27 lines
1.1 KiB
Python
27 lines
1.1 KiB
Python
# Copyright 2013-2019 Lawrence Livermore National Security, LLC and other
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# Spack Project Developers. See the top-level COPYRIGHT file for details.
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#
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# SPDX-License-Identifier: (Apache-2.0 OR MIT)
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from spack import *
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class RSimpleaffy(RPackage):
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"""Provides high level functions for reading Affy .CEL files,
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phenotypic data, and then computing simple things with it, such as
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t-tests, fold changes and the like. Makes heavy use of the affy
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library. Also has some basic scatter plot functions and mechanisms
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for generating high resolution journal figures..."""
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homepage = "http://bioconductor.org/packages/simpleaffy/"
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git = "https://git.bioconductor.org/packages/simpleaffy.git"
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version('2.52.0', commit='f2b43fb9b8e6fa4c03fe28b4efb3144a0a42a385')
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depends_on('r-biocgenerics', type=('build', 'run'))
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depends_on('r-biobase', type=('build', 'run'))
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depends_on('r-affy', type=('build', 'run'))
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depends_on('r-genefilter', type=('build', 'run'))
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depends_on('r-gcrma', type=('build', 'run'))
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depends_on('r@3.4.0:3.4.9', when='@2.52.0')
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