34147) 2022-11-27 22:09:53 +01:00
discovar
discovardenovo
disktype
dislin
distbench
distcc
diy
dlb dlb: new package (#34211) 2022-12-08 05:57:48 -07:00
dlib
dlpack
dmd
dmidecode
dmlc-core
dmtcp
dmxproto
dnsmap
dnsmasq
dnstop
dnstracer
docbook-xml
docbook-xsl
dock
dorian3d-dlib
dos2unix
dosfstools
dotconf
dotnet-core-sdk
double-conversion
doxygen doxygen: use tarballs instead of git checkouts and add 1.9.5 (#34654) 2023-01-02 08:44:34 -05:00
dpcpp
dpdk
draco
dracut
dramsim2
dramsim3
dray
dri2proto
dri3proto
drill
drishti New python package: Drishti (#33316) 2022-12-12 19:33:50 -07:00
dropwatch
druid
ds
dsdp
dsfmt
dsqss
dsrc
dssp
dtc
dtcmp
dtf
duperemove
dust
dwz
dxt-explorer
dyninst
dysco
e2fsprogs
e3sm-kernels
ea-utils
eagle
earlyoom
easi easi: update package, rework impalajit (#34032) 2022-11-28 15:54:21 +01:00
easybuild
ebms
ecbuild
eccodes
ecdsautils
ecflow
eckit eckit: skip broken test (#34610) 2022-12-21 20:20:05 +01:00
eclipse-gcj-parser
ecos
ecoslim
ecp-data-vis-sdk DAV: VTK-m needs to install examples for smoke test (#34611) 2022-12-20 09:56:50 -08:00
ecp-proxy-apps
ed
editline
editres
edm4hep podio, edm4hep: add v0.7.2 and v0.16.1 respectively (#34526) 2022-12-15 09:02:16 +01:00
eem
efivar
eigen
eigenexa
elasticsearch
elemental
elfio
elfutils
elk
elmerfem
elpa [ELPA] add sha256 for elpa-2022.11.001.rc2.tar.gz (#33439) 2022-12-19 04:12:02 -07:00
elsd
elsdc
elsi
emacs emacs: json variant & cleanup (#34665) 2023-01-02 07:17:04 -08:00
ember
emboss
embree
enca
enchant
energyplus
entrezdirect
entt
environment-modules
enzo
enzyme
eospac
epics-base
epics-ca-gateway
epics-pcas
epics-snmp
epsic Add packages related to the LWA software stack (#34112) 2022-12-05 09:48:04 -08:00
eq-r
er
erfa
erlang
ermod
erne
es-shell
esmf Add static-only option for ESMF (#34576) 2022-12-17 04:27:22 -07:00
espanso
essl
esys-particle
etcd
ethminer
ethtool
etsf-io
eve
evemu
everytrace
everytrace-example
evieext
evtgen evtgen: add v02.02.00 (#34187) 2022-11-29 09:54:14 -07:00
exa
exabayes
exaca
exago
examinimd
examl
exampm
exasp2
exawind Add maintainer to Exawind stack and Trilinos (#34174) 2022-11-28 17:23:17 -08:00
exaworks add py-psij-python and py-pystache packages (#34357) 2022-12-21 20:07:35 -07:00
exciting
exempi
exiv2 Add gimp & dependent packages (#34558) 2022-12-17 03:52:56 -07:00
exmcutils
exodusii
exonerate
exonerate-gff3
expat expat: Add latest release 2.5.0 with security fixes (#34453) 2022-12-12 00:08:44 -07:00
expect
express
extrae
exuberant-ctags
eztrace
f2c
f3d
f77-zmq
f90cache
fabtests
fairlogger
faiss
fakechroot
fakexrandr
falcon
fann
faodel
fargparse Update pFunit, add gFTL, gFTL-Shared, fArgParse, pFlogger, yaFyaml (#34476) 2022-12-13 22:40:33 +01:00
fasd
fast-global-file-status
fasta
fastani
fastdb
fastdfs
fastjar
fastjet
fastjson
fastmath
fastme
fastp
fastphase
fastq-screen
fastqc
fastqvalidator
fasttext
fasttransforms
fasttree
fastx-toolkit
faust
fbgemm
fca
fcgi
fd
fd-find
fdb
fdupes
feh
fenics
fenics-basix
fenics-dolfinx
fenics-ufcx
feq-parse
fermi
fermikit
fermisciencetools
ferret
feynhiggs
ffb
ffmpeg
ffr
ffsb
ffte
fftw
fftx
fgsl
fides
figlet
figtree
file
filebench
filo
filtlong
fimpute
findbugs
findutils
fio
fipscheck
fish
fixesproto
fj
fjcontrib
fl
flac
flamemaster
flann
flap
flash
flashdimmsim
flatbuffers
flatcc
flcl
flecsale
flecsi
flecsph
fleur
flex
flexi
flexiblas
flibcpp
flink
flint
flit
fltk
flume
flux-core Automated deployment to update package flux-core 2022-12-12 (#34456) 2022-12-12 11:47:36 -07:00
flux-pmix
flux-sched
fluxbox
fms fms: add v2019.01.03 (#34511) 2022-12-14 04:50:00 -07:00
fmt Build tests for fmt conditionally (#34424) 2022-12-12 16:49:05 +01:00
foam-extend foam-extend: add v4.1 (released Oct 2019) (#34398) 2022-12-12 07:16:17 -07:00
folly
font-util
fontcacheproto
fontconfig
fontsproto
fonttosfnt
form
formetis
fortran
fortrilinos
fossil
foundationdb
fox
fp16
fpc
fpchecker
fping
fplll
fplo
fpm
fpocket
fpzip
fqtrim
fr-hit
fraggenescan
freebayes
freefem
freeglut freeglut: add dependency on libxxf86vm (#34293) 2022-12-05 11:57:27 +01:00
freeimage
freeipmi
freesurfer
freetype
freexl
fribidi
frontier-client
frontistr
fseq
fsl
fslsfonts
fstobdf
fstrack
ftgl
ftjam
ftk ftk: add 0.0.7.1 (#34146) 2022-12-07 22:13:46 +01:00
ftobjectlibrary
ftxui
fujitsu-fftw
fujitsu-frontistr
fujitsu-mpi
fujitsu-ssl2
fullock
funhpc
fuse-overlayfs
fxdiv
fxt
fyba
fzf
g2
g2c
g2o
g2tmpl
g4abla
g4emlow geant4: version bumps for Geant4 11.1.0 release (#34428) 2022-12-09 12:26:22 -07:00
g4ensdfstate
g4incl
g4ndl geant4: version bumps for Geant4 11.1.0 release (#34428) 2022-12-09 12:26:22 -07:00
g4neutronxs
g4particlexs
g4photonevaporation
g4pii
g4radioactivedecay
g4realsurface
g4saiddata
g4tendl
gamess-ri-mp2-miniapp
gams
gapbs
gapcloser
gapfiller
garfieldpp
gasnet
gatb-core
gate
gatepet2stir
gatetools
gatk
gaudi
gaussian
gaussian-src
gaussian-view
gawk
gbl
gblocks
gcc
gccmakedep
gccxml
gchp
gconf
gcta
gdal GDAL: add v3.6.2 (#34823) 2023-01-07 13:57:18 +01:00
gdb
gdbm
gdk-pixbuf
gdl
gdrcopy
geant3
geant4 geant4: rm preference for 10.7.3 now that 11.1.0 is out (#34445) 2022-12-12 09:05:47 -07:00
geant4-data geant4-data: depends_on g4emlow@7.9.1 when @10.6 (#34444) 2022-12-12 07:11:42 -07:00
geant4-vmc
gearshifft
gegelati
gegl Add gimp & dependent packages (#34558) 2022-12-17 03:52:56 -07:00
gemma
gemmlowp
genemark-et
genesis
genfit genfit: add v02-00-01 (#34159) 2022-11-28 17:09:47 -08:00
gengeo
gengetopt
genie
genomefinisher
genometools
genomeworks
genrich genrich: add needed zlib dependency (#34753) 2023-01-02 18:29:23 +01:00
geode
geoip
geoip-api-c
geopm
geos GEOS: add v3.10-3.11 (#34473) 2022-12-12 11:50:03 -08:00
gettext
gexiv2 Add gimp & dependent packages (#34558) 2022-12-17 03:52:56 -07:00
gflags
gfsio
gftl Update pFunit, add gFTL, gFTL-Shared, fArgParse, pFlogger, yaFyaml (#34476) 2022-12-13 22:40:33 +01:00
gftl-shared Update pFunit, add gFTL, gFTL-Shared, fArgParse, pFlogger, yaFyaml (#34476) 2022-12-13 22:40:33 +01:00
gh
ghost
ghostscript
ghostscript-fonts
giblib
giflib
gimp Add gimp & dependent packages (#34558) 2022-12-17 03:52:56 -07:00
ginac
ginkgo ROCm 5.3.0 updates (#33320) 2022-12-12 13:46:20 -06:00
giraph
git
git-annex
git-fat-git
git-filter-repo git-filter-repo: add new package (#34690) 2022-12-29 10:53:19 +01:00
git-imerge
git-lfs
gitconddb
gl2ps
glab
glew
glfmultiples
glfw
glib glib: add 2.74.3 (#34603) 2022-12-21 20:40:04 +01:00
glib-networking
glibmm
glimmer
glm
global
globalarrays
glog
gloo
glpk
glproto
gluegen
glusterfs
glvis
glx
gmake gmake: 4.4, remove alpha release (#34709) 2023-01-02 14:07:24 -08:00
gmap-gsnap
gmic Add G'MIC package with only the "cli" target available (#34533) 2022-12-15 09:19:50 +01:00
gmime
gmodel
gmp
gmsh
gmt
gmtsar
gnat
gnds
gnome-common
gnuconfig
gnupg
gnuplot gnuplot: make readline optional (#34179) 2022-12-01 09:11:14 -07:00
gnuradio
gnutls
go go: New version 1.19.4 (#34812) 2023-01-06 15:44:12 +01:00
go-bootstrap
go-md2man go-md2man: New version 2.0.2 (#34811) 2023-01-06 15:44:35 +01:00
gobject-introspection
goblin-hmc-sim
goma
google-crc32c
googletest
gosam-contrib
goshimmer
gotcha
gource
gpcnet
gperf
gperftools
gpgme
gpi-2
gpi-space
gplates
gprolog
gptl
gptune
gpu-burn
gqrx
gr-osmosdr
grabix
grace
grackle
gradle
grads
grafana
grandr
graph500
graphblast
graphicsmagick
graphite2 graphite2: add dependency on freetype (#34292) 2022-12-05 14:38:52 -08:00
graphlib
graphmap
graphviz
grass
graylog2-server
grep
grib-api
grib-util
grid
gridlab-d
grnboost
groff
gromacs Gromacs: added version 2022.4 (#34599) 2022-12-19 15:30:20 +01:00
gromacs-chain-coordinate
gromacs-swaxs
grpc
gsettings-desktop-schemas
gsl
gslib
gtk-doc
gtkmm
gtkorvo-atl
gtkorvo-cercs-env
gtkorvo-dill
gtkorvo-enet
gtkplus
gtksourceview
gts
guacamole-client
guacamole-server
guidance
guile
gunrock
gurobi gurobi: add v10.0.0, v9.5.2 (#34291) 2022-12-05 11:58:09 +01:00
gxsview
gzip
h2database
h5bench
h5cpp
h5hut
h5part
h5utils
h5z-zfp
haccabana Add HACCabana proxy app (#34567) 2022-12-16 14:03:08 -07:00
hacckernels
hackrf-host
hadoop
hadoop-xrootd
hal
half
hama
hapcut2
hapdip
haploview
haproxy
hardlink
harfbuzz
harminv
hashcat
haveged
hazelcast
hbase
hbm-dramsim2
hc
hcoll
hdf
hdf5 hdf5: "hdf5@1.13:" needs a depends_on "cmake@3.18:" for build. (#34447) 2022-12-12 15:12:55 +01:00
hdf5-blosc
hdf5-vfd-gds
hdf5-vol-async Update hdf5 vol async version (#34376) 2022-12-08 05:37:34 -07:00
hdf5-vol-cache
hdf5-vol-external-passthrough
hdf5-vol-log
hdf-eos2
hdf-eos5
hdfview
healpix-cxx
heaptrack
heasoft
heffte
helib
helics helics: add v3.3.2 (#34297) 2022-12-05 11:42:03 +01:00
help2man
henson
hepmc
hepmc3
hepmcanalysis
heppdt
heputils
hercules
hermes feat(Hermes)!: add yaml-cpp dependency (#34330) 2022-12-05 09:49:45 -08:00
herwig3 Herwig3: make njet, vbfnlo dependencies optional... (#33941) 2022-12-01 17:19:46 -08:00
herwigpp
hevea
hh-suite
hibench
hicolor-icon-theme
hicops
highfive
highway
highwayhash
hiop Fix dependency specification for CuSolver variant in HiOp. (#34138) 2022-12-06 21:57:57 +01:00
hip ROCm 5.3.0 updates (#33320) 2022-12-12 13:46:20 -06:00
hip-rocclr ROCm 5.3.0 updates (#33320) 2022-12-12 13:46:20 -06:00
hipace
hipblas ROCm 5.3.0 updates (#33320) 2022-12-12 13:46:20 -06:00
hipcub ROCm 5.3.0 updates (#33320) 2022-12-12 13:46:20 -06:00
hipfft rocm packages: Update the version for 5.3.0 release (#33405) 2023-01-09 18:50:00 -08:00
hipfort ROCm 5.3.0 updates (#33320) 2022-12-12 13:46:20 -06:00
hipify-clang ROCm 5.3.0 updates (#33320) 2022-12-12 13:46:20 -06:00
hipsolver rocm packages: Update the version for 5.3.0 release (#33405) 2023-01-09 18:50:00 -08:00
hipsparse ROCm 5.3.0 updates (#33320) 2022-12-12 13:46:20 -06:00
hipsycl
hiredis hiredis: updated package definition to use CMake (#33949) 2022-11-29 13:44:50 +01:00
hisat2
hisea
hive
hivex
hmmer Added ARM/aarch64 conflict to Eddy/Rivas lab tools (#34190) 2022-12-12 13:26:57 +01:00
hohqmesh
homer
hoomd-blue
hoppet
hotspot
hpcc
hpccg
hpcg
hpctoolkit hpctoolkit: replace filter_file with upstream patch (#34604) 2022-12-21 20:18:58 +01:00
hpcviewer
hpcx-mpi
hpddm
hpgmg
hping
hpl
hpx
hpx5
hpx-kokkos
hsa-rocr-dev ROCm 5.3.0 updates (#33320) 2022-12-12 13:46:20 -06:00
hsakmt
hsakmt-roct ROCm 5.3.0 updates (#33320) 2022-12-12 13:46:20 -06:00
hsf-cmaketools
hssp
hstr
hto4l
htop htop: new version 3.2.1 (#34346) 2022-12-06 12:03:46 -07:00
htslib
http-get
http-load
http-parser
http-ping
http-post
httpd
httperf
httpie
httping
httpress
hub
hudi
hugo
hunspell
hw-probe
hwdata
hwloc Support for building Pmix with Debian/Ubuntu external dependencies (#32690) 2022-12-09 18:30:45 -08:00
hybpiper
hybrid-lambda
hybridsim
hydra
hydrogen
hypar
hyperfine
hyperqueue
hyperscan
hyphen
hyphy
hypre Add CUDA 12.0 (#34664) 2023-01-10 11:51:23 +01:00
hypre-cmake
hztool
i3
ibm-databroker
ibm-java
ibmisc
icarus
iceauth
icedtea
icet
ico
icu4c
id3lib
idba
idl
iegenlib
ignite
igprof
igraph
igv
igvtools
ike-scan
ilmbase
ima-evm-utils
imagemagick
imake
imath
imgui
imlib2
imp
impalajit easi: update package, rework impalajit (#34032) 2022-11-28 15:54:21 +01:00
improved-rdock
impute2
infernal Added ARM/aarch64 conflict to Eddy/Rivas lab tools (#34190) 2022-12-12 13:26:57 +01:00
influxdb
iniparser
inputproto
intel
intel-daal
intel-gpu-tools
intel-gtpin
intel-ipp
intel-llvm
intel-mkl intel-mkl: It is only available for x86_64 (#34391) 2022-12-08 18:10:00 -07:00
intel-mpi
intel-mpi-benchmarks
intel-oneapi-advisor 2023.0.0 oneAPI release promotion (#34617) 2022-12-20 08:47:08 -07:00
intel-oneapi-ccl 2023.0.0 oneAPI release promotion (#34617) 2022-12-20 08:47:08 -07:00
intel-oneapi-compilers intel-oneapi-compilers: add v2023.0.0 (#34571) 2022-12-16 21:38:51 -07:00
intel-oneapi-compilers-classic 2023.0.0 oneAPI release promotion (#34617) 2022-12-20 08:47:08 -07:00
intel-oneapi-dal 2023.0.0 oneAPI release promotion (#34617) 2022-12-20 08:47:08 -07:00
intel-oneapi-dnn 2023.0.0 oneAPI release promotion (#34617) 2022-12-20 08:47:08 -07:00
intel-oneapi-dpct 2023.0.0 oneAPI release promotion (#34617) 2022-12-20 08:47:08 -07:00
intel-oneapi-dpl intel-oneapi-dpl: add v2022.0.0 (#34601) 2022-12-18 13:44:23 -05:00
intel-oneapi-inspector 2023.0.0 oneAPI release promotion (#34617) 2022-12-20 08:47:08 -07:00
intel-oneapi-ipp 2023.0.0 oneAPI release promotion (#34617) 2022-12-20 08:47:08 -07:00
intel-oneapi-ippcp 2023.0.0 oneAPI release promotion (#34617) 2022-12-20 08:47:08 -07:00
intel-oneapi-itac 2023.0.0 oneAPI release promotion (#34617) 2022-12-20 08:47:08 -07:00
intel-oneapi-mkl 2023.0.0 oneAPI release promotion (#34617) 2022-12-20 08:47:08 -07:00
intel-oneapi-mpi 2023.0.0 oneAPI release promotion (#34617) 2022-12-20 08:47:08 -07:00
intel-oneapi-tbb 2023.0.0 oneAPI release promotion (#34617) 2022-12-20 08:47:08 -07:00
intel-oneapi-vpl feat: 🎸 Add new 2023.0.0 oneVPL package (#34642) 2022-12-21 11:07:41 -07:00
intel-oneapi-vtune 2023.0.0 oneAPI release promotion (#34617) 2022-12-20 08:47:08 -07:00
intel-parallel-studio intel-parallel-studio: package is only available for x86_64 (#34392) 2022-12-12 12:09:29 +01:00
intel-pin
intel-tbb
intel-xed
interproscan
intltool
ioapi
ior
iozone
ip
ip2
ipcalc
iperf2
iperf3
ipopt
iproute2
iptraf-ng
iq-tree
iqtree2
irep
isaac
isaac-server
isc-dhcp
isescan
isl
iso-codes
ispc
istio
itensor
itk
itstool
itsx
iwyu
jackcess
jafka
jags
jali
jansi
jansi-native
jansson
jasper
jbigkit
jblob
jchronoss
jdk
jellyfish jellyfish: add variants for python and ruby bindings (#33832) 2022-12-05 14:10:57 -07:00
jemalloc
jetty-project
jhpcn-df
jimtcl
jline3
jmol
jogl
jose
jpegoptim
jq jq: set -D_REENTRANT for builds on darwin (#34691) 2022-12-29 10:49:09 +01:00
json-c
json-cwx
json-fortran
json-glib
jsoncpp
jsonnet
jstorm
