50df071ad9
* Remove fake URLs from Spack * Ignore long lines for URLs that start with ftp: * Preliminary changes to version regexes * New redesign of version regexes * Allow letters in version-only * Fix detection of versions that end in Final * Rearrange a few regexes and add examples * Add tests for common download repositories * Add test cases for common tarball naming schemes * Finalize version regexes * spack url test -> spack url summary * Clean up comments * Rearrange suffix checks * Use query strings for name detection * Remove no longer necessary url_for_version functions * Strip off extraneous information after package name * Add one more test * Dot in square brackets does not need to be escaped * Move renaming outside of parse_name_offset * Fix versions for a couple more packages * Fix flake8 and doc tests * Correctly parse Python, Lua, and Bio++ package names * Use effective URLs for mfem * Add checksummed version to mitos * Remove url_for_version from STAR-CCM+ package * Revert changes to version numbers with underscores and dashes * Fix name detection for tbb * Correctly parse Ruby gems * Reverted mfem back to shortened URLs. * Updated instructions for better security * Remove preferred=True from newest version * Add tests for new `spack url list` flags * Add tests for strip_name_suffixes * Add unit tests for version separators * Fix bugs related to parseable name but in parseable version * Remove dead code, update docstring * Ignore 'binary' at end of version string * Remove platform from version * Flip libedit version numbers * Re-support weird NCO alpha/beta versions * Rebase and remove one new fake URL * Add / to beginning of regex to avoid picking up similarly named packages * Ignore weird tar versions * Fix bug in url parse --spider when no versions found * Less strict version matching for spack versions * Don't rename Python packages * Be a little more selective, version must begin with a digit * Re-add fake URLs * Fix up several other packages * Ignore more file endings * Add parsing support for Miniconda * Update tab completion * XFAILS are now PASSES for 2 web tests
107 lines
4.2 KiB
Python
107 lines
4.2 KiB
Python
##############################################################################
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# Copyright (c) 2013-2016, Lawrence Livermore National Security, LLC.
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# Produced at the Lawrence Livermore National Laboratory.
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#
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# This file is part of Spack.
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# Created by Todd Gamblin, tgamblin@llnl.gov, All rights reserved.
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# LLNL-CODE-647188
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#
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# For details, see https://github.com/llnl/spack
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# Please also see the LICENSE file for our notice and the LGPL.
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#
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# This program is free software; you can redistribute it and/or modify
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# it under the terms of the GNU Lesser General Public License (as
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# published by the Free Software Foundation) version 2.1, February 1999.
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#
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# This program is distributed in the hope that it will be useful, but
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# WITHOUT ANY WARRANTY; without even the IMPLIED WARRANTY OF
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# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the terms and
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# conditions of the GNU Lesser General Public License for more details.
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#
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# You should have received a copy of the GNU Lesser General Public
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# License along with this program; if not, write to the Free Software
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# Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
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##############################################################################
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from spack import *
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import os
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class Ferret(Package):
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"""Ferret is an interactive computer visualization and analysis environment
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designed to meet the needs of oceanographers and meteorologists
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analyzing large and complex gridded data sets."""
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homepage = "http://ferret.pmel.noaa.gov/Ferret/home"
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url = "ftp://ftp.pmel.noaa.gov/ferret/pub/source/fer_source.v696.tar.gz"
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version('6.96', '51722027c864369f41bab5751dfff8cc')
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depends_on("hdf5~mpi~fortran")
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depends_on("netcdf~mpi")
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depends_on("netcdf-fortran")
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depends_on("readline")
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depends_on("zlib")
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def url_for_version(self, version):
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return "ftp://ftp.pmel.noaa.gov/ferret/pub/source/fer_source.v{0}.tar.gz".format(
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version.joined)
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def patch(self):
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hdf5_prefix = self.spec['hdf5'].prefix
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netcdff_prefix = self.spec['netcdf-fortran'].prefix
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readline_prefix = self.spec['readline'].prefix
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libz_prefix = self.spec['zlib'].prefix
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filter_file(r'^BUILDTYPE.+',
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'BUILDTYPE = x86_64-linux',
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'FERRET/site_specific.mk')
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filter_file(r'^INSTALL_FER_DIR.+',
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'INSTALL_FER_DIR = %s' % self.spec.prefix,
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'FERRET/site_specific.mk')
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filter_file(r'^HDF5_DIR.+',
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'HDF5_DIR = %s' % hdf5_prefix,
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'FERRET/site_specific.mk')
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filter_file(r'^NETCDF4_DIR.+',
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'NETCDF4_DIR = %s' % netcdff_prefix,
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'FERRET/site_specific.mk')
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filter_file(r'^READLINE_DIR.+',
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'READLINE_DIR = %s' % readline_prefix,
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'FERRET/site_specific.mk')
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filter_file(r'^LIBZ_DIR.+',
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'LIBZ_DIR = %s' % libz_prefix,
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'FERRET/site_specific.mk')
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filter_file(r'^JAVA_HOME.+',
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' ',
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'FERRET/site_specific.mk')
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filter_file(r'-lm',
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'-lgfortran -lm',
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'FERRET/platform_specific.mk.x86_64-linux')
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def install(self, spec, prefix):
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hdf5_prefix = spec['hdf5'].prefix
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netcdff_prefix = spec['netcdf-fortran'].prefix
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netcdf_prefix = spec['netcdf'].prefix
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libz_prefix = spec['zlib'].prefix
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ln = which('ln')
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ln('-sf',
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hdf5_prefix + '/lib',
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hdf5_prefix + '/lib64')
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ln('-sf',
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netcdff_prefix + '/lib',
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netcdff_prefix + '/lib64')
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ln('-sf',
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netcdf_prefix + '/lib/libnetcdf.a',
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netcdff_prefix + '/lib/libnetcdf.a')
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ln('-sf',
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netcdf_prefix + '/lib/libnetcdf.la',
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netcdff_prefix + '/lib/libnetcdf.la')
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ln('-sf',
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libz_prefix + '/lib',
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libz_prefix + '/lib64')
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os.environ['LDFLAGS'] = '-lquadmath'
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with working_dir('FERRET', create=False):
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os.environ['LD_X11'] = '-L/usr/lib/X11 -lX11'
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os.environ['HOSTTYPE'] = 'x86_64-linux'
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make(parallel=False)
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make("install")
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