38 lines
1.7 KiB
Python
38 lines
1.7 KiB
Python
# Copyright 2013-2023 Lawrence Livermore National Security, LLC and other
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# Spack Project Developers. See the top-level COPYRIGHT file for details.
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#
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# SPDX-License-Identifier: (Apache-2.0 OR MIT)
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from spack.package import *
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class RAffyplm(RPackage):
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"""Methods for fitting probe-level models.
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A package that extends and improves the functionality of the base affy
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package. Routines that make heavy use of compiled code for speed.
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Central focus is on implementation of methods for fitting probe-level
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models and tools using these models. PLM based quality assessment
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tools."""
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bioc = "affyPLM"
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version("1.76.0", commit="45557df5a32f56aa5240439737c5718738fb4c27")
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version("1.74.0", commit="5f76ef92e69deabc19c5395eaec4adb85c66b63d")
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version("1.72.0", commit="394c0a8e213f188d0b1d01e20516df8bf1bc5c09")
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version("1.70.0", commit="64abfec92b347aa340b54a8c7b2fbd524fe9c312")
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version("1.66.0", commit="f0780c3d0e9dccaff83861b98beb5c1d324c4399")
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version("1.60.0", commit="b11e377d6af3fd0f28aba8195ebf171003da1a9d")
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version("1.58.0", commit="32764c7691d9a72a301d50042a8844112887a1c8")
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version("1.56.0", commit="13dfc558281af9a177d4d592c34cf7ace629af0e")
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version("1.54.0", commit="09cf5f6e01dd2d0aae3e9ddab27301f04bfd645c")
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version("1.52.1", commit="e8613a6018c4ee58045df6bf19128844f50a1f43")
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depends_on("r@2.6.0:", type=("build", "run"))
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depends_on("r-biocgenerics@0.3.2:", type=("build", "run"))
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depends_on("r-affy@1.11.0:", type=("build", "run"))
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depends_on("r-biobase@2.17.8:", type=("build", "run"))
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depends_on("r-gcrma", type=("build", "run"))
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depends_on("r-preprocesscore@1.5.1:", type=("build", "run"))
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depends_on("r-zlibbioc", type=("build", "run"))
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