jube jube: Add versions 2.5.0 and 2.5.1 (#34783) 2023-01-03 12:17:32 -08:00
judy
julea
julia julia: have recipe explicitly use Spack compiler wrapper (#34365) 2022-12-12 19:53:26 +01:00
junit4
justbuild justbuild: add v1.0.0 (#34467) 2022-12-14 01:17:42 -07:00
jxrlib-debian
k8
kadath
kafka
kahip
kaiju
kakoune
kaks-calculator
kaldi
kalign
kallisto
karma
kassiopeia
kbd
kbproto
kcov
kdiff3
kea
kealib update kealib to 1.5.0 (#34237) 2022-12-07 11:49:41 -08:00
keepalived
keepassxc
kentutils
keyutils
kibana
kicad
kim-api
kinesis
kineto
kitty
kmergenie
kmod
knem
kokkos kokkos: add v3.7.01 (#34645) 2022-12-22 09:45:13 +01:00
kokkos-kernels
kokkos-kernels-legacy
kokkos-legacy
kokkos-nvcc-wrapper
kraken
kraken2
krakenuniq
krb5 Add new package: micromamba (#34195) 2022-12-12 14:00:41 -06:00
krims
kripke kripke: add cuda and rocm support (#34257) 2023-01-06 15:57:00 -08:00
kubernetes
kvasir-mpl
kvtree
kylin
ladot
laghos
lame
lammps LAMMPS: Add new versions (#32522) 2022-12-05 12:52:10 -05:00
landsfcutil
lanl-cmake-modules
lapackpp
last
lastz
laszip
latex2html
latte
launchmon
lazyten
lbann
lbxproxy
lbzip2
lcals
lcgenv
lcio lcio: add latest version (#34527) 2022-12-15 05:06:59 +01:00
lcms
lcov
ldak
ldc
ldc-bootstrap
legion
lemon
leptonica
lerc
less
lesstif
leveldb
lftp
lhapdf
lhapdf5
lhapdfsets
libabigail
libaec
libaio
libao
libapplewm
libapreq2
libarchive
libasr
libassuan
libatasmart
libatomic-ops
libbacktrace
libbeagle
libbeato
libbigwig
libbinio
libblastrampoline
libbsd
libbson
libbytesize
libc
libcanberra
libcap libcap: 2.66 & GOLANG=no (#34813) 2023-01-10 13:02:32 +01:00
libcap-ng
libcatalyst Paraview catalyst updates (#34364) 2022-12-07 10:27:47 -08:00
libceed libceed: add v0.11.0 (#34694) 2022-12-29 10:31:25 +01:00
libcerf
libcgroup
libcint libcint: Fix +coulomb_erf and add +pypzpx (#34524) 2022-12-15 05:31:58 +01:00
libcircle
libconfig
libconfuse
libcroco
libctl meep: add new versions and additional variants incl. dependencies (#34242) 2022-12-07 11:44:26 -08:00
libcudf
libcuml
libcumlprims
libcxxwrap-julia
libcyaml
libdaemon
libdap4
libdatrie
libdc1394
libde265 Add gimp & dependent packages (#34558) 2022-12-17 03:52:56 -07:00
libdeflate
libdistributed
libdivsufsort
libdmx
libdrm
libdwarf
libeatmydata
libecpint
libedit
libefence
libelf libelf: fix build on macOS x86_64 (#34646) 2022-12-22 14:58:32 -07:00
libemos
libepoxy
libestr
libev
libevdev
libevent Support for building Pmix with Debian/Ubuntu external dependencies (#32690) 2022-12-09 18:30:45 -08:00
libevpath
libexif
libfabric
libfastcommon
libfastjson
libffi
libffs
libfive
libflame
libfms
libfontenc
libfs
libfuse
libfyaml
libgain
libgcrypt
libgd
libgdsii meep: add new versions and additional variants incl. dependencies (#34242) 2022-12-07 11:44:26 -08:00
libgeotiff
libgff
libgit2 libgit2: add pcre dependency for @0.99: (#34289) 2022-12-12 11:55:49 +01:00
libgpg-error
libgpuarray
libgridxc
libgssglue
libgta
libgtextutils
libharu
libhbaapi
libheif
libhio
libhugetlbfs
libiberty
libibumad
libical
libicd libicd: macOS now supported (#34483) 2022-12-13 07:12:00 -07:00
libice
libiconv
libid3tag
libidl
libidn2
libimagequant
libimobiledevice
libinih
libint
libisal
libiscsi
libjpeg
libjpeg-turbo
libjson
libjwt
libjxl Add gimp & dependent packages (#34558) 2022-12-17 03:52:56 -07:00
libkcapi
libkml
libksba
liblas
liblbfgs
liblbxutil
liblockfile
liblognorm
liblouis
libluv
liblzf
libmacaroons
libmad
libmatheval
libmaus2
libmaxminddb
libmbim
libmcrypt
libmd
libmesh
libmetalink
libmicrodns
libmicrohttpd
libmmtf-cpp
libmng
libmnl
libmo-unpack
libmodbus
libmonitor
libmpdclient
libmypaint Add gimp & dependent packages (#34558) 2022-12-17 03:52:56 -07:00
libnbc
libndp
libnet
libnetfilter-conntrack
libnetfilter-cthelper
libnetfilter-cttimeout
libnetfilter-queue
libnetworkit
libnfnetlink
libnfs
libnfsidmap
libnftnl
libnids
libnl
libnotify
libnova
libnrm libnrm: allow mpi other than mpich (#34232) 2022-12-07 11:57:13 -08:00
libnsl
libogg
liboldx
libopts
libp11
libpam
libpaper
libpcap
libpciaccess
libpeas
libpfm4
libpipeline
libplist
libpmemobj-cpp
libpng libpng static (#34578) 2023-01-02 15:12:41 +01:00
libpressio
libpressio-adios2
libpressio-errorinjector
libpressio-nvcomp
libpressio-opt
libpressio-rmetric
libpressio-sperr
libpressio-tools
libpressio-tthresh
libproxy package/libproxy: fix py3 install (#34431) 2023-01-04 15:01:13 -06:00
libpsl libpsl: new versions through 0.21.2 (#34699) 2022-12-29 10:22:27 +01:00
libpsml
libpthread-stubs
libpulsar
libqglviewer
libqrencode
libquo
libraqm
libraw1394
librdkafka
librelp
libreproc Add new package: micromamba (#34195) 2022-12-12 14:00:41 -06:00
libressl
libristra
librmm
librom
librsb
librsvg librsvg: add 2.40.21, which does not require rust (#34585) 2022-12-22 11:28:30 +01:00
librtlsdr
librttopo
libsakura
libsamplerate
libseccomp libseccomp: New version 2.5.4 (#34814) 2023-01-06 15:43:48 +01:00
libsecret
libsharp
libshm
libsigcpp
libsignal-protocol-c
libsigsegv
libslirp
libsm
libsndfile
libsodium
libsolv Add new package: micromamba (#34195) 2022-12-12 14:00:41 -06:00
libspatialindex
libspatialite
libspiro
libsplash
libspng
libssh
libssh2
libstdcompat
libsvm
libszip
libtar
libtasn1
libtermkey set PREFIX in make() for some packages (#34773) 2023-01-04 15:08:15 +01:00
libthai
libtheora
libtiff
libtirpc
libtlx
libtomlc99
libtommath
libtool
libtorrent
libtree
libuecc
libunistring
libunwind
libusb
libusbmuxd
libuser
libuuid
libuv
libuv-julia
libvdwxc
libverto
libvips libvips: adding version 8.13.3 (#34228) 2022-12-02 15:32:22 -07:00
libvorbis
libvori
libvpx
libvterm Fix libvterm and libtermkey packages (#34776) 2023-01-04 10:27:21 +01:00
libwebp Add gimp & dependent packages (#34558) 2022-12-17 03:52:56 -07:00
libwebsockets
libwhich
libwindowswm
libwmf Add gimp & dependent packages (#34558) 2022-12-17 03:52:56 -07:00
libx11
libxau libxau: add libs property (#34288) 2023-01-02 18:47:18 +01:00
libxaw
libxaw3d
libxc libxc: add v6.0.0 (#34621) 2023-01-02 04:26:54 -08:00
libxcb
libxcomposite
libxcrypt libxcrypt: building @:4.4.17 requires automake@1.14: 2022-12-08 03:17:28 +01:00
libxcursor
libxdamage
libxdmcp
libxevie
libxext
libxfixes
libxfont
libxfont2
libxfontcache
libxft
libxi
libxinerama
libxkbcommon
libxkbfile
libxkbui
libxml2
libxmu
libxp
libxpm
libxpresent
libxprintapputil
libxprintutil
libxrandr
libxrender
libxres
libxscrnsaver
libxshmfence
libxslt
libxsmm libxsmm: Add build dependency on binutils (#34863) 2023-01-10 11:22:01 +01:00
libxstream
libxt
libxtrap
libxtst
libxv
libxvmc
libxxf86dga
libxxf86misc
libxxf86vm
libyaml
libyogrt
libzip
libzmq libzmq: make location of libsodium explicit (#34553) 2022-12-15 16:17:15 -07:00
liggghts
lighttpd
ligra
likwid likwid: add a permission fixing script a la singularity (#33503) 2022-12-07 15:51:02 +01:00
linkphase3
linktest
linsys-v
linux-headers
linux-pam
lis
listres
lizard
lksctp-tools
llvm LLVM: Update HWLOC dep version (#34780) 2023-01-03 12:42:49 -08:00
llvm-amdgpu ROCm 5.3.0 updates (#33320) 2022-12-12 13:46:20 -06:00
llvm-doe
llvm-openmp
llvm-openmp-ompt
lm-sensors
lmbench
lmdb
lmod
lndir
lodepng
log4c
log4cplus
log4cpp
log4cxx
logrotate
logstash
loki
looptools
lordec
lorene
lp-solve
lrslib
lrzip
lsf
lshw
lsof
lsscsi
ltp
ltr-retriever
ltrace
lua
lua-bit32
lua-bitlib
lua-ffi
lua-lpeg
lua-luafilesystem
lua-luajit
lua-luajit-openresty
lua-luaposix
lua-mpack
lua-sol2
lucene
luit
lulesh
lumpy-sv
lustre
lvarray
lvm2
lwgrp
lwm2
lwtnn
lxc
lynx
lz4
lzma
lzo
lzop
m4
macfuse
macsio
mad-numdiff
madgraph5amc
madx
mafft MAFFT: Add latest version 7.505 (#34855) 2023-01-09 16:09:13 -08:00
magics
magma Package magma: cleaned up cmake config (#33766) 2022-12-07 16:30:20 +01:00
mahout
makedepend
maker
mallocmc
maloc
man-db
mapnik
mapserver
mapsplice2
maq
margo
mariadb
mariadb-c-client
mark
masa
mash
masurca
mathematica
matio
matlab
maven
maverick
mawk
mbdyn
mbedtls
mc
mcl
mcpp
mctc-lib
mcutils
mdsplus
mdtest
med
meep meep: add new versions and additional variants incl. dependencies (#34242) 2022-12-07 11:44:26 -08:00
mefit
megadock
megahit
melissa
memaxes
memcached
meme
memkind
memsurfer
memtester
meraculous
mercurial mercurial/py-pybind11: print_string no longer exists (#34340) 2022-12-06 09:28:00 -08:00
mercury
mesa mesa: new versions up to v22.3.2 (#34760) 2023-01-02 18:11:03 +01:00
mesa18
mesa-demos
mesa-glu
meshkit
meshtool
meson Update py-meson-python (0.11.0, 0.12.0) and meson (0.64.1, 1.0.0) (#34675) 2022-12-23 19:22:19 -07:00
mesquite
metabat metabat: adding missing build dependency (#34530) 2022-12-15 09:23:59 +01:00
metaeuk
metall
metaphysicl
methyldackel
metis
metkit
mfem MFEM: fix issue with cxxflags (#34435) 2022-12-12 16:52:00 +01:00
mg
mgard
mgardx
mgcfd-op2
mgis
microbiomeutil
micromamba Add new package: micromamba (#34195) 2022-12-12 14:00:41 -06:00
microsocks
migraphx rocm packages: Update the version for 5.3.0 release (#33405) 2023-01-09 18:50:00 -08:00
migrate
mii
millepede
mimalloc
minc-toolkit
minced
mindthegap
miniaero
miniamr
miniapp-ascent
miniasm
miniconda2
miniconda3 miniconda3: add 22.11.1 (#34761) 2023-01-02 18:22:45 +01:00
minife
miniforge3
minigan
minighost
minigmg
minimap2
minimd
minio
miniqmc
minisign
minismac2d
minitri
minivite
minixyce
minizip
minuit
miopen-hip rocm packages: Update the version for 5.3.0 release (#33405) 2023-01-09 18:50:00 -08:00
miopen-opencl rocm packages: Update the version for 5.3.0 release (#33405) 2023-01-09 18:50:00 -08:00
miopen-tensile Drop support for older rocm releases - 4.5.0 till 5.0.2 (#34264) 2022-12-05 10:47:45 -08:00
miopengemm rocm packages: Update the version for 5.3.0 release (#33405) 2023-01-09 18:50:00 -08:00
mira
miranda
mirdeep2
mitofates
mitos
mivisionx rocm packages: Update the version for 5.3.0 release (#33405) 2023-01-09 18:50:00 -08:00
mixcr
mkfontdir
mkfontscale
mlhka
mlirmiopen rocm packages: Update the version for 5.3.0 release (#33405) 2023-01-09 18:50:00 -08:00
mlocate
mlperf-deepcam
mlst
mmg
mmseqs2 mmseqs2: new package (#34189) 2022-12-05 11:38:56 +01:00
mmv
moab
mochi-margo add mochi-margo 0.11.1 point release (#34271) 2022-12-02 15:56:29 -07:00
mochi-thallium
model-traits
modeltest-ng
modern-wheel
modylas
mokutil
molcas
mold
molden
mongo-c-driver
mongo-cxx-driver Update mongo-cxx-driver (#34843) 2023-01-10 11:38:23 +01:00
mongodb-async-driver
mono
montage
moosefs
moreutils
mosh
mosquitto
mothur
motif
motioncor2
mount-point-attributes
mpark-variant
mpas-model
mpb meep: add new versions and additional variants incl. dependencies (#34242) 2022-12-07 11:44:26 -08:00
mpc
mpdecimal
mpe2
mpest
mpfi
mpfr
mpi
mpi-bash
mpi-serial
mpibind
mpich
mpifileutils
mpilander
mpileaks
mpip
mpir
mpitrampoline mpitrampoline: New version 5.2.0 (#34796) 2023-01-06 15:04:59 +01:00
mpiwrapper mpiwrapper: New version 2.10.1 (#34850) 2023-01-09 18:02:45 -08:00
mpix-launch-swift
mpl mpl: add v0.2.1, v0.2.0 (#34716) 2022-12-30 09:21:58 -08:00
mpt
mptensor
mrbayes
mrbench
mrchem
mrcpp
mrnet
mrtrix3
mscgen
msgpack-c
mshadow
msmc
msmc2
msmpi Windows: package defaults and MPI detection (#34614) 2023-01-03 08:32:18 -08:00
mstk
mt-metis
mujoco
multitail
multitime
multiverso
mumax mumax: Set NVCC_CCBIN to spack compiler wrapper (#34754) 2023-01-02 18:28:45 +01:00
mummer
mummer4
mumps
munge
muparser
muparserx
muscle
muse
music
musl
must
muster
mutationpp
mvapich2
mvapich2-gdr
mvapich2x
mxm
mxml
mxnet
mypaint-brushes Add gimp & dependent packages (#34558) 2022-12-17 03:52:56 -07:00
mysql
mysqlpp
n2p2
nacos
nag
nalu
nalu-wind Add maintainer to Exawind stack and Trilinos (#34174) 2022-11-28 17:23:17 -08:00
namd
nano
nanoflann
nanomsg
nanopb
nasm
nauty
navi
nbdkit
ncbi-magicblast
ncbi-rmblastn
ncbi-toolkit
ncbi-vdb
nccl
nccl-tests
nccmp
ncdu
ncftp
ncio
ncl ncl: add RPC lib with ncl+hdf4 (#34451) 2022-12-15 09:22:00 +01:00
nco nco: add v5.0.6 (#34512) 2022-12-15 15:42:13 -07:00
ncompress
ncurses
ncview
ndiff
ndzip
neartree
nek5000
nekbone
nekcem
neko neko: add v0.5.0 (#34640) 2022-12-21 11:02:37 -07:00
nekrs
nektar
nektools
nemsio
nemsiogfs
neo4j
neovim
nest
net-snmp
netcdf-c netcdf-c: add libxml2 when +dap (#34178) 2022-12-12 11:04:38 +01:00
netcdf-cxx netcdf-cxx: add patch to fix macOS build (#34588) 2022-12-19 11:46:33 +01:00
netcdf-cxx4
netcdf-fortran
netdata
netgauge
netgen
netkit-ftp
netlib-lapack
netlib-scalapack
netlib-xblas
netpbm
netperf
nettle
neuron
neve neve: add new package (#34596) 2022-12-22 07:27:07 -07:00
newt
nextflow Nextflow, Tower Agent, Tower CLI: updates (#34515) 2022-12-14 11:44:22 -07:00
nf-tower-agent Nextflow, Tower Agent, Tower CLI: updates (#34515) 2022-12-14 11:44:22 -07:00
nf-tower-cli Nextflow, Tower Agent, Tower CLI: updates (#34515) 2022-12-14 11:44:22 -07:00
nfft
nfs-ganesha
nfs-utils
nghttp2
nginx
ngmerge
ngmlr
ngspice
nicstat
nim
ninja
ninja-fortran
nix
njet
nlcglib
nlohmann-json
nlohmann-json-schema-validator
nlopt
nmap
nn-c
nnpack
nnvm
node-js Node.js: new versions, newer Python support, macOS fixes (#34478) 2022-12-19 11:40:31 +01:00
notmuch
npb
npm
npth
nrm
ns-3-dev
nseg
nsimd
nspr
nss
ntirpc
ntl
ntpoly
numactl
numamma
numap
numdiff
nut
nvcomp
nvdimmsim
nvhpc nvhpc: add v22.11 (#34410) 2022-12-12 11:35:00 +01:00
nvptx-tools
nvshmem
nvtop
nwchem nwchem: restricting current versions to python@3.9 at latest (#34506) 2022-12-16 17:20:19 +01:00
nyancat
ocaml
ocamlbuild
occa
oce
oci-systemd-hook
ocl-icd
oclgrind
oclint
oclock
octa
octave
octave-arduino
octave-control
octave-gsl
octave-instrctl
octave-io
octave-optim
octave-quaternion
octave-signal
octave-splines
octave-statistics
octave-struct
octave-symbolic
octopus octopus: Ensure MPI is used consistently (#33969) 2022-12-16 15:17:37 -08:00
odc odc: add v1.4.5 (#34513) 2022-12-15 10:38:06 -08:00
of-catalyst
of-precice
ome-common-cpp
ome-files-cpp
