35 lines
1.5 KiB
Python
35 lines
1.5 KiB
Python
# Copyright 2013-2022 Lawrence Livermore National Security, LLC and other
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# Spack Project Developers. See the top-level COPYRIGHT file for details.
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#
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# SPDX-License-Identifier: (Apache-2.0 OR MIT)
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from spack import *
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class RAffyplm(RPackage):
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"""Methods for fitting probe-level models.
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A package that extends and improves the functionality of the base affy
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package. Routines that make heavy use of compiled code for speed.
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Central focus is on implementation of methods for fitting probe-level
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models and tools using these models. PLM based quality assessment
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tools."""
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bioc = "affyPLM"
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version('1.70.0', commit='64abfec92b347aa340b54a8c7b2fbd524fe9c312')
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version('1.66.0', commit='f0780c3d0e9dccaff83861b98beb5c1d324c4399')
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version('1.60.0', commit='b11e377d6af3fd0f28aba8195ebf171003da1a9d')
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version('1.58.0', commit='32764c7691d9a72a301d50042a8844112887a1c8')
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version('1.56.0', commit='13dfc558281af9a177d4d592c34cf7ace629af0e')
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version('1.54.0', commit='09cf5f6e01dd2d0aae3e9ddab27301f04bfd645c')
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version('1.52.1', commit='e8613a6018c4ee58045df6bf19128844f50a1f43')
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depends_on('r@2.6.0:', type=('build', 'run'))
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depends_on('r-biocgenerics@0.3.2:', type=('build', 'run'))
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depends_on('r-affy@1.11.0:', type=('build', 'run'))
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depends_on('r-biobase@2.17.8:', type=('build', 'run'))
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depends_on('r-gcrma', type=('build', 'run'))
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depends_on('r-preprocesscore@1.5.1:', type=('build', 'run'))
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depends_on('r-zlibbioc', type=('build', 'run'))
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