23 lines
891 B
Python
23 lines
891 B
Python
# Copyright 2013-2024 Lawrence Livermore National Security, LLC and other
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# Spack Project Developers. See the top-level COPYRIGHT file for details.
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#
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# SPDX-License-Identifier: (Apache-2.0 OR MIT)
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from spack.package import *
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class RTxdbHsapiensUcscHg18Knowngene(RPackage):
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"""Annotation package for TxDb object(s).
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Exposes an annotation databases generated from UCSC by exposing these as
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TxDb objects"""
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# This is a bioconductor package but ther is no available git repo
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bioc = "TxDb.Hsapiens.UCSC.hg18.knownGene"
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url = "https://bioconductor.org/packages/release/data/annotation/src/contrib/TxDb.Hsapiens.UCSC.hg18.knownGene_3.2.2.tar.gz"
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version("3.2.2", sha256="bc9ca40b4eab87f5ca64a4b876d42502b9b8e9f5983d745bfe0ee349d97b69fa")
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depends_on("r-genomicfeatures@1.21.30:", type=("build", "run"))
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depends_on("r-annotationdbi", type=("build", "run"))
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