ome-model
omega-h omegah: new scorec version, fix cuda flags (#34169) 2022-11-28 13:03:27 -08:00
omnitrace
ompss
ompss-2
ompt-openmp
oneapi-igc
oneapi-level-zero
onednn
oniguruma
onnx
ont-guppy
oommf fix typo in path for sanity check (#34117) 2022-11-28 16:49:57 -07:00
op2-dsl
opa-psm2
opam
opari2
open3d
open-iscsi
open-isns
openal-soft
openbabel openbabel: add 3.1.0 and 3.1.1 (#34631) 2022-12-22 03:17:50 -07:00
openblas Fix openblas build with intel compiler (#34432) 2022-12-12 14:27:54 +01:00
opencarp
opencascade
opencl-c-headers
opencl-clhpp
opencl-headers
opencoarrays
opencv
opendatadetector
opendx
openexr
openfast
openfdtd
openfoam openfoam: OneAPI is only supported from 2106 onwards (#34797) 2023-01-09 12:19:23 +01:00
openfoam-org
openfst
opengl
openglu
openimageio
openipmi
openjdk
openjpeg
openkim-models
openldap
openlibm
openloops
openmc
openmm py-alphafold: update to 2.2.4, update dependencies (#33876) 2022-12-02 22:12:06 +00:00
openmolcas
openmpi Add --enable-orterun-prefix-by-default configure option for OpenMPI (#34469) 2022-12-16 17:59:24 -07:00
openmx
opennurbs
openpa
openpbs
openpmd-api
openrasmol
openresty
openscenegraph openscenegraph: add dependency on fontconfig (#34755) 2023-01-02 18:28:28 +01:00
openslide
openslp
openssh
openssl
openstf
opensubdiv
opentsdb
openturns
openvdb
openwsman
ophidia-analytics-framework
ophidia-io-server
ophidia-primitives
ophidia-server
opium
optional-lite
optipng
opus
or-tools
oracle-instant-client
oras
orbit2
orc
orca
orfm
orientdb
orthofiller
orthofinder
orthomcl
osi
osmctools
osmesa
osqp
ossp-uuid
osu-micro-benchmarks osu-micro-benchmarks: add v7.0.1 (#34221) 2022-12-07 21:02:43 +01:00
otf
otf2
ovito
p3dfft3
p4est
p7zip
p11-kit
pacbio-daligner
pacbio-damasker
pacbio-dazz-db
pacbio-dextractor
pacifica-cli
packmol
pacparser
pacvim
pagit
pagmo
pagmo2
pajeng
pal
palisade-development
paml
panda
pandaseq
pandoc
pango
pangolin
pangomm
papi
papyrus
paradiseo
parallel
parallel-netcdf
parallelio
parallelmergetree
paraver
paraview paraview: patch catalyst etc. to build with oneapi (#33562) 2022-12-21 17:07:24 -07:00
parflow
parmetis
parmgridgen
parmmg
parquet-cpp
parquet-format
parsec
parsimonator
parsplice
pasta
pastix
patch
patchelf
patchutils
pathfinder
pax-utils
pbbam
pbmpi
pciutils
pcl
pcma
pcre
pcre2 pcre2: add new versions and update URL (#34477) 2022-12-13 10:48:27 -07:00
pcsclite
pdc
pdf2svg
pdftk
pdsh
pdt
pegtl
pennant
percept
percona-server
perfstubs
perl
perl-acme-damn
perl-algorithm-diff
perl-alien-build
perl-alien-libxml2
perl-alien-svn
perl-app-cmd
perl-appconfig perl-appconfig: add v1.71 (#34685) 2022-12-29 10:55:41 +01:00
perl-archive-zip perl-archive-zip: add 1.68 (#34684) 2022-12-29 10:57:32 +01:00
perl-array-utils
perl-b-hooks-endofscope
perl-bignum
perl-bio-searchio-hmmer
perl-bioperl
perl-bit-vector
perl-cairo
perl-capture-tiny
perl-carp
perl-carp-clan
perl-cgi
perl-class-data-inheritable
perl-class-inspector
perl-class-load
perl-class-load-xs
perl-class-method-modifiers
perl-clone
perl-clone-choose
perl-compress-raw-bzip2
perl-compress-raw-zlib
perl-config-general
perl-config-simple perl-config-simple: add 4.58 (#34649) 2022-12-22 09:43:41 +01:00
perl-contextual-return
perl-cpan-meta-check
perl-data-dumper
perl-data-optlist
perl-data-stag
perl-date-manip
perl-db-file
perl-dbd-mysql
perl-dbd-pg
perl-dbd-sqlite
perl-dbi
perl-devel-cycle
perl-devel-globaldestruction
perl-devel-overloadinfo
perl-devel-stacktrace
perl-devel-symdump
perl-digest-md5
perl-digest-md5-file
perl-dist-checkconflicts
perl-encode-locale
perl-error
perl-eval-closure
perl-exception-class
perl-exporter-lite
perl-exporter-tiny
perl-extutils-config
perl-extutils-depends
perl-extutils-helpers
perl-extutils-installpaths
perl-extutils-makemaker
perl-extutils-pkgconfig
perl-ffi-checklib
perl-file-chdir
perl-file-copy-recursive
perl-file-find-rule
perl-file-grep
perl-file-homedir
perl-file-listing
perl-file-pushd
perl-file-remove
perl-file-sharedir-install
perl-file-slurp
perl-file-slurp-tiny
perl-file-slurper
perl-file-which
perl-font-ttf
perl-forks
perl-fth
perl-gd
perl-gdgraph
perl-gdgraph-histogram
perl-gdtextutil
perl-getopt-tabular
perl-graph
perl-graph-readwrite
perl-hash-merge
perl-html-parser
perl-html-tagset
perl-http-cookies
perl-http-daemon
perl-http-date
perl-http-message
perl-http-negotiate
perl-inline
perl-inline-c
perl-io-all
perl-io-compress
perl-io-html
perl-io-prompt
perl-io-sessiondata
perl-io-socket-ssl
perl-io-string
perl-io-stringy
perl-io-tty
perl-ipc-run
perl-json
perl-libwww-perl
perl-libxml-perl
perl-list-moreutils
perl-list-moreutils-xs
perl-log-log4perl
perl-logger-simple
perl-lwp-mediatypes
perl-lwp-protocol-https
perl-mailtools
perl-math-bezier
perl-math-bigint
perl-math-bigrat
perl-math-cdf
perl-math-cephes
perl-math-matrixreal
perl-math-round
perl-math-vecstat
perl-mce
perl-mni-perllib
perl-module-build
perl-module-build-tiny
perl-module-corelist
perl-module-implementation
perl-module-install
perl-module-runtime
perl-module-runtime-conflicts
perl-module-scandeps
perl-moo
perl-moose
perl-mozilla-ca
perl-mro-compat
perl-namespace-clean
perl-net-http
perl-net-scp-expect
perl-net-ssleay
perl-number-compare
perl-number-format
perl-object-insideout
perl-package-deprecationmanager
perl-package-stash
perl-package-stash-xs
perl-padwalker
perl-parallel-forkmanager
perl-params-util
perl-params-validate
perl-parse-recdescent
perl-path-tiny
perl-pdf-api2
perl-pegex
perl-perl4-corelibs
perl-perl6-slurp
perl-perl-unsafe-signals
perl-perl-version
perl-perlio-gzip
perl-perlio-utf8-strict
perl-readonly
perl-regexp-common
perl-role-tiny
perl-scalar-list-utils
perl-scalar-util-numeric
perl-set-intervaltree
perl-set-intspan
perl-set-scalar
perl-soap-lite
perl-star-fusion
perl-statistics-basic
perl-statistics-descriptive
perl-statistics-pca
perl-sub-exporter
perl-sub-exporter-progressive
perl-sub-identify
perl-sub-install
perl-sub-name
perl-sub-quote
perl-sub-uplevel
perl-svg
perl-swissknife
perl-sys-sigaction
perl-task-weaken
perl-term-readline-gnu
perl-termreadkey
perl-test-cleannamespaces
perl-test-deep
perl-test-differences
perl-test-exception
perl-test-fatal
perl-test-memory-cycle
perl-test-more
perl-test-most
perl-test-needs
perl-test-output
perl-test-requires
perl-test-requiresinternet
perl-test-warn
perl-test-warnings
perl-text-csv
perl-text-diff
perl-text-format
perl-text-glob
perl-text-simpletable
perl-text-soundex
perl-text-unidecode
perl-thread-queue
perl-threads
perl-time-hires
perl-time-piece
perl-timedate
perl-tk
perl-try-tiny
perl-uri
perl-uri-encode
perl-want
perl-www-robotrules
perl-xml-dom
perl-xml-dom-xpath
perl-xml-filter-buffertext
perl-xml-libxml
perl-xml-libxslt
perl-xml-namespacesupport
perl-xml-parser
perl-xml-parser-lite
perl-xml-quote
perl-xml-regexp
perl-xml-sax
perl-xml-sax-base
perl-xml-sax-writer
perl-xml-simple
perl-xml-twig
perl-xml-writer
perl-xml-xpathengine
perl-yaml
perl-yaml-libyaml
perl-yaml-tiny
pestpp
petaca
petsc petsc, py-petsc4py: add v3.18.3 (#34725) 2022-12-30 10:49:21 +01:00
pexsi
pfapack
pfft
pflask
pflogger Update pFunit, add gFTL, gFTL-Shared, fArgParse, pFlogger, yaFyaml (#34476) 2022-12-13 22:40:33 +01:00
pflotran
pfunit Update pFunit, add gFTL, gFTL-Shared, fArgParse, pFlogger, yaFyaml (#34476) 2022-12-13 22:40:33 +01:00
pgdspider
pgi
pgplot pgplot: Correct building shared libraries (#34846) 2023-01-10 11:20:30 +01:00
phantompeakqualtools
pharokka pharokka and py-phanotate: new packages (#34333) 2022-12-05 16:16:59 -06:00
phast
phasta
phist
phoenix
photos
photos-f
php
phrap-crossmatch-swat
phred
phylip
phylobayesmpi
phyluce
picard
picsar
picsarlite
pidx
pig
pigz
pika Fix the version number for the fmt dep of pika package (#34839) 2023-01-06 14:59:23 +01:00
pika-algorithms Add pika-algorithms package and pika 0.11.0 (#34397) 2022-12-09 11:26:48 +01:00
pilercr
pilon
pindel
pinentry
pinfo
pipework
piranha
pism
pixman pixman: new versions 0.42.0, 0.42.2 (#34723) 2023-01-02 18:58:41 +01:00
pixz
pkg-config
pkgconf
pktools
planck-likelihood
plasma
plink
plink-ng
plplot
plumed Added plumed version 2.8.1 including gromacs compatibility (#34268) 2022-12-05 10:43:08 -08:00
ply
pmdk
pmemkv
pmerge
pmgr-collective
pmix Support for building Pmix with Debian/Ubuntu external dependencies (#32690) 2022-12-09 18:30:45 -08:00
pmlib
pnfft
pngquant
pngwriter
pnmpi
poamsa
pocl
podio podio: add v0.16.2 (#34606) 2022-12-21 12:52:47 -07:00
podman podman: New version 4.3.1 (#34817) 2023-01-06 15:06:36 +01:00
poke
polymake
polypolish
poplddecay
poppler
poppler-data
popt
porta
portage
portcullis
ports-of-call
postgis
postgresql
povray
powerapi
powertop
ppl
pplacer
ppopen-appl-amr-fdm
ppopen-appl-bem
ppopen-appl-bem-at
ppopen-appl-dem-util
ppopen-appl-fdm
ppopen-appl-fdm-at
ppopen-appl-fem
ppopen-appl-fvm
ppopen-at
ppopen-math-mp
ppopen-math-vis
prank
precice
predixy
premake-core
presentproto
preseq
presto
price
prime95
primer3
prinseq-lite
printproto
prism
prmon
prng
probconsrna
procenv
process-in-process
procps
procps-ng
prod-util
prodigal
professor
profugusmc
proj
prokka
prometheus
prophecy4f
protobuf
protobuf-c
proxymngr
prrte
pruners-ninja
ps-lite
pscmc
psi4
psimd
pslib
psm
psmc
psrcat psrcat: fixed typo/undefined variable problem (#34334) 2022-12-05 15:19:54 -07:00
psrchive Add packages related to the LWA software stack (#34112) 2022-12-05 09:48:04 -08:00
pstreams
pthreadpool
pugixml
pulseaudio
pumi
pv pv: Add version 1.6.20 (#34854) 2023-01-09 15:07:36 -08:00
pvm
pwgen
pxz
py-3to2
py-4suite-xml
py-a2wsgi adding 2nd bunch of nf-core deps from update/nextflow-tools (#34562) 2022-12-16 15:18:49 -07:00
py-abcpy
py-abipy
py-about-time
py-absl-py
py-accimage
py-acme-tiny
py-adal
py-adb-enhanced
py-addict
py-adios
py-advancedhtmlparser
py-aenum
py-affine
py-agate
py-agate-dbf
py-agate-excel
py-agate-sql
py-ahpy
py-aiobotocore
py-aiocontextvars
py-aiodns
py-aiofiles
py-aiohttp
py-aiohttp-cors
py-aioitertools
py-aioredis
py-aiosignal
py-aiosqlite
py-alabaster
py-alembic
py-alive-progress
py-alphafold py-alphafold: update to 2.2.4, update dependencies (#33876) 2022-12-02 22:12:06 +00:00
py-altair
py-altgraph
py-amqp
py-amrex
py-angel
py-aniso8601
py-anndata
py-annexremote
py-ansi2html
py-ansible
py-antlr4-python3-runtime
py-anuga
py-anyio
py-anytree
py-apache-beam
py-apache-libcloud
py-apex
py-apipkg
py-apispec adding 2nd bunch of nf-core deps from update/nextflow-tools (#34562) 2022-12-16 15:18:49 -07:00
py-appdirs
py-applicationinsights
py-appnope
py-apptools
py-apscheduler
py-arcgis
py-archspec py-archspec: replace removed .build_directory with .stage.source_path (#34521) 2022-12-15 00:00:21 +01:00
py-argcomplete
py-argh
py-argon2-cffi
py-argon2-cffi-bindings
py-args
py-arm-pyart
py-arrow
py-arviz
py-asciitree
py-asdf
py-ase
py-asgiref edits to 8x existing recipes, mostly new versions, plus two dependency fixes (#34516) 2022-12-14 12:28:33 -07:00
py-asn1crypto
py-aspy-yaml
py-asserts
py-asteval
py-astor
py-astpretty
py-astroid
py-astropy New package: py-statmorph (#34158) 2022-11-28 15:46:10 -06:00
py-astropy-healpix
py-astropy-helpers
py-asttokens
py-astunparse
py-async-generator
py-async-lru
py-async-timeout
py-asyncio
py-asynctest
py-atomicwrites
py-atpublic
py-atropos
py-ats
py-attmap Adding first bunch of recipes for dependencies of nf-core-tools (#34537) 2022-12-16 14:28:51 -07:00
py-attrs
py-audioread
py-auditwheel
py-autograd
py-autograd-gamma
py-automat
py-autopep8
py-autoray Adding py-pennylane from Xanadu (#34838) 2023-01-06 16:02:06 -08:00
py-auxlib
py-avro
py-avro-json-serializer
py-avro-python3
py-awesome-slugify
py-awkward
py-awkward0
py-awkward1
py-azote
py-azure-batch
py-azure-cli
py-azure-cli-command-modules-nspkg
py-azure-cli-core
py-azure-cli-nspkg
py-azure-cli-telemetry
py-azure-common
py-azure-core Update packages for running azure (#34403) 2022-12-12 21:10:50 -06:00
py-azure-cosmos
py-azure-datalake-store
py-azure-functions-devops-build
py-azure-graphrbac
py-azure-identity Update packages for running azure (#34403) 2022-12-12 21:10:50 -06:00
py-azure-keyvault
py-azure-keyvault-certificates
py-azure-keyvault-keys
py-azure-keyvault-nspkg
py-azure-keyvault-secrets
py-azure-loganalytics
py-azure-mgmt-advisor
py-azure-mgmt-apimanagement
py-azure-mgmt-appconfiguration
py-azure-mgmt-applicationinsights
py-azure-mgmt-authorization
py-azure-mgmt-batch
py-azure-mgmt-batchai
py-azure-mgmt-billing
py-azure-mgmt-botservice
py-azure-mgmt-cdn
py-azure-mgmt-cognitiveservices
py-azure-mgmt-compute
py-azure-mgmt-consumption
py-azure-mgmt-containerinstance
py-azure-mgmt-containerregistry
py-azure-mgmt-containerservice
py-azure-mgmt-core
py-azure-mgmt-cosmosdb
py-azure-mgmt-datalake-analytics
py-azure-mgmt-datalake-store
py-azure-mgmt-datamigration
py-azure-mgmt-deploymentmanager
py-azure-mgmt-devtestlabs
py-azure-mgmt-dns
py-azure-mgmt-eventgrid
py-azure-mgmt-eventhub
py-azure-mgmt-hdinsight
py-azure-mgmt-imagebuilder
py-azure-mgmt-iotcentral
py-azure-mgmt-iothub
py-azure-mgmt-iothubprovisioningservices
py-azure-mgmt-keyvault
py-azure-mgmt-kusto
py-azure-mgmt-loganalytics
py-azure-mgmt-managedservices
py-azure-mgmt-managementgroups
py-azure-mgmt-maps
py-azure-mgmt-marketplaceordering
py-azure-mgmt-media
py-azure-mgmt-monitor
py-azure-mgmt-msi
py-azure-mgmt-netapp
py-azure-mgmt-network
py-azure-mgmt-nspkg
py-azure-mgmt-policyinsights
py-azure-mgmt-privatedns
py-azure-mgmt-rdbms
py-azure-mgmt-recoveryservices
py-azure-mgmt-recoveryservicesbackup
py-azure-mgmt-redhatopenshift
py-azure-mgmt-redis
py-azure-mgmt-relay
py-azure-mgmt-reservations
py-azure-mgmt-resource
py-azure-mgmt-search
py-azure-mgmt-security
py-azure-mgmt-servicebus
py-azure-mgmt-servicefabric
py-azure-mgmt-signalr
py-azure-mgmt-sql
