48 lines
2.1 KiB
Python
48 lines
2.1 KiB
Python
##############################################################################
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# Copyright (c) 2013-2018, Lawrence Livermore National Security, LLC.
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# Produced at the Lawrence Livermore National Laboratory.
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#
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# This file is part of Spack.
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# Created by Todd Gamblin, tgamblin@llnl.gov, All rights reserved.
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# LLNL-CODE-647188
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#
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# For details, see https://github.com/spack/spack
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# Please also see the NOTICE and LICENSE files for our notice and the LGPL.
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#
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# This program is free software; you can redistribute it and/or modify
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# it under the terms of the GNU Lesser General Public License (as
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# published by the Free Software Foundation) version 2.1, February 1999.
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#
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# This program is distributed in the hope that it will be useful, but
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# WITHOUT ANY WARRANTY; without even the IMPLIED WARRANTY OF
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# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the terms and
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# conditions of the GNU Lesser General Public License for more details.
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#
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# You should have received a copy of the GNU Lesser General Public
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# License along with this program; if not, write to the Free Software
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# Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
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##############################################################################
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from spack import *
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class Structure(MakefilePackage):
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"""Structure is a free software package for using multi-locus genotype
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data to investigate population structure."""
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homepage = "http://web.stanford.edu/group/pritchardlab/structure.html"
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url = "http://web.stanford.edu/group/pritchardlab/structure_software/release_versions/v2.3.4/structure_kernel_source.tar.gz"
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version('2.3.4', '4e0591678cdbfe79347d272b5dceeda1')
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depends_on('jdk', type=('build', 'run'))
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def url_for_version(self, version):
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url = "http://web.stanford.edu/group/pritchardlab/structure_software/release_versions/v{0}/structure_kernel_source.tar.gz"
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return url.format(version)
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def install(self, spec, prefix):
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mkdirp(prefix.bin)
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install('structure', prefix.bin)
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install('mainparams', prefix.bin)
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install('extraparams', prefix.bin)
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