31 lines
1.2 KiB
Python
31 lines
1.2 KiB
Python
# Copyright 2013-2021 Lawrence Livermore National Security, LLC and other
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# Spack Project Developers. See the top-level COPYRIGHT file for details.
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#
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# SPDX-License-Identifier: (Apache-2.0 OR MIT)
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from spack import *
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class PyGffutils(PythonPackage):
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"""GFF and GTF file manipulation and interconversion
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gffutils is a Python package for working with and manipulating the GFF and
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GTF format files typically used for genomic annotations. Files are loaded
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into a sqlite3 database, allowing much more complex manipulation of
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hierarchical features (e.g., genes, transcripts, and exons) than is
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possible with plain-text methods alone."""
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homepage = "https://github.com/daler/gffutils"
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pypi = "gffutils/gffutils-0.10.1.tar.gz"
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maintainers = ['dorton21']
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version('0.10.1', sha256='a8fc39006d7aa353147238160640e2210b168f7849cb99896be3fc9441e351cb')
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depends_on('py-setuptools', type='build')
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depends_on('py-pyfaidx@0.5.5.2:', type=('build', 'run'))
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depends_on('py-six@1.12.0:', type=('build', 'run'))
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depends_on('py-argh@0.26.2:', type=('build', 'run'))
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depends_on('py-argcomplete@1.9.4:', type=('build', 'run'))
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depends_on('py-simplejson', type=('build', 'run'))
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