py-azure-mgmt-sqlvirtualmachine
py-azure-mgmt-storage
py-azure-mgmt-trafficmanager
py-azure-mgmt-web
py-azure-multiapi-storage
py-azure-nspkg
py-azure-storage-blob
py-azure-storage-common
py-azure-storage-nspkg
py-azureml-automl-core
py-azureml-core
py-azureml-dataprep
py-azureml-dataprep-native
py-azureml-dataprep-rslex
py-azureml-dataset-runtime
py-azureml-pipeline
py-azureml-pipeline-core
py-azureml-pipeline-steps
py-azureml-sdk
py-azureml-telemetry
py-azureml-train
py-azureml-train-automl-client
py-azureml-train-core
py-azureml-train-restclients-hyperdrive
py-babel
py-backcall
py-backports-abc
py-backports-cached-property
py-backports-entry-points-selectable
py-backports-lzma
py-backports-os
py-backports-ssl-match-hostname
py-backports-tempfile
py-backports-weakref
py-bagit adding 2nd bunch of nf-core deps from update/nextflow-tools (#34562) 2022-12-16 15:18:49 -07:00
py-bagit-profile adding 2nd bunch of nf-core deps from update/nextflow-tools (#34562) 2022-12-16 15:18:49 -07:00
py-bakta
py-bandit
py-basemap
py-bash-kernel
py-basis-set-exchange
py-batchspawner
py-bayesian-optimization
py-bcbio-gff
py-bcolz
py-bcrypt
py-bdbag adding 2nd bunch of nf-core deps from update/nextflow-tools (#34562) 2022-12-16 15:18:49 -07:00
py-beaker adding 2nd bunch of nf-core deps from update/nextflow-tools (#34562) 2022-12-16 15:18:49 -07:00
py-beancount
py-beautifulsoup4
py-beniget
py-bids-validator
py-bidscoin py-bidscoin, py-multiecho: add new packages (#34168) 2022-11-29 17:37:50 -07:00
py-bidskit py-bidskit: new package and dcm2niix: add 1.0.20220720 (#34162) 2022-11-28 11:05:49 -07:00
py-bigdft
py-bigfloat
py-billiard
py-binaryornot
py-bintrees
py-binwalk
py-bioblend adding 2nd bunch of nf-core deps from update/nextflow-tools (#34562) 2022-12-16 15:18:49 -07:00
py-biom-format
py-biomine
py-biopandas
py-biopython
py-bitarray
py-bitshuffle
py-bitstring
py-black py-black: add v22.12.0 (#34429) 2023-01-09 19:31:47 -06:00
py-bleach
py-blessed
py-blessings
py-blight
py-blinker
py-blis
py-blosc
py-bmap-tools
py-bmtk New neuroscience packages: py-bmtk, py-neurotools (#34464) 2022-12-14 12:00:26 -06:00
py-bokeh
py-boltons
py-boom-boot-manager
py-boost-histogram
py-boto
py-boto3 py-{boto3,botocore,jmespath,s3transfer} bump (#34423) 2022-12-10 09:07:58 -06:00
py-botocore py-{boto3,botocore,jmespath,s3transfer} bump (#34423) 2022-12-10 09:07:58 -06:00
py-botorch
py-bottle
py-bottleneck
py-breakseq2
py-breathe
py-brian
py-brian2
py-brotlipy
py-bsddb3
py-build
py-bx-python
py-cachecontrol
py-cached-property
py-cachetools
py-cachy
py-cairocffi
py-cantoolz
py-carputils
py-cartopy py-cartopy: older versions don't support Python 3.10 (#34626) 2022-12-21 21:23:22 +01:00
py-catalogue
py-catkin-pkg
py-cattrs Adding first bunch of recipes for dependencies of nf-core-tools (#34537) 2022-12-16 14:28:51 -07:00
py-cclib
py-cdo
py-cdsapi
py-cekit
py-celery
py-cerberus
py-certifi
py-certipy
py-cf-units
py-cffconvert
py-cffi
py-cfgrib
py-cfgv
py-cftime
py-cgen
py-chai
py-chainer
py-chainmap
py-chalice
py-chardet
py-charm4py
py-charset-normalizer
py-checkm-genome
py-cheetah3
py-cheroot
py-cherrypy
py-chex
py-chronyk
py-ci-info
py-ci-sdr
py-cinema-lib
py-cinemasci
py-circus adding 2nd bunch of nf-core deps from update/nextflow-tools (#34562) 2022-12-16 15:18:49 -07:00
py-citeproc-py
py-clean-text
py-cleo
py-click
py-click-didyoumean
py-click-plugins
py-click-repl edits to 8x existing recipes, mostly new versions, plus two dependency fixes (#34516) 2022-12-14 12:28:33 -07:00
py-cligj
py-clikit
py-climate
py-clint
py-clipboard
py-cloudauthz adding 2nd bunch of nf-core deps from update/nextflow-tools (#34562) 2022-12-16 15:18:49 -07:00
py-cloudbridge adding 2nd bunch of nf-core deps from update/nextflow-tools (#34562) 2022-12-16 15:18:49 -07:00
py-cloudpickle
py-clustershell
py-cmake
py-cmake-format
py-cmocean
py-cmseq
py-cmsml
py-cmyt Add py-yt 4.x versions (#30418) 2022-11-30 12:03:26 -06:00
py-cnvkit
py-coapthon3
py-codecov
py-codepy
py-coilmq
py-colorama
py-colorcet
py-colorclass
py-colored
py-colored-traceback
py-coloredlogs
py-colorful
py-colorio
py-colorlog
py-colormath
py-colorpy
py-colorspacious
py-colossalai
py-commonmark
py-conan
py-configargparse
py-configobj
py-configparser
py-configspace
py-connectionpool
py-constantly
py-contextily
py-contextlib2
py-contexttimer
py-contourpy
py-control
py-convertdate
py-convokit
py-cookiecutter
py-copulas
py-correctionlib
py-counter
py-cov-core
py-coverage
py-coveralls
py-cppheaderparser
py-cppy
py-crashtest
py-crcmod
py-crossmap
py-cryolobm
py-cryptography
py-cssselect
py-csvkit
py-ctgan
py-cudf
py-cuml
py-cupy
py-current
py-cutadapt
py-cvxopt
py-cvxpy
py-cwl-upgrader adding 2nd bunch of nf-core deps from update/nextflow-tools (#34562) 2022-12-16 15:18:49 -07:00
py-cwl-utils adding 2nd bunch of nf-core deps from update/nextflow-tools (#34562) 2022-12-16 15:18:49 -07:00
py-cwltool adding 2nd bunch of nf-core deps from update/nextflow-tools (#34562) 2022-12-16 15:18:49 -07:00
py-cx-oracle
py-cycler
py-cylp
py-cymem
py-cyordereddict
py-cython
py-cython-bbox
py-cyvcf2
py-d2to1
py-dadi
py-damask
py-darshan dashan-runtime,darshan-util,py-darshan: update package versions for darshan-3.4.2 (#34583) 2022-12-21 20:18:27 +01:00
py-dask
py-dask-glm
py-dask-ml
py-dask-sphinx-theme
py-dataclasses Bootstrap most of Spack dependencies using environments (#34029) 2022-12-06 11:54:02 +01:00
py-datacube
py-datalad
py-datalad-container
py-datalad-hirni
py-datalad-metadata-model
py-datalad-metalad
py-datalad-neuroimaging
py-datalad-webapp
py-datasets
py-dateparser
py-datrie
py-dbf
py-dbfread
py-dcm2bids py-dcm2bids: add new package (#34163) 2022-11-28 10:46:04 -07:00
py-deap
py-debtcollector
py-debugpy
py-decorator
py-deepdiff
py-deepecho
py-deephyper
py-deepsig
py-deepsig-biocomp
py-deeptools
py-deeptoolsintervals
py-defusedxml
py-demjson
py-dendropy
py-deprecated
py-deprecation
py-descartes
py-devito
py-devlib
py-dgl
py-dh-scikit-optimize
py-dictdiffer
py-dictobj adding 2nd bunch of nf-core deps from update/nextflow-tools (#34562) 2022-12-16 15:18:49 -07:00
py-dill Patch dill._dill._is_builtin_module (#34534) 2022-12-14 16:03:03 -07:00
py-dipy
py-discover
py-diskcache
py-distance
py-distlib
py-distributed
py-distro
py-django
py-dlcpar
py-dm-haiku py-alphafold: update to 2.2.4, update dependencies (#33876) 2022-12-02 22:12:06 +00:00
py-dm-tree
py-dnaio
py-dnspython adding 3rd bunch of nf-core deps from update/nextflow-tools (#34563) 2023-01-08 20:06:59 -08:00
py-docker
py-dockerpy-creds
py-docopt
py-docstring-to-markdown Add py-docstring-to-markdown v0.11 (#34595) 2022-12-18 14:59:47 -06:00
py-docutils
py-docutils-stubs
py-dominate
py-dotnetcore2
py-downhill
py-doxypypy
py-dpath
py-drep py-instrain and py-drep: new version and added maintainer (#34581) 2023-01-06 13:26:19 -06:00
py-drmaa
py-dryscrape
py-duecredit
py-dulwich
py-dunamai
py-dvc
py-dxchange
py-dxfile
py-dynim added py-dynim package (#34651) 2022-12-22 09:55:18 -06:00
py-earthengine-api
py-easybuild-easyblocks
py-easybuild-easyconfigs
py-easybuild-framework
py-eccodes
py-ecdsa
py-ecos
py-edam-ontology adding 3rd bunch of nf-core deps from update/nextflow-tools (#34563) 2023-01-08 20:06:59 -08:00
py-edffile
py-editables
py-editdistance
py-edlib
py-efficientnet-pytorch
py-eg
py-einops
py-elasticsearch
py-elephant
py-emcee
py-emoji
py-empy
py-entrypoints
py-envisage
py-ephem
py-epydoc
py-espresso
py-espressopp
py-et-xmlfile
py-etelemetry
py-etils py-alphafold: update to 2.2.4, update dependencies (#33876) 2022-12-02 22:12:06 +00:00
py-eventlet
py-exceptiongroup Adding first bunch of recipes for dependencies of nf-core-tools (#34537) 2022-12-16 14:28:51 -07:00
py-execnet
py-executing
py-exhale
py-exifread
py-exodus-bundler
py-extension-helpers
py-extras
py-ez-setup
py-f90nml
py-f90wrap
py-fabric
py-faker
py-falcon
py-fallocate
py-fastai
py-fastaindex
py-fastapi adding 3rd bunch of nf-core deps from update/nextflow-tools (#34563) 2023-01-08 20:06:59 -08:00
py-fastapi-utils adding 3rd bunch of nf-core deps from update/nextflow-tools (#34563) 2023-01-08 20:06:59 -08:00
py-fastavro
py-fastcache
py-fastcluster
py-fastcore
py-fastcov
py-fastdownload
py-fastdtw
py-fasteners
py-fastjsonschema
py-fastpath
py-fastprogress
py-fastrlock
py-faststructure
py-fava
py-fenics-basix
py-fenics-dijitso
py-fenics-dolfinx
py-fenics-ffc
py-fenics-ffcx
py-fenics-fiat
py-fenics-instant
py-fenics-ufl
py-file-magic add_new_package: py-file-magic (#34486) 2023-01-04 11:08:58 -06:00
py-filelock
py-filemagic
py-filetype Adding first bunch of recipes for dependencies of nf-core-tools (#34537) 2022-12-16 14:28:51 -07:00
py-filterpy
py-findlibs
py-fiona
py-fire
py-fiscalyear
py-fisher py-fisher: add version 0.1.10 (#34738) 2022-12-31 12:48:21 -06:00
py-fits-tools
py-fitter
py-fixtures
py-flake8
py-flake8-import-order
py-flake8-polyfill
py-flameprof
py-flask py-flask: add 2.2.2 and fix dependencies for py-werkzeug and py-markupsafe (#32849) 2022-12-01 22:56:18 -07:00
py-flask-babel
py-flask-compress
py-flask-cors
py-flask-restful
py-flask-socketio
py-flatbuffers
py-flatten-dict
py-flawfinder
py-flexmock
py-flexx
py-flit
py-flit-core
py-flit-scm Adding first bunch of recipes for dependencies of nf-core-tools (#34537) 2022-12-16 14:28:51 -07:00
py-flufl-lock
py-flye
py-fn-py
py-fonttools
py-ford
py-formatizer
py-formulaic
py-fortran-language-server
py-fortranformat
py-fparser
py-fprettify
py-fracridge
py-freezegun
py-frozendict py-pyld: add with dependency (#34472) 2022-12-12 20:15:43 -07:00
py-frozenlist
py-fs
py-fsspec
py-ftfy
py-ftputil Add new version of snakemake (#34041) 2022-11-28 15:10:10 -07:00
py-funcy
py-fury
py-fusepy
py-future
py-fuzzywuzzy
py-fypp
py-galaxy-sequence-utils adding 3rd bunch of nf-core deps from update/nextflow-tools (#34563) 2023-01-08 20:06:59 -08:00
py-gast
py-gcovr
py-gcs-oauth2-boto-plugin
py-gdbgui
py-gdc-client
py-gee-asset-manager
py-geeadd
py-geeup
py-genders
py-geneimpacts
py-genshi
py-gensim
py-geoalchemy2
py-geocube
py-geographiclib
py-geopandas
py-geoplot
py-geopy
py-getorganelle
py-gevent
py-gf256
py-gffutils
py-ghp-import
py-gimmik
py-gin-config
py-git-review
py-gitdb
py-gitpython
py-glmnet
py-glmsingle
py-glob2
py-globus-sdk
py-gluoncv
py-glymur
py-gnuplot
py-goatools
py-gooey
py-google
py-google-api-core
py-google-api-python-client
py-google-apitools
py-google-auth
py-google-auth-httplib2
py-google-auth-oauthlib
py-google-cloud-core
py-google-cloud-storage
py-google-crc32c
py-google-pasta
py-google-resumable-media
py-googleapis-common-protos
py-googledrivedownloader
py-gosam
py-gpaw
py-gpustat
py-gputil
py-gpy
py-gpyopt
py-gpytorch
py-gql
py-grandalf
py-grapheme
py-graphlib-backport
py-graphql-core
py-graphviz
py-gravity adding 3rd bunch of nf-core deps from update/nextflow-tools (#34563) 2023-01-08 20:06:59 -08:00
py-greenlet
py-grequests
py-griddataformats
py-griffe
py-grpcio
py-grpcio-tools
py-gsd
py-gsutil
py-gtdbtk
py-guidata
py-guiqwt
py-gunicorn adding 3rd bunch of nf-core deps from update/nextflow-tools (#34563) 2023-01-08 20:06:59 -08:00
py-gxformat2 adding 3rd bunch of nf-core deps from update/nextflow-tools (#34563) 2023-01-08 20:06:59 -08:00
py-gym
py-h2
py-h5glance
py-h5io py-mne: add 1.2.2, 1.2.3 and dependency packages (#34295) 2022-12-05 00:02:27 -06:00
py-h5netcdf
py-h5py
py-h5sh
py-h11
py-hacking
py-haphpipe
py-hatch-fancy-pypi-readme
py-hatch-nodejs-version py-nbformat: add 5.7.0 and new package py-hatch-nodejs-version (#34361) 2022-12-09 12:32:41 -06:00
py-hatch-vcs
py-hatchet
py-hatchling Add checksum for py-hatchling 1.8.1 (#34260) 2022-12-02 09:29:38 -06:00
py-hclust2
py-hdbscan
py-hdfs
py-healpy
py-heapdict
py-hep-ml
py-hepdata-converter
py-hepdata-lib
py-hepdata-validator
py-hepunits
py-hieroglyph
py-hiredis
py-hist
py-histbook
py-histogrammar
py-histoprint
py-holland-backup
py-horovod py-horovod: patch no longer applies (#34593) 2022-12-19 11:49:02 +01:00
py-hpack
py-hpbandster
py-hpccm
py-hstspreload
py-html2text
py-html5lib
py-htmlgen
py-htseq
py-httpbin
py-httpcore
py-httplib2
py-httpretty
py-httpstan
py-httptools
py-httpx
py-huggingface-hub
py-humanfriendly
py-humanize
py-hvac
py-hypercorn
py-hyperframe
py-hyperlink
py-hyperopt
py-hypothesis
py-ibm-cloud-sdk-core
py-ibm-watson
py-ics
py-identify
py-idna
py-idna-ssl
py-illumina-utils
py-ilmbase
py-imagecodecs
py-imageio
py-imageio-ffmpeg
py-imagesize
py-imgaug
py-iminuit
py-immutabledict
py-immutables
py-importlib-metadata
py-importlib-resources
py-incremental
py-inference-schema
py-inheritance
py-iniconfig
py-iniparse
py-installer
py-instrain py-instrain and py-drep: new version and added maintainer (#34581) 2023-01-06 13:26:19 -06:00
py-intbitset
py-intel-openmp
py-intensity-normalization
py-interface-meta
py-intervaltree
py-invoke
py-iocapture
py-ipaddress
py-ipdb
py-ipycanvas
py-ipyevents
py-ipykernel
py-ipympl
py-ipyparallel
py-ipython
py-ipython-cluster-helper
py-ipython-genutils
py-ipyvtk-simple
py-ipywidgets
py-irpf90
py-isa-rwval adding 3rd bunch of nf-core deps from update/nextflow-tools (#34563) 2023-01-08 20:06:59 -08:00
py-isal
py-iso8601
py-isodate
py-isort
py-itk
py-itsdangerous
py-jaconv
py-jamo
py-jaraco-classes
py-jaraco-functools
py-javaproperties
py-jax py-alphafold: update to 2.2.4, update dependencies (#33876) 2022-12-02 22:12:06 +00:00
py-jaxlib py-alphafold: update to 2.2.4, update dependencies (#33876) 2022-12-02 22:12:06 +00:00
py-jdatetime
py-jdcal
py-jedi
py-jeepney
py-jellyfish
py-jinja2
py-jinja2-time
py-jmespath py-{boto3,botocore,jmespath,s3transfer} bump (#34423) 2022-12-10 09:07:58 -06:00
py-jmp
py-joblib
py-jplephem
py-jprops
py-jpype1
py-jsmin Update packages (#34344) 2022-12-05 23:52:05 -06:00
