43 lines
2.2 KiB
Python
43 lines
2.2 KiB
Python
# Copyright 2013-2024 Lawrence Livermore National Security, LLC and other
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# Spack Project Developers. See the top-level COPYRIGHT file for details.
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#
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# SPDX-License-Identifier: (Apache-2.0 OR MIT)
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from spack.package import *
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class RNimble(RPackage):
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"""MCMC, Particle Filtering, and Programmable Hierarchical Modeling.
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A system for writing hierarchical statistical models largely compatible
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with 'BUGS' and 'JAGS', writing nimbleFunctions to operate models and do
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basic R-style math, and compiling both models and nimbleFunctions via
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custom-generated C++. 'NIMBLE' includes default methods for MCMC, Monte
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Carlo Expectation Maximization, and some other tools. The nimbleFunction
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system makes it easy to do things like implement new MCMC samplers from R,
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customize the assignment of samplers to different parts of a model from R,
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and compile the new samplers automatically via C++ alongside the samplers
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'NIMBLE' provides. 'NIMBLE' extends the 'BUGS'/'JAGS' language by making it
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extensible: New distributions and functions can be added, including as
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calls to external compiled code. Although most people think of MCMC as the
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main goal of the 'BUGS'/'JAGS' language for writing models, one can use
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'NIMBLE' for writing arbitrary other kinds of model-generic algorithms as
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well. A full User Manual is available at <https://r-nimble.org>."""
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cran = "nimble"
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license("BSD-3-Clause OR GPL-2.0-or-later")
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version("0.13.1", sha256="dc70caab64a8a4e44fb13fa6d67f6f2a0453fa684669e24718758bb2a8cf8530")
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version("0.12.2", sha256="2af7a3ab159a7f0b3b4b139da1db45be4b602f2c0e115cb0403b060ab0101a1b")
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version("0.12.1", sha256="3520f3212a48c8cbe08a6a8e57b3a72180594f7c09f647d1daf417c9857867d8")
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version("0.10.1", sha256="11e248fda442f233c3590640efd9381c9b4b2e6fb66dce45a3391db03b70e702")
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version("0.9.1", sha256="ad5e8a171193cb0172e68bf61c4f94432c45c131a150101ad1c5c7318c335757")
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version("0.9.0", sha256="ebc28fadf933143eea73900cacaf96ff81cb3c2d607405016062b7e93afa5611")
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depends_on("r@3.1.2:", type=("build", "run"))
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depends_on("r-igraph", type=("build", "run"))
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depends_on("r-coda", type=("build", "run"))
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depends_on("r-r6", type=("build", "run"))
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depends_on("gmake", type="build")
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