32 lines
1.0 KiB
Python
32 lines
1.0 KiB
Python
# Copyright Spack Project Developers. See COPYRIGHT file for details.
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#
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# SPDX-License-Identifier: (Apache-2.0 OR MIT)
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from spack.package import *
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class Cleaveland4(Package):
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"""CleaveLand4: Analysis of degradome data to find sliced miRNA and siRNA
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targets"""
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homepage = "https://github.com/MikeAxtell/CleaveLand4"
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url = "https://github.com/MikeAxtell/CleaveLand4/archive/v4.4.tar.gz"
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license("GPL-3.0-or-later")
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version("4.5", sha256="d0ad584a8bc2391cdee5f6279b2351f7db972362669467564e6bd3f94dcd9dd1")
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version("4.4", sha256="bf7fe6ad730ea2bfb2e0c0f863734f189073a69b1754532012f1261b368b24e7")
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depends_on("perl", type=("build", "run"))
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depends_on("perl-math-cdf", type=("build", "run"))
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depends_on("bowtie")
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depends_on("viennarna")
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depends_on("r", type=("build", "run"))
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depends_on("samtools")
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def install(self, spec, prefix):
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mkdirp(prefix.bin)
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install("CleaveLand4.pl", prefix.bin)
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with working_dir("GSTAr_v1-0"):
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install("GSTAr.pl", prefix.bin)
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