py-json5
py-json-get
py-jsondiff
py-jsonpatch
py-jsonpath-ng
py-jsonpickle
py-jsonpointer
py-jsonref
py-jsonschema
py-junit-xml
py-jupyter
py-jupyter-client
py-jupyter-console
py-jupyter-core py-nbclient: add 0.7.2 and py-jupyter-core: add 5.1.0 (#34348) 2022-12-06 10:43:28 -07:00
py-jupyter-packaging
py-jupyter-packaging7
py-jupyter-packaging11 Add checksum for py-packaging11 0.12.3 (#34402) 2022-12-09 06:43:44 -07:00
py-jupyter-server
py-jupyter-server-mathjax
py-jupyter-telemetry
py-jupyterhub
py-jupyterlab
py-jupyterlab-pygments
py-jupyterlab-server
py-jupyterlab-widgets
py-jupytext
py-kaggle
py-kaldiio
py-kb-python new package: py-kb-python + dependencies (#34737) 2023-01-03 16:35:43 -06:00
py-keras
py-keras2onnx
py-keras-applications
py-keras-preprocessing
py-kerberos
py-keyboard
py-keyring
py-keyrings-alt py-keyrings-alt: add 4.2.0 (#34262) 2022-12-02 09:08:53 -07:00
py-keystoneauth1
py-kitchen
py-kiwisolver Add checksum for py-kiwisolver 1.4.4 (#34121) 2022-11-30 09:18:18 -06:00
py-kmodes
py-knack
py-kombu
py-kornia py-kornia: add v0.6.9 (#34652) 2022-12-22 15:13:52 -07:00
py-kosh
py-kt-legacy
py-kubernetes
py-labours
py-lagom adding 3rd bunch of nf-core deps from update/nextflow-tools (#34563) 2023-01-08 20:06:59 -08:00
py-lap
py-lark
py-lark-parser
py-laspy
py-latexcodec
py-law
py-lazy
py-lazy-object-proxy
py-lazy-property
py-lazyarray
py-leather
py-lerc
py-lhsmdu
py-liac-arff
py-libclang
py-libconf
py-libensemble
py-liblas
py-librosa
py-lifelines
py-lightgbm
py-lightning-lite
py-lightning-utilities
py-ligo-segments
py-line-profiler
py-linear-operator
py-linecache2
py-lineenhancer
py-lit
py-lizard
py-llnl-sina
py-llvmlite py-llvmlite: add 0.39.1 (#34318) 2022-12-05 09:22:05 -06:00
py-lmdb
py-lmfit
py-lmodule
py-localcider
py-locket
py-lockfile
py-logilab-common
py-logmuse Adding first bunch of recipes for dependencies of nf-core-tools (#34537) 2022-12-16 14:28:51 -07:00
py-loguru
py-loompy new package: py-kb-python + dependencies (#34737) 2023-01-03 16:35:43 -06:00
py-looseversion py-nipype: add 1.8.5 and py-looseversion: add new package (#34608) 2022-12-19 13:25:22 -06:00
py-louie
py-lru-dict
py-lscsoft-glue
py-luigi
py-lws
py-lxml
py-lz4
py-lzstring
py-m2r
py-macholib
py-machotools
py-macs2
py-maestrowf
py-magic
py-mailchecker
py-make
py-mako
py-mapbox-earcut Add py-svgpath and py-trimesh (#34471) 2023-01-04 11:00:00 -06:00
py-mapclassify
py-markdown
py-markdown2
py-markdown-include
py-markdown-it-py
py-markovify
py-markupsafe py-flask: add 2.2.2 and fix dependencies for py-werkzeug and py-markupsafe (#32849) 2022-12-01 22:56:18 -07:00
py-marshmallow
py-matplotlib
py-matplotlib-inline Add checksum for py-traitlets 5.3.0 (#34127) 2022-11-28 11:05:35 -07:00
py-mayavi
py-mccabe
py-md-environ
py-mdanalysis
py-mdit-py-plugins
py-mechanize
py-medaka
py-meldmd
py-memory-profiler
py-memprof
py-memray
py-mercantile
py-mergedeep
py-merlin
py-meshio
py-meson-python Update py-meson-python (0.11.0, 0.12.0) and meson (0.64.1, 1.0.0) (#34675) 2022-12-23 19:22:19 -07:00
py-metaphlan
py-metasv
py-metpy
py-mffpy
py-mg-rast-tools
py-mido
py-mikado
py-minio
py-minrpc
py-misopy
py-mistune
py-mizani
py-mkdocs
py-mkdocs-autorefs
py-mkdocs-jupyter
py-mkdocs-material
py-mkdocs-material-extensions
py-mkdocstrings
py-mkdocstrings-python
py-ml-collections
py-mlperf-logging
py-mlxtend
py-mmcv
py-mmtf-python
py-mne py-mne: add 1.2.2, 1.2.3 and dependency packages (#34295) 2022-12-05 00:02:27 -06:00
py-mo-pack
py-mock
py-modin
py-modred
py-moltemplate
py-monotonic
py-monty
py-more-itertools
py-motmetrics
py-motor
py-mouseinfo
py-moviepy
py-mpi4py
py-mpld3
py-mplhep
py-mplhep-data
py-mpmath
py-mrcfile
py-msal Update packages for running azure (#34403) 2022-12-12 21:10:50 -06:00
py-msal-extensions Update packages for running azure (#34403) 2022-12-12 21:10:50 -06:00
py-msgpack
py-msgpack-numpy
py-msrest
py-msrestazure
py-multi-key-dict
py-multidict
py-multiecho py-bidscoin, py-multiecho: add new packages (#34168) 2022-11-29 17:37:50 -07:00
py-multipledispatch
py-multiprocess
py-multiqc
py-munch
py-murmurhash
py-mutagen
py-mx
py-mxfold2
py-myhdl
py-mypy
py-mypy-extensions
py-mysql-connector-python
py-mysqlclient
py-mysqldb1
py-myst-parser
py-nanotime
py-nara-wpe
py-natsort
py-nbclassic py-nbclassic: add 0.4.8 and new package py-notebook-shim (#34320) 2022-12-05 09:51:28 -07:00
py-nbclient py-nbclient: add 0.7.2 and py-jupyter-core: add 5.1.0 (#34348) 2022-12-06 10:43:28 -07:00
py-nbconvert
py-nbdime
py-nbformat py-nbformat: add 5.7.0 and new package py-hatch-nodejs-version (#34361) 2022-12-09 12:32:41 -06:00
py-nbmake
py-nbsphinx
py-nbval
py-nc-time-axis
py-ncbi-genome-download
py-ndg-httpsclient
py-neo
py-neobolt
py-neotime
py-neovim-remote
py-nest-asyncio
py-nestle
py-netaddr
py-netcdf4
py-netifaces
py-netket
py-networkit
py-networkx edits to 8x existing recipes, mostly new versions, plus two dependency fixes (#34516) 2022-12-14 12:28:33 -07:00
py-neurokit2 py-neurokit2: add 0.2.2 (#34267) 2022-12-02 11:41:43 -07:00
py-neurolab
py-neurora
py-neurotools New neuroscience packages: py-bmtk, py-neurotools (#34464) 2022-12-14 12:00:26 -06:00
py-ngs-tools new package: py-kb-python + dependencies (#34737) 2023-01-03 16:35:43 -06:00
py-nibabel
py-nibetaseries
py-nilearn py-nilearn: fix dependency version (#34284) 2022-12-02 15:04:46 -07:00
py-ninja
py-nipype py-nipype: add 1.8.5 and py-looseversion: add new package (#34608) 2022-12-19 13:25:22 -06:00
py-nistats
py-nitransforms
py-niworkflows
py-nltk
py-node-semver
py-nodeenv py-nodeenv: add 1.7.0 (#34314) 2022-12-05 12:32:30 -07:00
py-nose
py-nose2
py-nose-cov
py-nosexcover
py-notebook
py-notebook-shim py-nbclassic: add 0.4.8 and new package py-notebook-shim (#34320) 2022-12-05 09:51:28 -07:00
py-npx
py-ntlm-auth
py-ntplib
py-num2words py-num2words: add 0.5.12 (#34315) 2022-12-05 12:25:01 -07:00
py-numba py-numba: add 0.56.4 (#34362) 2022-12-07 14:18:45 -07:00
py-numcodecs
py-numexpr
py-numexpr3
py-numpy py-numpy: add v1.24.1 (#34697) 2022-12-29 10:23:20 +01:00
py-numpy-groupies new package: py-kb-python + dependencies (#34737) 2023-01-03 16:35:43 -06:00
py-numpy-quaternion
py-numpydoc
py-nvidia-ml-py
py-nvidia-ml-py3
py-oauth2client
py-oauthlib
py-ocp-models
py-odc-geo
py-olefile
py-omegaconf
py-onnx
py-onnx-runtime Fix recipe for py-onnx-runtime (#34130) 2022-11-30 09:17:22 -06:00
py-onnxconverter-common
py-onnxmltools Add checksum for py-onnxmltools 1.11.1 (#34400) 2022-12-09 04:04:20 -07:00
py-ont-fast5-api
py-opcodes
py-opencensus
py-opencensus-context
py-openidc-client
py-openmc
py-openpmd-validator
py-openpmd-viewer
py-openpyxl
py-openslide-python
py-opentuner
py-opppy
py-opt-einsum
py-or-tools
py-ordered-set
py-os-service-types
py-oset
py-oslo-config
py-oslo-i18n
py-oslo-serialization
py-oslo-utils
py-osqp
py-overpy
py-owslib
py-oyaml Adding first bunch of recipes for dependencies of nf-core-tools (#34537) 2022-12-16 14:28:51 -07:00
py-pacifica-downloader
py-pacifica-namespace
py-pacifica-uploader
py-packaging
py-pager
py-palettable
py-pamela
py-panaroo
py-pandas
py-pandocfilters
py-param
py-parameterized
py-paramiko edits to 8x existing recipes, mostly new versions, plus two dependency fixes (#34516) 2022-12-14 12:28:33 -07:00
py-paramz
py-parasail
py-parmed
py-parse
py-parsedatetime
py-parsimonious
py-parsl
py-parsley adding 3rd bunch of nf-core deps from update/nextflow-tools (#34563) 2023-01-08 20:06:59 -08:00
py-parso
py-partd
py-particle
py-paste adding 3rd bunch of nf-core deps from update/nextflow-tools (#34563) 2023-01-08 20:06:59 -08:00
py-pastedeploy adding 3rd bunch of nf-core deps from update/nextflow-tools (#34563) 2023-01-08 20:06:59 -08:00
py-pastel
py-patch-ng
py-path-py
py-pathlib2
py-pathml
py-pathos
py-pathspec
py-pathtools
py-patool
py-patsy
py-pauvre
py-pbr
py-pdbfixer
py-pdm-pep517
py-pdoc3
py-peachpy
py-pebble adding 3rd bunch of nf-core deps from update/nextflow-tools (#34563) 2023-01-08 20:06:59 -08:00
py-pem
py-pennylane Adding py-pennylane from Xanadu (#34838) 2023-01-06 16:02:06 -08:00
py-pennylane-lightning Adding py-pennylane from Xanadu (#34838) 2023-01-06 16:02:06 -08:00
py-pep8
py-pep8-naming
py-pep517
py-performance
py-periodictable
py-petastorm
py-petname
py-petsc4py petsc, py-petsc4py: add v3.18.3 (#34725) 2022-12-30 10:49:21 +01:00
py-pexpect
py-phanotate pharokka and py-phanotate: new packages (#34333) 2022-12-05 16:16:59 -06:00
py-phonenumbers
py-phonopy
py-photutils New package: py-statmorph (#34158) 2022-11-28 15:46:10 -06:00
py-phydms
py-phylophlan
py-pickle5
py-pickleshare
py-picmistandard WarpX 22.11, 22.12 & PICMI-Standard (#34517) 2022-12-14 13:59:16 -08:00
py-picrust2
py-pid
py-pika
py-pillow
py-pillow-simd
py-pint
py-pip Add back depends_on directives needed to bootstrap on Python 3.6 (#34355) 2022-12-06 20:08:26 +01:00
py-piper Adding first bunch of recipes for dependencies of nf-core-tools (#34537) 2022-12-16 14:28:51 -07:00
py-pipits
py-pispino
py-pkgconfig
py-pkginfo
py-pkgutil-resolve-name
py-plac
py-planar
py-planet
py-platformdirs Bootstrap most of Spack dependencies using environments (#34029) 2022-12-06 11:54:02 +01:00
py-plotly
py-plotnine
py-pluggy
py-ply
py-pmw
py-pmw-patched
py-pockets
py-poetry
py-poetry-core
py-poetry-dynamic-versioning
py-poetry-plugin-export
py-pomegranate
py-pooch
py-portalocker
py-portend
py-poster
py-pot
py-pox
py-poyo
py-ppft
py-pprintpp
py-pre-commit
py-preshed
py-pretrainedmodels
py-prettytable
py-priority
py-profilehooks
py-proglog
py-progress
py-progressbar2
py-progressbar33
py-projectq
py-prometheus-client Add checksum for py-prometheus-client 0.14.1 (#34259) 2022-12-12 13:32:02 +01:00
py-promise
py-prompt-toolkit
py-protobuf
py-prov edits to 8x existing recipes, mostly new versions, plus two dependency fixes (#34516) 2022-12-14 12:28:33 -07:00
py-prwlock
py-psij-python add py-psij-python and py-pystache packages (#34357) 2022-12-21 20:07:35 -07:00
py-pspamm
py-psutil
py-psyclone
py-psycopg2
py-ptyprocess
py-pudb
py-pulp
py-pure-eval
py-pure-sasl
py-py
py-py2bit
py-py2neo
py-py4j
py-py6s
py-py-cpuinfo
py-py-spy
py-pyaestro
py-pyamg
py-pyaml
py-pyani
py-pyarrow
py-pyasn1
py-pyasn1-modules
py-pyassimp
py-pyautogui
py-pybedtools
py-pybids
py-pybigwig
py-pybind11 mercurial/py-pybind11: print_string no longer exists (#34340) 2022-12-06 09:28:00 -08:00
py-pybind11-stubgen
py-pybobyqa
py-pybrain
py-pybtex
py-pybtex-docutils
py-pycairo
py-pycares
py-pycbc
py-pychecker
py-pycifrw
py-pycmd
py-pycocotools
py-pycodestyle
py-pycollada Add py-svgpath and py-trimesh (#34471) 2023-01-04 11:00:00 -06:00
py-pycompadre
py-pycortex
py-pycosat
py-pycparser
py-pycrypto
py-pyct
py-pycuda
py-pycurl
py-pydantic
py-pydantic-tes adding 3rd bunch of nf-core deps from update/nextflow-tools (#34563) 2023-01-08 20:06:59 -08:00
py-pydap
py-pydatalog
py-pydeprecate
py-pydeps
py-pydicom
py-pydispatcher
py-pydmd
py-pydocstyle py-pydocstyle: add v6.2 (#34785) 2023-01-10 13:17:00 +01:00
py-pydoe
py-pydoe2
py-pydot
py-pydot2
py-pydotplus
py-pydv
py-pyeda
py-pyelftools
py-pyem
py-pyepsg
py-pyerfa New package: py-statmorph (#34158) 2022-11-28 15:46:10 -06:00
py-pyeventsystem adding 2nd bunch of nf-core deps from update/nextflow-tools (#34562) 2022-12-16 15:18:49 -07:00
py-pyface
py-pyfaidx
py-pyfasta
py-pyfftw
py-pyfiglet
py-pyfits
py-pyflakes
py-pyfr
py-pygdal
py-pygdbmi
py-pygelf
py-pygeos
py-pygetwindow
py-pygit2
py-pygithub
py-pyglet
py-pygments
py-pygments-pytest
py-pygobject
py-pygps
py-pygpu
py-pygraphviz
py-pygresql
py-pygtrie
py-pyh5md
py-pyheadtail
py-pyinstrument
py-pyinstrument-cext
py-pyjnius
py-pyjwt
py-pyke
py-pykml
py-pykokkos-base
py-pykwalify
py-pylab-sdk
py-pylatex
py-pyld py-pyld: add with dependency (#34472) 2022-12-12 20:15:43 -07:00
py-pylev
py-pyliblzma
py-pylikwid
py-pylint
py-pylops
py-pymatgen
py-pymatreader py-mne: add 1.2.2, 1.2.3 and dependency packages (#34295) 2022-12-05 00:02:27 -06:00
py-pymc3
py-pymdown-extensions
py-pymeeus
py-pyminifier
py-pymol
py-pymongo
py-pymoo
py-pymorph
py-pympler
py-pymsgbox
py-pymumps
py-pymysql
py-pynacl
py-pynio
py-pynisher
py-pynn
py-pynndescent
py-pynvim
py-pynvml
py-pyodbc
py-pyomo
py-pyopencl
py-pyopenssl
py-pypar
py-pyparsing
py-pypdf2
py-pypeflow
py-pypeg2
py-pyperclip
py-pyperf
py-pypinyin
py-pyprecice
py-pyprof2html
py-pyproj py-pyproj: add new versions (#34633) 2022-12-21 20:00:53 +01:00
py-pyproject-metadata
py-pypulse
py-pyqi
py-pyqt4
py-pyqt5
py-pyqt5-sip
py-pyqt-builder
py-pyquaternion
py-pyrect
py-pyrevolve
py-pyrfr
py-pyro4
py-pyro-api
py-pyro-ppl
py-pyrosar
py-pyrr
py-pyrsistent
py-pysam
py-pyscaf
py-pyscf
py-pyscipopt
py-pyscreeze
py-pyserial
py-pyshp
py-pyside
py-pyside2
py-pysimdjson
py-pysmartdl
py-pysocks
py-pysolar
py-pyspark
py-pyspellchecker
py-pyspoa
py-pysqlite3
py-pystac
py-pystache add py-psij-python and py-pystache packages (#34357) 2022-12-21 20:07:35 -07:00
py-pystan
py-pysurfer
py-pytailf
py-pytaridx
py-pytecplot
py-pytesseract
py-pytest
py-pytest-arraydiff
py-pytest-asyncio
py-pytest-benchmark
py-pytest-cache
py-pytest-check-links
py-pytest-cov
py-pytest-cpp
py-pytest-datadir py-pytest-datadir: Init at 1.4.1 (#34692) 2022-12-24 11:42:05 -07:00
py-pytest-doctestplus
py-pytest-fail-slow
py-pytest-flake8
py-pytest-flakes
py-pytest-forked
py-pytest-html
py-pytest-httpbin
py-pytest-isort
py-pytest-metadata
py-pytest-mock
py-pytest-mypy
py-pytest-openfiles
py-pytest-parallel
py-pytest-pep8
py-pytest-qt
py-pytest-random-order
py-pytest-runner
py-pytest-timeout
py-pytest-workflow Adding first bunch of recipes for dependencies of nf-core-tools (#34537) 2022-12-16 14:28:51 -07:00
py-pytest-xdist
py-python3-xlib
py-python-benedict
py-python-bioformats
py-python-box
