52 lines
2.6 KiB
Python
52 lines
2.6 KiB
Python
# Copyright 2013-2020 Lawrence Livermore National Security, LLC and other
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# Spack Project Developers. See the top-level COPYRIGHT file for details.
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#
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# SPDX-License-Identifier: (Apache-2.0 OR MIT)
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from spack import *
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class RReportingtools(RPackage):
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"""Tools for making reports in various formats.
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The ReportingTools software package enables users to easily display
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reports of analysis results generated from sources such as microarray
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and sequencing data. The package allows users to create HTML pages that
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may be viewed on a web browser such as Safari, or in other formats
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readable by programs such as Excel. Users can generate tables with
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sortable and filterable columns, make and display plots, and link table
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entries to other data sources such as NCBI or larger plots within the
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HTML page. Using the package, users can also produce a table of contents
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page to link various reports together for a particular project that can
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be viewed in a web browser. For more examples, please visit our site:
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http:// research-pub.gene.com/ReportingTools."""
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homepage = "https://bioconductor.org/packages/ReportingTools"
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git = "https://git.bioconductor.org/packages/ReportingTools.git"
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version('2.24.0', commit='d114c658affba9b682a37b4e2caf4341cf8da6cf')
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version('2.22.1', commit='dce6af6c6a1cddff077fe61368f2c13e5a0e7bab')
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version('2.20.0', commit='77e14ae13fdc16654300852dfd94e6cef58009da')
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version('2.17.3', commit='b2e379cd5b813d8ccca37ec25f0660deec943622')
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version('2.16.0', commit='b1aa0ea302da7f2993ce8087b1d09c11ddf03663')
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depends_on('r-knitr', type=('build', 'run'))
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depends_on('r-biobase', type=('build', 'run'))
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depends_on('r-hwriter', type=('build', 'run'))
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depends_on('r-category', type=('build', 'run'))
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depends_on('r-gostats', type=('build', 'run'))
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depends_on('r-limma@3.17.5:', type=('build', 'run'))
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depends_on('r-lattice', type=('build', 'run'))
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depends_on('r-annotationdbi', type=('build', 'run'))
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depends_on('r-edger', type=('build', 'run'))
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depends_on('r-annotate', type=('build', 'run'))
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depends_on('r-pfam-db', type=('build', 'run'))
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depends_on('r-gseabase', type=('build', 'run'))
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depends_on('r-biocgenerics@0.1.6:', type=('build', 'run'))
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depends_on('r-xml', type=('build', 'run'))
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depends_on('r-r-utils', type=('build', 'run'))
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depends_on('r-deseq2@1.3.41:', type=('build', 'run'))
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depends_on('r-ggplot2', type=('build', 'run'))
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depends_on('r-ggbio', type=('build', 'run'))
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depends_on('r-iranges', type=('build', 'run'))
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