31 lines
1.2 KiB
Python
31 lines
1.2 KiB
Python
# Copyright Spack Project Developers. See COPYRIGHT file for details.
|
|
#
|
|
# SPDX-License-Identifier: (Apache-2.0 OR MIT)
|
|
|
|
|
|
from spack.package import *
|
|
|
|
|
|
class PyPyseer(PythonPackage):
|
|
"""Sequence Elements Enrichment Analysis (SEER), python implementation"""
|
|
|
|
homepage = "https://pyseer.readthedocs.io/en/master/"
|
|
|
|
# Not availible on PyPI
|
|
url = "https://github.com/mgalardini/pyseer/releases/download/1.3.11/pyseer-1.3.11.tar.gz"
|
|
|
|
version("1.3.11", sha256="384313a3a14b92f873eaad53f77a319d90b584b9253785a7ca1dfc7d9220c91e")
|
|
|
|
depends_on("py-setuptools", type="build")
|
|
depends_on("py-numpy", type=("build", "run"))
|
|
depends_on("py-scipy", type=("build", "run"))
|
|
depends_on("py-pandas", type=("build", "run"))
|
|
depends_on("py-statsmodels@0.10.0:", type=("build", "run"))
|
|
depends_on("py-scikit-learn", type=("build", "run"))
|
|
depends_on("py-pysam", type=("build", "run"))
|
|
depends_on("py-dendropy", type=("build", "run"))
|
|
depends_on("py-matplotlib", type=("build", "run"))
|
|
depends_on("py-pybedtools", type=("build", "run"))
|
|
depends_on("py-tqdm", type=("build", "run"))
|
|
depends_on("py-glmnet-python@1.0.2", type=("build", "run"))
|