py-python-certifi-win32
py-python-constraint
py-python-crfsuite
py-python-daemon
py-python-dateutil
py-python-docs-theme
py-python-dotenv
py-python-editor
py-python-engineio
py-python-fmask
py-python-fsutil
py-python-gitlab
py-python-igraph
py-python-javabridge
py-python-jenkins
py-python-json-logger
py-python-keystoneclient
py-python-ldap
py-python-levenshtein
py-python-logstash
py-python-louvain
py-python-lsp-jsonrpc Add py-python-lsp-server and dependencies (#34149) 2022-12-01 09:34:49 -07:00
py-python-lsp-server Add py-python-lsp-server and dependencies (#34149) 2022-12-01 09:34:49 -07:00
py-python-lzo
py-python-magic
py-python-mapnik
py-python-markdown-math
py-python-memcached
py-python-oauth2
py-python-picard
py-python-rapidjson
py-python-slugify
py-python-socketio
py-python-subunit
py-python-swiftclient
py-python-utils
py-python-xlib
py-python-xmp-toolkit
py-pythonqwt
py-pythonsollya
py-pythran py-scipy: add v1.10.0 (#34799) 2023-01-10 11:43:55 +01:00
py-pytimeparse
py-pytoml
py-pytools
py-pytorch-gradual-warmup-lr
py-pytorch-lightning py-pytorch-lightning: add v1.8.6 (#34647) 2022-12-22 09:43:57 +01:00
py-pytorch-sphinx-theme
py-pyts
py-pytweening
py-pytz
py-pyudev
py-pyugrid
py-pyupgrade
py-pyusb
py-pyutilib
py-pyvcf
py-pyvista py-pyvista: add v0.37.0 (#34590) 2022-12-19 11:48:01 +01:00
py-pyvistaqt
py-pyvolve
py-pywavelets py-pywavelets: add 1.4.1 (#34369) 2022-12-07 13:40:10 -07:00
py-pywcs
py-pyworld
py-pyyaml
py-pyyaml-env-tag
py-pyzmq
py-qiskit-aer
py-qiskit-nature
py-qiskit-terra
py-qmtest
py-qpth
py-qrcode
py-qsymm
py-qtawesome
py-qtconsole
py-qtpy
py-quantities
py-quart
py-quast
py-quaternionic
py-qudida
py-queryablelist
py-questionary edits to 8x existing recipes, mostly new versions, plus two dependency fixes (#34516) 2022-12-14 12:28:33 -07:00
py-qutip Adding recipes for py-qutip and py-qutip-qip (#34835) 2023-01-06 17:22:03 -08:00
py-qutip-qip Adding recipes for py-qutip and py-qutip-qip (#34835) 2023-01-06 17:22:03 -08:00
py-radiant-mlhub
py-radical-entk Update package versions: RADICAL-Cybertools (RE, RG, RP, RS, RU) (#34572) 2022-12-16 22:24:00 -07:00
py-radical-gtod Update package versions: RADICAL-Cybertools (RE, RG, RP, RS, RU) (#34572) 2022-12-16 22:24:00 -07:00
py-radical-pilot Update package versions: RADICAL-Cybertools (RE, RG, RP, RS, RU) (#34572) 2022-12-16 22:24:00 -07:00
py-radical-saga Update package versions: RADICAL-Cybertools (RE, RG, RP, RS, RU) (#34572) 2022-12-16 22:24:00 -07:00
py-radical-utils Update package versions: RADICAL-Cybertools (RE, RG, RP, RS, RU) (#34572) 2022-12-16 22:24:00 -07:00
py-ranger-fm
py-rapidfuzz
py-rarfile
py-rasterio
py-rasterstats
py-ratelim
py-ratelimiter
py-raven
py-ray
py-rbtools
py-rdflib py-rdflib: add 6.2.0 (#34394) 2022-12-08 13:07:26 -06:00
py-rdflib-jsonld adding 2nd bunch of nf-core deps from update/nextflow-tools (#34562) 2022-12-16 15:18:49 -07:00
py-rdt
py-readme-renderer py-twine: add 4.0.1, py-readme-renderer: add 37.3 (#34203) 2022-12-01 12:29:10 -06:00
py-recommonmark
py-redis
py-refgenconf Adding first bunch of recipes for dependencies of nf-core-tools (#34537) 2022-12-16 14:28:51 -07:00
py-refgenie Adding first bunch of recipes for dependencies of nf-core-tools (#34537) 2022-12-16 14:28:51 -07:00
py-regex
py-reindent
py-reportlab py-reportlab: add 3.6.12 (#34396) 2022-12-08 20:08:00 -06:00
py-repoze-lru
py-reproject
py-requests
py-requests-cache Adding first bunch of recipes for dependencies of nf-core-tools (#34537) 2022-12-16 14:28:51 -07:00
py-requests-ftp
py-requests-futures
py-requests-mock
py-requests-ntlm
py-requests-oauthlib
py-requests-toolbelt
py-requests-unixsocket
py-reretry Add new version of snakemake (#34041) 2022-11-28 15:10:10 -07:00
py-resampy
py-responses
py-resultsfile
py-retry
py-retry-decorator
py-retrying
py-retworkx
py-rfc3986
py-rich
py-rich-click
py-rios
py-rioxarray
py-rise
py-river
py-rmm
py-rnc2rng
py-robotframework
py-rope
py-rosdep
py-rosdistro
py-rosinstall
py-rosinstall-generator
py-rospkg
py-rply
py-rpy2
py-rq
py-rsa Add checksum for py-rsa 4.9 (#34115) 2022-11-28 14:10:21 -07:00
py-rsatoolbox
py-rseqc
py-rst2pdf
py-rtree
py-ruamel-ordereddict
py-ruamel-yaml
py-ruamel-yaml-clib
py-rx
py-s3cmd
py-s3fs
py-s3transfer py-{boto3,botocore,jmespath,s3transfer} bump (#34423) 2022-12-10 09:07:58 -06:00
py-sacremoses
py-saga-python
py-salib
py-sanic
py-scandir
py-scanpy
py-schema
py-schema-salad adding 2nd bunch of nf-core deps from update/nextflow-tools (#34562) 2022-12-16 15:18:49 -07:00
py-scientificpython
py-scikit-build
py-scikit-fmm
py-scikit-fuzzy
py-scikit-image py-scikit-image: add 0.19.3 (#34618) 2022-12-20 12:59:48 -06:00
py-scikit-learn py-scikit-learn: add v1.2.0 (#34408) 2022-12-10 11:10:31 -06:00
py-scikit-learn-extra
py-scikit-optimize
py-scinum
py-scipy py-scipy: add v1.10.0 (#34799) 2023-01-10 11:43:55 +01:00
py-scooby
py-scoop
py-scp
py-scs
py-sdmetrics
py-sdv
py-seaborn
py-secretstorage
py-segmentation-models-pytorch py-segmentation-models-pytorch: add v0.3.1 (#34214) 2022-11-30 10:58:27 -08:00
py-selenium
py-semantic-version
py-semver
py-send2trash
py-sentencepiece
py-sentry-sdk
py-seqeval
py-seriate
py-serpent
py-session-info
py-setproctitle
py-setupmeta py-setupmeta: add 3.3.2 (#34421) 2022-12-09 12:32:19 -06:00
py-setuptools Add back depends_on directives needed to bootstrap on Python 3.6 (#34355) 2022-12-06 20:08:26 +01:00
py-setuptools-cpp
py-setuptools-git
py-setuptools-rust
py-setuptools-scm
py-setuptools-scm-git-archive py-setuptools-scm-git-archive: add 1.4 (#34422) 2022-12-10 09:58:39 -06:00
py-sfepy
py-sgp4
py-sh py-sh: new versions (#34458) 2022-12-12 20:15:28 -07:00
py-shapely py-shapely: add v2.0.0 (#34475) 2022-12-13 09:59:23 +01:00
py-shared-memory38
py-shellescape adding 2nd bunch of nf-core deps from update/nextflow-tools (#34562) 2022-12-16 15:18:49 -07:00
py-shellingham
py-shiboken
py-shiboken2
py-shortbred
py-shortuuid py-shortuuid: add version 1.0.11 (#34739) 2023-01-03 16:35:13 -06:00
py-shroud
py-shtab
py-sierrapy
py-simpleeval
py-simplegeneric
py-simplejson py-simplejson: add 3.18.0 (#34430) 2022-12-09 13:11:30 -07:00
py-simplekml
py-sip
py-six
py-skl2onnx
py-slepc4py
py-slurm-pipeline
py-smac
py-smart-open
py-smartypants
py-smmap
py-snappy
py-sncosmo
py-sniffio
py-snowballstemmer py-snowballstemmer: add 2.2.0 (#34459) 2022-12-12 10:23:55 -06:00
py-snuggs
py-sobol-seq
py-sonlib
py-sortedcollections
py-sortedcontainers
py-soundfile
py-soupsieve
py-spacy
py-spacy-models-en-core-web-sm
py-spacy-models-en-vectors-web-lg
py-sparse
py-spatialist
py-spatialite
py-spdlog
py-spectra
py-spectral
py-speech-recognition
py-spefile
py-spgl1
py-spglib
py-spherical
py-sphinx py-sphinx: add v6.0.0 (#34724) 2023-01-02 18:57:49 +01:00
py-sphinx-argparse
py-sphinx-autodoc-typehints
py-sphinx-bootstrap-theme
py-sphinx-copybutton
py-sphinx-design
py-sphinx-gallery
py-sphinx-multiversion
py-sphinx-rtd-theme
py-sphinx-tabs
py-sphinxautomodapi
py-sphinxcontrib-applehelp py-sphinxcontrib-applehelp: add 1.0.2 (#34461) 2022-12-12 13:56:48 -06:00
py-sphinxcontrib-bibtex
py-sphinxcontrib-devhelp py-sphinxcontrib-devhelp: add 1.0.2 (#34462) 2022-12-12 13:57:06 -06:00
py-sphinxcontrib-htmlhelp
py-sphinxcontrib-issuetracker
py-sphinxcontrib-jsmath
py-sphinxcontrib-mermaid
py-sphinxcontrib-napoleon
py-sphinxcontrib-programoutput
py-sphinxcontrib-qthelp py-sphinxcontrib-qthelp: add 1.0.3 (#34495) 2022-12-13 16:08:06 -06:00
py-sphinxcontrib-serializinghtml
py-sphinxcontrib-trio
py-sphinxcontrib-websupport
py-sphobjinv
py-spyder
py-spykeutils
py-spython Add recipe for singularity-hpc, py-spython (#34234) 2022-12-07 20:07:30 -06:00
py-sqlalchemy edits to 8x existing recipes, mostly new versions, plus two dependency fixes (#34516) 2022-12-14 12:28:33 -07:00
py-sqlalchemy-stubs
py-sqlalchemy-utils
py-sqlparse
py-srsly
py-sshtunnel
py-stack-data
py-starlette adding 3rd bunch of nf-core deps from update/nextflow-tools (#34563) 2023-01-08 20:06:59 -08:00
py-statmorph New package: py-statmorph (#34158) 2022-11-28 15:46:10 -06:00
py-statsmodels
py-stdlib-list
py-stestr
py-stevedore
py-stomp-py
py-stopit
py-storm
py-stratify
py-stsci-distutils
py-stui New package: py-stui (#34156) 2022-11-28 15:45:40 -06:00
py-submitit py-submitit: add 1.4.5 (#34460) 2022-12-13 16:11:14 -06:00
py-subrosa
py-supervisor adding 3rd bunch of nf-core deps from update/nextflow-tools (#34563) 2023-01-08 20:06:59 -08:00
py-svgpath Add py-svgpath and py-trimesh (#34471) 2023-01-04 11:00:00 -06:00
py-svgpathtools
py-svgutils
py-svgwrite
py-symengine
py-symfit
py-sympy
py-syned
py-systemd-python
py-tables
py-tabulate
py-tap-py
py-tatsu
py-tblib
py-tbparse
py-templateflow
py-tempora
py-tenacity
py-tensorboard
py-tensorboard-data-server py-tensorboard-data-server: build needs rust+rustfmt (#34465) 2022-12-13 10:56:31 -07:00
py-tensorboard-plugin-wit
py-tensorboardx
py-tensorflow py-tensorflow: patch for cuBLAS error (#34279) 2022-12-03 09:17:12 -07:00
py-tensorflow-datasets
py-tensorflow-estimator
py-tensorflow-hub
py-tensorflow-metadata
py-tensorflow-probability
py-termcolor
py-terminado
py-terminaltables
py-tern
py-testfixtures
py-testinfra
py-testpath
py-testrepository
py-testresources
py-testscenarios
py-testtools
py-tetoolkit
py-text-unidecode
py-textblob
py-texttable
py-tfdlpack
py-theano
py-thinc
py-thirdorder
py-threadpoolctl
py-throttler Add new version of snakemake (#34041) 2022-11-28 15:10:10 -07:00
py-tifffile py-tifffile: add 2022.10.10 (#34499) 2022-12-13 16:09:01 -06:00
py-timm
py-tinyarray
py-tinycss2
py-tinydb
py-tokenize-rt
py-tokenizers
py-toml
py-tomli Add py-yt 4.x versions (#30418) 2022-11-30 12:03:26 -06:00
py-tomli-w
py-tomlkit
py-tomopy
py-toolz
py-toposort
py-torch Update PyTorch ecosystem (#34582) 2022-12-17 11:51:59 -07:00
py-torch-cluster
py-torch-geometric
py-torch-nvidia-apex
py-torch-scatter
py-torch-sparse
py-torch-spline-conv
py-torchaudio Update PyTorch ecosystem (#34582) 2022-12-17 11:51:59 -07:00
py-torchdata Update PyTorch ecosystem (#34582) 2022-12-17 11:51:59 -07:00
py-torchdiffeq New package: py-torchdiffeq (#34409) 2022-12-09 12:38:14 -06:00
py-torchfile
py-torchgeo
py-torchmeta
py-torchmetrics py-torchmetrics: add v0.11.0 (#34220) 2022-12-04 15:32:02 -07:00
py-torchsummary
py-torchtext Update PyTorch ecosystem (#34582) 2022-12-17 11:51:59 -07:00
py-torchvision Update PyTorch ecosystem (#34582) 2022-12-17 11:51:59 -07:00
py-tornado
py-tox
py-tpot
py-tqdm
py-traceback2
py-traitlets py-traitlets: add w5.7.1 (#34525) 2022-12-14 21:34:51 -06:00
py-traits py-traits: add 6.4.1 (#34550) 2022-12-15 13:10:16 -06:00
py-traitsui
py-transformers
py-transforms3d
py-treehash
py-triangle
py-trimesh Add py-svgpath and py-trimesh (#34471) 2023-01-04 11:00:00 -06:00
py-trojanzoo-sphinx-theme
py-tuiview
py-tuspy adding 2nd bunch of nf-core deps from update/nextflow-tools (#34562) 2022-12-16 15:18:49 -07:00
py-tweedledum
py-twine py-twine: add 4.0.1, py-readme-renderer: add 37.3 (#34203) 2022-12-01 12:29:10 -06:00
py-twisted
py-typed-ast Bootstrap most of Spack dependencies using environments (#34029) 2022-12-06 11:54:02 +01:00
py-typeguard
py-types-dataclasses adding 2nd bunch of nf-core deps from update/nextflow-tools (#34562) 2022-12-16 15:18:49 -07:00
py-types-pkg-resources adding 2nd bunch of nf-core deps from update/nextflow-tools (#34562) 2022-12-16 15:18:49 -07:00
py-types-psutil
py-types-python-dateutil
py-types-requests
py-types-setuptools
py-types-typed-ast
py-types-urllib3
py-typesentry
py-typing-extensions
py-tzlocal edits to 8x existing recipes, mostly new versions, plus two dependency fixes (#34516) 2022-12-14 12:28:33 -07:00
py-ubiquerg Adding first bunch of recipes for dependencies of nf-core-tools (#34537) 2022-12-16 14:28:51 -07:00
py-ucsf-pyem
py-ucx-py
py-uhi
py-ujson
py-umalqurra
py-umap-learn
py-umi-tools
py-uncertainties
py-unicycler
py-unidecode
py-unittest2py3k
py-unshare
py-unyt Add py-yt 4.x versions (#30418) 2022-11-30 12:03:26 -06:00
py-update-checker
py-uproot
py-uproot3
py-uproot3-methods
py-uproot4
py-uritemplate
py-url-normalize Adding first bunch of recipes for dependencies of nf-core-tools (#34537) 2022-12-16 14:28:51 -07:00
py-urllib3
py-urllib3-secure-extra
py-urwid
py-us
py-usgs
py-utils
py-uvloop
py-uvw py-uvw: added v0.5.0 (#34677) 2022-12-24 11:12:44 -06:00
py-uwsgi
py-vcf-kit
py-vcrpy py-vcrpy: add 4.2.1 (#34636) 2022-12-21 11:02:55 -07:00
py-vcstool
py-vcstools
py-vcversioner
py-vector
py-vector-quantize-pytorch
py-vermin
py-versioneer
py-vine
py-virtualenv
py-virtualenv-clone
py-virtualenvwrapper
py-visdom
py-voluptuous
py-vsc-base
py-vsc-install
py-vsts
py-vsts-cd-manager
py-walinuxagent
py-wand
py-wandb
py-warlock
py-warpx WarpX 22.11, 22.12 & PICMI-Standard (#34517) 2022-12-14 13:59:16 -08:00
py-wasabi
py-watchdog
py-wcsaxes
py-wcwidth
py-webargs
py-webencodings
py-webkit-server
py-weblogo
py-webob
py-websocket-client
py-websockets
py-werkzeug py-flask: add 2.2.2 and fix dependencies for py-werkzeug and py-markupsafe (#32849) 2022-12-01 22:56:18 -07:00
py-wget
py-whatshap
py-wheel Add back depends_on directives needed to bootstrap on Python 3.6 (#34355) 2022-12-06 20:08:26 +01:00
py-whichcraft
py-whoosh
py-widgetsnbextension
py-win-unicode-console
py-wincertstore
py-word2number
py-wordcloud
py-workload-automation
py-wradlib
py-wrapt
py-wsproto
py-wstool
py-wub
py-wurlitzer
py-ww
py-wxmplot
py-wxpython
py-x21
py-xarray
py-xattr
py-xdot
py-xenv
py-xgboost
py-xlrd
py-xlsxwriter
py-xlwt
py-xmlrunner
py-xmltodict
py-xonsh
py-xopen
py-xpyb
py-xrootdpyfs
py-xvfbwrapper
py-xxhash
py-yacman Adding first bunch of recipes for dependencies of nf-core-tools (#34537) 2022-12-16 14:28:51 -07:00
py-yacs
py-yahmm
py-yajl
py-yamlreader
