55 lines
2.9 KiB
Python
55 lines
2.9 KiB
Python
# Copyright 2013-2021 Lawrence Livermore National Security, LLC and other
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# Spack Project Developers. See the top-level COPYRIGHT file for details.
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#
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# SPDX-License-Identifier: (Apache-2.0 OR MIT)
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from spack import *
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class RRstan(RPackage):
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"""R Interface to Stan
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User-facing R functions are provided to parse, compile, test, estimate,
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and analyze Stan models by accessing the header-only Stan library provided
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by the 'StanHeaders' package. The Stan project develops a probabilistic
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programming language that implements full Bayesian statistical inference
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via Markov Chain Monte Carlo, rough Bayesian inference via variational
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approximation, and (optionally penalized) maximum likelihood estimation via
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optimization. In all three cases, automatic differentiation is used to
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quickly and accurately evaluate gradients without burdening the user with
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the need to derive the partial derivatives."""
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homepage = "http://mc-stan.org/"
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url = "https://cloud.r-project.org/src/contrib/rstan_2.10.1.tar.gz"
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list_url = "https://cloud.r-project.org/src/contrib/Archive/rstan"
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version('2.21.2', sha256='e30e04d38a612e2cb3ac69b53eaa19f7ede8b3548bf82f7892a2e9991d46054a')
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version('2.19.2', sha256='31e4ceb9c327cd62873225097ffa538c2ac4cb0547c52271e52e4c7652d508da')
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version('2.18.2', sha256='4d75dad95610d5a1d1c89a4ddbaf4326462e4ffe0ad28aed2129f2d9292e70ff')
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version('2.17.2', sha256='a7b197e6e42f8f0c302da9205afc19a0261eaf6af1425854303d2ce6cbd36729')
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version('2.10.1', sha256='4d2040742607f8675633c6b8c0a2e810f2fe3077f9242b1edfd42642613a8294')
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depends_on('r+X', type=('build', 'run'))
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depends_on('r@3.0.2:', type=('build', 'run'))
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depends_on('r@3.4.0:', when='@2.18.1:', type=('build', 'run'))
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depends_on('r-stanheaders@2.18.1:', type=('build', 'run'))
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depends_on('r-stanheaders@2.21.0:', when='@2.21.2:', type=('build', 'run'))
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depends_on('r-ggplot2@2.0.0:', type=('build', 'run'))
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depends_on('r-ggplot2@3.0.0:', when='@2.21.2:', type=('build', 'run'))
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depends_on('r-inline', type=('build', 'run'))
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depends_on('r-gridextra@2.0.0:', type=('build', 'run'))
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depends_on('r-rcpp@0.12.0:', type=('build', 'run'))
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depends_on('r-rcppparallel@5.0.1:', when='@2.21.2:', type=('build', 'run'))
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depends_on('r-loo@2.0.0:', when='@2.18:', type=('build', 'run'))
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depends_on('r-loo@2.3.0:', when='@2.21.2:', type=('build', 'run'))
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depends_on('r-pkgbuild', when='@2.18:', type=('build', 'run'))
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depends_on('r-withr', when='@2.21.2:', type=('build', 'run'))
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depends_on('r-v8', when='@2.21.2:', type=('build', 'run'))
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depends_on('r-rcppeigen@0.3.3.3.0:', type=('build', 'run'))
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depends_on('r-bh@1.69.0:', type=('build', 'run'))
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depends_on('r-bh@1.72.0-2:', when='@2.21.2:', type=('build', 'run'))
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depends_on('gmake', type='build')
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depends_on('pandoc', type='build')
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conflicts('%gcc@:4.9', when='@2.18:')
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