py-yapf
py-yarl
py-yaspin
py-yolk3k
py-youtube-dl py-youtube-dl: add version 2021.12.17 (#34740) 2022-12-31 12:42:58 -06:00
py-yq
py-yt Add py-yt 4.x versions (#30418) 2022-11-30 12:03:26 -06:00
py-yte Add new version of snakemake (#34041) 2022-11-28 15:10:10 -07:00
py-ytopt
py-ytopt-autotune
py-zarr
py-zc-buildout
py-zc-lockfile
py-zict
py-zipfile-deflate64
py-zipp
py-zope-event
py-zope-interface
py-zxcvbn
pygmo
pythia6
pythia8
python Bootstrap most of Spack dependencies using environments (#34029) 2022-12-06 11:54:02 +01:00
q-e-sirius
qb3
qbank
qca
qcachegrind
qcat
qd
qemu
qgis
qgraf
qhull
qjson
qmcpack
qmd-progress
qnnpack
qorts
qoz
qperf
qrupdate
qscintilla
qt
qt-base qt-base: ~network by default (#34688) 2022-12-26 10:19:03 -06:00
qt-creator
qt-declarative
qt-quick3d
qt-quicktimeline
qt-shadertools
qtgraph
qthreads
qtkeychain
qtltools
qualimap
quantum-espresso quantum-espresso: enable linking with armpl-gcc and acfl for BLAS and FFT (#34416) 2022-12-22 09:50:51 +01:00
quartz
qucs
quicksilver
quota
qwt
qwtpolar
r
r3d
r-a4
r-a4base
r-a4classif
r-a4core
r-a4preproc
r-a4reporting
r-abadata
r-abaenrichment
r-abind
r-absseq
r-acde
r-acepack
r-acgh
r-acme
r-ada
r-adabag
r-ade4
r-adegenet
r-adegraphics
r-adephylo
r-adespatial
r-adgoftest
r-adsplit
r-aer
r-afex
r-affxparser
r-affy
r-affycomp
r-affycompatible
r-affycontam
r-affycoretools
r-affydata
r-affyexpress
r-affyilm
r-affyio r-affyio: add zlib dependency (#34743) 2023-01-02 18:33:27 +01:00
r-affypdnn
r-affyplm
r-affyqcreport
r-affyrnadegradation
r-agdex
r-agilp
r-agimicrorna
r-aims
r-aldex2
r-allelicimbalance
r-alpine
r-als
r-alsace
r-altcdfenvs
r-amap
r-amelia
r-ampliqueso
r-analysispageserver
r-anaquin
r-aneufinder
r-aneufinderdata
r-animation
r-annaffy
r-annotate
r-annotationdbi
r-annotationfilter
r-annotationforge
r-annotationhub
r-anytime
r-aod
r-ape
r-aplot
r-argparse
r-aroma-light
r-ash
r-askpass
r-assertive
r-assertive-base
r-assertive-code
r-assertive-data
r-assertive-data-uk
r-assertive-data-us
r-assertive-datetimes
r-assertive-files
r-assertive-matrices
r-assertive-models
r-assertive-numbers
r-assertive-properties
r-assertive-reflection
r-assertive-sets
r-assertive-strings
r-assertive-types
r-assertthat
r-backports
r-bamsignals
r-base64
r-base64enc
r-bayesm
r-bayesplot
r-bbmisc
r-beachmat
r-beanplot
r-beeswarm
r-bfast
r-bfastspatial
r-bglr
r-bh
r-biasedurn
r-bibtex
r-bigalgebra
r-bigmemory
r-bigmemory-sri
r-bindr
r-bindrcpp
r-bio3d
r-biobase
r-biocfilecache
r-biocgenerics
r-biocinstaller
r-biocio
r-biocmanager
r-biocneighbors
r-biocparallel
r-biocsingular
r-biocstyle
r-biocversion
r-biom-utils
r-biomart
r-biomartr
r-biomformat
r-biostrings
r-biovizbase
r-bit
r-bit64
r-bitops
r-blavaan
r-blob
r-blockmodeling
r-bluster
r-bmp
r-bookdown
r-boot
r-boruta
r-brew
r-bridgesampling
r-brio
r-brms
r-brobdingnag
r-broom
r-bsgenome
r-bsgenome-hsapiens-ucsc-hg19
r-bslib
r-bsseq
r-bumphunter
r-bwstest
r-c50
r-ca
r-cachem
r-cairo r-cairo: add needed dependency on libxt (#34744) 2023-01-02 18:33:15 +01:00
r-callr
r-car
r-caracas
r-cardata
r-caret
r-caretensemble
r-caroline
r-category
r-catools
r-cca
r-ccp
r-cdcfluview
r-cellranger
r-champ
r-champdata
r-checkmate
r-checkpoint
r-chemometrics
r-chipseq
r-chron
r-circlize
r-circstats
r-class
r-classint
r-cli
r-clipr
r-clisymbols
r-clue
r-cluster
r-clustergeneration
r-clusterprofiler
r-cmdstanr
r-cner
r-coda
r-codetools
r-codex
r-coin
r-colorspace
r-colourpicker
r-combinat
r-commonmark
r-complexheatmap
r-compositions
r-compquadform
r-condop
r-conquer
r-construct
r-convevol
r-copula
r-corhmm
r-corpcor
r-corrplot
r-countrycode
r-covr
r-cowplot
r-cpp11
r-crayon
r-credentials
r-crosstalk
r-crul
r-ctc
r-cubature
r-cubist
r-curl
r-dada2
r-data-table
r-dbi
r-dbplyr
r-debugme
r-decipher
r-delayedarray
r-delayedmatrixstats
r-deldir
r-dendextend
r-deoptim
r-deoptimr
r-deriv
r-desc
r-deseq
r-deseq2
r-desolve
r-devtools
r-dexseq
r-diagrammer
r-dicekriging
r-dichromat
r-diffobj
r-diffusionmap
r-digest
r-diptest
r-dirichletmultinomial
r-dismo
r-distributional
r-diversitree
r-dmrcate
r-dnacopy
r-do-db
r-domc
r-doparallel
r-dorng
r-dose
r-dosnow
r-dotcall64
r-downlit
r-downloader
r-dplyr
r-dqrng
r-dss
r-dt
r-dtplyr
r-dtw
r-dygraphs
r-dynamictreecut
r-e1071
r-earth
r-ecp
r-edger
r-effects
r-elemstatlearn
r-ellipse
r-ellipsis
r-emmeans
r-emmli
r-energy
r-enrichplot
r-ensembldb
r-envstats
r-ergm
r-estimability
r-europepmc
r-evaluate
r-evd
r-exactextractr
r-exomecopy
r-exomedepth
r-experimenthub
r-expint
r-expm
r-factoextra
r-factominer
r-fansi
r-farver
r-fastcluster
r-fastdigest
r-fastica
r-fastmap
r-fastmatch
r-fastmatrix
r-fda
r-fdb-infiniummethylation-hg18
r-fdb-infiniummethylation-hg19
r-fds
r-ff
r-fftwtools
r-fgsea
r-fields
r-filehash
r-filelock
r-findpython
r-fit-models
r-fitdistrplus
r-flashclust
r-flexclust
r-flexmix
r-fnn
r-fontawesome
r-forcats
r-foreach
r-forecast
r-foreign
r-formatr
r-formula
r-fpc
r-fpcompare
r-fracdiff
r-fs
r-futile-logger
r-futile-options
r-future
r-future-apply
r-gamlss
r-gamlss-data
r-gamlss-dist
r-gamm4
r-gargle
r-gbm
r-gbrd
r-gcrma
r-gdalutilities
r-gdalutils
r-gdata
r-gdsfmt
r-geiger
r-genefilter
r-genelendatabase
r-genemeta
r-geneplotter
r-generics
r-genetics
r-genie3
r-genomeinfodb
r-genomeinfodbdata
r-genomicalignments
r-genomicfeatures
r-genomicranges
r-gensa
r-geojsonsf
r-geometries
r-geometry
r-geomorph
r-geonames
r-geoquery
r-geor
r-geosphere
r-gert
r-getopt
r-getoptlong
r-ggally
r-ggbeeswarm
r-ggbio
r-ggdendro
r-ggforce
r-ggfun
r-ggjoy
r-ggmap
r-ggnewscale
r-ggplot2
r-ggplotify
r-ggpubr
r-ggraph
r-ggrastr
r-ggrepel
r-ggridges
r-ggsci
r-ggsignif
r-ggthemes
r-ggtree
r-ggvis
r-gh
r-gistr
r-git2r
r-gitcreds
r-glimma
r-glmgampoi
r-glmnet
r-globaloptions
r-globals
r-globaltest
r-glue
r-gmodels
r-gmp
r-go-db
r-goftest
r-gofuncr
r-googledrive
r-googlesheets4
r-googlevis
r-goplot
r-gosemsim
r-goseq
r-gostats
r-gower
r-gparotation
r-gplots
r-graph
r-graphlayouts
r-grbase
r-gridbase
r-gridextra
r-gridgraphics
r-gsa
r-gsalib
r-gseabase
r-gsl
r-gsodr
r-gson
r-gss
r-gstat
r-gsubfn
r-gtable
r-gtools
r-gtrellis
r-gviz
r-gwmodel
r-hardhat
r-haven
r-hdf5array r-hdf5array: add needed dependency on zlib (#34745) 2023-01-02 18:32:59 +01:00
r-hdf5r
r-hdo-db
r-hdrcde
r-here
r-hexbin
r-hh
r-highr
r-hmisc
r-hms
r-hoardr
r-htmltable
r-htmltools
r-htmlwidgets
r-httpcode
r-httpuv
r-httr
r-hwriter
r-hypergraph
r-ica
r-ids
r-igraph
r-illumina450probevariants-db
r-illuminahumanmethylation450kanno-ilmn12-hg19
r-illuminahumanmethylation450kmanifest
r-illuminahumanmethylationepicanno-ilm10b4-hg19
r-illuminahumanmethylationepicmanifest
r-illuminaio
r-imager
r-impute
r-influencer
r-ini
r-inline
r-insight
r-interactivedisplaybase
r-interp
r-intervals
r-inum
r-ipred
r-iranges
r-irdisplay
r-irkernel Remove dep on jupyter meta-package (#34573) 2022-12-19 17:22:34 -06:00
r-irlba
r-isdparser
r-islr
r-iso
r-isoband
r-isva
r-iterators
r-jade
r-janitor
r-jaspar2018
r-jomo
r-jpeg
r-jquerylib
r-jsonify
r-jsonlite
r-kegg-db
r-kegggraph
r-keggrest
r-kernlab
r-kernsmooth
r-kknn
r-klar
r-knitr
r-kpmt
r-ks
r-ksamples
r-labeling
r-labelled
r-lambda-r
r-laplacesdemon
r-lars
r-later
r-lattice
r-latticeextra
r-lava
r-lavaan
r-lazyeval
r-ldheatmap
r-leafem
r-leaflet
r-leaflet-providers
r-leafpop
r-leaps
r-learnbayes
r-leiden
r-lfe
r-lhs
r-libcoin
r-libpressio
r-lifecycle
r-limma
r-limsolve
r-linprog
r-listenv
r-lme4
r-lmertest
r-lmtest
r-lobstr
r-locfit
r-log4r
r-loo
r-lpsolve
r-lpsolveapi
r-lsei
r-lubridate
r-lumi
r-lwgeom
r-magic
r-magick
r-magrittr
r-makecdfenv
r-maldiquant
r-manipulatewidget
r-mapplots
r-mapproj
r-maps
r-maptools
r-mapview
r-markdown
r-marray
r-mass
r-mathjaxr
r-matlab
r-matr
r-matrix
r-matrixgenerics
r-matrixmodels
r-matrixstats
r-mclust
r-mcmc
r-mcmcglmm
r-mcmcpack
r-mco
r-mda
r-memoise
r-memuse
r-mergemaid
r-metap
r-metapod
r-methylumi
r-mgcv
r-mgraster
r-mice
r-microbenchmark
r-mime
r-minfi
r-miniui
r-minqa
r-misc3d
r-missmethyl
r-mitml
r-mitools
r-mixtools
r-mlbench
r-mlinterfaces
r-mlr
r-mlrmbo
r-mmwrweek
r-mnormt
r-mockery
r-modelmetrics
r-modelr
r-modeltools
r-mpm
r-mscoreutils
r-msnbase
r-multcomp
r-multcompview
r-multicool
r-multitaper
r-multtest
r-munsell
r-mutoss
r-mvtnorm
r-mzid
r-mzr
r-nada
r-nanotime
r-ncbit
r-ncdf4
r-network
r-networkd3
r-neuralnet
r-nfactors
r-nimble
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r-nlme
r-nloptr
r-nmf
r-nmof
r-nnet
r-nnls
r-nonnest2
r-nor1mix
r-nortest
r-np
r-npsurv
r-numderiv
r-oligoclasses
r-openssl
r-openxlsx
r-optimparallel
r-optimx
r-optparse
r-ordinal
r-org-hs-eg-db
r-organismdbi
r-packrat
r-pacman
r-paleotree
r-pamr
r-pan
r-parallelly
r-parallelmap
r-paramhelpers
r-party
r-partykit
r-patchwork
r-pathview
r-pbapply
r-pbdzmq
r-pbivnorm
r-pbkrtest
r-pcamethods
r-pcapp
r-pegas
r-permute
r-pfam-db
r-phangorn
r-phantompeakqualtools
r-pheatmap
r-philentropy
r-phylobase
r-phyloseq
r-phylostratr
r-phytools
r-picante
r-pillar
r-pinfsc50
r-pixmap
r-pkgbuild
r-pkgcache
r-pkgconfig
r-pkgdepends
r-pkgdown
r-pkgload
r-pkgmaker
r-plogr
r-plot3d
r-plotly
r-plotmo
r-plotrix
r-pls
r-plyr
r-pmcmr
r-pmcmrplus
r-png
r-polspline
r-polyclip
r-polynom
r-pool
r-poorman
r-popgenome
r-popvar
r-posterior
r-powerlaw
r-prabclus
r-pracma
r-praise
r-preprocesscore
r-prettydoc
r-prettyunits
r-proc
r-processx
r-prodlim
r-profvis
r-progress
r-progressr
r-proj
r-proj4
r-projpred
r-promises
r-protgenerics
r-proto
r-proxy
r-pryr
r-ps
r-pscbs
r-pspline
r-psych
r-ptw
r-purrr
r-pvclust
r-qqconf
r-qs
r-qtl
r-quadprog
r-quantmod
r-quantreg
r-quantro
r-questionr
r-quickplot
r-qvalue
r-r6
r-r-cache
r-r-methodss3
r-r-oo
r-r-utils
r-ragg
r-rainbow
r-randomfields
r-randomfieldsutils
r-randomforest
r-randomglm
r-ranger
r-rann
r-rapidjsonr
r-rapiserialize
r-rappdirs
r-raster
r-rbgl
r-rbibutils
r-rbokeh
r-rcmdcheck
r-rcolorbrewer
r-rcpp
r-rcppannoy
r-rcpparmadillo
r-rcppblaze
r-rcppcctz
r-rcppcnpy
r-rcppdate
r-rcppde
r-rcppeigen
r-rcppgsl
r-rcpphnsw
r-rcppml
r-rcppparallel
r-rcppprogress
r-rcpproll
r-rcpptoml
r-rcppziggurat
r-rcurl
r-rda
r-rdpack
r-readbitmap
r-readr
r-readxl
r-reams
r-recipes
r-registry
r-rematch
r-rematch2
r-remotes
r-renv
r-reordercluster
r-reportingtools
r-repr
r-reprex
r-reproducible
r-require
r-reshape
r-reshape2
r-restfulr
r-reticulate
r-rex
r-rfast
r-rferns
r-rgdal r-rgdal: adding new version 1.6-2 (#34502) 2022-12-13 20:06:31 -07:00
r-rgenoud
r-rgeos
r-rgexf
r-rgl
r-rgooglemaps
r-rgraphviz
r-rhdf5 r-rhdf5: add needed zlib dependency (#34746) 2023-01-02 18:32:44 +01:00
r-rhdf5filters r-rhdf5filters: add needed zlib dependency (#34747) 2023-01-02 18:32:31 +01:00
r-rhdf5lib r-rhdf5lib: add needed zlib dependency (#34748) 2023-01-02 18:32:17 +01:00
r-rhmmer
r-rhtslib
r-rinside
r-rio
r-rjags
r-rjava r-rjava: add needed zlib dependency (#34749) 2023-01-02 18:31:56 +01:00
r-rjson
r-rjsonio
r-rlang
r-rle
r-rmariadb
r-rmarkdown
r-rminer
r-rmpfr
r-rmpi
r-rms
r-rmutil
r-rmysql
r-rnaseqmap
r-rncl
r-rnexml
r-rngtools
r-rnoaa
r-robust
r-robustbase
r-roc
r-rocr
r-rodbc
r-rook
r-rots
r-roxygen2
r-rpart
r-rpart-plot
r-rpmm
r-rpostgres
r-rpostgresql
r-rprojroot
r-rpsychi
r-rrblup
r-rrcov
r-rrpp
r-rsamtools
r-rsconnect
r-rsnns
r-rsolnp
r-rspectra
r-rsqlite
r-rstan
r-rstantools
r-rstatix
r-rstudioapi
r-rsvd
r-rtracklayer r-rtracklayer: add zlib and openssl dependencies (#34750) 2023-01-02 18:31:37 +01:00
r-rtsne
r-runit
r-runjags
r-ruv
r-rvcheck
r-rversions
r-rvest
r-rviennacl
r-rzmq
r-s2
r-s4vectors
r-samr
r-sandwich
r-sass
r-satellite
r-scaledmatrix
r-scales
r-scater
r-scattermore
r-scatterpie
r-scatterplot3d
r-scdblfinder
r-scran
r-scrime
r-sctransform
r-scuttle
r-sdmtools
r-segmented
r-selectr
r-seqinr
r-seqlogo
r-servr
r-sessioninfo
r-seurat
r-seuratobject
r-sf
r-sfheaders
r-sfsmisc
r-sftime
r-shadowtext
r-shape
r-shiny
r-shinydashboard
r-shinyfiles
r-shinyjs
r-shinystan
r-shinythemes
r-shortread
r-siggenes
r-signac r-signac: added needed zlib dependency (#34751) 2023-01-02 18:31:22 +01:00
r-simpleaffy
r-singlecellexperiment
r-sitmo
r-sm
r-smoof
r-sn
r-snakecase
r-snow
r-snowfall
r-snprelate
r-snpstats
r-som
r-somaticsignatures
r-sourcetools
r-sp
r-spacetime
r-spades
r-spades-addins
r-spades-core
r-spades-tools
r-spam
r-sparsem
r-sparsematrixstats
r-spatial
r-spatialeco
r-spatialpack
r-spatialreg
r-spatstat
r-spatstat-core
r-spatstat-data
r-spatstat-explore
r-spatstat-geom
r-spatstat-linnet
r-spatstat-random
r-spatstat-sparse
r-spatstat-utils
r-spdata
r-spdep
r-speedglm
r-spem
r-splancs
r-splitstackshape
r-sqldf
r-squarem
r-squash
r-sseq
r-stabledist
r-stanheaders
r-stargazer
r-stars
r-statmod
r-statnet-common
r-stringfish
r-stringi
r-stringr
r-strucchange
r-strucchangercpp
r-styler
r-subplex
r-summarizedexperiment
r-suppdists
r-survey
r-survival
r-sva
r-svglite
r-sys
r-systemfonts
r-tarifx
r-taxizedb
r-tclust
r-teachingdemos
r-tensor
r-tensora
r-terra
r-tester
r-testit
r-testthat
r-textshaping
r-tfbstools
r-tfisher
r-tfmpvalue
r-th-data
r-threejs
r-tibble
r-tictoc
r-tidycensus
r-tidygraph
r-tidyr
r-tidyselect
r-tidytree
r-tidyverse
r-tiff
r-tigris
r-timechange
r-timedate
r-tinytex
r-tmixclust
r-tmvnsim
r-topgo
r-treeio
r-triebeard
r-trimcluster
r-truncdist
r-truncnorm
r-trust
r-tseries
r-tsne
r-ttr
r-tweenr
r-txdb-hsapiens-ucsc-hg18-knowngene
r-txdb-hsapiens-ucsc-hg19-knowngene
r-tximport
r-tximportdata
r-tzdb
r-ucminf
r-udunits2
r-units
r-upsetr
r-urca
r-urlchecker
r-urltools
r-usethis
r-utf8
r-uuid
r-uwot
r-v8
r-variantannotation
r-varselrf
r-vcd
r-vcfr
r-vctrs
r-vegan
r-vfs
r-vgam
r-vioplot
r-vipor
r-viridis
r-viridislite
r-visnetwork
r-vroom
r-vsn
r-waldo
r-watermelon
r-webshot
r-wgcna
r-whisker
r-withr
r-wk
r-xde
r-xfun
r-xgboost
r-xlconnect
r-xlconnectjars
r-xlsx
r-xlsxjars
r-xmapbridge
r-xml
r-xml2
r-xnomial
r-xopen
r-xtable
r-xts
r-xvector
r-yaimpute
r-yaml
r-yapsa
r-yaqcaffy
r-yarn
r-yulab-utils
r-zcompositions
r-zeallot
r-zip
r-zlibbioc
r-zoo
rabbitmq
racket
racon
raft
ragel
raja
ramulator
randfold
random123
randrproto
range-v3
rankstr
rapidjson
raptor2
rarpd
rasdaemon
rasqal
ratel
ravel
raxml
raxml-ng
ray
rccl rocm: make amdgpu_target sticky (#34591) 2022-12-21 20:21:20 +01:00
rccl-tests
rclone
rdc rocm packages: Update the version for 5.3.0 release (#33405) 2023-01-09 18:50:00 -08:00
rdkit
rdma-core
rdp-classifier
rdptools
re2
re2c
readfq
readline bash: add v5.2, readline patches (#34301) 2022-12-08 13:46:21 -07:00
recola
recola-sm
recon
recorder
recordproto
redis redis: newer version and added TLS support (#34230) 2022-12-05 12:44:13 -07:00
redis-plus-plus redis-plus-plus: newer version and added TLS support (#34197) 2022-11-30 11:18:47 -08:00
reditools
redland
redland-bindings
redset
redundans
reframe Add new versions of Reframe (#34801) 2023-01-10 13:09:18 +01:00
regcm
relax
relion relion: add v4.0.0 (#34600) 2022-12-21 20:41:13 +01:00
remhos
rempi
rename
rendercheck
renderproto
repeatmasker
repeatmodeler
repeatscout
reprimand
resourceproto
restic Add restic v0.14.0 (#34148) 2022-11-28 08:39:37 +01:00
revbayes
revocap-coupler
revocap-refiner
rgb
rhash Restrict a patch of rhash to versions >=1.3.6 (#34310) 2022-12-22 08:02:15 -07:00
rinetd
ripgrep
riscv-gnu-toolchain
rivet
rkt-base
rkt-cext-lib
rkt-compiler-lib
rkt-dynext-lib
rkt-rackunit-lib
rkt-scheme-lib
rkt-testing-util-lib
rkt-zo-lib
rlwrap
rmats
rmgdft
rmlab
rna-seqc
rnaquast
rnaz
rng-tools
rngstreams
rnpletal
roary
rocalution rocm: make amdgpu_target sticky (#34591) 2022-12-21 20:21:20 +01:00
rocblas rocm: make amdgpu_target sticky (#34591) 2022-12-21 20:21:20 +01:00
rocfft rocm: make amdgpu_target sticky (#34591) 2022-12-21 20:21:20 +01:00
rocketmq
rocksdb
rockstar
rocm-bandwidth-test ROCm 5.3.0 updates (#33320) 2022-12-12 13:46:20 -06:00
rocm-clang-ocl ROCm 5.3.0 updates (#33320) 2022-12-12 13:46:20 -06:00
rocm-cmake ROCm 5.3.0 updates (#33320) 2022-12-12 13:46:20 -06:00
rocm-dbgapi ROCm 5.3.0 updates (#33320) 2022-12-12 13:46:20 -06:00
rocm-debug-agent ROCm 5.3.0 updates (#33320) 2022-12-12 13:46:20 -06:00
rocm-device-libs ROCm 5.3.0 updates (#33320) 2022-12-12 13:46:20 -06:00
rocm-gdb ROCm 5.3.0 updates (#33320) 2022-12-12 13:46:20 -06:00
rocm-opencl ROCm 5.3.0 updates (#33320) 2022-12-12 13:46:20 -06:00
rocm-openmp-extras rocm packages: Update the version for 5.3.0 release (#33405) 2023-01-09 18:50:00 -08:00
rocm-smi
rocm-smi-lib ROCm 5.3.0 updates (#33320) 2022-12-12 13:46:20 -06:00
rocm-tensile ROCm 5.3.0 updates (#33320) 2022-12-12 13:46:20 -06:00
rocm-validation-suite RVS 5.1.0 and later works with googletest shared variant (#34802) 2023-01-09 14:41:40 -08:00
rocminfo ROCm 5.3.0 updates (#33320) 2022-12-12 13:46:20 -06:00
rocprim rocm packages: Update the version for 5.3.0 release (#33405) 2023-01-09 18:50:00 -08:00
rocprofiler-dev ROCm 5.3.0 updates (#33320) 2022-12-12 13:46:20 -06:00
rocrand Using corresponding commit ids of hiprand for each releases (#34545) 2022-12-22 09:36:14 +01:00
rocsolver rocm: make amdgpu_target sticky (#34591) 2022-12-21 20:21:20 +01:00
rocsparse rocm: make amdgpu_target sticky (#34591) 2022-12-21 20:21:20 +01:00
rocthrust rocm: make amdgpu_target sticky (#34591) 2022-12-21 20:21:20 +01:00
roctracer-dev roctracer: fixed a bug in how the external is identified (#33517) 2022-12-15 23:29:36 +01:00
roctracer-dev-api ROCm 5.3.0 updates (#33320) 2022-12-12 13:46:20 -06:00
rocwmma rocm packages: Update the version for 5.3.0 release (#33405) 2023-01-09 18:50:00 -08:00
rodinia
roms
root ROOT: new versions and associated dependency constraints (#34185) 2022-12-06 08:25:52 -07:00
rose
ross
routinator
routino
rpcsvc-proto
rpm
rr
rrdtool
rsbench
rsem
rsl rsl: add needed dependency on rpc (#34756) 2023-01-02 18:28:10 +01:00
rstart
rstudio
rsync
rsyslog
rt-tests
rtags
rtax
ruby
ruby-asciidoctor
ruby-erubis
ruby-gnuplot
ruby-hpricot
ruby-mustache
ruby-narray
ruby-rake
ruby-rdiscount
ruby-ronn
ruby-rubyinline
ruby-svn2git
ruby-terminal-table
ruby-thor
ruby-tmuxinator
ruby-unicode-display-width
ruby-xdg
ruby-zentest
runc
rust rust: add 1.65.0 (#34124) 2022-11-27 16:03:46 +01:00
rust-bindgen
sabre
saga-gis
sailfish
salmon
salmon-tddft
salome-configuration
salome-med
salome-medcoupling
sam2p
sambamba
samblaster
samrai
samtools
sandbox
sarus
satsuma2
savanna
saws
sblim-sfcc
sbml
sbp
sbt
scala
scalasca
scale
scallop
scalpel
scan-for-matches
scantailor
scipoptsuite
scitokens-cpp
scons
scorec-core
scorep
scorpio
scotch
scr scr: require spath+mpi (#34775) 2023-01-03 09:53:48 -06:00
screen
scripts
scrnsaverproto
scrot
scs
sctk
sdl2
sdl2-image
sdsl-lite
seacas
seal
sed
sensei SWIG: new version 4.1.0 (#34250) 2022-12-05 23:30:14 +01:00
sentencepiece
sentieon-genomics
sepp
seq-gen
seqan
seqkit
seqprep
seqtk
serf
serialbox
sessreg
setserial
setxkbmap
sfcgal
sfcio
sga
sgpp
shadow
shapeit
shapeit4
shapelib
shared-mime-info
shark
shc
shengbte
sherpa sherpa: add v2.2.13 (#34628) 2022-12-22 10:58:21 -07:00
shiro
shocklibs
shoremap
shortbred
shortstack
showfont
shtools
shuffile
sickle
sicm
siesta
sigcpp
sigio
signalp
signify
silo Fixes to the silo packages for 4.11. (#34275) 2022-12-12 07:39:24 -07:00
simde
simgrid
simmetrix-simmodsuite
simple-dftd3
simplemoc
simsipm
simul
simulationio simulationio: Explicitly enable/disable support for dependent packages (#34803) 2023-01-10 11:18:39 +01:00
sina
singularity
singularity-eos
singularity-hpc Add recipe for singularity-hpc, py-spython (#34234) 2022-12-07 20:07:30 -06:00
singularity-legacy
singularityce singularity: bugfix add space between prefix and other options (#34766) 2023-01-02 17:55:30 +01:00
sio
sionlib
sirius
sjpeg
skilion-onedrive
skopeo
sl
slang
slate
sleef
slepc
slf4j
slirp4netns slirp4netns: New version 1.2.0 (#34816) 2023-01-06 15:07:22 +01:00
sloccount
slurm
slurm-drmaa
smalt
smartdenovo
smartmontools
smof
smproxy
snakemake Add new version of snakemake (#34041) 2022-11-28 15:10:10 -07:00
snap
snap-berkeley
snap-korf
snappy
snbone
sniffles
snpeff
snphylo
snptest
soapdenovo2
soapdenovo-trans
socat
soci
sofa-c
sollve
sollya
solr
somatic-sniper
sombrero
sonlib
sortmerna
sos
sosflow
source-highlight
sowing
sox
sp
spack
spades
span-lite
spark
sparrow
sparse
sparsehash
sparskit
sparta
spath
spdlog spdlog: new version 1.11.0 depends_on fmt@9: when +fmt_external (#34731) 2023-01-10 13:20:32 +01:00
specfem3d-globe
spectra
spectre spectre: add v2022.12.16 (#34570) 2022-12-16 11:27:56 -07:00
spectrum-mpi
speex
speexdsp
sperr
spfft
spglib
sph2pipe
spherepack
spindle
spiner
spiral-package-fftx
spiral-package-hcol
spiral-package-mpi
spiral-package-simt
spiral-software
spla
spm
spot
sprng
sqlcipher
sqlite
sqlite-jdbc
sqlitebrowser
sqoop
squashfs
squashfs-mount
squashfuse
squid
sra-tools
sratoolkit
srilm
sse2neon
sshfs
sshpass
ssht
ssmtp
sspace-longread
sspace-standard
sst-core
sst-dumpi
sst-elements
sst-macro
sst-transports
stacks
staden-io-lib
star
star-ccm-plus
starlight
starpu starpu: add conflict for ~blocking +simgrid (#34616) 2022-12-21 20:09:23 +01:00
startup-notification
stat
stata
static-analysis-suite
stc
stdexec stdexec: skip build phase (#34425) 2022-12-12 07:16:40 -07:00
steps
stinger
storm
stow
strace
stream
stress
stress-ng
stressapptest
string-view-lite
stringtie
stripack
structure
strumpack
su2
sublime-text
subread
subversion
suite-sparse
sumaclust
sumo
sundials sundials: fix typo in smoke tests (#34539) 2022-12-15 09:07:54 +01:00
suntans
superchic
superlu
superlu-dist
superlu-mt
supernova
survey survey: add v1.0.7 (#34679) 2022-12-29 11:00:45 +01:00
sw4 SW4: new package (#34252) 2022-12-07 14:26:05 -07:00
sw4lite
swan
swap-assembler
swarm
swfft
swftools
swiftsim
swig SWIG: new version 4.1.0 (#34250) 2022-12-05 23:30:14 +01:00
swipl
symengine
symlinks
sympol
sys-sage
sysbench
syscalc
sysfsutils
sysget
sysstat
systemc
systemtap
sz
sz3
sz-cpp
szauto
tabix
tajo
talass talass: fixed URLs so the package is reachable (#34387) 2022-12-15 09:23:05 +01:00
talloc
tamaas tamaas: added v2.6.0 (#34676) 2022-12-29 11:04:33 +01:00
tangram
tantan
tar
targetp
task
taskd
taskflow
tasmanian
tassel
tau Use correct method for selecting compiler names. (#34175) 2022-12-02 15:02:24 -08:00
tauola
tbl2asn
tcl
tcl-itcl
tcl-tcllib
tcl-tclxml
tclap
tcoffee
tcpdump
tcptrace
tcsh
tdengine
tealeaf
teckit
tecplot
telegraf
tempestremap
templight
templight-tools
tempo Add packages related to the LWA software stack (#34112) 2022-12-05 09:48:04 -08:00
tengine
tensorflow-serving-client
tensorpipe
termcap
tesseract
testdfsio
testu01
tetgen
tethex
texinfo bugfix: make texinfo build properly with gettext (#34312) 2022-12-28 15:20:53 -08:00
texlive
texstudio
textparser
tfel
the-platinum-searcher
the-silver-searcher
thepeg
thermo4pfm Thermo4PFM: new package (#34287) 2022-12-05 12:03:44 +01:00
thornado-mini
thrift
thrust
tidy-html5
tig
time
timedatex
timemory
tini
tinker
tinygltf
tinyobjloader
tinyxml
tinyxml2
tioga
tippecanoe
tiptop
tix
tixi
tk
tkrzw
tl-expected Add new package: micromamba (#34195) 2022-12-12 14:00:41 -06:00
tldd
tmalign
tmhmm
tmux tmux: add 3.3a (#34671) 2022-12-24 01:52:32 +01:00
tomcat
toml11
toml-f
tophat
torque
totalview
tower-agent Nextflow, Tower Agent, Tower CLI: updates (#34515) 2022-12-14 11:44:22 -07:00
tower-cli Nextflow, Tower Agent, Tower CLI: updates (#34515) 2022-12-14 11:44:22 -07:00
tpm2-tss
tracer
tracy
tracy-client
tramonto
transabyss
transdecoder
transposome
transrate
transset
trapproto
tree
tree-sitter
treelite
treesub
trexio
trf
triangle
trident
trilinos trilinos: extend range of Teuchos patch (#34504) 2022-12-13 14:49:20 -07:00
trilinos-catalyst-ioss-adapter
trimal
trimgalore
trimmomatic
trinity trinity: add version 2.15.0-FULL (#34666) 2022-12-29 11:13:47 +01:00
trinotate
trnascan-se
truchas
tskit
tulip
turbine
turbomole
turnserver
twm
tycho2
typhon
typhonio
uchardet
ucx
udunits
ufo-core
ufo-filters
ufs-utils
ufs-weather-model
uftrace
umap
umesimd
umoci
umpire Only restrict CMake version in Umpire when examples and rocm are enabled (#32025) 2022-12-12 10:55:37 +01:00
unblur
uncrustify
unibilium set PREFIX in make() for some packages (#34773) 2023-01-04 15:08:15 +01:00
unifdef
unifyfs
unigen
unison
units
unittest-cpp
universal-ctags
unixodbc
unqlite
unrar
unuran
unzip
upcxx
upp
uqtk
uriparser
usbutils
usearch
userspace-rcu
utf8cpp
utf8proc
util-linux
util-linux-uuid
util-macros
uvw
vacuumms
vala Add gimp & dependent packages (#34558) 2022-12-17 03:52:56 -07:00
valgrind valgrind: add v3.20.0, mark macOS conflict (#34436) 2022-12-10 12:19:42 +01:00
vampirtrace
vardictjava
variorum
varnish-cache
varscan
vasp
vbfnlo
vc
vcftools
vcsh
vdt
veccore
vecgeom vecgeom: add new 1.2.1 version (#34240) 2022-12-02 15:56:43 -07:00
veclibfort
vecmem
vectorclass-version2
vegas2
veloc veloc: add v1.6 and dependencies (#34706) 2022-12-29 09:12:51 +01:00
velvet
velvetoptimiser
verilator
verrou
vesta
vgm
videoproto
viennarna
viewres
vifi
vigra
vim
virtest
virtualgl
virtuoso
visit
visit-cgns
visit-ffp
visit-mfem
visit-silo
visit-unv
vite
vizglow
vmatch
vmc
vmd
volk
voropp
votca votca: add v2022.1 (#34650) 2023-01-02 19:02:59 +01:00
votca-csg
votca-csg-tutorials
votca-csgapps
votca-ctp
votca-tools
votca-xtp
vpfft
vpic
vsearch
vsftpd
vt
vtable-dumper
vtk
vtk-h
vtk-m vtk-m: add v2.0.0-rc1 (#34561) 2022-12-16 10:31:10 -08:00
vvtest
w3emc new w3emc version (#34219) 2022-11-30 10:54:45 -08:00
w3m
w3nco
wannier90 wannier90: gfortran-10 support and libs property (#34278) 2022-12-05 11:43:23 +01:00
warpx WarpX 22.11, 22.12 & PICMI-Standard (#34517) 2022-12-14 13:59:16 -08:00
watch
wayland
wayland-protocols
wcs
wcslib
webbench
weechat
weighttp
wget
wgl
wgrib2
wgsim
which
whip
whizard
wi4mpi add version 3.6.4 to wi4mpi (#34565) 2022-12-16 10:26:46 -08:00
win-sdk
win-wdk
winbison
windowswmproto
wiredtiger
wireshark
wonton
wordnet
wps
wrf
wrf-io
wrk
wsmancli
wt
wtdbg2
wxparaver
wxpropgrid
wxwidgets
x11perf
x264
xabclib
xalan-c
xapian-core
xauth
xbacklight
xbiff
xbitmaps
xbraid
xcalc
xcb-demo
xcb-proto
xcb-util
xcb-util-cursor
xcb-util-errors
xcb-util-image
xcb-util-keysyms
xcb-util-renderutil
xcb-util-wm
xcb-util-xrm
xcfun
xclip
xclipboard
xclock
xcmiscproto
xcmsdb
xcompmgr
xconsole
xcursor-themes
xcursorgen
xdbedizzy
xdelta
xditview
xdm
xdmf3
xdotool
xdpyinfo
xdriinfo
xedit
xerces-c
xeus
xev
xextproto
xeyes
xf86bigfontproto
xf86dga
xf86dgaproto
xf86driproto
xf86miscproto
xf86rushproto
xf86vidmodeproto
xfd
xfindproxy
xfontsel
xforms
xfs
xfsdump
xfsinfo
xfsprogs
xfwp
xgamma
xgboost
xgc
xhmm
xhost
xineramaproto
xinit
xinput
xios
xkbcomp
xkbdata
xkbevd
xkbprint
xkbutils
xkeyboard-config
xkill
xlc
xlf
xload
xlogo
xlsatoms
xlsclients
xlsfonts
xmag
xman
xmessage
xmh
xmlf90
xmlrpc-c
xmlto
xmodmap
xmore
xnnpack XNNPACK: fix build on macOS, update deps (#34555) 2022-12-19 11:44:56 +01:00
xorg-cf-files
xorg-docs
xorg-gtest
xorg-server
xorg-sgml-doctools
xphelloworld
xplor-nih
xplsprinters
xpmem
xpr
xprehashprinterlist
xprop
xproperty
xproto
xproxymanagementprotocol
xqilla
xrandr
xrdb
xrdcl-record
xrefresh
xrootd XRootD: add checksum + patch for 5.5.1 (#34209) 2022-12-07 12:06:38 -08:00
xrx
xsbench
xscope
xsd
xsdk
xsdk-examples
xset
xsetmode
xsetpointer
xsetroot
xsimd
xsm
xstdcmap
xtensor
xtensor-blas
xtensor-python
xterm
xtl
xtrans
xtrap
xts
xvidtune
xvinfo
xwd
xwidgets
xwininfo
xwud
xxd-standalone
xxhash
xyce
xz
yafyaml Update pFunit, add gFTL, gFTL-Shared, fArgParse, pFlogger, yaFyaml (#34476) 2022-12-13 22:40:33 +01:00
yajl
yaksa
yambo
yaml-cpp
yara
yarn
yasm
ycruncher
ycsb
yoda
yorick
z3
z-checker
zabbix
zfp
zfs
zig
zip
zipkin
zlib
zlib-ng
zoltan
zookeeper
zookeeper-benchmark
zopfli
zpares
zsh
zstd
zstr
zziplib